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Cow genome map

           
Conread name:
           
rcbl0_010493.y1
        

               
Conread position:
               
2-248
               

               
Cow position:
               
chr1:7630681-7630424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 208
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr1:25119580-25119825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
26-274
               

               
Cow position:
               
chr1:84252127-84252372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
27-235
               

               
Cow position:
               
chr1:98620152-98619944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr1:2599995-2600245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr1:73933580-73933325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr1:54374511-54374758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr1:58182087-58182335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr1:99752907-99752655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr1:87830944-87830704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
37-246
               

               
Cow position:
               
chr1:86001239-86001446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
41-276
               

               
Cow position:
               
chr1:58515685-58515453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
54-275
               

               
Cow position:
               
chr1:44701113-44701326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr1:18109685-18109465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
69-264
               

               
Cow position:
               
chr1:81765743-81765940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
81-274
               

               
Cow position:
               
chr1:85400467-85400664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr10:60740449-60740198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:53794321-53794594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr10:32835336-32835067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr10:9626738-9626983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr10:6905999-6905760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr10:28527691-28527941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 216
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr10:28906090-28906339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr10:17138855-17138621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr10:20542907-20542674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
42-274
               

               
Cow position:
               
chr10:24625099-24625334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr10:18023922-18023702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr10:924410-924625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
67-259
               

               
Cow position:
               
chr10:36465797-36465983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
68-257
               

               
Cow position:
               
chr10:55888294-55888488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
80-269
               

               
Cow position:
               
chr10:30466552-30466748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr11:81337518-81337788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr11:58816980-58816716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr11:30194846-30194581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr11:69614832-69615049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr11:73839549-73839295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr11:13534208-13534458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr11:35569867-35570116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
112, 139
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr11:59801158-59800907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr11:77253028-77253278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr11:17453430-17453177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
30-265
               

               
Cow position:
               
chr11:7681324-7681085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr11:12519054-12519302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr11:35232179-35231932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr11:45839543-45839773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr11:76566808-76566583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr11:2322545-2322773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr11:30036825-30037042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr11:41049802-41050010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr11:58124397-58124191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
74-272
               

               
Cow position:
               
chr11:41102230-41102033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr12:6441183-6441438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr12:22214037-22214285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
114, 90
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr12:10402738-10402989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
75-273
               

               
Cow position:
               
chr12:14852655-14852858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
96-309
               

               
Cow position:
               
chr12:10469772-10469564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:46530091-46529810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr13:9693062-9693334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 182
               

               
Conread position:
               
28-272
               

               
Cow position:
               
chr13:1882069-1882318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr13:42896360-42896112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr13:55957316-55957062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr13:34385707-34385948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr13:12906521-12906293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr13:26073502-26073720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr13:57781368-57781581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr13:45931247-45931067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr13:34903820-34904028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr14:18128946-18128654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 188
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr14:12951434-12951182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chr14:20396174-20395929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
28-272
               

               
Cow position:
               
chr14:21919929-21920171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr14:195045-194794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr14:14277107-14276861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr14:45275135-45274918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
50-278
               

               
Cow position:
               
chr14:19459587-19459813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr14:29642388-29642170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
59-276
               

               
Cow position:
               
chr14:17770899-17771115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr14:27051914-27052117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
74-260
               

               
Cow position:
               
chr14:26496511-26496694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
112-274
               

               
Cow position:
               
chr14:24519491-24519328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr15:45501825-45502086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
187, 14
               

               
Conread position:
               
24-260
               

               
Cow position:
               
chr15:14572999-14573240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr15:5913270-5913527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr15:9436879-9436620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr15:20329101-20329358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 174
               

               
Conread position:
               
29-273
               

               
Cow position:
               
chr15:34102545-34102779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr15:29813382-29813147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
47-274
               

               
Cow position:
               
chr15:24639327-24639100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr15:6290505-6290293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr15:16039144-16038930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
71-273
               

               
Cow position:
               
chr15:19814305-19814513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr16:1652332-1652091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr16:24739436-24739169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 212
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr16:41858645-41858379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr16:24926023-24925766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr16:1223689-1223943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr16:25893476-25893227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr16:53214509-53214264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
38-273
               

               
Cow position:
               
chr16:44569658-44569887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr16:52528580-52528368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr16:29323034-29323259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
42-273
               

               
Cow position:
               
chr16:20595386-20595168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr16:44704559-44704333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
71-275
               

               
Cow position:
               
chr16:5656127-5655925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr17:21860252-21860534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 222
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr17:158832-158581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr17:31427280-31427026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chr17:23723138-23722896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
33-273
               

               
Cow position:
               
chr17:31092150-31092397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr17:39612060-39611839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr17:18315482-18315273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr17:37701394-37701228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:254641-254366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:30846286-30846559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
7, 253
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:38341758-38342035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 219
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr18:43129828-43129585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr18:54059090-54059338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr18:16437844-16437596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 127
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr18:6377307-6377040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr18:26845825-26845581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr18:39494525-39494288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr18:37874030-37874269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr18:51251415-51251173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
42-262
               

               
Cow position:
               
chr18:27466910-27466689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr18:14816944-14816719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
46-274
               

               
Cow position:
               
chr18:48300733-48300964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr18:3567178-3566962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
61-259
               

               
Cow position:
               
chr18:19634067-19633868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
72-274
               

               
Cow position:
               
chr18:14869660-14869462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
73-274
               

               
Cow position:
               
chr18:902730-902530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
77-273
               

               
Cow position:
               
chr18:25200463-25200261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr18:45400906-45400714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
100-272
               

               
Cow position:
               
chr18:39455714-39455546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr19:31280023-31279748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr19:33625332-33625080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr19:47560042-47560293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr19:41213783-41214027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr19:44035392-44035154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
38-258
               

               
Cow position:
               
chr19:40365986-40366214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
38-273
               

               
Cow position:
               
chr19:51501157-51500922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
41-272
               

               
Cow position:
               
chr19:41166912-41166677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr19:36150514-36150283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr19:39602763-39602977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
71-273
               

               
Cow position:
               
chr19:39794175-39793967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr2:84327541-84327256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr2:16334088-16333814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr2:287701-287972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr2:59441734-59441492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
27-276
               

               
Cow position:
               
chr2:8702922-8702671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
27-325
               

               
Cow position:
               
chr2:9042453-9042754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 249
               

               
Conread position:
               
30-276
               

               
Cow position:
               
chr2:43922833-43923080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr2:24432822-24432587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
38-284
               

               
Cow position:
               
chr2:18152510-18152756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
41-273
               

               
Cow position:
               
chr2:852468-852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr2:76985293-76985530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr2:44657962-44657739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr2:42733182-42732959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
68-275
               

               
Cow position:
               
chr2:26033124-26032916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
71-267
               

               
Cow position:
               
chr2:66267385-66267189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
72-274
               

               
Cow position:
               
chr2:32910205-32910003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
76-273
               

               
Cow position:
               
chr2:51442022-51442221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
83-265
               

               
Cow position:
               
chr2:16563178-16562994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:31564466-31564743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr20:36417984-36418252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr20:28822483-28822749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr20:19667299-19667044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr20:21767894-21768143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
71-273
               

               
Cow position:
               
chr20:15240366-15240568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:28006900-28007137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr21:13189969-13189687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr21:21940712-21941007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr21:14983913-14984167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr21:21027293-21027042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
25-259
               

               
Cow position:
               
chr21:26884739-26884500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr21:28872633-28872390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr21:45003318-45003072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
28-264
               

               
Cow position:
               
chr21:8274674-8274912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 181
               

               
Conread position:
               
30-278
               

               
Cow position:
               
chr21:45162339-45162590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr21:34734668-34734420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
37-275
               

               
Cow position:
               
chr21:46241700-46241941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr21:30159258-30159486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr21:31499807-31499584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
56-274
               

               
Cow position:
               
chr21:15444248-15444465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr21:4861695-4861897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
77-274
               

               
Cow position:
               
chr21:1629320-1629117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:12631155-12631423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:47528645-47528370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 244
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr22:10386073-10385787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr22:23010597-23010848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
38-268
               

               
Cow position:
               
chr22:11659214-11659439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr22:12094770-12094992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 115
               

               
Conread position:
               
57-259
               

               
Cow position:
               
chr22:27335356-27335154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
161, 143
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr22:47905979-47905758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr22:18844123-18844345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
59-273
               

               
Cow position:
               
chr22:34017073-34017289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
77, 154
               

               
Conread position:
               
59-275
               

               
Cow position:
               
chr22:28050442-28050662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
60-273
               

               
Cow position:
               
chr22:47761373-47761167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
68-273
               

               
Cow position:
               
chr22:43566888-43567095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr22:36357666-36357464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
77-275
               

               
Cow position:
               
chr22:32394391-32394194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
133-273
               

               
Cow position:
               
chr22:39704471-39704332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr23:35324557-35324830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr23:6444317-6444036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr23:24517562-24517318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr23:41476255-41476534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 248
               

               
Conread position:
               
23-256
               

               
Cow position:
               
chr23:10960612-10960379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
23-274
               

               
Cow position:
               
chr23:9215486-9215237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
206, 130
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr23:15505386-15505142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr23:15038676-15038924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
30-237
               

               
Cow position:
               
chr23:7372756-7372547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 196
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr23:35275849-35275629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr23:38969768-38969549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
69-274
               

               
Cow position:
               
chr23:8323365-8323158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr23:30186666-30186828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr24:26846830-26847112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr24:16216628-16216894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 242
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr24:29071672-29071913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr24:22912410-22912165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr24:384663-384415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:30162688-30162975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr25:24636669-24636951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 189
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr25:9979358-9979635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr25:14393657-14393903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
31-267
               

               
Cow position:
               
chr25:23845410-23845642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr25:23863944-23864184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
38-271
               

               
Cow position:
               
chr25:19074059-19073827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
40-281
               

               
Cow position:
               
chr25:14995604-14995840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
50-259
               

               
Cow position:
               
chr25:30079016-30079215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr25:22713150-22712934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr25:34334241-34334459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 6
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr25:23462771-23462563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr25:27609571-27609359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr25:15005468-15005264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
155, 128
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr25:17716995-17716796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
100-275
               

               
Cow position:
               
chr25:11151721-11151900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr26:20185746-20185486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr26:16508764-16508513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
41-260
               

               
Cow position:
               
chr26:33949690-33949910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr26:11303226-11303015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr26:10124502-10124701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
72-274
               

               
Cow position:
               
chr26:17330156-17329956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr27:27186978-27186720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr27:11954749-11954502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
28-273
               

               
Cow position:
               
chr27:20866014-20865759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
41-290
               

               
Cow position:
               
chr27:25676786-25677034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 37
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr27:30697176-30696958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
75-274
               

               
Cow position:
               
chr27:18954649-18954445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr27:20962058-20962214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr28:25847722-25847445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr28:9419899-9420152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr28:32764901-32764658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
31-274
               

               
Cow position:
               
chr28:30966903-30966649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
41-264
               

               
Cow position:
               
chr28:9184754-9184977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr28:22499127-22498903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 171
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr28:22412195-22412418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr28:5054785-5055007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
74-274
               

               
Cow position:
               
chr28:25166361-25166569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
83-274
               

               
Cow position:
               
chr28:23467554-23467356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr28:32635278-32635456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr29:93031-92761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr29:38476765-38476490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr29:34535760-34536021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr29:30106185-30106424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 126
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr29:133630-133391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr29:13652730-13652477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr29:37451754-37451495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr29:22285743-22285489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chr29:2410109-2410355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr29:34120843-34121092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
110, 195
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chr29:22949234-22949483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr29:13077358-13077116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr29:34390517-34390706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr3:62911251-62911528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr3:78625869-78625626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
21-274
               

               
Cow position:
               
chr3:65877615-65877350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr3:2295314-2295056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr3:62611344-62611093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr3:76926996-76926745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr3:9290188-9289939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr3:8563499-8563744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr3:58443803-58444047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr3:65961455-65961213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr3:51439311-51439534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
42-272
               

               
Cow position:
               
chr3:61611114-61611352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr3:73736415-73736645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
56-279
               

               
Cow position:
               
chr3:70249857-70250076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr3:18996766-18996550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr3:62157148-62156930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
71-259
               

               
Cow position:
               
chr3:1074121-1073936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
81-267
               

               
Cow position:
               
chr3:7948564-7948751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:39510750-39511028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 210
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr4:57206031-57205762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:24662080-24662358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
24-259
               

               
Cow position:
               
chr4:41469820-41470052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chr4:66127876-66128130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr4:17477677-17477432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr4:46152044-46152298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
27-281
               

               
Cow position:
               
chr4:9292193-9291926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr4:23888811-23889061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
41-273
               

               
Cow position:
               
chr4:22852968-22852742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr4:3369222-3369010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chr4:22464850-22465077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr4:9713073-9712861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 145
               

               
Conread position:
               
75-273
               

               
Cow position:
               
chr4:20586015-20586218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
90-275
               

               
Cow position:
               
chr4:61272263-61272453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr5:28677932-28678220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr5:43004272-43004002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr5:32164421-32164698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr5:70249651-70249370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr5:33472035-33472289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
26-274
               

               
Cow position:
               
chr5:54038673-54038418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chr5:32614559-32614809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr5:51070673-51070422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr5:60275284-60275044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
104, 5
               

               
Conread position:
               
32-332
               

               
Cow position:
               
chr5:70604065-70603757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr5:62143494-62143722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
53-273
               

               
Cow position:
               
chr5:28037545-28037331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
72-276
               

               
Cow position:
               
chr5:19419981-19420181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr6:40692135-40692406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
15-273
               

               
Cow position:
               
chr6:15991301-15991567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 246
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chr6:17757536-17757285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr6:14805949-14805696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr6:44906017-44905774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 161
               

               
Conread position:
               
30-273
               

               
Cow position:
               
chr6:49391710-49391962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
32-246
               

               
Cow position:
               
chr6:7755326-7755538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
36-282
               

               
Cow position:
               
chr6:61071715-61071966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr6:22995525-22995750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr6:15481151-15480937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr6:29085829-29085619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
75-274
               

               
Cow position:
               
chr6:33896069-33896265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr6:16274670-16274506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
21-274
               

               
Cow position:
               
chr7:59148330-59148078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
24-191
               

               
Cow position:
               
chr7:4557109-4557274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
24-239
               

               
Cow position:
               
chr7:24061143-24060926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
24-272
               

               
Cow position:
               
chr7:57184888-57185138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr7:23681903-23682156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 203
               

               
Conread position:
               
24-275
               

               
Cow position:
               
chr7:18934084-18934340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr7:42495068-42495320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr7:26129808-26130054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
30-257
               

               
Cow position:
               
chr7:26196312-26196541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr7:51353865-51354100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr7:26829059-26829328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr7:26022485-26022250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
42-275
               

               
Cow position:
               
chr7:1815879-1816100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr7:37069808-37069584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
86, 174
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr7:3950102-3949876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr8:30440563-30440830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr8:36854195-36854459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr8:30553999-30554261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 197
               

               
Conread position:
               
23-273
               

               
Cow position:
               
chr8:18457644-18457391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr8:21121612-21121825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr8:24889714-24889469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chr8:40431627-40431870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr8:31624795-31624553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 173
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr8:25677630-25677879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
32-276
               

               
Cow position:
               
chr8:16685218-16685464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr8:20123725-20123951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr8:54156566-54156332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 160
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr8:7710176-7710396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr9:10111552-10111290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr9:7619455-7619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
17-141
               

               
Cow position:
               
chr9:54966134-54966258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chr9:14052804-14052560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chr9:58191922-58191683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr9:34945466-34945708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr9:63966722-63966975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr9:9634214-9633964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
39-273
               

               
Cow position:
               
chr9:60608163-60607930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
65-274
               

               
Cow position:
               
chr9:48056670-48056465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr9:5608274-5608467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chrX:34009245-34008966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chrX:18247846-18247567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 203
               

               
Conread position:
               
21-274
               

               
Cow position:
               
chrX:20504120-20503854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
23-271
               

               
Cow position:
               
chrX:24923319-24923074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
24-267
               

               
Cow position:
               
chrX:17158357-17158590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
24-273
               

               
Cow position:
               
chrX:38569948-38569698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
24-274
               

               
Cow position:
               
chrX:7805847-7805593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
27-273
               

               
Cow position:
               
chrX:40707935-40707687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 166
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chrX:40279276-40279030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 194
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chrX:3249278-3249503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chrX:516973-516719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chrX:25144536-25144312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chrX:25282038-25282279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
41-273
               

               
Cow position:
               
chrX:21319131-21318892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
53-259
               

               
Cow position:
               
chrX:7747907-7748114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
57-274
               

               
Cow position:
               
chrX:23696958-23697187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chrX:25839781-25839558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
72-273
               

               
Cow position:
               
chrX:23314391-23314598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0