Cow genome map
| Conread name: | rcbl0_013975.y1 |
| Conread position: | 1-420 |
| Cow position: | chr1:99021186-99021583 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 339, 7 |
| Conread position: | 8-422 |
| Cow position: | chr1:29904303-29904698 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 331, 21 |
| Conread position: | 9-416 |
| Cow position: | chr1:93416398-93416013 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 145 |
| Conread position: | 255-419 |
| Cow position: | chr1:88297210-88297049 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 135 |
| Conread position: | 1-420 |
| Cow position: | chr10:39881478-39881882 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 8-354 |
| Cow position: | chr10:24978349-24978692 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 193 |
| Conread position: | 93-415 |
| Cow position: | chr10:6261567-6261868 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 247, 67 |
| Conread position: | 1-401 |
| Cow position: | chr11:30186531-30186154 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 7 |
| Conread position: | 8-423 |
| Cow position: | chr11:10218130-10218524 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 181 |
| Conread position: | 12-419 |
| Cow position: | chr11:38005899-38006290 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 327, 154 |
| Conread position: | 230-411 |
| Cow position: | chr11:13161388-13161206 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 85 |
| Conread position: | 245-418 |
| Cow position: | chr11:9416427-9416604 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 206-418 |
| Cow position: | chr12:17975088-17974876 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 22-395 |
| Cow position: | chr13:22186240-22186588 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 145 |
| Conread position: | 48-419 |
| Cow position: | chr13:21130742-21130392 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 142 |
| Conread position: | 234-420 |
| Cow position: | chr13:30261542-30261353 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 1-410 |
| Cow position: | chr14:30707300-30707692 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 179 |
| Conread position: | 14-419 |
| Cow position: | chr14:39722806-39723178 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 44 |
| Conread position: | 9-430 |
| Cow position: | chr15:32672037-32671617 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 213 |
| Conread position: | 245-417 |
| Cow position: | chr15:20358339-20358516 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 245-420 |
| Cow position: | chr15:32286437-32286267 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 162-422 |
| Cow position: | chr16:14669178-14668926 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 178, 10 |
| Conread position: | 172-420 |
| Cow position: | chr16:25293246-25292993 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 245-416 |
| Cow position: | chr16:16818804-16818979 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 253-420 |
| Cow position: | chr16:24155617-24155789 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 177-409 |
| Cow position: | chr18:9187106-9187341 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 1-395 |
| Cow position: | chr19:32183629-32184039 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 189, 349 |
| Conread position: | 1-419 |
| Cow position: | chr19:7450182-7450575 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 1-420 |
| Cow position: | chr19:20111410-20111805 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 287, 7 |
| Conread position: | 206-418 |
| Cow position: | chr19:7405778-7405998 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 176-412 |
| Cow position: | chr2:4274862-4275103 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 242-417 |
| Cow position: | chr2:45923882-45924058 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 244-418 |
| Cow position: | chr2:50402364-50402185 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-411 |
| Cow position: | chr20:18328511-18328893 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 154 |
| Conread position: | 11-420 |
| Cow position: | chr20:19367522-19367922 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 140 |
| Conread position: | 1-418 |
| Cow position: | chr21:993133-993530 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 7 |
| Conread position: | 83-419 |
| Cow position: | chr21:34002480-34002799 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 214, 83 |
| Conread position: | 252-419 |
| Cow position: | chr21:3193691-3193522 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 1-419 |
| Cow position: | chr22:293439-293826 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 24 |
| Conread position: | 1-419 |
| Cow position: | chr22:8873600-8873198 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 139 |
| Conread position: | 2-419 |
| Cow position: | chr22:36581376-36581759 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 10-420 |
| Cow position: | chr22:35943684-35944073 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 69 |
| Conread position: | 171-419 |
| Cow position: | chr22:10964761-10964514 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 169, 26 |
| Conread position: | 249-420 |
| Cow position: | chr22:36592833-36593001 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 93-395 |
| Cow position: | chr23:1322205-1322488 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 160, 79 |
| Conread position: | 245-417 |
| Cow position: | chr23:6214237-6214064 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 1-409 |
| Cow position: | chr24:14873537-14873923 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 140 |
| Conread position: | 16-406 |
| Cow position: | chr24:6048042-6047674 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 237-420 |
| Cow position: | chr27:24560712-24560534 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 245-420 |
| Cow position: | chr27:6012694-6012515 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 8-420 |
| Cow position: | chr28:10591615-10591998 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 63 |
| Conread position: | 245-419 |
| Cow position: | chr28:29437598-29437768 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 1-420 |
| Cow position: | chr29:16017398-16017800 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 145 |
| Conread position: | 221-416 |
| Cow position: | chr3:37624189-37623994 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 207-419 |
| Cow position: | chr4:4175718-4175506 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 237-419 |
| Cow position: | chr4:1497504-1497689 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 103, 143 |
| Conread position: | 8-420 |
| Cow position: | chr5:24109497-24109910 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 28 |
| Conread position: | 1-423 |
| Cow position: | chr6:59478530-59478935 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 323, 24 |
| Conread position: | 46-430 |
| Cow position: | chr6:10629229-10628851 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 320, 125 |
| Conread position: | 245-411 |
| Cow position: | chr6:34024316-34024149 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 1-420 |
| Cow position: | chr7:30299920-30299519 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 144 |
| Conread position: | 1-420 |
| Cow position: | chr7:41876703-41877098 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 13 |
| Conread position: | 113-420 |
| Cow position: | chr7:52385589-52385895 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 223, 72 |
| Conread position: | 230-419 |
| Cow position: | chr7:30119965-30120151 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 239-416 |
| Cow position: | chr7:41486910-41486734 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 245-419 |
| Cow position: | chr7:26850041-26849863 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 245-419 |
| Cow position: | chr7:53058220-53058396 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 1-419 |
| Cow position: | chr8:38579331-38579728 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 142 |
| Conread position: | 1-420 |
| Cow position: | chr8:39160281-39159878 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 86 |
| Conread position: | 1-419 |
| Cow position: | chr9:59510218-59509827 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 251-419 |
| Cow position: | chr9:16196505-16196676 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 108-395 |
| Cow position: | chrX:41889954-41890216 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 232, 35 |
| Conread position: | 245-406 |
| Cow position: | chrX:6251329-6251494 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 19 |