Cow genome map
| Conread name: | mH0-MI-P-HO-aga-d-10-1-UM.s1 |
| Conread position: | 12-248 |
| Cow position: | chr1:98864362-98864613 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-232 |
| Cow position: | chr1:61737743-61737975 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 20-250 |
| Cow position: | chr1:38396944-38396713 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 12-216 |
| Cow position: | chr10:11821165-11820951 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 59, 193 |
| Conread position: | 14-198 |
| Cow position: | chr10:39879972-39880153 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 17-250 |
| Cow position: | chr10:24977366-24977606 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-238 |
| Cow position: | chr11:36713076-36713320 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 12-252 |
| Cow position: | chr11:13066643-13066895 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 235 |
| Conread position: | 20-250 |
| Cow position: | chr14:34043666-34043902 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 199 |
| Conread position: | 15-238 |
| Cow position: | chr15:30810967-30810742 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 58-248 |
| Cow position: | chr15:498676-498484 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 58-256 |
| Cow position: | chr18:4884834-4885031 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 12-238 |
| Cow position: | chr22:297612-297851 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 12-258 |
| Cow position: | chr22:8875933-8875676 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 14-220 |
| Cow position: | chr22:8148148-8148356 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 18-228 |
| Cow position: | chr22:36552130-36552352 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 12-258 |
| Cow position: | chr28:10229846-10230112 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 189 |
| Conread position: | 65-244 |
| Cow position: | chr29:8062228-8062405 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 12-238 |
| Cow position: | chr3:18728514-18728757 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 12-248 |
| Cow position: | chr4:19251620-19251396 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 12-249 |
| Cow position: | chr4:1496326-1496575 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 12, 125 |
| Conread position: | 12-255 |
| Cow position: | chr4:4176855-4176616 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 43-240 |
| Cow position: | chr5:58054971-58055174 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 13-248 |
| Cow position: | chr6:31637249-31637497 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 58-253 |
| Cow position: | chr6:10631203-10631010 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 17-249 |
| Cow position: | chr7:26852049-26851811 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 12-249 |
| Cow position: | chr8:38585735-38585978 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 187 |
| Conread position: | 20-248 |
| Cow position: | chr9:3726896-3726649 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 12-238 |
| Cow position: | chrX:24112693-24112939 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 12-258 |
| Cow position: | chrX:29814987-29814717 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |