Cow genome map
| Conread name: | rcbl0_007778.y1 |
| Conread position: | 128-409 |
| Cow position: | chr1:20003908-20003629 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 193 |
| Conread position: | 162-431 |
| Cow position: | chr1:72996449-72996696 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 162-436 |
| Cow position: | chr1:40510818-40510538 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 162-442 |
| Cow position: | chr1:76702226-76701934 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 58, 140 |
| Conread position: | 162-448 |
| Cow position: | chr1:27989996-27989700 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 210-438 |
| Cow position: | chr1:82383889-82384116 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 159-438 |
| Cow position: | chr10:40642393-40642677 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 305-449 |
| Cow position: | chr10:2467272-2467128 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 162-427 |
| Cow position: | chr11:30121555-30121280 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 163-427 |
| Cow position: | chr11:27834653-27834390 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 163-438 |
| Cow position: | chr11:20805726-20805456 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 136 |
| Conread position: | 163-427 |
| Cow position: | chr12:22593133-22593407 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 227-438 |
| Cow position: | chr12:29499740-29499536 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 162-448 |
| Cow position: | chr13:562221-561921 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 158-411 |
| Cow position: | chr14:3439261-3439000 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 178 |
| Conread position: | 188-437 |
| Cow position: | chr14:47602244-47602501 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 166-442 |
| Cow position: | chr15:17397767-17398052 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 65, 221 |
| Conread position: | 210-431 |
| Cow position: | chr15:44298753-44298538 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 36 |
| Conread position: | 243-431 |
| Cow position: | chr15:53340360-53340549 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 158-425 |
| Cow position: | chr16:30999916-31000193 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 162-448 |
| Cow position: | chr16:25455770-25455471 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 163-428 |
| Cow position: | chr16:18617436-18617170 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 101 |
| Conread position: | 231-431 |
| Cow position: | chr16:28023254-28023054 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 239-441 |
| Cow position: | chr16:25443654-25443858 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 162-438 |
| Cow position: | chr17:23721866-23722139 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 158-438 |
| Cow position: | chr18:51273632-51273359 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 182 |
| Conread position: | 158-431 |
| Cow position: | chr19:24691904-24692174 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 162-448 |
| Cow position: | chr19:5731991-5732284 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 171-448 |
| Cow position: | chr19:4388078-4388362 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 158-448 |
| Cow position: | chr2:9188142-9187838 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 227 |
| Conread position: | 162-448 |
| Cow position: | chr2:10263491-10263183 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 212 |
| Conread position: | 275-431 |
| Cow position: | chr2:46940237-46940393 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 158-448 |
| Cow position: | chr20:22696591-22696306 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 177, 86 |
| Conread position: | 163-443 |
| Cow position: | chr21:33358648-33358369 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 158-447 |
| Cow position: | chr22:40588784-40589082 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 133 |
| Conread position: | 185-438 |
| Cow position: | chr22:324751-324491 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 162-441 |
| Cow position: | chr23:29442721-29442432 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 162-438 |
| Cow position: | chr26:2349751-2349465 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 135 |
| Conread position: | 162-436 |
| Cow position: | chr27:3995515-3995237 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 120 |
| Conread position: | 162-438 |
| Cow position: | chr27:3991390-3991673 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 240 |
| Conread position: | 162-448 |
| Cow position: | chr27:26327436-26327735 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 162-436 |
| Cow position: | chr28:24621421-24621136 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 162-438 |
| Cow position: | chr28:15939164-15938890 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 157 |
| Conread position: | 162-441 |
| Cow position: | chr28:21568329-21568617 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 162-438 |
| Cow position: | chr3:27865481-27865766 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 158-438 |
| Cow position: | chr5:58550200-58550478 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 162-431 |
| Cow position: | chr5:444735-445010 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 68, 147 |
| Conread position: | 179-438 |
| Cow position: | chr5:38737032-38737295 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 50, 181 |
| Conread position: | 162-438 |
| Cow position: | chr6:51091713-51092007 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 162-444 |
| Cow position: | chr6:6162484-6162780 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 171-448 |
| Cow position: | chr6:59618439-59618715 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 158-438 |
| Cow position: | chr9:32292316-32292608 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 162-441 |
| Cow position: | chr9:3960862-3960579 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 162-448 |
| Cow position: | chr9:18507548-18507248 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 166-437 |
| Cow position: | chr9:52722707-52722979 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 157-441 |
| Cow position: | chrX:42008814-42009107 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 162-431 |
| Cow position: | chrX:11462806-11462528 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 200 |
| Conread position: | 162-438 |
| Cow position: | chrX:12308576-12308289 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |