Cow genome map
| Conread name: | mE7-MI-P-E7-aia-f-03-1-UM.s1 |
| Conread position: | 2-337 |
| Cow position: | chr1:8907300-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 49 |
| Conread position: | 6-225 |
| Cow position: | chr1:53020861-53020645 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 212, 48 |
| Conread position: | 54-374 |
| Cow position: | chr1:160689-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 24 |
| Conread position: | 371-503 |
| Cow position: | chr1:8906742-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 400-506 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 439-518 |
| Cow position: | chr1:47480032-47479955 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-441 |
| Cow position: | chr10:14623013-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 356-517 |
| Cow position: | chr10:40314915-40314758 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-503 |
| Cow position: | chr11:67284465-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 47 |
| Conread position: | 178-512 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 222-434 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 98-506 |
| Cow position: | chr15:2109183-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 113 |
| Conread position: | 2-157 |
| Cow position: | chr18:1650731-1650577 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-350 |
| Cow position: | chr19:15558694-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 206 |
| Conread position: | 167-518 |
| Cow position: | chr19:42922990-42922638 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 89-518 |
| Cow position: | chr2:1241707-1242128 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 214 |
| Conread position: | 2-414 |
| Cow position: | chr22:35737153-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 227-504 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 382-503 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 117 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 269-493 |
| Cow position: | chr23:5423183-5422961 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 215-509 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 286-515 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 3-507 |
| Cow position: | chr27:30549812-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 47 |
| Conread position: | 35-509 |
| Cow position: | chr27:14706810-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 15 |
| Conread position: | 379-490 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 2-437 |
| Cow position: | chr3:2885849-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 53 |
| Conread position: | 2-503 |
| Cow position: | chr3:17723070-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 483, 48 |
| Conread position: | 85-431 |
| Cow position: | chr3:54640533-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 119, 139 |
| Conread position: | 218-481 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-103 |
| Cow position: | chr5:25252816-25252916 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-511 |
| Cow position: | chr5:62310888-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-515 |
| Cow position: | chr5:2002720-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 98-511 |
| Cow position: | chr5:61090913-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 358-517 |
| Cow position: | chr6:55004366-55004211 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-121 |
| Cow position: | chr7:63517289-63517173 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-503 |
| Cow position: | chr7:63142753-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 46 |
| Conread position: | 4-516 |
| Cow position: | chr7:65486706-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 46 |
| Conread position: | 2-518 |
| Cow position: | chr9:24247574-24247058 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 48 |