Cow genome map
| Conread name: | mO3-MI-P-O3-aaz-g-07-1-UM.s1 |
| Conread position: | 3-197 |
| Cow position: | chr1:58914241-58914436 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 157, 180 |
| Conread position: | 12-199 |
| Cow position: | chr1:670702-670889 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 8-198 |
| Cow position: | chr10:23112097-23112286 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 34-199 |
| Cow position: | chr11:22463568-22463403 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 132, 105 |
| Conread position: | 3-185 |
| Cow position: | chr13:38970788-38970971 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 3-197 |
| Cow position: | chr13:48321148-48321339 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 128 |
| Conread position: | 8-198 |
| Cow position: | chr14:38536718-38536909 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 8-201 |
| Cow position: | chr14:40015917-40016102 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 8-203 |
| Cow position: | chr14:19995848-19996043 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 149, 125 |
| Conread position: | 3-202 |
| Cow position: | chr15:50670645-50670435 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 3-202 |
| Cow position: | chr16:17037429-17037229 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 5-202 |
| Cow position: | chr16:50937725-50937922 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 160, 130 |
| Conread position: | 8-201 |
| Cow position: | chr16:1174720-1174526 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 8-202 |
| Cow position: | chr16:2660421-2660222 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-194 |
| Cow position: | chr18:35368546-35368358 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 8-197 |
| Cow position: | chr18:42854504-42854314 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 3-201 |
| Cow position: | chr19:27613873-27613674 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 3-203 |
| Cow position: | chr19:55282071-55282267 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 46 |
| Conread position: | 8-167 |
| Cow position: | chr19:4571748-4571585 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-197 |
| Cow position: | chr19:34431420-34431608 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 8-203 |
| Cow position: | chr19:33521118-33520921 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-200 |
| Cow position: | chr2:31700-31502 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 8-200 |
| Cow position: | chr20:14849267-14849074 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 8-203 |
| Cow position: | chr20:25382397-25382201 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 3-197 |
| Cow position: | chr21:37511826-37512021 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 3-203 |
| Cow position: | chr21:29806655-29806856 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 8-151 |
| Cow position: | chr21:14826502-14826363 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-203 |
| Cow position: | chr22:4555644-4555847 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 3-203 |
| Cow position: | chr22:47420806-47420614 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 122 |
| Conread position: | 7-203 |
| Cow position: | chr22:31400171-31400368 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 8-203 |
| Cow position: | chr22:8529257-8529453 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 90-199 |
| Cow position: | chr24:39781614-39781724 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-200 |
| Cow position: | chr25:32192388-32192194 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 157, 129 |
| Conread position: | 8-173 |
| Cow position: | chr28:18384755-18384922 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 17-185 |
| Cow position: | chr29:18357311-18357140 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 17-201 |
| Cow position: | chr29:17429506-17429689 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 116 |
| Conread position: | 3-168 |
| Cow position: | chr3:60258517-60258352 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-178 |
| Cow position: | chr3:17991059-17990891 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 3-198 |
| Cow position: | chr3:44609757-44609561 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 52-201 |
| Cow position: | chr4:3983461-3983311 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 132 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 8-145 |
| Cow position: | chr5:16929399-16929536 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-203 |
| Cow position: | chr5:22669188-22669384 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 8-203 |
| Cow position: | chr5:39902839-39902643 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 13-195 |
| Cow position: | chr5:45579298-45579123 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 152, 46 |
| Conread position: | 18-123 |
| Cow position: | chr5:40273864-40273759 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-198 |
| Cow position: | chr5:40273770-40273663 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-192 |
| Cow position: | chr6:65309825-65309633 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-105 |
| Cow position: | chr6:35322874-35322777 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-199 |
| Cow position: | chr6:42390375-42390542 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 43-199 |
| Cow position: | chr6:50589838-50589995 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 8-196 |
| Cow position: | chr7:5319179-5319366 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 8-197 |
| Cow position: | chr7:29782333-29782141 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 12-197 |
| Cow position: | chr7:39100705-39100521 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 153, 55 |
| Conread position: | 12-201 |
| Cow position: | chr7:39149241-39149429 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 153, 55 |
| Conread position: | 3-203 |
| Cow position: | chr8:61568383-61568584 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 25-176 |
| Cow position: | chr8:31422443-31422289 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 52-200 |
| Cow position: | chr8:52972918-52973062 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 3-192 |
| Cow position: | chr9:59192472-59192664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 132, 61 |