Cow genome map

Conread name: rcbl0_019776.y1

Conread position: 2-587
Cow position: chr1:77657399-77656805 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 154

Conread position: 2-589
Cow position: chr1:46694053-46694649 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 2-589
Cow position: chr1:58419528-58418934 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 3-363
Cow position: chr1:4026790-4026422 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 78

Conread position: 3-367
Cow position: chr1:73756693-73756348 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 206, 113

Conread position: 3-397
Cow position: chr1:53369049-53368634 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 396

Conread position: 3-424
Cow position: chr1:40603888-40603458 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-449
Cow position: chr1:44230087-44229619 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 35

Conread position: 3-456
Cow position: chr1:27495100-27494638 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 3-487
Cow position: chr1:33442338-33442833 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 3-491
Cow position: chr1:42053721-42054218 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-561
Cow position: chr1:38418680-38418108 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 3-580
Cow position: chr1:13250685-13251277 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:71691416-71690824 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:99628221-99628790 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 3-581
Cow position: chr1:22012102-22012694 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-581
Cow position: chr1:22253921-22253341 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 3-582
Cow position: chr1:3340527-3339932 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 147

Conread position: 3-583
Cow position: chr1:67290472-67289885 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 3-586
Cow position: chr1:68282396-68281810 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 42

Conread position: 3-587
Cow position: chr1:21577415-21576802 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-588
Cow position: chr1:24780625-24781221 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-588
Cow position: chr1:72087447-72086858 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 3-589
Cow position: chr1:5012938-5013540 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 113

Conread position: 3-589
Cow position: chr1:8828883-8828279 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 3-589
Cow position: chr1:14528606-14529200 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 152

Conread position: 3-589
Cow position: chr1:14561355-14561955 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 116

Conread position: 3-589
Cow position: chr1:18196458-18195853 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:20544089-20543485 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 3-589
Cow position: chr1:24581243-24580664 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 3-589
Cow position: chr1:30034153-30033541 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:33716823-33716218 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 3-589
Cow position: chr1:36645589-36646193 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:38712576-38711970 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:39234644-39235245 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:50764995-50764416 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:51980829-51980243 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 3-589
Cow position: chr1:52054687-52054078 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-589
Cow position: chr1:52354812-52355414 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr1:52434885-52434283 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 3-589
Cow position: chr1:57119973-57120573 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 3-589
Cow position: chr1:61221281-61220690 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr1:65390424-65389817 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 354

Conread position: 3-589
Cow position: chr1:66491439-66490839 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 3-589
Cow position: chr1:68601767-68602372 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:68845853-68846452 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 322

Conread position: 3-589
Cow position: chr1:72987318-72986716 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr1:79255855-79255253 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 3-589
Cow position: chr1:79590702-79590109 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 3-589
Cow position: chr1:82370269-82369678 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 3-589
Cow position: chr1:85774066-85773466 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 3-589
Cow position: chr1:99571732-99572308 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 143

Conread position: 4-581
Cow position: chr1:92196835-92196244 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 6-589
Cow position: chr1:53650506-53649910 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 6-589
Cow position: chr1:67013856-67013285 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 150

Conread position: 9-366
Cow position: chr1:46885689-46885317 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 9-433
Cow position: chr1:97206211-97205774 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 137

Conread position: 9-472
Cow position: chr1:47923011-47923484 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-487
Cow position: chr1:76699886-76700383 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 9-527
Cow position: chr1:3440819-3440284 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 344

Conread position: 9-565
Cow position: chr1:19056725-19056156 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-566
Cow position: chr1:55327381-55327955 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 9-580
Cow position: chr1:89492384-89492962 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:101981664-101982228 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 374
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 94

Conread position: 9-583
Cow position: chr1:53308801-53309393 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 9-583
Cow position: chr1:70865100-70864523 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-583
Cow position: chr1:85142359-85142960 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 9-583
Cow position: chr1:95474053-95474637 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr1:28714892-28714299 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-588
Cow position: chr1:29038398-29037799 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 9-589
Cow position: chr1:2764986-2764374 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 143

Conread position: 9-589
Cow position: chr1:2990340-2989741 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:17937896-17938494 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:20377751-20378338 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 27

Conread position: 9-589
Cow position: chr1:20528017-20527418 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 105

Conread position: 9-589
Cow position: chr1:25553659-25553063 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:26588805-26588208 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 325

Conread position: 9-589
Cow position: chr1:31535708-31535110 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr1:33855123-33854525 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr1:33900396-33899803 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:46612440-46613039 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:49268737-49268142 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:51884458-51883873 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:56666957-56666358 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:62507388-62507991 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:67006730-67006136 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-589
Cow position: chr1:69770672-69770077 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-589
Cow position: chr1:75403752-75403152 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr1:77554146-77554740 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:77925338-77924739 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:81309218-81308619 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:83170298-83169700 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 9-589
Cow position: chr1:85776605-85777201 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr1:93858369-93857780 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:95457208-95456610 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr1:99117861-99117273 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 80

Conread position: 9-589
Cow position: chr1:102784378-102783797 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 9-589
Cow position: chr1:102815329-102814731 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 11-586
Cow position: chr1:22790251-22789662 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 11-589
Cow position: chr1:86020501-86021082 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 57

Conread position: 12-353
Cow position: chr1:89742418-89742763 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 181

Conread position: 12-398
Cow position: chr1:23041145-23040760 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 101

Conread position: 12-400
Cow position: chr1:38688068-38687678 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 135

Conread position: 12-526
Cow position: chr1:56232487-56231964 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 343
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 198, 88

Conread position: 12-589
Cow position: chr1:76873733-76873140 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 12-589
Cow position: chr1:79334132-79334729 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 12-589
Cow position: chr1:82908973-82909573 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 12-589
Cow position: chr1:91105892-91105300 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-414
Cow position: chr1:16337253-16337657 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 134

Conread position: 13-529
Cow position: chr1:22227451-22226941 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 13-566
Cow position: chr1:9262349-9261778 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-580
Cow position: chr1:83136787-83136210 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr1:19145340-19145911 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 13-589
Cow position: chr1:77748595-77748001 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-571
Cow position: chr1:89484949-89484376 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 34

Conread position: 14-589
Cow position: chr1:94663504-94662911 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 59

Conread position: 16-589
Cow position: chr1:73761702-73762287 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 18-581
Cow position: chr1:54477649-54477060 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 18-584
Cow position: chr1:23577980-23578540 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 20-589
Cow position: chr1:10034371-10033796 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 27-571
Cow position: chr1:42554830-42554282 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 8

Conread position: 27-580
Cow position: chr1:6196441-6197010 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 27-581
Cow position: chr1:28677882-28677325 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 41

Conread position: 27-587
Cow position: chr1:10726462-10725884 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 123

Conread position: 27-587
Cow position: chr1:19483415-19483983 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 91

Conread position: 27-589
Cow position: chr1:3263825-3263247 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 120

Conread position: 27-589
Cow position: chr1:88327645-88328222 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 28-582
Cow position: chr1:68812109-68812652 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 22

Conread position: 29-557
Cow position: chr1:4452250-4452796 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 127

Conread position: 30-472
Cow position: chr1:12465196-12465638 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 30-589
Cow position: chr1:73463801-73463224 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 31-423
Cow position: chr1:22616076-22616476 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 116

Conread position: 33-442
Cow position: chr1:77106036-77106449 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 271
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 80

Conread position: 33-537
Cow position: chr1:23058116-23057586 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 35

Conread position: 33-589
Cow position: chr1:58196622-58197180 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 35-589
Cow position: chr1:61563878-61563295 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 190

Conread position: 38-566
Cow position: chr1:85338678-85338153 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 360
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 263

Conread position: 38-589
Cow position: chr1:54933753-54933186 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 20

Conread position: 43-522
Cow position: chr1:86705947-86705464 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 63

Conread position: 45-589
Cow position: chr1:2744918-2744369 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 104

Conread position: 46-566
Cow position: chr1:98988607-98989145 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 101

Conread position: 50-503
Cow position: chr1:57636427-57635957 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 50-589
Cow position: chr1:57759724-57759173 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 99

Conread position: 51-487
Cow position: chr1:29901441-29901866 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 95

Conread position: 54-589
Cow position: chr1:7739536-7738972 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 92

Conread position: 55-580
Cow position: chr1:82880234-82879702 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 100

Conread position: 56-465
Cow position: chr1:44836714-44837135 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 39

Conread position: 58-557
Cow position: chr1:61283226-61282713 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 88

Conread position: 60-589
Cow position: chr1:55780673-55780129 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 86

Conread position: 61-589
Cow position: chr1:86544339-86544879 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 85

Conread position: 69-586
Cow position: chr1:82568204-82567678 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 69-589
Cow position: chr1:26446936-26446412 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 83-589
Cow position: chr1:11873864-11874382 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 314

Conread position: 89-428
Cow position: chr1:60410739-60410388 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 89-472
Cow position: chr1:33189870-33189491 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 24

Conread position: 94-377
Cow position: chr1:85152271-85151978 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 62

Conread position: 98-583
Cow position: chr1:71792701-71792194 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 250

Conread position: 102-580
Cow position: chr1:61746418-61746900 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 44

Conread position: 103-589
Cow position: chr1:38544955-38545460 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 118-569
Cow position: chr1:44078676-44079139 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 149-503
Cow position: chr1:81320608-81320982 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 203

Conread position: 151-580
Cow position: chr1:31351922-31352358 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 207-517
Cow position: chr1:41515421-41515744 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 38

Conread position: 207-589
Cow position: chr1:46821260-46820873 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 100

Conread position: 207-589
Cow position: chr1:70534802-70535205 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 304

Conread position: 207-589
Cow position: chr1:99917086-99916697 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 134

Conread position: 209-589
Cow position: chr1:7200748-7200364 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 104

Conread position: 211-405
Cow position: chr1:60033278-60033466 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 91

Conread position: 211-441
Cow position: chr1:86574468-86574239 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 130

Conread position: 211-512
Cow position: chr1:57946574-57946266 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 211-513
Cow position: chr1:79296446-79296142 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 52

Conread position: 211-522
Cow position: chr1:6765460-6765771 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 130

Conread position: 211-524
Cow position: chr1:38401244-38400946 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 31, 70

Conread position: 211-524
Cow position: chr1:60280171-60279860 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 226

Conread position: 211-550
Cow position: chr1:34363280-34362946 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 97, 91

Conread position: 211-569
Cow position: chr1:21453267-21453610 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 153, 82

Conread position: 211-580
Cow position: chr1:4375161-4375516 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 211-580
Cow position: chr1:7837115-7837493 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 173

Conread position: 211-581
Cow position: chr1:71045146-71044774 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 226

Conread position: 211-581
Cow position: chr1:101787313-101787670 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 33

Conread position: 211-587
Cow position: chr1:100536799-100536409 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 211-589
Cow position: chr1:5162703-5163083 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 112

Conread position: 211-589
Cow position: chr1:13718198-13718579 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 211-589
Cow position: chr1:24655470-24655088 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 211-589
Cow position: chr1:26838589-26838213 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 211-589
Cow position: chr1:40509604-40510002 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 211-589
Cow position: chr1:45006583-45006232 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 247, 10

Conread position: 211-589
Cow position: chr1:52371614-52371230 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 211-589
Cow position: chr1:56170601-56170218 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 211-589
Cow position: chr1:61097142-61096758 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr1:69670980-69671363 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 211-589
Cow position: chr1:73968154-73967770 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 211-589
Cow position: chr1:89112457-89112081 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 90

Conread position: 212-436
Cow position: chr1:60554694-60554919 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 103, 112

Conread position: 212-452
Cow position: chr1:58780038-58779808 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 118

Conread position: 215-587
Cow position: chr1:53397313-53396965 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 109

Conread position: 216-456
Cow position: chr1:15049436-15049206 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 153, 20

Conread position: 216-581
Cow position: chr1:72139828-72139459 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 217-399
Cow position: chr1:100435943-100435765 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 111

Conread position: 217-518
Cow position: chr1:9438665-9438961 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 54

Conread position: 217-588
Cow position: chr1:56746520-56746143 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 125

Conread position: 217-588
Cow position: chr1:61204020-61203643 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 217-589
Cow position: chr1:42740332-42739954 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 217-589
Cow position: chr1:81302770-81302374 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 218-587
Cow position: chr1:77166463-77166099 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 104

Conread position: 218-589
Cow position: chr1:62928104-62927727 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 219-570
Cow position: chr1:90622599-90622946 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 224-589
Cow position: chr1:42875031-42875398 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 225

Conread position: 224-589
Cow position: chr1:53371997-53371616 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 92

Conread position: 227-513
Cow position: chr1:60308507-60308228 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 214, 28

Conread position: 227-537
Cow position: chr1:15368001-15368326 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 232-441
Cow position: chr1:21132238-21132444 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 70

Conread position: 232-473
Cow position: chr1:56935467-56935713 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 109

Conread position: 232-537
Cow position: chr1:7790190-7790492 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 92

Conread position: 232-537
Cow position: chr1:59013775-59014085 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 88

Conread position: 232-587
Cow position: chr1:63240312-63239954 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 113

Conread position: 232-589
Cow position: chr1:61747832-61748192 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 104

Conread position: 235-533
Cow position: chr1:69286794-69287092 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 10

Conread position: 237-589
Cow position: chr1:52379909-52379551 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 64

Conread position: 240-589
Cow position: chr1:93850914-93850559 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 243-577
Cow position: chr1:44127243-44127570 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 81

Conread position: 244-589
Cow position: chr1:24921909-24922266 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 125, 27

Conread position: 250-580
Cow position: chr1:68818308-68818641 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 87

Conread position: 257-582
Cow position: chr1:57970026-57970327 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 23

Conread position: 260-556
Cow position: chr1:56475587-56475292 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 6

Conread position: 260-584
Cow position: chr1:21678383-21678064 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 42

Conread position: 265-587
Cow position: chr1:55145649-55145305 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 266-589
Cow position: chr1:3382732-3383059 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Conread position: 270-551
Cow position: chr1:41517281-41517561 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 92

Conread position: 275-568
Cow position: chr1:70387751-70388047 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 293-589
Cow position: chr1:43448951-43449254 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 36

Conread position: 298-580
Cow position: chr1:31341855-31342131 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 24

Conread position: 303-580
Cow position: chr1:38279189-38279472 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 27

Conread position: 306-577
Cow position: chr1:37541764-37542036 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 307-589
Cow position: chr1:86592758-86593046 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 15

Conread position: 308-580
Cow position: chr1:99581912-99582189 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 21

Conread position: 317-513
Cow position: chr1:90391344-90391543 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 113, 5

Conread position: 322-581
Cow position: chr1:72864480-72864217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 183

Conread position: 330-581
Cow position: chr1:73870378-73870119 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 225

Conread position: 330-589
Cow position: chr1:7324596-7324329 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 12, 207

Conread position: 330-589
Cow position: chr1:11288862-11289131 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 87

Conread position: 333-589
Cow position: chr1:29656710-29656444 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 337-580
Cow position: chr1:56726674-56726432 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 130

Conread position: 337-589
Cow position: chr1:11771264-11771532 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 340-582
Cow position: chr1:61662024-61662271 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 129

Conread position: 340-589
Cow position: chr1:18087943-18087687 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr1:70037732-70037983 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 123

Conread position: 340-589
Cow position: chr1:73010498-73010242 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr1:73440480-73440224 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr1:85630850-85630594 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr1:99118998-99118742 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 196

Conread position: 350-580
Cow position: chr1:21165273-21165037 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 186

Conread position: 350-588
Cow position: chr1:21090969-21090724 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 186

Conread position: 356-527
Cow position: chr1:31964578-31964754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 88

Conread position: 358-584
Cow position: chr1:22909361-22909133 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 21

Conread position: 359-584
Cow position: chr1:81837870-81838102 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 195

Conread position: 360-579
Cow position: chr1:73404275-73404049 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 369-589
Cow position: chr1:49132689-49132915 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 381-579
Cow position: chr1:40964675-40964877 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 13

Conread position: 384-589
Cow position: chr1:31190958-31191166 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 10, 28

Conread position: 392-578
Cow position: chr1:16372734-16372543 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 143

Conread position: 394-581
Cow position: chr1:12871996-12872188 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 395-589
Cow position: chr1:64594852-64595052 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 405-587
Cow position: chr1:30440602-30440420 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 96

Conread position: 409-589
Cow position: chr1:31707926-31707740 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 126

Conread position: 413-589
Cow position: chr1:10468882-10469064 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 72

Conread position: 422-589
Cow position: chr1:81860084-81860252 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 429-589
Cow position: chr1:81357238-81357398 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 18

Conread position: 444-589
Cow position: chr1:28413821-28413966 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 66

Conread position: 447-589
Cow position: chr1:34684883-34684744 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 42

Conread position: 452-580
Cow position: chr1:98534992-98534864 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 452-589
Cow position: chr1:29365802-29365664 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 97, 78

Conread position: 3-375
Cow position: chr10:45669660-45670043 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 3-409
Cow position: chr10:54799326-54798906 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-426
Cow position: chr10:4711205-4710778 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-436
Cow position: chr10:35308735-35308290 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 3-466
Cow position: chr10:2738071-2737595 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 313
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 61

Conread position: 3-473
Cow position: chr10:33665414-33664915 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 3-487
Cow position: chr10:6012453-6012953 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-491
Cow position: chr10:21422698-21423200 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-560
Cow position: chr10:66875511-66876062 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 163

Conread position: 3-568
Cow position: chr10:8460097-8459528 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 3-568
Cow position: chr10:43288499-43289073 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 150

Conread position: 3-572
Cow position: chr10:15867815-15867237 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 114

Conread position: 3-574
Cow position: chr10:3998485-3997922 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 3-580
Cow position: chr10:9798643-9799224 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 53

Conread position: 3-580
Cow position: chr10:15754239-15753652 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 121

Conread position: 3-580
Cow position: chr10:20372545-20373138 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 144

Conread position: 3-581
Cow position: chr10:48741595-48742179 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 3-582
Cow position: chr10:17868384-17868960 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 392
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 98

Conread position: 3-582
Cow position: chr10:42636550-42635981 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr10:3984997-3984397 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 3-588
Cow position: chr10:56834850-56834260 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 3-589
Cow position: chr10:130800-130203 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr10:1381373-1380779 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:1719969-1720584 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-589
Cow position: chr10:14331952-14332558 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 146

Conread position: 3-589
Cow position: chr10:20398777-20398197 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 3-589
Cow position: chr10:21449316-21449916 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 3-589
Cow position: chr10:22105366-22104763 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 3-589
Cow position: chr10:22321100-22320506 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 3-589
Cow position: chr10:23912957-23913571 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 351

Conread position: 3-589
Cow position: chr10:23935612-23935034 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 3-589
Cow position: chr10:25006141-25005549 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 71

Conread position: 3-589
Cow position: chr10:25259597-25259004 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 3-589
Cow position: chr10:29816160-29815568 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 314

Conread position: 3-589
Cow position: chr10:32704650-32704045 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:38013932-38013329 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 3-589
Cow position: chr10:38155031-38154432 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 3-589
Cow position: chr10:38942006-38941401 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 3-589
Cow position: chr10:40376875-40376290 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 3-589
Cow position: chr10:45648743-45648140 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:45769616-45769044 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 3-589
Cow position: chr10:46195370-46194756 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 3-589
Cow position: chr10:49146106-49145524 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 12

Conread position: 3-589
Cow position: chr10:51559288-51558683 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr10:53828470-53827864 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 4-507
Cow position: chr10:42459944-42460480 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 167

Conread position: 5-537
Cow position: chr10:44864715-44865255 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 9-409
Cow position: chr10:17836317-17836725 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 145

Conread position: 9-418
Cow position: chr10:30466360-30466773 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 272
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 83, 29

Conread position: 9-561
Cow position: chr10:43489513-43488939 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 140

Conread position: 9-577
Cow position: chr10:31182299-31182872 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr10:28236372-28235797 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 191

Conread position: 9-580
Cow position: chr10:31734555-31733975 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 9-580
Cow position: chr10:44765554-44764981 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 17

Conread position: 9-580
Cow position: chr10:64347836-64347263 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-581
Cow position: chr10:1979107-1979689 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 261

Conread position: 9-581
Cow position: chr10:22528335-22528928 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-581
Cow position: chr10:27094403-27095014 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 9-583
Cow position: chr10:50452433-50451846 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 9-584
Cow position: chr10:14905091-14904503 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 34

Conread position: 9-587
Cow position: chr10:47910497-47909900 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-588
Cow position: chr10:11111129-11110553 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-588
Cow position: chr10:20446670-20446096 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 131

Conread position: 9-589
Cow position: chr10:277477-278074 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:326972-326373 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:7894566-7895166 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:10148195-10147611 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 9-589
Cow position: chr10:12654085-12653486 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:15490709-15490110 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:15888855-15888265 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 9-589
Cow position: chr10:19843553-19842954 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:20871392-20870809 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:21656990-21656406 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 29

Conread position: 9-589
Cow position: chr10:23412927-23412329 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:24296595-24297220 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 9-589
Cow position: chr10:29777541-29776937 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr10:32365822-32365222 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr10:37908266-37908867 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr10:41161279-41160687 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 112

Conread position: 9-589
Cow position: chr10:41570983-41570383 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr10:55096938-55096346 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:58937778-58938360 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 9-589
Cow position: chr10:60960499-60959894 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 141

Conread position: 9-589
Cow position: chr10:64304159-64304743 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 9-589
Cow position: chr10:65810287-65810886 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr10:66495520-66496119 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 326

Conread position: 10-563
Cow position: chr10:57142995-57143556 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 10-589
Cow position: chr10:1185293-1185879 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 112

Conread position: 11-523
Cow position: chr10:26145805-26146314 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 11-581
Cow position: chr10:36231549-36230993 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 135

Conread position: 11-589
Cow position: chr10:24624938-24625530 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 141

Conread position: 12-514
Cow position: chr10:40707393-40706885 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 339
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 38, 102

Conread position: 12-584
Cow position: chr10:20516812-20516201 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 97

Conread position: 12-589
Cow position: chr10:76959-76381 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 12-589
Cow position: chr10:2612948-2612370 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 12-589
Cow position: chr10:26291608-26292206 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 14-517
Cow position: chr10:47590903-47591417 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 88

Conread position: 14-580
Cow position: chr10:21490802-21490230 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 14-581
Cow position: chr10:45484130-45484717 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 17-507
Cow position: chr10:26732090-26732603 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 18-580
Cow position: chr10:2516905-2516327 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 139

Conread position: 18-589
Cow position: chr10:14982102-14982678 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 19-454
Cow position: chr10:39939775-39940221 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 19-551
Cow position: chr10:63627001-63626464 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 128

Conread position: 22-589
Cow position: chr10:18885402-18885965 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 26-589
Cow position: chr10:29628404-29628985 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 27-410
Cow position: chr10:38519375-38519771 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 27-580
Cow position: chr10:16646443-16647017 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 72

Conread position: 27-589
Cow position: chr10:14948619-14948041 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 28-589
Cow position: chr10:19894859-19894293 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 29-449
Cow position: chr10:52288031-52288459 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 32-587
Cow position: chr10:14807795-14807222 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 115

Conread position: 33-589
Cow position: chr10:10721407-10721968 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 125

Conread position: 50-589
Cow position: chr10:37773719-37773162 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 96

Conread position: 55-580
Cow position: chr10:46226652-46226117 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 284

Conread position: 58-589
Cow position: chr10:30720527-30719978 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 58-589
Cow position: chr10:33555831-33556374 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 89

Conread position: 67-589
Cow position: chr10:59839959-59840492 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 68-472
Cow position: chr10:55027738-55027332 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 14

Conread position: 68-580
Cow position: chr10:42754858-42754352 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 86

Conread position: 68-589
Cow position: chr10:3506334-3506859 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 19

Conread position: 69-580
Cow position: chr10:8293948-8293423 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 39

Conread position: 69-589
Cow position: chr10:55975362-55974820 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 73-589
Cow position: chr10:40592031-40591498 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 84-589
Cow position: chr10:39080212-39079693 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 89-566
Cow position: chr10:6851014-6850528 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 67

Conread position: 90-440
Cow position: chr10:873987-873624 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 65

Conread position: 90-589
Cow position: chr10:28569247-28568718 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 53

Conread position: 98-589
Cow position: chr10:57553349-57553858 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 48

Conread position: 124-441
Cow position: chr10:29426715-29426390 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 31

Conread position: 135-587
Cow position: chr10:21081586-21081121 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 148

Conread position: 137-401
Cow position: chr10:55046706-55046433 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 136

Conread position: 146-586
Cow position: chr10:34666172-34666625 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 187

Conread position: 157-589
Cow position: chr10:51863635-51864056 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 175

Conread position: 167-580
Cow position: chr10:25181-24759 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 195-438
Cow position: chr10:30269426-30269664 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 168, 101

Conread position: 207-589
Cow position: chr10:42644208-42643832 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 209-532
Cow position: chr10:44259273-44259594 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 6

Conread position: 210-386
Cow position: chr10:11216304-11216477 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 114

Conread position: 211-418
Cow position: chr10:10753771-10753973 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 111

Conread position: 211-448
Cow position: chr10:9569197-9569434 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-511
Cow position: chr10:9527036-9527339 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 10

Conread position: 211-581
Cow position: chr10:9445608-9445991 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 6

Conread position: 211-586
Cow position: chr10:37530158-37530523 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 91

Conread position: 211-589
Cow position: chr10:2736682-2736297 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 211-589
Cow position: chr10:8682291-8681907 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 131

Conread position: 211-589
Cow position: chr10:11623062-11623445 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 118

Conread position: 211-589
Cow position: chr10:31816429-31816814 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 211-589
Cow position: chr10:41771836-41772211 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 69

Conread position: 211-589
Cow position: chr10:53058621-53059027 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 184

Conread position: 211-589
Cow position: chr10:63776495-63776111 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 212-579
Cow position: chr10:5784575-5784949 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 81

Conread position: 213-502
Cow position: chr10:54928275-54928561 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 48, 38

Conread position: 216-580
Cow position: chr10:19140960-19141316 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 35

Conread position: 216-589
Cow position: chr10:60206787-60206416 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 217-528
Cow position: chr10:41406327-41406006 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 217-589
Cow position: chr10:22978500-22978876 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 106

Conread position: 217-589
Cow position: chr10:28030279-28030651 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 217-589
Cow position: chr10:30681838-30682210 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 124

Conread position: 217-589
Cow position: chr10:50016731-50017089 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 93

Conread position: 218-589
Cow position: chr10:27120254-27120628 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 113

Conread position: 218-589
Cow position: chr10:32087321-32086965 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 89, 22

Conread position: 222-580
Cow position: chr10:60354795-60354431 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 99

Conread position: 224-584
Cow position: chr10:24935901-24936263 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 230
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 232, 97

Conread position: 227-580
Cow position: chr10:55098305-55098651 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 227-589
Cow position: chr10:50199614-50199265 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 231-589
Cow position: chr10:21709594-21709953 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 13

Conread position: 232-589
Cow position: chr10:37788358-37788722 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 108

Conread position: 233-589
Cow position: chr10:39638345-39637984 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 96

Conread position: 240-437
Cow position: chr10:69531254-69531062 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 87

Conread position: 255-582
Cow position: chr10:41623191-41622867 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 38

Conread position: 259-589
Cow position: chr10:48909554-48909218 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 110, 81

Conread position: 261-589
Cow position: chr10:68095453-68095786 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 262-581
Cow position: chr10:9452044-9452363 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 266-581
Cow position: chr10:24751521-24751205 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 64

Conread position: 266-589
Cow position: chr10:55931094-55930765 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 57

Conread position: 272-473
Cow position: chr10:63046196-63045990 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 68

Conread position: 272-589
Cow position: chr10:55037014-55036699 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 30

Conread position: 273-589
Cow position: chr10:11406874-11406562 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 282-589
Cow position: chr10:17222968-17222655 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 47

Conread position: 285-589
Cow position: chr10:26766139-26765830 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 44

Conread position: 303-589
Cow position: chr10:60723411-60723696 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 306-565
Cow position: chr10:10101374-10101112 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 85

Conread position: 313-488
Cow position: chr10:23097876-23098056 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 65

Conread position: 329-588
Cow position: chr10:31005766-31006030 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 240

Conread position: 330-581
Cow position: chr10:25866145-25866402 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 330-583
Cow position: chr10:38542172-38542430 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 330-587
Cow position: chr10:9580526-9580789 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 49

Conread position: 336-589
Cow position: chr10:1662430-1662690 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 200

Conread position: 340-509
Cow position: chr10:52828827-52829001 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 340-589
Cow position: chr10:30689538-30689281 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 113, 195

Conread position: 342-581
Cow position: chr10:8220040-8219801 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 347-588
Cow position: chr10:31465824-31465566 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 217

Conread position: 349-589
Cow position: chr10:59173540-59173786 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 350-589
Cow position: chr10:10047014-10047257 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 118

Conread position: 351-589
Cow position: chr10:60029249-60029005 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 152

Conread position: 357-589
Cow position: chr10:41917422-41917657 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 47

Conread position: 359-589
Cow position: chr10:49914239-49914476 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 364-589
Cow position: chr10:5858336-5858105 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 171

Conread position: 367-589
Cow position: chr10:20380477-20380705 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 392-568
Cow position: chr10:11216708-11216890 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 144

Conread position: 400-589
Cow position: chr10:24757598-24757405 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 155

Conread position: 401-589
Cow position: chr10:16929640-16929446 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 134

Conread position: 401-589
Cow position: chr10:22984253-22984441 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 100

Conread position: 438-589
Cow position: chr10:19491340-19491494 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 111

Conread position: 444-584
Cow position: chr10:69530882-69530745 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 447-589
Cow position: chr10:38818333-38818190 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 449-589
Cow position: chr10:46241460-46241318 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 454-589
Cow position: chr10:42213878-42213744 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 128, 108

Conread position: 2-397
Cow position: chr11:30110534-30110137 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 2-584
Cow position: chr11:8829276-8829845 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-417
Cow position: chr11:67951370-67951796 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 3-441
Cow position: chr11:24601531-24601075 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 154

Conread position: 3-558
Cow position: chr11:44915162-44915728 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 3-560
Cow position: chr11:26467826-26467260 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-566
Cow position: chr11:19507845-19507275 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 3-570
Cow position: chr11:52297646-52298222 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 26

Conread position: 3-571
Cow position: chr11:28382184-28381610 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 12

Conread position: 3-580
Cow position: chr11:30701008-30700425 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 144

Conread position: 3-580
Cow position: chr11:71333022-71332432 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 49

Conread position: 3-581
Cow position: chr11:30165076-30164502 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-581
Cow position: chr11:84774688-84774095 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-584
Cow position: chr11:26121415-26121994 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-586
Cow position: chr11:12762672-12763264 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-587
Cow position: chr11:3796730-3796158 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 3-588
Cow position: chr11:23883856-23883269 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 70

Conread position: 3-588
Cow position: chr11:31866176-31865555 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 145

Conread position: 3-589
Cow position: chr11:259603-260229 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 3-589
Cow position: chr11:10851640-10851035 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr11:11991523-11990918 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 3-589
Cow position: chr11:26550995-26550397 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 3-589
Cow position: chr11:38235258-38235848 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 80

Conread position: 3-589
Cow position: chr11:41599162-41599767 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 158

Conread position: 3-589
Cow position: chr11:42358701-42358123 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 40

Conread position: 3-589
Cow position: chr11:50950497-50949869 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 3-589
Cow position: chr11:58399847-58399253 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 146

Conread position: 3-589
Cow position: chr11:63508010-63507432 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 64

Conread position: 3-589
Cow position: chr11:73512845-73513451 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 4-388
Cow position: chr11:16757572-16757970 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 143

Conread position: 4-589
Cow position: chr11:26483095-26482493 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 101

Conread position: 9-412
Cow position: chr11:27906841-27906438 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 9-456
Cow position: chr11:79995237-79995690 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 9-477
Cow position: chr11:42373313-42372842 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 9-569
Cow position: chr11:9432893-9432324 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 9-576
Cow position: chr11:38843134-38842561 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 86

Conread position: 9-580
Cow position: chr11:9388854-9388268 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 243

Conread position: 9-580
Cow position: chr11:48167576-48168142 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 9-580
Cow position: chr11:62009281-62009870 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr11:62792411-62791826 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-580
Cow position: chr11:84531769-84532333 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 71

Conread position: 9-581
Cow position: chr11:17037013-17037584 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 148

Conread position: 9-587
Cow position: chr11:26592258-26592854 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr11:73138091-73137515 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 9-588
Cow position: chr11:1504475-1505074 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr11:3238821-3238222 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-589
Cow position: chr11:8367080-8366481 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr11:17549678-17549079 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:20730706-20731301 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 9-589
Cow position: chr11:25760264-25759674 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:27724387-27724980 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 167

Conread position: 9-589
Cow position: chr11:28226258-28226857 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:30777483-30776884 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:30929902-30929303 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:35541557-35542147 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr11:39152109-39151518 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 9-589
Cow position: chr11:41093355-41093941 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 9-589
Cow position: chr11:49935229-49935827 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 141

Conread position: 9-589
Cow position: chr11:51034796-51034197 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:52846995-52846396 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:56463882-56463283 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr11:58137231-58136638 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:63860125-63860722 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 332

Conread position: 9-589
Cow position: chr11:66389495-66390086 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:72369571-72368974 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr11:84967628-84967029 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-578
Cow position: chr11:40458690-40458109 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 11-589
Cow position: chr11:2835777-2835185 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 11-589
Cow position: chr11:69402707-69403300 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 49

Conread position: 12-589
Cow position: chr11:416983-417552 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 63

Conread position: 12-589
Cow position: chr11:13087149-13087746 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 12-589
Cow position: chr11:27660753-27660152 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 134

Conread position: 12-589
Cow position: chr11:30255952-30255354 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 90

Conread position: 12-589
Cow position: chr11:41314812-41314217 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr11:44255586-44254994 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 12-589
Cow position: chr11:67848454-67849051 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 198

Conread position: 13-584
Cow position: chr11:26067613-26068191 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 14-589
Cow position: chr11:75256705-75256111 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 16-578
Cow position: chr11:63260699-63261274 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 131

Conread position: 16-588
Cow position: chr11:17279088-17279670 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 27

Conread position: 18-589
Cow position: chr11:25336644-25336060 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 21-589
Cow position: chr11:17854602-17854015 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 26-581
Cow position: chr11:3264326-3263754 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 135

Conread position: 27-475
Cow position: chr11:37160055-37159592 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 27-589
Cow position: chr11:16229163-16229726 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 29-555
Cow position: chr11:48659229-48658687 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 117

Conread position: 29-580
Cow position: chr11:31836683-31836115 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 118

Conread position: 29-589
Cow position: chr11:26560826-26561399 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 390
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 59

Conread position: 29-589
Cow position: chr11:35262298-35262875 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 383
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 9

Conread position: 38-517
Cow position: chr11:28394556-28394065 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 119

Conread position: 38-589
Cow position: chr11:59872296-59871736 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 109

Conread position: 39-417
Cow position: chr11:7321608-7321214 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 285

Conread position: 39-442
Cow position: chr11:7325665-7325255 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 149, 116

Conread position: 44-441
Cow position: chr11:15353341-15352936 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 265
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 165, 118

Conread position: 45-588
Cow position: chr11:5583962-5584514 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 72

Conread position: 45-589
Cow position: chr11:21852761-21853330 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 101

Conread position: 50-561
Cow position: chr11:64844532-64844022 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 14

Conread position: 50-588
Cow position: chr11:23495230-23494674 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 96

Conread position: 50-589
Cow position: chr11:12316584-12317149 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 50-589
Cow position: chr11:18920121-18920665 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 99

Conread position: 59-537
Cow position: chr11:27073853-27074336 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 318
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 50, 105

Conread position: 60-580
Cow position: chr11:41105927-41106461 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 70-587
Cow position: chr11:7681412-7680886 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 53

Conread position: 76-522
Cow position: chr11:71078874-71078419 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 83

Conread position: 76-589
Cow position: chr11:15995949-15995415 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 91-589
Cow position: chr11:46413081-46412555 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 64

Conread position: 103-579
Cow position: chr11:42793512-42794009 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 52

Conread position: 103-589
Cow position: chr11:8246609-8246113 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 104-449
Cow position: chr11:41178375-41178018 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 43

Conread position: 117-589
Cow position: chr11:45155335-45155826 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 119-589
Cow position: chr11:4266746-4267234 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 123-559
Cow position: chr11:44233814-44233377 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 32

Conread position: 123-584
Cow position: chr11:2950712-2951162 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 297
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 116

Conread position: 142-589
Cow position: chr11:2567302-2567762 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 132

Conread position: 203-449
Cow position: chr11:80471626-80471868 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 95, 42

Conread position: 204-440
Cow position: chr11:8233950-8234180 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 133, 10

Conread position: 211-412
Cow position: chr11:84723482-84723284 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 158, 167

Conread position: 211-441
Cow position: chr11:62881334-62881559 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 106

Conread position: 211-531
Cow position: chr11:9079033-9079354 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 91

Conread position: 211-533
Cow position: chr11:8241802-8242130 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 211-560
Cow position: chr11:53280094-53280448 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 127

Conread position: 211-580
Cow position: chr11:7719210-7719584 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-580
Cow position: chr11:47757678-47758057 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 211-580
Cow position: chr11:63479155-63478782 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 119

Conread position: 211-587
Cow position: chr11:74389500-74389123 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 211-588
Cow position: chr11:43917739-43917356 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 129

Conread position: 211-588
Cow position: chr11:57624882-57625268 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 130

Conread position: 211-589
Cow position: chr11:1492568-1492927 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 125, 43

Conread position: 211-589
Cow position: chr11:2286018-2285634 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 211-589
Cow position: chr11:7386696-7386337 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 60

Conread position: 211-589
Cow position: chr11:12112235-12111848 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 129

Conread position: 211-589
Cow position: chr11:67453958-67453576 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 112

Conread position: 211-589
Cow position: chr11:74929113-74928724 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 273

Conread position: 211-589
Cow position: chr11:75354509-75354125 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 59

Conread position: 211-589
Cow position: chr11:80789083-80789470 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 108

Conread position: 216-580
Cow position: chr11:8499362-8498998 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 89

Conread position: 217-411
Cow position: chr11:37290591-37290390 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 217-589
Cow position: chr11:21896405-21896774 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 77

Conread position: 217-589
Cow position: chr11:38832180-38832556 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 217-589
Cow position: chr11:53428708-53429101 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 205

Conread position: 217-589
Cow position: chr11:74990920-74990541 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 221-589
Cow position: chr11:66943924-66944269 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 28

Conread position: 224-568
Cow position: chr11:10094160-10093813 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 86

Conread position: 227-582
Cow position: chr11:46032463-46032821 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 74

Conread position: 232-582
Cow position: chr11:4206465-4206103 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 250

Conread position: 232-589
Cow position: chr11:12077138-12077485 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 70

Conread position: 234-589
Cow position: chr11:38069581-38069216 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 68

Conread position: 235-589
Cow position: chr11:84134901-84135259 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 36

Conread position: 238-584
Cow position: chr11:21728741-21729093 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 244-587
Cow position: chr11:10365130-10365473 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 87

Conread position: 248-589
Cow position: chr11:3230589-3230245 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 255-589
Cow position: chr11:86579199-86578841 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 257-589
Cow position: chr11:3496302-3495964 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 259-589
Cow position: chr11:21620398-21620061 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 71

Conread position: 270-581
Cow position: chr11:7377265-7376951 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 116, 32

Conread position: 275-587
Cow position: chr11:17997693-17998010 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 196
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 94, 15

Conread position: 283-581
Cow position: chr11:77776822-77777123 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 57

Conread position: 301-587
Cow position: chr11:58804606-58804899 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 65

Conread position: 303-581
Cow position: chr11:40487366-40487083 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 306-581
Cow position: chr11:25808535-25808817 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 314-588
Cow position: chr11:4675430-4675693 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 127

Conread position: 330-581
Cow position: chr11:8018944-8018695 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 154

Conread position: 330-586
Cow position: chr11:38638143-38638400 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 118, 34

Conread position: 330-587
Cow position: chr11:18146357-18146623 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 6

Conread position: 330-589
Cow position: chr11:83285068-83284814 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 158

Conread position: 334-589
Cow position: chr11:21371898-21372160 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 336-589
Cow position: chr11:32108947-32108695 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 84

Conread position: 337-589
Cow position: chr11:10959009-10958750 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 199

Conread position: 340-581
Cow position: chr11:33733409-33733648 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 156

Conread position: 340-581
Cow position: chr11:48982462-48982224 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 108, 22

Conread position: 340-589
Cow position: chr11:56228106-56227850 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 141

Conread position: 342-589
Cow position: chr11:28631708-28631454 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 194

Conread position: 348-589
Cow position: chr11:17980127-17980371 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 16

Conread position: 348-589
Cow position: chr11:22933458-22933702 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 153

Conread position: 351-586
Cow position: chr11:66732294-66732055 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 72

Conread position: 354-584
Cow position: chr11:27922959-27922721 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 372-589
Cow position: chr11:13062263-13062486 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 374-589
Cow position: chr11:87154868-87155082 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 126

Conread position: 392-589
Cow position: chr11:59583554-59583351 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 141

Conread position: 407-587
Cow position: chr11:15128889-15128701 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 103

Conread position: 415-589
Cow position: chr11:81316780-81316955 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 12

Conread position: 446-589
Cow position: chr11:41177981-41177840 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 135, 50

Conread position: 447-581
Cow position: chr11:44875541-44875407 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 447-589
Cow position: chr11:52128273-52128130 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 83

Conread position: 3-455
Cow position: chr12:19040060-19040511 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-473
Cow position: chr12:43103629-43103139 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 87

Conread position: 3-477
Cow position: chr12:5800589-5800097 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-580
Cow position: chr12:1408641-1408032 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-580
Cow position: chr12:1774104-1774708 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 40

Conread position: 3-584
Cow position: chr12:22687290-22686708 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 3-589
Cow position: chr12:3181217-3180613 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 143

Conread position: 3-589
Cow position: chr12:10931897-10931289 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 3-589
Cow position: chr12:15821530-15820936 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 148

Conread position: 3-589
Cow position: chr12:17663762-17663167 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 3-589
Cow position: chr12:19869023-19868418 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 3-589
Cow position: chr12:24558387-24557784 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 55

Conread position: 3-589
Cow position: chr12:32849375-32848770 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 65

Conread position: 4-578
Cow position: chr12:23475556-23474969 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 6-572
Cow position: chr12:21718373-21718955 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 90

Conread position: 6-589
Cow position: chr12:15231824-15231239 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 210

Conread position: 9-377
Cow position: chr12:21578984-21579364 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 115

Conread position: 9-433
Cow position: chr12:37697673-37698107 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 120

Conread position: 9-577
Cow position: chr12:25839087-25838501 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr12:14214864-14214275 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr12:10359499-10358909 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 140

Conread position: 9-581
Cow position: chr12:30142214-30141632 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 9-587
Cow position: chr12:13042437-13043035 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-588
Cow position: chr12:3070662-3070063 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 9-589
Cow position: chr12:5227031-5226438 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 9-589
Cow position: chr12:14424160-14423554 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:15719767-15720358 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:21433145-21432545 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:21665941-21665340 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:25147817-25148414 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 9-589
Cow position: chr12:25265532-25266129 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 171

Conread position: 9-589
Cow position: chr12:28012427-28013027 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 9-589
Cow position: chr12:32010974-32011573 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr12:32758497-32757901 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 325

Conread position: 9-589
Cow position: chr12:36446188-36445591 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:37562804-37562211 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 256

Conread position: 9-589
Cow position: chr12:38894166-38893568 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr12:46111314-46111913 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-561
Cow position: chr12:25365234-25365784 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 11-578
Cow position: chr12:31217983-31217402 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 175

Conread position: 11-584
Cow position: chr12:6478641-6479223 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 146

Conread position: 12-580
Cow position: chr12:759195-758635 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 14

Conread position: 12-580
Cow position: chr12:21905169-21904573 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 12-589
Cow position: chr12:34177355-34176759 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-485
Cow position: chr12:22286135-22286625 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 13-589
Cow position: chr12:35311127-35311707 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 140

Conread position: 14-589
Cow position: chr12:22201882-22202477 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 17-507
Cow position: chr12:21946778-21946279 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 20-577
Cow position: chr12:6186361-6186929 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 22-589
Cow position: chr12:22749002-22748419 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 27-536
Cow position: chr12:9909765-9910278 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 122

Conread position: 27-588
Cow position: chr12:43681789-43681210 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 78

Conread position: 27-589
Cow position: chr12:25312932-25313509 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 29-455
Cow position: chr12:5146349-5145905 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 70

Conread position: 29-584
Cow position: chr12:29447591-29447017 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 94

Conread position: 30-589
Cow position: chr12:24981490-24980925 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 30-589
Cow position: chr12:41972993-41973568 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 45-589
Cow position: chr12:33297388-33296837 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 81

Conread position: 50-466
Cow position: chr12:21702109-21702503 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 169, 94

Conread position: 53-589
Cow position: chr12:5713721-5713168 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 68-589
Cow position: chr12:22480860-22480329 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 78

Conread position: 70-588
Cow position: chr12:48416012-48416541 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 76

Conread position: 72-458
Cow position: chr12:21723855-21723453 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 75

Conread position: 84-589
Cow position: chr12:7885151-7885683 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 353

Conread position: 108-460
Cow position: chr12:2511694-2512047 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 36

Conread position: 109-362
Cow position: chr12:28704679-28704419 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 37

Conread position: 141-589
Cow position: chr12:19198677-19198240 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 149-376
Cow position: chr12:27986973-27987221 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 130

Conread position: 211-584
Cow position: chr12:19871824-19871422 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 211-589
Cow position: chr12:1093489-1093106 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 106

Conread position: 211-589
Cow position: chr12:7674490-7674106 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr12:15939293-15939657 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 76, 68

Conread position: 211-589
Cow position: chr12:42604596-42604978 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 216-381
Cow position: chr12:24658137-24658293 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 216-588
Cow position: chr12:26869669-26870051 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 276

Conread position: 217-589
Cow position: chr12:18586254-18585877 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 218-581
Cow position: chr12:6105788-6106135 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 122

Conread position: 231-438
Cow position: chr12:6686504-6686296 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 106

Conread position: 235-580
Cow position: chr12:28571936-28571598 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 75

Conread position: 247-589
Cow position: chr12:5107610-5107262 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 82

Conread position: 252-589
Cow position: chr12:35547588-35547924 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 274-569
Cow position: chr12:6954838-6954547 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 25, 55

Conread position: 276-589
Cow position: chr12:259253-258934 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 28, 47

Conread position: 301-586
Cow position: chr12:8136491-8136782 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 54

Conread position: 311-587
Cow position: chr12:8774154-8773873 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 312-518
Cow position: chr12:36448643-36448857 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 330-486
Cow position: chr12:9894453-9894614 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 330-517
Cow position: chr12:45540864-45540671 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 330-589
Cow position: chr12:31260938-31261205 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 207

Conread position: 334-589
Cow position: chr12:19495912-19496170 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 17

Conread position: 336-580
Cow position: chr12:1476198-1476447 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 217

Conread position: 337-568
Cow position: chr12:3094159-3094397 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 349-580
Cow position: chr12:36213729-36213492 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 187

Conread position: 356-589
Cow position: chr12:27929350-27929587 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 25

Conread position: 386-580
Cow position: chr12:1108524-1108333 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 17

Conread position: 387-580
Cow position: chr12:39283104-39283303 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 395-572
Cow position: chr12:42795319-42795144 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 410-572
Cow position: chr12:41595611-41595443 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 91

Conread position: 411-589
Cow position: chr12:18936217-18936033 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 124

Conread position: 447-580
Cow position: chr12:42232657-42232524 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 83

Conread position: 447-589
Cow position: chr12:40306646-40306503 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 3-369
Cow position: chr13:15622249-15622620 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-469
Cow position: chr13:15538386-15538869 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-488
Cow position: chr13:30307015-30306513 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-545
Cow position: chr13:14716940-14716401 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 24

Conread position: 3-570
Cow position: chr13:21905314-21905896 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 34

Conread position: 3-577
Cow position: chr13:47357003-47357583 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 3-580
Cow position: chr13:4487454-4486859 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-580
Cow position: chr13:14302386-14302980 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position: chr13:14399475-14400070 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 3-580
Cow position: chr13:15446432-15446999 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 148

Conread position: 3-580
Cow position: chr13:34508244-34508819 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 53

Conread position: 3-583
Cow position: chr13:34904993-34905571 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-586
Cow position: chr13:34762434-34762989 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 183

Conread position: 3-589
Cow position: chr13:1881914-1882515 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr13:4664208-4663619 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 3-589
Cow position: chr13:9537836-9537237 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-589
Cow position: chr13:15280889-15280283 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 3-589
Cow position: chr13:22085369-22084766 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 78

Conread position: 3-589
Cow position: chr13:28413687-28414293 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 271

Conread position: 3-589
Cow position: chr13:30468517-30469122 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chr13:32773754-32774355 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 3-589
Cow position: chr13:34190817-34190243 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 32

Conread position: 3-589
Cow position: chr13:34345903-34345300 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr13:42114400-42114997 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 3-589
Cow position: chr13:48628136-48627547 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr13:49805357-49805946 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 5-542
Cow position: chr13:36075663-36076215 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 5-589
Cow position: chr13:13903456-13902852 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 9-429
Cow position: chr13:11290415-11289992 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 105

Conread position: 9-493
Cow position: chr13:11254060-11254565 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 9-493
Cow position: chr13:60219683-60219187 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 104

Conread position: 9-517
Cow position: chr13:2951100-2951609 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 329
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 29

Conread position: 9-536
Cow position: chr13:11252526-11253060 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 240

Conread position: 9-583
Cow position: chr13:13126135-13126713 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-587
Cow position: chr13:44323374-44323963 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-588
Cow position: chr13:6343476-6342880 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 9-589
Cow position: chr13:560793-561390 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 263

Conread position: 9-589
Cow position: chr13:5498210-5498806 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 138

Conread position: 9-589
Cow position: chr13:20571122-20571713 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 9-589
Cow position: chr13:28132098-28131502 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr13:32733596-32734191 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr13:35540996-35540400 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr13:36937314-36936727 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr13:38013074-38013658 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 98

Conread position: 9-589
Cow position: chr13:39911991-39911401 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr13:50113060-50112462 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-589
Cow position: chr13:53052431-53051832 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-589
Cow position: chr13:23266240-23266833 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 146

Conread position: 12-583
Cow position: chr13:52251486-52250920 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 12-587
Cow position: chr13:21135327-21134730 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 12-587
Cow position: chr13:22906689-22907269 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 13-584
Cow position: chr13:11821715-11822277 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 120

Conread position: 13-589
Cow position: chr13:20563391-20563985 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 15-487
Cow position: chr13:43119686-43120189 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 131

Conread position: 17-589
Cow position: chr13:8782474-8781904 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 18-580
Cow position: chr13:9049185-9048601 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 99

Conread position: 27-589
Cow position: chr13:20777891-20778469 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chr13:33162538-33161937 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 38-587
Cow position: chr13:31990433-31989872 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 117

Conread position: 39-449
Cow position: chr13:6418099-6417684 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 240

Conread position: 57-589
Cow position: chr13:3556957-3556408 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 89

Conread position: 69-589
Cow position: chr13:34871490-34870956 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 52

Conread position: 80-427
Cow position: chr13:10755355-10755719 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 129, 66

Conread position: 80-569
Cow position: chr13:26822623-26823114 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 196

Conread position: 207-580
Cow position: chr13:3784516-3784135 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 307

Conread position: 211-414
Cow position: chr13:12404049-12403844 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 114

Conread position: 211-421
Cow position: chr13:46428318-46428110 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 96, 129

Conread position: 211-426
Cow position: chr13:20175890-20176097 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 63

Conread position: 211-523
Cow position: chr13:12572064-12572380 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 211-581
Cow position: chr13:24703020-24703392 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 239
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 117

Conread position: 211-584
Cow position: chr13:16248565-16248940 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 117

Conread position: 211-587
Cow position: chr13:34052004-34051620 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 211-589
Cow position: chr13:11826403-11826756 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 60

Conread position: 211-589
Cow position: chr13:28700198-28699816 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 19

Conread position: 211-589
Cow position: chr13:38897681-38897310 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 95

Conread position: 211-589
Cow position: chr13:60465634-60466018 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 216-580
Cow position: chr13:39944863-39944512 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 45

Conread position: 217-569
Cow position: chr13:9301531-9301181 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 85

Conread position: 217-580
Cow position: chr13:30241938-30241571 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 52

Conread position: 217-581
Cow position: chr13:16344779-16345139 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 67

Conread position: 217-584
Cow position: chr13:31510515-31510146 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 227-589
Cow position: chr13:25694830-25694495 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 61

Conread position: 231-580
Cow position: chr13:9570656-9571007 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 232-589
Cow position: chr13:2804923-2805286 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 233-525
Cow position: chr13:47313337-47313637 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 248-589
Cow position: chr13:60426377-60426023 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 79

Conread position: 255-570
Cow position: chr13:60392872-60392550 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 83

Conread position: 261-589
Cow position: chr13:15429596-15429939 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 255

Conread position: 262-589
Cow position: chr13:6718835-6719168 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 262-589
Cow position: chr13:48945610-48945940 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 190

Conread position: 263-589
Cow position: chr13:33907434-33907760 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 67

Conread position: 266-589
Cow position: chr13:19843789-19843466 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 37

Conread position: 272-576
Cow position: chr13:47189330-47189027 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 30

Conread position: 281-456
Cow position: chr13:11148782-11148952 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 102

Conread position: 298-441
Cow position: chr13:42249515-42249658 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 42

Conread position: 307-589
Cow position: chr13:54238166-54238447 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 65, 23

Conread position: 330-589
Cow position: chr13:5331598-5331334 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 60

Conread position: 331-589
Cow position: chr13:19393863-19394126 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 237

Conread position: 339-589
Cow position: chr13:30652031-30652289 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 340-584
Cow position: chr13:15257140-15256888 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 347-589
Cow position: chr13:58718790-58718552 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 21

Conread position: 349-580
Cow position: chr13:32955221-32955454 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 34

Conread position: 349-580
Cow position: chr13:32982162-32982395 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 34

Conread position: 349-589
Cow position: chr13:34376286-34376533 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 350-580
Cow position: chr13:17277393-17277165 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 112

Conread position: 358-589
Cow position: chr13:7609377-7609141 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 5

Conread position: 370-584
Cow position: chr13:18097401-18097620 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 378-589
Cow position: chr13:3001138-3001355 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 381-589
Cow position: chr13:17318168-17318380 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 120

Conread position: 392-580
Cow position: chr13:32016966-32016779 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 396-589
Cow position: chr13:20538350-20538548 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 9

Conread position: 396-589
Cow position: chr13:45933946-45933747 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 139

Conread position: 403-589
Cow position: chr13:504522-504330 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 132

Conread position: 413-589
Cow position: chr13:46427898-46427717 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 127

Conread position: 425-589
Cow position: chr13:19566887-19566717 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 110

Conread position: 442-589
Cow position: chr13:47301769-47301621 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 88

Conread position: 447-585
Cow position: chr13:42250351-42250492 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 447-587
Cow position: chr13:53574939-53575075 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 46

Conread position: 3-375
Cow position: chr14:25779549-25779930 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 147

Conread position: 3-452
Cow position: chr14:47608922-47608476 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 313
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 123, 12

Conread position: 3-456
Cow position: chr14:22047104-22047561 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 3-485
Cow position: chr14:13385821-13386312 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 182

Conread position: 3-512
Cow position: chr14:40346730-40346203 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-512
Cow position: chr14:46489809-46489296 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 34

Conread position: 3-520
Cow position: chr14:38379731-38380248 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 104

Conread position: 3-555
Cow position: chr14:37677829-37677281 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 40

Conread position: 3-568
Cow position: chr14:32583564-32584141 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position: chr14:20786852-20786260 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 3-580
Cow position: chr14:28796117-28796701 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-580
Cow position: chr14:35382032-35382613 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 3-580
Cow position: chr14:44382750-44382155 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-581
Cow position: chr14:31400037-31400611 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 3-581
Cow position: chr14:34906996-34906400 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr14:12613687-12613100 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 3-588
Cow position: chr14:5532810-5532209 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 340

Conread position: 3-589
Cow position: chr14:193619-193016 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-589
Cow position: chr14:1727616-1727012 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr14:9875833-9876416 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 3-589
Cow position: chr14:11150445-11151050 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-589
Cow position: chr14:12739578-12740183 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr14:13309201-13308598 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr14:17690596-17689994 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr14:28992882-28993482 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr14:33834540-33835144 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 3-589
Cow position: chr14:34675569-34674966 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 5-420
Cow position: chr14:41962095-41962521 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 144

Conread position: 6-587
Cow position: chr14:45848620-45848026 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 9-365
Cow position: chr14:20746027-20746399 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 9-395
Cow position: chr14:16996284-16996683 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 9-478
Cow position: chr14:4991715-4992181 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 125

Conread position: 9-536
Cow position: chr14:43564922-43564378 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 9-572
Cow position: chr14:36109374-36109942 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 104

Conread position: 9-580
Cow position: chr14:9483412-9482827 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr14:21201374-21200795 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 151

Conread position: 9-582
Cow position: chr14:30581000-30581590 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr14:445834-446401 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 9-589
Cow position: chr14:2289712-2289119 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr14:5645873-5645272 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr14:9449078-9449666 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 9-589
Cow position: chr14:9812145-9811547 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr14:10311031-10310425 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 9-589
Cow position: chr14:11461614-11462214 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr14:13370686-13370093 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 9-589
Cow position: chr14:13860085-13860675 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 9-589
Cow position: chr14:17219774-17219189 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 116

Conread position: 9-589
Cow position: chr14:17761935-17762523 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 125

Conread position: 9-589
Cow position: chr14:24896135-24895537 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr14:28350248-28350832 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 9-589
Cow position: chr14:31156290-31155691 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr14:34168763-34168164 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr14:38047641-38047046 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr14:38436482-38435897 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 68

Conread position: 9-589
Cow position: chr14:39301922-39301333 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 165

Conread position: 9-589
Cow position: chr14:41479205-41478615 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 138

Conread position: 9-589
Cow position: chr14:42849154-42849736 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-589
Cow position: chr14:43561630-43561069 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr14:46960852-46960253 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-540
Cow position: chr14:48707652-48707118 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 11-537
Cow position: chr14:3437733-3438260 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 12-411
Cow position: chr14:27844784-27844378 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 12-509
Cow position: chr14:46966817-46967320 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 201

Conread position: 12-580
Cow position: chr14:22026318-22026898 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 17

Conread position: 13-580
Cow position: chr14:48571893-48572478 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-568
Cow position: chr14:38016991-38016438 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 15-589
Cow position: chr14:12483853-12483267 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 16-580
Cow position: chr14:41716762-41717351 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 18-589
Cow position: chr14:48495686-48495108 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 27-566
Cow position: chr14:37334540-37335086 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 27-576
Cow position: chr14:30739103-30738529 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 67

Conread position: 29-494
Cow position: chr14:9020497-9020975 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 35-441
Cow position: chr14:31759145-31759557 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 38-502
Cow position: chr14:35589104-35588637 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 107

Conread position: 38-581
Cow position: chr14:19028482-19027931 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 366
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 36

Conread position: 38-587
Cow position: chr14:13810602-13811167 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 109

Conread position: 38-588
Cow position: chr14:26496341-26496907 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 111

Conread position: 44-580
Cow position: chr14:24923211-24922659 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 102

Conread position: 45-416
Cow position: chr14:47600392-47600014 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 89

Conread position: 45-589
Cow position: chr14:8517942-8517380 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 110

Conread position: 50-589
Cow position: chr14:12903756-12903200 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 56-487
Cow position: chr14:21389972-21390408 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 96

Conread position: 56-589
Cow position: chr14:424588-424051 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 57-468
Cow position: chr14:41756778-41757201 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 145, 89

Conread position: 67-580
Cow position: chr14:24980953-24980423 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 69-580
Cow position: chr14:21728418-21727901 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 76

Conread position: 69-589
Cow position: chr14:19490388-19489847 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 117-589
Cow position: chr14:40475367-40475848 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 117-589
Cow position: chr14:50068843-50069332 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 29

Conread position: 149-589
Cow position: chr14:32471579-32472034 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 202

Conread position: 207-580
Cow position: chr14:32450210-32449832 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 82

Conread position: 210-589
Cow position: chr14:23527748-23528130 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 88

Conread position: 211-493
Cow position: chr14:13276323-13276043 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 93, 29

Conread position: 211-512
Cow position: chr14:28496789-28497098 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 117

Conread position: 211-579
Cow position: chr14:5501173-5500811 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 99

Conread position: 211-581
Cow position: chr14:46304102-46303724 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 251

Conread position: 211-584
Cow position: chr14:14030163-14030526 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 92

Conread position: 211-589
Cow position: chr14:32500411-32500038 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr14:38652161-38651777 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 213-401
Cow position: chr14:38295553-38295364 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 123

Conread position: 213-589
Cow position: chr14:22689651-22690030 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 58

Conread position: 216-589
Cow position: chr14:45025384-45025763 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 124

Conread position: 217-580
Cow position: chr14:12066200-12066572 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 217-589
Cow position: chr14:7476100-7475723 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 112

Conread position: 217-589
Cow position: chr14:50141781-50142157 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 63

Conread position: 218-589
Cow position: chr14:29044430-29044807 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 120

Conread position: 218-589
Cow position: chr14:37444211-37443834 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 218-589
Cow position: chr14:47872881-47873258 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 222-589
Cow position: chr14:8998843-8998480 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 80

Conread position: 230-589
Cow position: chr14:44555071-44554712 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 235-589
Cow position: chr14:13105164-13104807 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 235-589
Cow position: chr14:46225393-46225046 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 135, 66

Conread position: 237-589
Cow position: chr14:34354761-34354416 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 65

Conread position: 240-589
Cow position: chr14:29341232-29340880 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 83

Conread position: 257-589
Cow position: chr14:8925300-8924962 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 66

Conread position: 263-455
Cow position: chr14:12859341-12859530 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 76

Conread position: 265-512
Cow position: chr14:46375002-46375257 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 132

Conread position: 267-470
Cow position: chr14:2171872-2171664 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 35

Conread position: 267-584
Cow position: chr14:25363230-25363563 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 151

Conread position: 272-533
Cow position: chr14:47937925-47938187 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 55

Conread position: 284-572
Cow position: chr14:41211893-41212177 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 56

Conread position: 286-589
Cow position: chr14:34763904-34763595 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 37

Conread position: 330-447
Cow position: chr14:25886445-25886563 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 330-503
Cow position: chr14:47585010-47584831 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 50

Conread position: 330-581
Cow position: chr14:23813838-23814089 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 72

Conread position: 330-589
Cow position: chr14:34629062-34629329 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 12, 224

Conread position: 333-583
Cow position: chr14:105799-105546 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 149

Conread position: 337-588
Cow position: chr14:41219923-41220181 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 199

Conread position: 347-587
Cow position: chr14:46636426-46636667 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 174

Conread position: 347-589
Cow position: chr14:48360771-48361003 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 115

Conread position: 364-581
Cow position: chr14:21540822-21541037 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 156

Conread position: 365-589
Cow position: chr14:19419190-19418960 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 170

Conread position: 367-589
Cow position: chr14:24797596-24797824 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 168

Conread position: 373-589
Cow position: chr14:48491647-48491435 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 20

Conread position: 447-589
Cow position: chr14:13683575-13683432 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 83

Conread position: 3-404
Cow position: chr15:52154242-52153845 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 24

Conread position: 3-426
Cow position: chr15:29340631-29341062 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 3-433
Cow position: chr15:49191091-49191534 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 3-441
Cow position: chr15:25907720-25908168 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-456
Cow position: chr15:22751953-22752422 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 3-540
Cow position: chr15:46431848-46431310 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 348
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 159

Conread position: 3-557
Cow position: chr15:8937870-8937313 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 3-567
Cow position: chr15:14572850-14573418 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 61

Conread position: 3-569
Cow position: chr15:34140508-34141091 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 319

Conread position: 3-578
Cow position: chr15:4689500-4688914 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 108

Conread position: 3-580
Cow position: chr15:608649-609239 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 150

Conread position: 3-580
Cow position: chr15:6550139-6550734 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-580
Cow position: chr15:7962585-7963155 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 101

Conread position: 3-580
Cow position: chr15:20347797-20348386 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 3-580
Cow position: chr15:21826341-21825745 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position: chr15:38683683-38684252 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 238

Conread position: 3-580
Cow position: chr15:45245061-45244479 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 3-583
Cow position: chr15:5040847-5040296 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 369
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 64

Conread position: 3-584
Cow position: chr15:1329612-1329034 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 144

Conread position: 3-587
Cow position: chr15:4769978-4769376 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-587
Cow position: chr15:19725220-19724641 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 382

Conread position: 3-588
Cow position: chr15:18661959-18661358 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 3-589
Cow position: chr15:1776635-1776031 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr15:4713383-4712777 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr15:4829803-4829206 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 3-589
Cow position: chr15:4925619-4925028 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 121

Conread position: 3-589
Cow position: chr15:5640116-5640721 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr15:7320030-7319436 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 3-589
Cow position: chr15:7575277-7574671 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr15:13076999-13076390 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 102

Conread position: 3-589
Cow position: chr15:13387864-13388477 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 124

Conread position: 3-589
Cow position: chr15:20352336-20352932 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr15:33228581-33229181 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 155

Conread position: 3-589
Cow position: chr15:37382117-37382719 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr15:39090756-39091328 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 34

Conread position: 3-589
Cow position: chr15:40343782-40344378 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr15:44073921-44073317 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr15:50344263-50344860 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 4-589
Cow position: chr15:24797302-24796735 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 144

Conread position: 5-589
Cow position: chr15:36671629-36671045 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 6-589
Cow position: chr15:25164632-25165234 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 141

Conread position: 9-438
Cow position: chr15:4918560-4918133 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 134

Conread position: 9-502
Cow position: chr15:16968148-16967640 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 67

Conread position: 9-537
Cow position: chr15:44165081-44164533 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 9-572
Cow position: chr15:53342487-53341898 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 385
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 7

Conread position: 9-578
Cow position: chr15:32715168-32714583 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr15:13545624-13546172 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 129

Conread position: 9-580
Cow position: chr15:17399439-17398851 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-580
Cow position: chr15:28486674-28487249 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr15:32064831-32065409 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 9-581
Cow position: chr15:8629773-8629187 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 108

Conread position: 9-581
Cow position: chr15:37395171-37394606 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-584
Cow position: chr15:49307262-49306670 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 9-587
Cow position: chr15:2805805-2806382 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 9-587
Cow position: chr15:11628865-11628274 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 9-587
Cow position: chr15:21807318-21806721 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 327

Conread position: 9-589
Cow position: chr15:28840-29438 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr15:482032-481454 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 138

Conread position: 9-589
Cow position: chr15:1774915-1774316 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 140

Conread position: 9-589
Cow position: chr15:1786228-1785636 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr15:5984098-5983497 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 127

Conread position: 9-589
Cow position: chr15:6647948-6648540 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 59

Conread position: 9-589
Cow position: chr15:7268065-7267471 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 112

Conread position: 9-589
Cow position: chr15:7548312-7547737 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 9-589
Cow position: chr15:7566468-7565873 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 42

Conread position: 9-589
Cow position: chr15:7586328-7586911 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 9-589
Cow position: chr15:7941885-7941289 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-589
Cow position: chr15:13683788-13683213 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 34

Conread position: 9-589
Cow position: chr15:17073894-17074493 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 9-589
Cow position: chr15:21608230-21607644 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr15:21637742-21637141 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr15:22759531-22760134 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 335

Conread position: 9-589
Cow position: chr15:25463059-25463654 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr15:35749827-35750426 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr15:36328993-36329590 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 9-589
Cow position: chr15:36939914-36940512 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 138

Conread position: 9-589
Cow position: chr15:42727840-42727253 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 9-589
Cow position: chr15:50142728-50142129 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-441
Cow position: chr15:24968288-24968740 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 137

Conread position: 10-589
Cow position: chr15:23561495-23560904 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 318

Conread position: 11-589
Cow position: chr15:16741525-16740927 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 12-476
Cow position: chr15:21967710-21967234 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 320

Conread position: 12-507
Cow position: chr15:31086059-31086546 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 38

Conread position: 12-581
Cow position: chr15:6152178-6152765 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 135

Conread position: 12-587
Cow position: chr15:2015934-2015346 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 12-588
Cow position: chr15:7511891-7512485 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 134

Conread position: 12-589
Cow position: chr15:442324-442918 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr15:4728615-4728034 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 13-580
Cow position: chr15:35838567-35837993 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr15:3893049-3892456 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 323

Conread position: 13-589
Cow position: chr15:35417067-35416466 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 17-578
Cow position: chr15:22095615-22096185 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 90

Conread position: 27-589
Cow position: chr15:31768099-31768679 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 121

Conread position: 32-589
Cow position: chr15:312358-312931 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 114

Conread position: 33-589
Cow position: chr15:794496-793926 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 114

Conread position: 45-589
Cow position: chr15:6588503-6589063 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 94

Conread position: 56-574
Cow position: chr15:6163685-6164217 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 58-580
Cow position: chr15:25133381-25132837 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 88

Conread position: 69-586
Cow position: chr15:6331504-6330995 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 83

Conread position: 71-589
Cow position: chr15:18018991-18019515 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 72

Conread position: 87-580
Cow position: chr15:35643076-35643571 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 59

Conread position: 98-589
Cow position: chr15:20172618-20173119 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 48

Conread position: 108-587
Cow position: chr15:2669942-2670418 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 334
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 101, 38

Conread position: 109-580
Cow position: chr15:42940276-42939791 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 112-589
Cow position: chr15:44297515-44297993 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 211-410
Cow position: chr15:13641342-13641145 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 127

Conread position: 211-436
Cow position: chr15:23057308-23057532 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 129

Conread position: 211-456
Cow position: chr15:39407014-39407265 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 211-557
Cow position: chr15:21156703-21156359 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 234, 13

Conread position: 211-578
Cow position: chr15:4953572-4953209 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 158, 87

Conread position: 211-580
Cow position: chr15:19734545-19734919 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-580
Cow position: chr15:35739483-35739120 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 108

Conread position: 211-583
Cow position: chr15:10736817-10736444 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 211-587
Cow position: chr15:16515456-16515083 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 63

Conread position: 211-589
Cow position: chr15:678315-677931 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr15:16784574-16784196 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr15:18264507-18264892 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr15:22539586-22539969 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 33

Conread position: 211-589
Cow position: chr15:26591096-26591476 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 93

Conread position: 212-428
Cow position: chr15:50956762-50956536 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 34

Conread position: 214-566
Cow position: chr15:29811470-29811850 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 333

Conread position: 216-589
Cow position: chr15:11574771-11575141 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 113

Conread position: 217-580
Cow position: chr15:4628993-4629366 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 93

Conread position: 217-589
Cow position: chr15:2080578-2080201 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 113

Conread position: 217-589
Cow position: chr15:17236644-17237004 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 71

Conread position: 217-589
Cow position: chr15:30045655-30045268 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 114

Conread position: 218-589
Cow position: chr15:51910286-51910666 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 195

Conread position: 221-584
Cow position: chr15:8754100-8753737 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 95, 67

Conread position: 221-589
Cow position: chr15:6367246-6367617 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 92

Conread position: 227-539
Cow position: chr15:52390558-52390889 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 258

Conread position: 231-473
Cow position: chr15:53693243-53693000 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 20

Conread position: 231-524
Cow position: chr15:30811855-30811561 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 138, 61

Conread position: 232-579
Cow position: chr15:33304564-33304906 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 232-588
Cow position: chr15:47201341-47201698 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 110

Conread position: 237-586
Cow position: chr15:22532926-22533281 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 243-473
Cow position: chr15:53356985-53357225 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 59

Conread position: 244-542
Cow position: chr15:51228336-51228034 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 87

Conread position: 244-581
Cow position: chr15:26158230-26157887 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 58

Conread position: 248-577
Cow position: chr15:20647382-20647047 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 82

Conread position: 266-589
Cow position: chr15:36622472-36622792 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 57

Conread position: 282-570
Cow position: chr15:33455545-33455261 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 55

Conread position: 304-562
Cow position: chr15:13981228-13981486 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 19

Conread position: 306-589
Cow position: chr15:36355905-36356199 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 311-583
Cow position: chr15:35892-35621 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 28

Conread position: 314-487
Cow position: chr15:6043749-6043578 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 55, 25

Conread position: 320-580
Cow position: chr15:29273100-29273362 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 180

Conread position: 340-581
Cow position: chr15:7325270-7325506 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 38

Conread position: 348-583
Cow position: chr15:21831056-21830814 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 349-589
Cow position: chr15:23774413-23774173 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 113

Conread position: 349-589
Cow position: chr15:25554256-25554012 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 122

Conread position: 353-580
Cow position: chr15:32490778-32491010 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 98, 182

Conread position: 356-588
Cow position: chr15:8102554-8102322 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 175

Conread position: 356-589
Cow position: chr15:21644717-21644951 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 106

Conread position: 361-589
Cow position: chr15:43267204-43266978 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 18

Conread position: 365-509
Cow position: chr15:1837915-1838064 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 365-589
Cow position: chr15:10826534-10826306 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 106

Conread position: 389-589
Cow position: chr15:26077800-26077604 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 100

Conread position: 392-578
Cow position: chr15:13286033-13286223 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 44

Conread position: 395-580
Cow position: chr15:1298586-1298773 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 105

Conread position: 396-589
Cow position: chr15:38937835-38937638 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 416-581
Cow position: chr15:29899380-29899214 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 78

Conread position: 2-589
Cow position: chr16:43894135-43894740 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 148

Conread position: 3-375
Cow position: chr16:23472348-23471966 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 3-417
Cow position: chr16:7701902-7701468 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-468
Cow position: chr16:46223386-46223867 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 48

Conread position: 3-476
Cow position: chr16:18949205-18948724 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 125

Conread position: 3-490
Cow position: chr16:14758310-14757810 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 3-508
Cow position: chr16:45799465-45798951 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 3-557
Cow position: chr16:2223809-2224394 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 3-560
Cow position: chr16:32118704-32118131 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 144

Conread position: 3-568
Cow position: chr16:15188182-15187608 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-568
Cow position: chr16:15495563-15494998 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 76

Conread position: 3-569
Cow position: chr16:51641378-51640792 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 354

Conread position: 3-572
Cow position: chr16:39033225-39033805 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr16:49253142-49253713 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 3-581
Cow position: chr16:23532874-23533468 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-581
Cow position: chr16:49515658-49516252 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-587
Cow position: chr16:17142526-17141927 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 101

Conread position: 3-589
Cow position: chr16:5435951-5435347 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-589
Cow position: chr16:5488998-5488393 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr16:7456861-7457460 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr16:10441366-10440761 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr16:11055089-11054513 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 24

Conread position: 3-589
Cow position: chr16:14029028-14029626 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-589
Cow position: chr16:18744913-18745508 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 3-589
Cow position: chr16:20205107-20204526 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr16:25454352-25454938 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 138

Conread position: 3-589
Cow position: chr16:46555549-46554944 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chr16:50712312-50712917 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr16:51087907-51087306 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 3-589
Cow position: chr16:52527355-52526755 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr16:56913117-56913712 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 4-568
Cow position: chr16:3333019-3332447 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 149

Conread position: 4-580
Cow position: chr16:25445002-25444408 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 4-587
Cow position: chr16:44676485-44675877 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 148

Conread position: 5-589
Cow position: chr16:45534578-45533984 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 7-433
Cow position: chr16:23872059-23872482 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 9-428
Cow position: chr16:56149899-56149472 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 9-516
Cow position: chr16:14441475-14440980 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 188

Conread position: 9-576
Cow position: chr16:46385428-46386003 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 9-583
Cow position: chr16:25345094-25344508 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 9-589
Cow position: chr16:1563266-1563866 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr16:4972436-4973003 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 9-589
Cow position: chr16:5524980-5525577 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr16:13043336-13042765 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 9-589
Cow position: chr16:14040546-14039947 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-589
Cow position: chr16:14100959-14100374 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 9-589
Cow position: chr16:15312409-15311803 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 9-589
Cow position: chr16:16149628-16150226 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 326

Conread position: 9-589
Cow position: chr16:16540518-16539931 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr16:19082167-19081574 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr16:22798592-22799182 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 172

Conread position: 9-589
Cow position: chr16:25880436-25879838 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr16:26627872-26627274 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr16:28193180-28193778 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 9-589
Cow position: chr16:29538702-29539285 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 188

Conread position: 9-589
Cow position: chr16:41034426-41033821 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 9-589
Cow position: chr16:47404495-47403904 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 336

Conread position: 9-589
Cow position: chr16:50189999-50190592 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 140

Conread position: 9-589
Cow position: chr16:53509399-53510002 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 10-589
Cow position: chr16:29512881-29512299 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 10-589
Cow position: chr16:47368093-47367508 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 251

Conread position: 11-584
Cow position: chr16:27013509-27012930 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 12-446
Cow position: chr16:47518435-47517980 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 152

Conread position: 12-517
Cow position: chr16:28864112-28864614 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 345
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 100, 26

Conread position: 12-589
Cow position: chr16:26500750-26500185 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 13-477
Cow position: chr16:14722156-14722626 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 133

Conread position: 13-584
Cow position: chr16:24926163-24925581 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 13-588
Cow position: chr16:8481497-8482095 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 469

Conread position: 17-572
Cow position: chr16:48341099-48341667 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 45

Conread position: 18-558
Cow position: chr16:15179778-15179245 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 137

Conread position: 21-589
Cow position: chr16:23737761-23737215 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 116

Conread position: 22-441
Cow position: chr16:22810469-22810888 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 66

Conread position: 27-506
Cow position: chr16:840372-839877 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 27-589
Cow position: chr16:18975971-18975390 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 28-589
Cow position: chr16:13721486-13722067 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 28-589
Cow position: chr16:20634140-20634692 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 33-377
Cow position: chr16:30143874-30144211 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 54

Conread position: 45-465
Cow position: chr16:26671053-26671478 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 110

Conread position: 45-588
Cow position: chr16:41622-41059 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 104

Conread position: 51-583
Cow position: chr16:1957661-1958199 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 21

Conread position: 54-589
Cow position: chr16:192864-193413 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 101

Conread position: 57-447
Cow position: chr16:40913681-40913288 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 7

Conread position: 67-589
Cow position: chr16:1734798-1734260 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 69-569
Cow position: chr16:9786376-9785858 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 138

Conread position: 70-520
Cow position: chr16:48494857-48495326 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 89

Conread position: 72-580
Cow position: chr16:26666767-26666236 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 74

Conread position: 82-589
Cow position: chr16:45609456-45608937 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 87-589
Cow position: chr16:37477819-37478339 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 59

Conread position: 96-589
Cow position: chr16:702282-701783 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 100-580
Cow position: chr16:49577997-49577523 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 50

Conread position: 117-411
Cow position: chr16:1223650-1223956 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 44

Conread position: 149-479
Cow position: chr16:18205214-18204861 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 126

Conread position: 165-589
Cow position: chr16:23563400-23562976 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 207-580
Cow position: chr16:21018469-21018091 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 207-581
Cow position: chr16:44046-43693 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 207-584
Cow position: chr16:37058090-37058482 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 373

Conread position: 210-539
Cow position: chr16:11007621-11007273 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 116

Conread position: 211-490
Cow position: chr16:44972842-44973125 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 122

Conread position: 211-512
Cow position: chr16:23059185-23059487 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 62

Conread position: 211-579
Cow position: chr16:7504339-7503972 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 119

Conread position: 211-580
Cow position: chr16:417801-417427 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-580
Cow position: chr16:43770252-43770619 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 60

Conread position: 211-581
Cow position: chr16:41623805-41624148 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 76

Conread position: 211-589
Cow position: chr16:7303663-7303278 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 128

Conread position: 211-589
Cow position: chr16:15570671-15570291 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 116

Conread position: 211-589
Cow position: chr16:25169131-25168759 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 61

Conread position: 211-589
Cow position: chr16:27730475-27730859 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chr16:40879498-40879114 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr16:42073988-42074377 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 44

Conread position: 216-507
Cow position: chr16:16237082-16237375 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 84, 28

Conread position: 216-568
Cow position: chr16:7541381-7541030 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 29

Conread position: 216-569
Cow position: chr16:16267018-16267357 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 87

Conread position: 216-589
Cow position: chr16:14351782-14352160 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 116

Conread position: 217-587
Cow position: chr16:49142176-49142549 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 53

Conread position: 217-589
Cow position: chr16:51400658-51401025 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 86

Conread position: 218-536
Cow position: chr16:34833290-34833607 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 130

Conread position: 218-580
Cow position: chr16:18426290-18425936 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 10

Conread position: 218-580
Cow position: chr16:26990042-26990408 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 78

Conread position: 219-418
Cow position: chr16:21096132-21096333 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 119

Conread position: 219-501
Cow position: chr16:20667371-20667090 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 108

Conread position: 232-433
Cow position: chr16:28112643-28112838 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 92

Conread position: 232-589
Cow position: chr16:48411520-48411157 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 108

Conread position: 234-507
Cow position: chr16:23300604-23300347 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 74, 68

Conread position: 240-589
Cow position: chr16:8871564-8871917 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 243

Conread position: 240-589
Cow position: chr16:12737158-12736802 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 83

Conread position: 255-476
Cow position: chr16:16625217-16624991 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 47

Conread position: 261-587
Cow position: chr16:5833660-5833325 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 110

Conread position: 262-579
Cow position: chr16:45560157-45559826 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 117

Conread position: 272-589
Cow position: chr16:18694121-18694450 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 65

Conread position: 297-580
Cow position: chr16:3349826-3349542 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 82

Conread position: 298-589
Cow position: chr16:53612619-53612325 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 303-589
Cow position: chr16:49388101-49387810 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 36

Conread position: 313-589
Cow position: chr16:7155408-7155126 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 141

Conread position: 313-589
Cow position: chr16:49219148-49219427 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 118

Conread position: 319-588
Cow position: chr16:45703996-45704272 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 329-580
Cow position: chr16:37454698-37454949 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 40, 60

Conread position: 329-587
Cow position: chr16:25954802-25955059 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 35

Conread position: 330-587
Cow position: chr16:24445240-24444965 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 256

Conread position: 335-589
Cow position: chr16:55868104-55867850 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 94

Conread position: 337-580
Cow position: chr16:25088398-25088141 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 337-589
Cow position: chr16:42751924-42751673 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 43

Conread position: 340-589
Cow position: chr16:45754853-45755097 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 150

Conread position: 348-589
Cow position: chr16:29093891-29093643 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 356-589
Cow position: chr16:13601882-13602115 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 22

Conread position: 364-589
Cow position: chr16:21190011-21189780 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 171

Conread position: 366-589
Cow position: chr16:39475585-39475351 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 158

Conread position: 371-589
Cow position: chr16:48371357-48371581 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 87, 0

Conread position: 382-581
Cow position: chr16:819700-819501 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 112

Conread position: 392-581
Cow position: chr16:658675-658491 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 104

Conread position: 393-580
Cow position: chr16:5763563-5763374 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 108

Conread position: 394-581
Cow position: chr16:54293667-54293480 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 97

Conread position: 396-588
Cow position: chr16:34533011-34532817 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 102

Conread position: 400-581
Cow position: chr16:51041252-51041078 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 420-589
Cow position: chr16:26388471-26388643 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 115

Conread position: 446-587
Cow position: chr16:27710539-27710676 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 451-581
Cow position: chr16:46223976-46224100 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 39

Conread position: 457-588
Cow position: chr16:2395017-2394885 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 3-407
Cow position: chr17:4107380-4107796 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 100

Conread position: 3-456
Cow position: chr17:7700075-7699605 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 294
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 150, 277

Conread position: 3-482
Cow position: chr17:41014845-41014358 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 3-491
Cow position: chr17:42258542-42258062 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 3-553
Cow position: chr17:40802448-40801871 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 3-574
Cow position: chr17:36265597-36266171 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 3-580
Cow position: chr17:18201413-18200829 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 3-581
Cow position: chr17:27978791-27978192 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 148

Conread position: 3-581
Cow position: chr17:29083841-29083268 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 40

Conread position: 3-581
Cow position: chr17:36746834-36747430 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 3-582
Cow position: chr17:29472118-29471529 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 145

Conread position: 3-583
Cow position: chr17:15351737-15351133 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 401
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 18

Conread position: 3-589
Cow position: chr17:148595-148004 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr17:2201984-2201379 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-589
Cow position: chr17:8205618-8205028 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 153

Conread position: 3-589
Cow position: chr17:8223390-8222787 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position: chr17:15439477-15438873 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 112

Conread position: 3-589
Cow position: chr17:16117795-16118377 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 3-589
Cow position: chr17:20215767-20215165 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr17:21666686-21666086 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr17:22563825-22563227 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 3-589
Cow position: chr17:37415230-37415806 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 4-437
Cow position: chr17:5898891-5899321 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 301
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 93

Conread position: 4-576
Cow position: chr17:29157067-29156469 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 4-582
Cow position: chr17:6072213-6071628 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 4-589
Cow position: chr17:15328964-15328363 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 143

Conread position: 4-589
Cow position: chr17:40811402-40810833 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 143

Conread position: 6-589
Cow position: chr17:20093490-20094076 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 9-416
Cow position: chr17:13716626-13717033 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 9-452
Cow position: chr17:20507911-20508359 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 306

Conread position: 9-542
Cow position: chr17:31780796-31781341 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 353
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 41, 345

Conread position: 9-568
Cow position: chr17:16446801-16447378 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 116

Conread position: 9-580
Cow position: chr17:2177653-2177072 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 114

Conread position: 9-580
Cow position: chr17:4480202-4480790 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr17:6123464-6122875 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 9-580
Cow position: chr17:14243513-14242918 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr17:23320741-23321327 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 9-581
Cow position: chr17:12477543-12476964 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 175

Conread position: 9-581
Cow position: chr17:20090965-20091518 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 9-589
Cow position: chr17:2265869-2265271 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 327

Conread position: 9-589
Cow position: chr17:6612703-6612104 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr17:14212340-14212936 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 9-589
Cow position: chr17:19214729-19215313 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr17:20546818-20546219 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr17:24026304-24026901 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr17:27791114-27791700 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr17:29080005-29079462 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 9-589
Cow position: chr17:29824279-29824879 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr17:36284948-36284349 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr17:43470910-43471509 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-589
Cow position: chr17:1568541-1569132 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 64

Conread position: 12-589
Cow position: chr17:3306262-3305657 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 77

Conread position: 13-588
Cow position: chr17:21767568-21766980 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr17:20391451-20390856 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr17:38992430-38991835 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 14-589
Cow position: chr17:1970827-1970233 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 133

Conread position: 26-589
Cow position: chr17:21717126-21716544 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 27-563
Cow position: chr17:453488-452955 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-587
Cow position: chr17:2179491-2178933 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 27-589
Cow position: chr17:13921891-13921324 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 94

Conread position: 28-580
Cow position: chr17:4211591-4211022 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 33-581
Cow position: chr17:8450369-8449804 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 50-589
Cow position: chr17:15375009-15374487 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 90

Conread position: 58-428
Cow position: chr17:11386085-11385705 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 69

Conread position: 62-589
Cow position: chr17:15809615-15809069 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 84

Conread position: 69-589
Cow position: chr17:16869686-16870195 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 32

Conread position: 87-448
Cow position: chr17:12357475-12357858 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 122, 59

Conread position: 87-588
Cow position: chr17:7615088-7615604 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 68

Conread position: 116-589
Cow position: chr17:254668-254180 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 228

Conread position: 165-583
Cow position: chr17:20033911-20033524 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 281
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 52

Conread position: 192-409
Cow position: chr17:4920926-4920702 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 19

Conread position: 211-493
Cow position: chr17:25567663-25567378 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-575
Cow position: chr17:15334989-15335342 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 61

Conread position: 211-580
Cow position: chr17:14249643-14250016 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 80

Conread position: 211-580
Cow position: chr17:25739762-25739388 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chr17:2244607-2244984 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 113

Conread position: 211-589
Cow position: chr17:15854199-15853816 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 105

Conread position: 217-583
Cow position: chr17:1456920-1457291 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 63

Conread position: 221-491
Cow position: chr17:1883696-1883425 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 22

Conread position: 222-580
Cow position: chr17:4635336-4635683 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 18

Conread position: 232-472
Cow position: chr17:8008026-8007790 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 52

Conread position: 234-540
Cow position: chr17:36159597-36159902 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 62

Conread position: 234-589
Cow position: chr17:38829321-38828965 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 18

Conread position: 254-589
Cow position: chr17:29041482-29041817 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 41

Conread position: 257-589
Cow position: chr17:21771100-21770762 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 258-583
Cow position: chr17:17128423-17128093 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 73

Conread position: 283-581
Cow position: chr17:18324024-18324313 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 48

Conread position: 291-581
Cow position: chr17:31233060-31232768 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 213

Conread position: 299-521
Cow position: chr17:42313260-42313035 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 17

Conread position: 307-589
Cow position: chr17:2583756-2583474 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 32

Conread position: 329-589
Cow position: chr17:34000025-34000298 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 112

Conread position: 330-536
Cow position: chr17:8067899-8068108 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 18

Conread position: 330-588
Cow position: chr17:4085411-4085150 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 330-589
Cow position: chr17:13674144-13674400 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 332-584
Cow position: chr17:43145021-43145273 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 177

Conread position: 336-589
Cow position: chr17:1311421-1311680 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 158

Conread position: 337-589
Cow position: chr17:138943-138690 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 125

Conread position: 340-532
Cow position: chr17:39629645-39629846 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 14

Conread position: 340-589
Cow position: chr17:29950550-29950297 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 196

Conread position: 341-589
Cow position: chr17:21304626-21304370 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 345-581
Cow position: chr17:29897968-29897733 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 26

Conread position: 361-589
Cow position: chr17:16896545-16896783 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 18

Conread position: 381-587
Cow position: chr17:10270063-10270268 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 390-589
Cow position: chr17:44865027-44865227 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 176

Conread position: 392-581
Cow position: chr17:14871968-14871774 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 143

Conread position: 400-568
Cow position: chr17:11337892-11338061 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 49

Conread position: 3-568
Cow position: chr18:28929535-28930105 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 3-574
Cow position: chr18:54033605-54033029 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr18:33851448-33850845 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 152

Conread position: 3-589
Cow position: chr18:5536881-5536277 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr18:16094786-16094190 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 3-589
Cow position: chr18:17324283-17323685 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 138

Conread position: 3-589
Cow position: chr18:17334837-17335435 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 62

Conread position: 3-589
Cow position: chr18:22790504-22791118 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr18:23658996-23659589 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 3-589
Cow position: chr18:23802930-23802328 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr18:27990667-27990062 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr18:33407201-33406613 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr18:36512537-36511939 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 144

Conread position: 3-589
Cow position: chr18:36649285-36648710 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 169

Conread position: 3-589
Cow position: chr18:36770629-36771227 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 5-589
Cow position: chr18:11779228-11778644 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 9-512
Cow position: chr18:26306169-26305656 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-577
Cow position: chr18:36121954-36122544 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 9-580
Cow position: chr18:3190648-3190059 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr18:27540326-27539747 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-580
Cow position: chr18:40196015-40195427 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr18:45979261-45978697 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 72

Conread position: 9-581
Cow position: chr18:90027-89460 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 137

Conread position: 9-581
Cow position: chr18:42080116-42080705 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 9-587
Cow position: chr18:43463867-43464465 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 9-588
Cow position: chr18:17944421-17943818 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 351

Conread position: 9-589
Cow position: chr18:13270806-13270215 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr18:19356427-19355818 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 154

Conread position: 9-589
Cow position: chr18:19462184-19461585 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr18:29072320-29071726 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 136

Conread position: 9-589
Cow position: chr18:29079641-29079042 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 9-589
Cow position: chr18:30844003-30844599 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 64

Conread position: 9-589
Cow position: chr18:30876374-30876960 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 60

Conread position: 9-589
Cow position: chr18:31139653-31139057 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr18:33272503-33271942 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 34

Conread position: 9-589
Cow position: chr18:37733595-37732994 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 9-589
Cow position: chr18:40484900-40484305 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-589
Cow position: chr18:41238429-41237843 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 9-589
Cow position: chr18:43473490-43472903 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr18:47745643-47745058 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 43

Conread position: 9-589
Cow position: chr18:50092544-50093139 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-503
Cow position: chr18:51578604-51579117 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 337
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 65

Conread position: 11-429
Cow position: chr18:28530552-28530983 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 146

Conread position: 12-449
Cow position: chr18:27799978-27800430 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 12-580
Cow position: chr18:33608133-33607550 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 130

Conread position: 12-589
Cow position: chr18:42242439-42243038 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 13-589
Cow position: chr18:12270052-12269458 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 21

Conread position: 13-589
Cow position: chr18:14419877-14419282 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 13-589
Cow position: chr18:29797184-29797780 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 111

Conread position: 15-542
Cow position: chr18:39002250-39002771 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 18-532
Cow position: chr18:12249578-12249047 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 332
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 58

Conread position: 26-589
Cow position: chr18:30607583-30607001 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 29-589
Cow position: chr18:16471335-16471873 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 30-587
Cow position: chr18:26335278-26335850 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 33-431
Cow position: chr18:51679346-51679739 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 33-575
Cow position: chr18:20151475-20150929 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 150

Conread position: 38-564
Cow position: chr18:39494643-39494120 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 124

Conread position: 53-581
Cow position: chr18:6103561-6104087 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 93

Conread position: 88-580
Cow position: chr18:19310972-19310482 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 58

Conread position: 91-569
Cow position: chr18:52698443-52697957 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 320
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 55

Conread position: 99-456
Cow position: chr18:6425210-6425542 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 271, 14

Conread position: 149-581
Cow position: chr18:47985633-47985206 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 129

Conread position: 207-502
Cow position: chr18:36477478-36477174 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 74

Conread position: 207-589
Cow position: chr18:37692591-37692982 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 136

Conread position: 211-406
Cow position: chr18:28767562-28767371 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 119

Conread position: 211-459
Cow position: chr18:15324378-15324628 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 127

Conread position: 211-509
Cow position: chr18:15911806-15911504 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-568
Cow position: chr18:1022339-1022695 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 104

Conread position: 211-581
Cow position: chr18:15172520-15172165 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 112, 25

Conread position: 212-589
Cow position: chr18:44261744-44261373 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 215-542
Cow position: chr18:31996618-31996287 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 107

Conread position: 217-578
Cow position: chr18:35296818-35296468 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 153, 15

Conread position: 217-589
Cow position: chr18:36457949-36457563 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 133

Conread position: 218-576
Cow position: chr18:46869823-46869475 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 99

Conread position: 218-589
Cow position: chr18:11870169-11869792 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 218-589
Cow position: chr18:54463187-54462838 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 37

Conread position: 231-589
Cow position: chr18:23688841-23688477 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 98

Conread position: 232-589
Cow position: chr18:53872546-53872198 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 70

Conread position: 251-589
Cow position: chr18:16025005-16025353 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 288

Conread position: 259-476
Cow position: chr18:31563835-31564052 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 110, 68

Conread position: 306-583
Cow position: chr18:7930998-7931267 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 24

Conread position: 311-589
Cow position: chr18:28084635-28084352 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 11

Conread position: 313-588
Cow position: chr18:36776867-36776583 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 226

Conread position: 321-542
Cow position: chr18:37492372-37492145 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 330-580
Cow position: chr18:6866799-6866542 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 207

Conread position: 330-589
Cow position: chr18:32164359-32164626 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 336-532
Cow position: chr18:51610548-51610344 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 349-568
Cow position: chr18:48240883-48240676 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 20

Conread position: 355-589
Cow position: chr18:10890294-10890063 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 59

Conread position: 375-588
Cow position: chr18:6466010-6466226 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 175

Conread position: 447-589
Cow position: chr18:36233639-36233783 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 3-376
Cow position: chr19:12613943-12614320 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 204, 46

Conread position: 3-431
Cow position: chr19:2821156-2820731 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 3-438
Cow position: chr19:32457227-32456781 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 145

Conread position: 3-441
Cow position: chr19:29071139-29071574 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-491
Cow position: chr19:14581189-14580690 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 3-501
Cow position: chr19:15766692-15766168 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 157

Conread position: 3-508
Cow position: chr19:42274310-42274828 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 154

Conread position: 3-580
Cow position: chr19:5733407-5732816 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-581
Cow position: chr19:27612596-27613183 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 199

Conread position: 3-584
Cow position: chr19:12652791-12652192 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-588
Cow position: chr19:6556528-6555933 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 152

Conread position: 3-588
Cow position: chr19:7491997-7491407 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 145

Conread position: 3-589
Cow position: chr19:930735-930130 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr19:2260538-2261134 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 84

Conread position: 3-589
Cow position: chr19:2589100-2588500 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr19:15719998-15720562 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 3-589
Cow position: chr19:25086110-25085519 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr19:36352185-36351580 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr19:48534636-48534041 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 310

Conread position: 5-587
Cow position: chr19:7472964-7472373 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 120

Conread position: 9-477
Cow position: chr19:1169013-1169496 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-507
Cow position: chr19:19500783-19501297 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 137

Conread position: 9-507
Cow position: chr19:20433333-20433844 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-553
Cow position: chr19:14180091-14180652 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-557
Cow position: chr19:30237615-30237054 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-580
Cow position: chr19:208406-207821 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-581
Cow position: chr19:35982663-35982091 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 9-589
Cow position: chr19:42246-41644 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 329

Conread position: 9-589
Cow position: chr19:777426-776824 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr19:9704282-9704875 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 147

Conread position: 9-589
Cow position: chr19:23488664-23488070 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 39

Conread position: 9-589
Cow position: chr19:29367438-29366839 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr19:29624945-29624347 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr19:55163747-55164346 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 10-507
Cow position: chr19:12375472-12375976 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 10-589
Cow position: chr19:34985984-34985400 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 12-566
Cow position: chr19:26518429-26518996 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-580
Cow position: chr19:255218-255804 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 139

Conread position: 16-365
Cow position: chr19:44754005-44754357 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 48

Conread position: 27-589
Cow position: chr19:33877308-33876727 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 29-481
Cow position: chr19:3032449-3032918 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 38-580
Cow position: chr19:176356-175789 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 108

Conread position: 50-589
Cow position: chr19:3086657-3086104 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 58-589
Cow position: chr19:33945426-33944878 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 91

Conread position: 58-589
Cow position: chr19:44839339-44839858 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 59-417
Cow position: chr19:31762279-31762659 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 117, 87

Conread position: 72-480
Cow position: chr19:1267381-1267807 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 118-589
Cow position: chr19:35843644-35843165 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 27

Conread position: 152-427
Cow position: chr19:9542934-9543227 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 197

Conread position: 153-589
Cow position: chr19:17883703-17883276 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 308
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 132

Conread position: 154-581
Cow position: chr19:19173427-19172973 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 126

Conread position: 188-517
Cow position: chr19:3084964-3085285 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 35

Conread position: 204-472
Cow position: chr19:4360211-4359928 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 140

Conread position: 211-379
Cow position: chr19:33616757-33616586 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 211-512
Cow position: chr19:44216155-44216460 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 91, 127

Conread position: 211-518
Cow position: chr19:39077128-39076829 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 75

Conread position: 211-581
Cow position: chr19:20671908-20672275 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 63

Conread position: 211-584
Cow position: chr19:39697169-39696801 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 60

Conread position: 211-589
Cow position: chr19:5902723-5902338 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 114

Conread position: 211-589
Cow position: chr19:7078951-7078567 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr19:20612029-20611645 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 112

Conread position: 211-589
Cow position: chr19:32140692-32140308 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 44

Conread position: 211-589
Cow position: chr19:32952514-32952132 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 211-589
Cow position: chr19:35781572-35781187 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 127

Conread position: 211-589
Cow position: chr19:46821542-46821165 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 215-580
Cow position: chr19:743031-743386 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 38

Conread position: 217-589
Cow position: chr19:2269615-2269990 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 54

Conread position: 218-589
Cow position: chr19:31782258-31781882 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 221-580
Cow position: chr19:6784-6425 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 237-589
Cow position: chr19:33528516-33528158 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 241-583
Cow position: chr19:14528495-14528149 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 202

Conread position: 244-589
Cow position: chr19:2019103-2019452 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 173

Conread position: 245-512
Cow position: chr19:39726457-39726191 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 125, 57

Conread position: 246-589
Cow position: chr19:39394861-39394512 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 85

Conread position: 257-580
Cow position: chr19:405797-405469 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 67

Conread position: 262-589
Cow position: chr19:3221747-3221423 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 265-440
Cow position: chr19:42297856-42298032 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 73

Conread position: 306-467
Cow position: chr19:42725612-42725451 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 142

Conread position: 329-589
Cow position: chr19:42867042-42866776 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 8

Conread position: 330-491
Cow position: chr19:38811932-38811767 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 120

Conread position: 330-580
Cow position: chr19:1293927-1293671 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 205

Conread position: 330-582
Cow position: chr19:45464710-45464453 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 337-589
Cow position: chr19:1663637-1663383 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 340-522
Cow position: chr19:21337339-21337526 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 377-589
Cow position: chr19:48478091-48477880 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 133

Conread position: 381-581
Cow position: chr19:50020438-50020642 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 75, 124

Conread position: 396-589
Cow position: chr19:55378403-55378206 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 139

Conread position: 2-589
Cow position: chr2:41157530-41156934 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 3-440
Cow position: chr2:29383520-29383968 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 143

Conread position: 3-452
Cow position: chr2:59397463-59397923 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 35

Conread position: 3-474
Cow position: chr2:14853922-14853428 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 42

Conread position: 3-493
Cow position: chr2:9591536-9591040 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 143

Conread position: 3-493
Cow position: chr2:31125379-31124867 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 143

Conread position: 3-507
Cow position: chr2:31783540-31783025 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 99

Conread position: 3-522
Cow position: chr2:70498280-70498812 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-522
Cow position: chr2:71164123-71164637 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 45

Conread position: 3-533
Cow position: chr2:29233381-29232856 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 348
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 225, 39

Conread position: 3-559
Cow position: chr2:2688736-2688163 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 144

Conread position: 3-566
Cow position: chr2:12596298-12595729 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-568
Cow position: chr2:77281533-77280956 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 3-580
Cow position: chr2:9687965-9688536 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 167

Conread position: 3-580
Cow position: chr2:16752542-16753128 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 3-580
Cow position: chr2:70525116-70524521 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr2:84101312-84101905 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 177

Conread position: 3-581
Cow position: chr2:37120789-37120215 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-583
Cow position: chr2:78855144-78854577 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 3-587
Cow position: chr2:2590351-2590928 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 3-588
Cow position: chr2:13603710-13603117 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 53

Conread position: 3-588
Cow position: chr2:19212447-19213016 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 128

Conread position: 3-588
Cow position: chr2:25741913-25742515 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 3-589
Cow position: chr2:778097-778696 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 13

Conread position: 3-589
Cow position: chr2:944360-943783 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 3-589
Cow position: chr2:982373-981755 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr2:1186497-1187102 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 3-589
Cow position: chr2:2604018-2603421 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 3-589
Cow position: chr2:4017259-4017837 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 122

Conread position: 3-589
Cow position: chr2:10182878-10183473 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position: chr2:10262050-10262653 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr2:11686345-11685751 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 3-589
Cow position: chr2:12237671-12238256 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 3-589
Cow position: chr2:13006647-13006066 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr2:17940682-17941296 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 3-589
Cow position: chr2:19287966-19288559 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 3-589
Cow position: chr2:25885191-25885794 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-589
Cow position: chr2:28797206-28796601 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 45

Conread position: 3-589
Cow position: chr2:32417273-32417866 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 147

Conread position: 3-589
Cow position: chr2:36984011-36983407 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr2:41954354-41953769 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 279

Conread position: 3-589
Cow position: chr2:42502882-42502283 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 34

Conread position: 3-589
Cow position: chr2:50080924-50080319 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr2:63069931-63070534 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chr2:72963005-72963596 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 3-589
Cow position: chr2:77467858-77468440 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 54

Conread position: 3-589
Cow position: chr2:80839815-80840414 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 40

Conread position: 4-484
Cow position: chr2:28654151-28654643 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 140

Conread position: 4-569
Cow position: chr2:2018905-2018335 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 31

Conread position: 4-589
Cow position: chr2:68191012-68191594 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 5-589
Cow position: chr2:38659183-38659771 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 123

Conread position: 9-486
Cow position: chr2:16308974-16308486 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 9-506
Cow position: chr2:34467301-34467807 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 339

Conread position: 9-511
Cow position: chr2:85739720-85739196 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-512
Cow position: chr2:62225768-62225254 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 9-528
Cow position: chr2:16415484-16414931 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 345

Conread position: 9-560
Cow position: chr2:38335730-38335160 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-579
Cow position: chr2:62731878-62731290 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr2:4450696-4451285 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr2:19809950-19809361 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr2:72930738-72931320 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 89

Conread position: 9-581
Cow position: chr2:23493128-23492557 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr2:31499584-31498993 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 9-587
Cow position: chr2:28847926-28847329 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:208752-209351 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 9-589
Cow position: chr2:3623876-3623276 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:4179764-4180362 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr2:4916703-4917314 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 9-589
Cow position: chr2:5606744-5606157 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 9-589
Cow position: chr2:5797476-5798049 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 9-589
Cow position: chr2:6003470-6004081 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 86

Conread position: 9-589
Cow position: chr2:8530025-8529427 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:9715015-9714425 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:9911620-9911034 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:11726727-11726132 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:12220945-12221537 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr2:12286547-12285958 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 9-589
Cow position: chr2:16302263-16301676 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 9-589
Cow position: chr2:16326580-16327169 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:16331542-16330951 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 375

Conread position: 9-589
Cow position: chr2:17118725-17119323 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-589
Cow position: chr2:17265080-17265678 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr2:21169692-21169103 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 9-589
Cow position: chr2:26906595-26906002 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 9-589
Cow position: chr2:30380629-30380030 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:37396734-37396135 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr2:43879238-43878661 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 110

Conread position: 9-589
Cow position: chr2:44094718-44094122 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:46271889-46272466 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 6

Conread position: 9-589
Cow position: chr2:49475255-49474656 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:49480999-49481596 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 9-589
Cow position: chr2:49630677-49630081 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 138

Conread position: 9-589
Cow position: chr2:52622129-52621530 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:53557517-53556920 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-589
Cow position: chr2:56055095-56054504 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr2:57938749-57938150 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:64531644-64531045 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:67417416-67418012 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr2:68422906-68422308 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-589
Cow position: chr2:12331285-12330685 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 213

Conread position: 11-379
Cow position: chr2:66924604-66924225 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 196, 37

Conread position: 11-444
Cow position: chr2:17426771-17426325 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 11-449
Cow position: chr2:46350528-46350975 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 77

Conread position: 11-581
Cow position: chr2:43525484-43526088 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 12-433
Cow position: chr2:46309694-46309262 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 300
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 71

Conread position: 12-580
Cow position: chr2:16319785-16319202 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 12-581
Cow position: chr2:287582-288165 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 12-582
Cow position: chr2:31512370-31511792 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 88

Conread position: 12-589
Cow position: chr2:3669408-3668815 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 321

Conread position: 12-589
Cow position: chr2:10608445-10609033 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr2:20856243-20856839 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 155

Conread position: 12-589
Cow position: chr2:33398099-33398687 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 13-367
Cow position: chr2:53175724-53175356 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 13-581
Cow position: chr2:4930814-4931398 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 17-589
Cow position: chr2:22081246-22080659 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 120

Conread position: 24-503
Cow position: chr2:33390720-33390237 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 41

Conread position: 27-580
Cow position: chr2:9700859-9700289 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 27-589
Cow position: chr2:29219295-29218720 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 28-589
Cow position: chr2:40773254-40772669 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 45-502
Cow position: chr2:65023718-65023261 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 102

Conread position: 45-589
Cow position: chr2:47618897-47618335 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 101

Conread position: 48-517
Cow position: chr2:30187421-30187907 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 78, 12

Conread position: 48-589
Cow position: chr2:30909805-30909255 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 69

Conread position: 48-589
Cow position: chr2:46939692-46940229 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 64

Conread position: 58-589
Cow position: chr2:74468689-74469238 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 88

Conread position: 63-520
Cow position: chr2:63873437-63873918 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 306
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 37

Conread position: 68-488
Cow position: chr2:43878140-43877711 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 68-589
Cow position: chr2:11962338-11961795 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 79

Conread position: 69-459
Cow position: chr2:44986860-44987259 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 77

Conread position: 70-589
Cow position: chr2:41045575-41046108 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 76

Conread position: 83-589
Cow position: chr2:50407370-50406868 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 87-587
Cow position: chr2:15568818-15569329 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 58

Conread position: 88-437
Cow position: chr2:10728632-10728987 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 103

Conread position: 88-589
Cow position: chr2:6241602-6241069 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 61

Conread position: 91-497
Cow position: chr2:38259927-38260355 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 74

Conread position: 104-379
Cow position: chr2:36360836-36360549 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 51

Conread position: 116-589
Cow position: chr2:14556494-14556978 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 36

Conread position: 117-589
Cow position: chr2:1202649-1202168 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 29

Conread position: 178-589
Cow position: chr2:15059842-15060214 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 191, 24

Conread position: 203-581
Cow position: chr2:52170544-52170166 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 167, 99

Conread position: 207-581
Cow position: chr2:26080642-26080271 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 66

Conread position: 211-416
Cow position: chr2:77742997-77742799 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 78

Conread position: 211-507
Cow position: chr2:9219779-9220076 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 96, 51

Conread position: 211-580
Cow position: chr2:36058318-36058680 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 19

Conread position: 211-581
Cow position: chr2:26033099-26032730 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 69

Conread position: 211-583
Cow position: chr2:36136054-36135659 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 211-583
Cow position: chr2:45936607-45936967 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 77

Conread position: 211-589
Cow position: chr2:871110-871494 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 113

Conread position: 211-589
Cow position: chr2:5997967-5997584 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 132

Conread position: 211-589
Cow position: chr2:7506450-7506826 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 87

Conread position: 211-589
Cow position: chr2:10882574-10882190 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr2:38206884-38207268 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 129

Conread position: 211-589
Cow position: chr2:62735308-62734924 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 211-589
Cow position: chr2:72016954-72016570 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr2:73992853-73992480 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 211-589
Cow position: chr2:74762018-74761641 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 43

Conread position: 213-542
Cow position: chr2:72717004-72717336 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 43

Conread position: 216-581
Cow position: chr2:1657427-1657064 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 114

Conread position: 216-583
Cow position: chr2:54699655-54699289 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 86

Conread position: 216-584
Cow position: chr2:382989-383363 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 39

Conread position: 216-589
Cow position: chr2:76560726-76560344 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 217-513
Cow position: chr2:6966109-6965815 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 85, 54

Conread position: 217-516
Cow position: chr2:31418070-31417768 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 81

Conread position: 217-580
Cow position: chr2:36722176-36721814 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 217-589
Cow position: chr2:50812480-50812105 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 106

Conread position: 218-589
Cow position: chr2:2409713-2410086 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 121

Conread position: 218-589
Cow position: chr2:50565441-50565068 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 84

Conread position: 221-450
Cow position: chr2:74763729-74763957 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 50

Conread position: 221-581
Cow position: chr2:7906063-7905709 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 50

Conread position: 222-452
Cow position: chr2:32484007-32484241 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 8

Conread position: 227-588
Cow position: chr2:63067750-63068125 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 227-589
Cow position: chr2:49300893-49301266 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 283

Conread position: 231-589
Cow position: chr2:82894992-82895359 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 232-589
Cow position: chr2:68489216-68489573 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 58

Conread position: 235-589
Cow position: chr2:41184130-41183774 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 255-589
Cow position: chr2:12199629-12199997 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 139

Conread position: 260-589
Cow position: chr2:7370755-7370422 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 6

Conread position: 272-568
Cow position: chr2:67743971-67743669 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 29

Conread position: 276-589
Cow position: chr2:31409814-31410126 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 111

Conread position: 280-580
Cow position: chr2:39675686-39675981 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 57

Conread position: 284-589
Cow position: chr2:34502200-34501887 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 30

Conread position: 289-580
Cow position: chr2:17807507-17807793 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 51

Conread position: 290-581
Cow position: chr2:27075665-27075378 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 46

Conread position: 330-462
Cow position: chr2:21210751-21210613 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 330-512
Cow position: chr2:15058438-15058623 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 330-580
Cow position: chr2:21407493-21407238 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 88

Conread position: 330-580
Cow position: chr2:44189446-44189194 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 29

Conread position: 330-581
Cow position: chr2:20869883-20870132 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 330-589
Cow position: chr2:63059048-63058795 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 122

Conread position: 336-579
Cow position: chr2:86349303-86349054 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 337-589
Cow position: chr2:72692790-72692530 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 200

Conread position: 343-581
Cow position: chr2:34592544-34592777 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 9

Conread position: 345-580
Cow position: chr2:57054567-57054322 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 194

Conread position: 345-589
Cow position: chr2:15572062-15572306 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 175

Conread position: 345-589
Cow position: chr2:20879303-20879532 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 24, 29

Conread position: 347-589
Cow position: chr2:20978040-20977794 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 167

Conread position: 359-589
Cow position: chr2:20350988-20351204 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 95, 36

Conread position: 361-589
Cow position: chr2:62502032-62502266 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 11

Conread position: 371-589
Cow position: chr2:39119581-39119357 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 164

Conread position: 372-589
Cow position: chr2:53175302-53175078 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 381-589
Cow position: chr2:1693877-1693663 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 70, 154

Conread position: 383-589
Cow position: chr2:62050985-62051196 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 30

Conread position: 391-581
Cow position: chr2:69648131-69648330 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 115

Conread position: 395-589
Cow position: chr2:48360902-48360702 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 31

Conread position: 400-579
Cow position: chr2:33402953-33403131 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 102

Conread position: 403-589
Cow position: chr2:58564809-58565003 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 425-589
Cow position: chr2:56265875-56265709 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 140

Conread position: 447-589
Cow position: chr2:39424826-39424683 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 83

Conread position: 447-589
Cow position: chr2:46303057-46303198 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 134, 37

Conread position: 447-589
Cow position: chr2:63000823-63000680 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 83

Conread position: 2-580
Cow position: chr20:22221729-22222321 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 2-589
Cow position: chr20:13653467-13654060 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 78

Conread position: 3-403
Cow position: chr20:19340435-19340843 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 3-404
Cow position: chr20:34776770-34776359 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 222

Conread position: 3-426
Cow position: chr20:20353276-20353697 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-436
Cow position: chr20:6423607-6423182 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 27

Conread position: 3-503
Cow position: chr20:14760076-14760591 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-503
Cow position: chr20:32939159-32938654 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 3-508
Cow position: chr20:40781615-40781094 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 3-522
Cow position: chr20:31261377-31260850 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 145

Conread position: 3-581
Cow position: chr20:6054844-6055441 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 3-581
Cow position: chr20:30689750-30689157 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 3-581
Cow position: chr20:31845943-31846545 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 144

Conread position: 3-587
Cow position: chr20:18490825-18490225 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 3-587
Cow position: chr20:28956064-28956675 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 3-588
Cow position: chr20:41110559-41111143 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 24

Conread position: 3-589
Cow position: chr20:9006954-9007543 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 34

Conread position: 3-589
Cow position: chr20:13766761-13766166 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr20:15089495-15090098 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 3-589
Cow position: chr20:15295900-15295294 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 3-589
Cow position: chr20:22209500-22208895 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr20:23465777-23466375 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position: chr20:23803029-23802424 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr20:24398988-24399591 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 3-589
Cow position: chr20:27877361-27876760 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr20:30384367-30384971 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-589
Cow position: chr20:32084579-32085180 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 3-589
Cow position: chr20:34968879-34968256 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr20:35843555-35844159 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 4-583
Cow position: chr20:37272141-37271551 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 26

Conread position: 4-584
Cow position: chr20:34597486-34598077 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 83

Conread position: 9-438
Cow position: chr20:27339695-27339271 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 9-444
Cow position: chr20:12552701-12553133 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 34

Conread position: 9-466
Cow position: chr20:24523070-24522586 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 326
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 163

Conread position: 9-507
Cow position: chr20:31564351-31564855 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 9-517
Cow position: chr20:13574689-13575198 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 154

Conread position: 9-564
Cow position: chr20:14837058-14836487 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr20:5958272-5958861 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 9-580
Cow position: chr20:16516196-16515607 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-580
Cow position: chr20:21398673-21398103 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 9-581
Cow position: chr20:9707263-9707848 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 87

Conread position: 9-581
Cow position: chr20:14866517-14867108 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 9-581
Cow position: chr20:28113852-28113265 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 9-589
Cow position: chr20:754314-753715 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr20:8970036-8970619 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 139

Conread position: 9-589
Cow position: chr20:9411218-9410638 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr20:13505709-13506289 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr20:14326746-14327340 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 9-589
Cow position: chr20:19155291-19155888 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-589
Cow position: chr20:21720409-21719831 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr20:29370546-29371147 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 11-580
Cow position: chr20:28295189-28294605 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 12-558
Cow position: chr20:11453731-11454297 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr20:15068711-15068088 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 12-589
Cow position: chr20:28443482-28444073 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 13-512
Cow position: chr20:6477365-6476859 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 13-565
Cow position: chr20:19146496-19145931 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 13-565
Cow position: chr20:23107272-23106704 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 13-589
Cow position: chr20:9536765-9536176 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 13-589
Cow position: chr20:34458405-34458999 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr20:37154098-37154692 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 18-432
Cow position: chr20:19313700-19314117 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 21-589
Cow position: chr20:25658169-25658750 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 134

Conread position: 26-580
Cow position: chr20:9339871-9339298 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 27-578
Cow position: chr20:20732097-20731544 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 30-488
Cow position: chr20:16584850-16584377 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 35-587
Cow position: chr20:3469220-3468657 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 124

Conread position: 45-511
Cow position: chr20:7225991-7225522 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 45-581
Cow position: chr20:11635175-11635720 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 355
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 119, 60

Conread position: 50-580
Cow position: chr20:28725589-28725045 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 96

Conread position: 67-581
Cow position: chr20:7597054-7597574 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 20

Conread position: 68-588
Cow position: chr20:18321763-18322282 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 69-589
Cow position: chr20:14877867-14877334 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 80-566
Cow position: chr20:5576057-5575584 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 58

Conread position: 90-584
Cow position: chr20:12695101-12694586 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 57

Conread position: 102-589
Cow position: chr20:26076325-26075831 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 44

Conread position: 108-578
Cow position: chr20:17668516-17668027 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 190

Conread position: 116-589
Cow position: chr20:30147196-30146709 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 30

Conread position: 117-532
Cow position: chr20:31221035-31220616 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 32

Conread position: 117-581
Cow position: chr20:38654112-38654579 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 32

Conread position: 207-589
Cow position: chr20:3782038-3782430 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 211-431
Cow position: chr20:28282723-28282515 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 158, 99

Conread position: 211-436
Cow position: chr20:10538293-10538068 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 21

Conread position: 211-456
Cow position: chr20:19667232-19666986 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 128

Conread position: 211-560
Cow position: chr20:16526956-16526601 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 211-580
Cow position: chr20:15780552-15780916 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 159, 60

Conread position: 211-581
Cow position: chr20:13955289-13954907 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 100

Conread position: 211-587
Cow position: chr20:20935485-20935855 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 58

Conread position: 211-589
Cow position: chr20:6097022-6097390 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 79

Conread position: 211-589
Cow position: chr20:10035093-10035465 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 58

Conread position: 211-589
Cow position: chr20:13501306-13500938 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 117

Conread position: 211-589
Cow position: chr20:14512349-14511969 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 211-589
Cow position: chr20:19364238-19364611 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 54

Conread position: 216-364
Cow position: chr20:13877340-13877491 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 216-589
Cow position: chr20:7512288-7512666 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 115

Conread position: 217-453
Cow position: chr20:14094202-14093965 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 82, 114

Conread position: 217-589
Cow position: chr20:24903894-24904270 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 218-589
Cow position: chr20:20439318-20439695 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 122

Conread position: 218-589
Cow position: chr20:30431930-30431545 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 221-529
Cow position: chr20:29843939-29843643 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 224-589
Cow position: chr20:28888007-28887646 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 59

Conread position: 231-448
Cow position: chr20:40755803-40755588 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 40

Conread position: 234-589
Cow position: chr20:9997171-9996808 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 235-407
Cow position: chr20:2802445-2802609 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 85

Conread position: 241-512
Cow position: chr20:19668973-19669247 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 13

Conread position: 243-474
Cow position: chr20:4895736-4895967 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 64, 97

Conread position: 252-580
Cow position: chr20:14756640-14756982 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 28

Conread position: 274-541
Cow position: chr20:10494786-10494515 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 28

Conread position: 295-589
Cow position: chr20:27000068-26999770 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 308-584
Cow position: chr20:32352155-32351880 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 5

Conread position: 310-580
Cow position: chr20:6239585-6239851 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 52

Conread position: 314-584
Cow position: chr20:19352524-19352789 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 25

Conread position: 332-581
Cow position: chr20:27993988-27994239 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 5

Conread position: 333-589
Cow position: chr20:8349571-8349826 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 45

Conread position: 336-567
Cow position: chr20:21338580-21338805 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 101, 47

Conread position: 336-589
Cow position: chr20:7568439-7568690 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 33, 92

Conread position: 337-588
Cow position: chr20:32164573-32164829 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 43

Conread position: 340-589
Cow position: chr20:12048009-12047767 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 151

Conread position: 348-589
Cow position: chr20:16106970-16106722 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 183

Conread position: 355-589
Cow position: chr20:19017897-19018130 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 140

Conread position: 356-578
Cow position: chr20:8890820-8890594 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 213

Conread position: 357-580
Cow position: chr20:33246800-33247021 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 22

Conread position: 443-589
Cow position: chr20:22064657-22064804 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 452-580
Cow position: chr20:7810430-7810558 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 78

Conread position: 456-589
Cow position: chr20:39234639-39234505 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 74

Conread position: 3-414
Cow position: chr21:29214496-29214919 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 3-516
Cow position: chr21:18979196-18979707 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-570
Cow position: chr21:17479044-17478476 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 76

Conread position: 3-579
Cow position: chr21:7156363-7155781 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 3-580
Cow position: chr21:2767845-2768449 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 3-580
Cow position: chr21:5021127-5020540 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 3-581
Cow position: chr21:2904804-2905399 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-581
Cow position: chr21:4585689-4586286 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-581
Cow position: chr21:6623808-6623204 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-581
Cow position: chr21:34254620-34255185 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 3-582
Cow position: chr21:18932152-18931569 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 18

Conread position: 3-585
Cow position: chr21:19965582-19964997 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 372
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 184, 79

Conread position: 3-589
Cow position: chr21:81729-81131 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 3-589
Cow position: chr21:150135-149531 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr21:1196526-1195922 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr21:2293202-2293798 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 3-589
Cow position: chr21:3782759-3782157 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-589
Cow position: chr21:10571259-10570671 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 147

Conread position: 3-589
Cow position: chr21:10854245-10853649 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr21:12802123-12802724 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 154

Conread position: 3-589
Cow position: chr21:15545703-15546304 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 3-589
Cow position: chr21:16278369-16277786 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 35

Conread position: 3-589
Cow position: chr21:18285788-18285190 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 66

Conread position: 3-589
Cow position: chr21:22719115-22719713 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 103

Conread position: 3-589
Cow position: chr21:22855881-22855297 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr21:31252986-31252371 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr21:31512282-31512886 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr21:33257546-33256940 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 3-589
Cow position: chr21:37299123-37298524 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 3-589
Cow position: chr21:47532697-47532118 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 158

Conread position: 4-580
Cow position: chr21:1058457-1057856 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 84

Conread position: 4-581
Cow position: chr21:48262788-48262209 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 5-420
Cow position: chr21:28839952-28839529 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 39

Conread position: 5-580
Cow position: chr21:13303187-13302603 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 9-416
Cow position: chr21:37517712-37518132 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 137

Conread position: 9-475
Cow position: chr21:39486291-39486774 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-491
Cow position: chr21:35742498-35742983 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 155

Conread position: 9-512
Cow position: chr21:21216488-21217012 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 495

Conread position: 9-560
Cow position: chr21:26628750-26628182 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-575
Cow position: chr21:24297107-24297664 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 387
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 150

Conread position: 9-580
Cow position: chr21:4189493-4188930 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 94

Conread position: 9-580
Cow position: chr21:5641855-5642445 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 332

Conread position: 9-580
Cow position: chr21:20243639-20244206 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 139

Conread position: 9-580
Cow position: chr21:36892249-36892838 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 9-588
Cow position: chr21:31950396-31949801 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr21:2514827-2514235 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 324

Conread position: 9-589
Cow position: chr21:4897997-4898580 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 34

Conread position: 9-589
Cow position: chr21:9209289-9208697 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 9-589
Cow position: chr21:11509919-11509325 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 68

Conread position: 9-589
Cow position: chr21:23329359-23329959 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr21:25291655-25291064 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 9-589
Cow position: chr21:27147571-27148168 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 59

Conread position: 9-589
Cow position: chr21:28477278-28476686 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 138

Conread position: 9-589
Cow position: chr21:29424041-29423447 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr21:30965959-30966559 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 148

Conread position: 9-589
Cow position: chr21:42917776-42917177 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr21:44861608-44862207 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 9-589
Cow position: chr21:47429323-47428727 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-581
Cow position: chr21:21000404-21000991 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 263

Conread position: 10-589
Cow position: chr21:23801460-23802047 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 11-370
Cow position: chr21:19050842-19051206 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 15

Conread position: 11-579
Cow position: chr21:39081382-39081964 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 369
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 134

Conread position: 12-446
Cow position: chr21:4594988-4595433 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 290
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 20

Conread position: 12-579
Cow position: chr21:471273-470690 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 237

Conread position: 12-580
Cow position: chr21:2503724-2503137 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 272

Conread position: 12-587
Cow position: chr21:47978247-47977653 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr21:33316385-33316982 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 13-410
Cow position: chr21:42542756-42543147 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 13-464
Cow position: chr21:6619398-6619845 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 74

Conread position: 13-578
Cow position: chr21:3765788-3766374 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-584
Cow position: chr21:45694-45093 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 122

Conread position: 13-589
Cow position: chr21:19350883-19351477 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 133

Conread position: 13-589
Cow position: chr21:32396072-32396640 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-589
Cow position: chr21:18818684-18819252 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 92

Conread position: 15-589
Cow position: chr21:21027436-21026858 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 260

Conread position: 15-589
Cow position: chr21:33964765-33965335 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 77

Conread position: 16-580
Cow position: chr21:4559097-4559676 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 209

Conread position: 17-588
Cow position: chr21:27376095-27375491 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 21-579
Cow position: chr21:29500503-29499933 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 22-589
Cow position: chr21:3253599-3253007 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 135

Conread position: 29-507
Cow position: chr21:49470576-49470100 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 315
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 191, 94

Conread position: 29-587
Cow position: chr21:27124758-27125332 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 127

Conread position: 38-513
Cow position: chr21:38900408-38899915 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 308

Conread position: 39-490
Cow position: chr21:743757-744211 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 46-589
Cow position: chr21:4567886-4567336 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 70

Conread position: 54-487
Cow position: chr21:28872739-28872298 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 289
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 10

Conread position: 56-589
Cow position: chr21:28915042-28915591 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 59-589
Cow position: chr21:36505910-36506454 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 87

Conread position: 60-589
Cow position: chr21:30627157-30627695 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 86

Conread position: 63-584
Cow position: chr21:28908216-28908751 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 37

Conread position: 70-517
Cow position: chr21:46337969-46337517 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 300
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 130, 99

Conread position: 71-588
Cow position: chr21:25157202-25156684 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 62

Conread position: 77-589
Cow position: chr21:36376894-36376374 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 87-432
Cow position: chr21:10668439-10668779 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 59

Conread position: 105-589
Cow position: chr21:46830681-46831182 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 18

Conread position: 109-416
Cow position: chr21:37873789-37874104 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 56

Conread position: 118-589
Cow position: chr21:2420066-2419581 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 123-410
Cow position: chr21:11760104-11760396 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 23

Conread position: 162-589
Cow position: chr21:46973930-46974346 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 180-580
Cow position: chr21:27342614-27343004 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 31

Conread position: 203-589
Cow position: chr21:4722423-4722040 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 204-411
Cow position: chr21:34734615-34734407 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 128

Conread position: 204-588
Cow position: chr21:18836884-18837261 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 69

Conread position: 207-580
Cow position: chr21:13300582-13300222 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 78

Conread position: 207-584
Cow position: chr21:5630256-5630630 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 242
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 125

Conread position: 211-379
Cow position: chr21:28428816-28428648 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 21

Conread position: 211-493
Cow position: chr21:29213616-29213344 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 159, 61

Conread position: 211-580
Cow position: chr21:49655417-49655789 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 41

Conread position: 211-581
Cow position: chr21:48234552-48234922 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 37

Conread position: 211-583
Cow position: chr21:48196208-48195844 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 26

Conread position: 211-587
Cow position: chr21:22463957-22463577 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 211-589
Cow position: chr21:33983505-33983891 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 216-569
Cow position: chr21:2928112-2928469 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 105

Conread position: 216-589
Cow position: chr21:31276100-31275728 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 24

Conread position: 217-589
Cow position: chr21:9896103-9895746 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 63

Conread position: 217-589
Cow position: chr21:32534574-32534213 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 83

Conread position: 218-589
Cow position: chr21:6965712-6966088 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 35

Conread position: 221-580
Cow position: chr21:17721336-17720975 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 109

Conread position: 221-581
Cow position: chr21:648919-649286 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 301

Conread position: 221-582
Cow position: chr21:19967607-19967243 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 94, 103

Conread position: 224-520
Cow position: chr21:4282654-4282960 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 119

Conread position: 227-466
Cow position: chr21:31642933-31642695 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 53

Conread position: 227-475
Cow position: chr21:8890642-8890380 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 227-582
Cow position: chr21:22316267-22315921 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 18

Conread position: 231-589
Cow position: chr21:3047072-3046722 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 14

Conread position: 232-589
Cow position: chr21:25190402-25190035 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 101

Conread position: 232-589
Cow position: chr21:44219424-44219063 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 96

Conread position: 236-589
Cow position: chr21:26479786-26480137 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 87

Conread position: 238-589
Cow position: chr21:37147037-37147400 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 76

Conread position: 240-506
Cow position: chr21:20577665-20577937 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 29

Conread position: 245-589
Cow position: chr21:17144422-17144072 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 252-587
Cow position: chr21:47360447-47360783 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 51

Conread position: 259-472
Cow position: chr21:28442171-28441945 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 265-589
Cow position: chr21:26698965-26699282 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 122

Conread position: 265-589
Cow position: chr21:39400958-39400620 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 266-577
Cow position: chr21:18829169-18829481 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 32, 40

Conread position: 295-589
Cow position: chr21:37323117-37323416 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 275

Conread position: 305-468
Cow position: chr21:13163082-13162918 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 7

Conread position: 310-581
Cow position: chr21:27263353-27263080 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 205

Conread position: 314-589
Cow position: chr21:34657655-34657378 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 330-580
Cow position: chr21:18791785-18792045 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 47

Conread position: 335-589
Cow position: chr21:18846690-18846950 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 45

Conread position: 340-589
Cow position: chr21:14534253-14533997 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 196

Conread position: 359-536
Cow position: chr21:36711222-36711040 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 129

Conread position: 359-542
Cow position: chr21:580798-580985 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 19

Conread position: 361-589
Cow position: chr21:28616874-28616650 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 142

Conread position: 371-589
Cow position: chr21:38027227-38027002 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 163

Conread position: 387-589
Cow position: chr21:14727276-14727071 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 146

Conread position: 390-584
Cow position: chr21:33420387-33420580 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 104

Conread position: 392-589
Cow position: chr21:39428989-39428786 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 143

Conread position: 413-588
Cow position: chr21:25472761-25472587 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 11

Conread position: 452-589
Cow position: chr21:15398653-15398517 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 15

Conread position: 2-506
Cow position: chr22:42976536-42976036 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 98

Conread position: 2-532
Cow position: chr22:38247162-38247691 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 357
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 89, 62

Conread position: 3-388
Cow position: chr22:13187074-13186701 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 65

Conread position: 3-410
Cow position: chr22:11922259-11922656 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 96

Conread position: 3-417
Cow position: chr22:22160309-22159903 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-421
Cow position: chr22:5041920-5041485 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 66

Conread position: 3-443
Cow position: chr22:556520-556964 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 23

Conread position: 3-486
Cow position: chr22:1326013-1325524 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 20

Conread position: 3-569
Cow position: chr22:8418064-8417483 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 3-569
Cow position: chr22:13720941-13721499 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 148

Conread position: 3-569
Cow position: chr22:29553358-29553951 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-569
Cow position: chr22:45106319-45106892 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-577
Cow position: chr22:18233683-18233098 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 277

Conread position: 3-580
Cow position: chr22:11837610-11838198 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 3-580
Cow position: chr22:12727853-12728440 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 111

Conread position: 3-580
Cow position: chr22:22048385-22048979 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr22:34605983-34605405 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 100

Conread position: 3-581
Cow position: chr22:12624741-12625339 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-581
Cow position: chr22:43261676-43261085 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 86

Conread position: 3-584
Cow position: chr22:1027814-1027235 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 268

Conread position: 3-587
Cow position: chr22:26166982-26167575 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 3-589
Cow position: chr22:10161558-10160939 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 172

Conread position: 3-589
Cow position: chr22:13017189-13017789 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 268

Conread position: 3-589
Cow position: chr22:14816827-14817429 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 3-589
Cow position: chr22:15308146-15308752 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr22:17324687-17325291 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr22:30514847-30514253 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 3-589
Cow position: chr22:31316355-31315754 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-589
Cow position: chr22:32210417-32209822 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 3-589
Cow position: chr22:36208517-36207917 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 163

Conread position: 4-561
Cow position: chr22:864917-865487 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 4-580
Cow position: chr22:33094151-33093559 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 4-589
Cow position: chr22:14005748-14005158 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 33

Conread position: 4-589
Cow position: chr22:32894721-32894119 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 4-589
Cow position: chr22:38439561-38440157 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 143

Conread position: 9-438
Cow position: chr22:6929036-6928598 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 9-450
Cow position: chr22:22022472-22022020 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 137

Conread position: 9-566
Cow position: chr22:11127896-11127326 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr22:5015889-5015308 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-580
Cow position: chr22:21192404-21192981 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr22:35909676-35910267 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 88

Conread position: 9-580
Cow position: chr22:39472790-39473391 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 36

Conread position: 9-589
Cow position: chr22:540945-540345 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr22:3274549-3275146 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 331

Conread position: 9-589
Cow position: chr22:6924830-6924253 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 134

Conread position: 9-589
Cow position: chr22:10550685-10550077 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 351

Conread position: 9-589
Cow position: chr22:10906396-10906994 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 142

Conread position: 9-589
Cow position: chr22:13553163-13552567 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 324

Conread position: 9-589
Cow position: chr22:14509716-14510306 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 9-589
Cow position: chr22:20236764-20237363 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr22:22607968-22607369 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr22:25336962-25336362 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr22:29855657-29855060 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 91

Conread position: 9-589
Cow position: chr22:30674927-30675516 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr22:32944258-32943659 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr22:41271399-41271991 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 306

Conread position: 9-589
Cow position: chr22:44099258-44099857 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr22:44365400-44365999 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-582
Cow position: chr22:13249643-13249039 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 577

Conread position: 11-536
Cow position: chr22:33798213-33798739 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 11-542
Cow position: chr22:16104105-16103561 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 48

Conread position: 11-589
Cow position: chr22:44463115-44462509 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 146

Conread position: 12-441
Cow position: chr22:13769075-13768642 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 12-477
Cow position: chr22:1484445-1483967 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 112

Conread position: 12-581
Cow position: chr22:36571748-36572320 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 86

Conread position: 12-587
Cow position: chr22:22107848-22107256 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 12-587
Cow position: chr22:30963693-30963114 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 92

Conread position: 12-589
Cow position: chr22:982129-981533 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 12-589
Cow position: chr22:10361717-10361136 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 31

Conread position: 12-589
Cow position: chr22:14808061-14807465 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr22:15012885-15013478 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 136

Conread position: 12-589
Cow position: chr22:29397887-29397295 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr22:36555344-36555937 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 52

Conread position: 13-443
Cow position: chr22:26658585-26658131 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 310
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 137

Conread position: 13-589
Cow position: chr22:28785916-28785330 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 133

Conread position: 13-589
Cow position: chr22:39903187-39902592 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 18-581
Cow position: chr22:26339092-26338542 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 83

Conread position: 27-437
Cow position: chr22:9277581-9277167 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 236

Conread position: 28-431
Cow position: chr22:27513958-27513550 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 128

Conread position: 28-581
Cow position: chr22:44924553-44925106 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 128

Conread position: 33-551
Cow position: chr22:11746337-11746862 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 61

Conread position: 50-579
Cow position: chr22:36188806-36188274 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 251

Conread position: 50-580
Cow position: chr22:23864576-23864035 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 96

Conread position: 50-589
Cow position: chr22:34608234-34607700 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 54

Conread position: 53-589
Cow position: chr22:11987956-11988495 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 56-589
Cow position: chr22:3433201-3433752 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 90

Conread position: 58-589
Cow position: chr22:697692-697143 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 88

Conread position: 59-554
Cow position: chr22:44515190-44515687 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 96

Conread position: 68-575
Cow position: chr22:35754946-35755466 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 88

Conread position: 69-589
Cow position: chr22:31645842-31645323 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 77

Conread position: 76-577
Cow position: chr22:20088104-20087592 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 76-589
Cow position: chr22:45845632-45845110 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 70

Conread position: 80-491
Cow position: chr22:5331050-5331468 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 84-589
Cow position: chr22:32221168-32220671 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 61

Conread position: 104-580
Cow position: chr22:15858496-15857998 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 159

Conread position: 120-589
Cow position: chr22:10330836-10330371 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 67, 26

Conread position: 124-572
Cow position: chr22:8876726-8876269 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 31

Conread position: 165-506
Cow position: chr22:18188833-18188488 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 174

Conread position: 165-583
Cow position: chr22:41971918-41972323 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 40

Conread position: 207-502
Cow position: chr22:11767240-11767531 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 136

Conread position: 207-580
Cow position: chr22:15057875-15057499 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 294

Conread position: 207-589
Cow position: chr22:36503108-36503490 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 137

Conread position: 207-589
Cow position: chr22:46578110-46578493 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 208-589
Cow position: chr22:15920247-15920619 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 69

Conread position: 211-414
Cow position: chr22:34625712-34625510 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 47

Conread position: 211-568
Cow position: chr22:46525150-46524805 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 157, 77

Conread position: 211-580
Cow position: chr22:8340003-8339638 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 106

Conread position: 211-581
Cow position: chr22:30092384-30092023 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 73

Conread position: 211-588
Cow position: chr22:32951825-32951452 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 211-589
Cow position: chr22:12868854-12869245 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 17

Conread position: 211-589
Cow position: chr22:13776101-13775710 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 112, 189

Conread position: 211-589
Cow position: chr22:15953415-15953789 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 75

Conread position: 211-589
Cow position: chr22:19048186-19048560 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 211-589
Cow position: chr22:29012757-29012374 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 69

Conread position: 212-580
Cow position: chr22:1517447-1517821 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 128

Conread position: 212-588
Cow position: chr22:37323857-37323481 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 60

Conread position: 217-441
Cow position: chr22:31212951-31212731 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 123

Conread position: 217-582
Cow position: chr22:7156229-7155875 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 85

Conread position: 217-587
Cow position: chr22:10314213-10313840 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 114

Conread position: 217-589
Cow position: chr22:18122190-18122567 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 85

Conread position: 221-578
Cow position: chr22:15942147-15942504 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 150, 81

Conread position: 221-588
Cow position: chr22:8881721-8881358 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 107

Conread position: 224-589
Cow position: chr22:34931497-34931868 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 138

Conread position: 227-437
Cow position: chr22:34894128-34893918 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 75, 113

Conread position: 231-589
Cow position: chr22:9728421-9728762 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 71

Conread position: 233-587
Cow position: chr22:47957704-47958052 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 6

Conread position: 239-586
Cow position: chr22:15174507-15174858 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 245-589
Cow position: chr22:24817204-24817552 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 57

Conread position: 252-584
Cow position: chr22:52064-51728 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 88

Conread position: 255-580
Cow position: chr22:25340698-25340374 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 257-533
Cow position: chr22:33113683-33113404 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 42, 23

Conread position: 257-580
Cow position: chr22:28714448-28714120 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 263-562
Cow position: chr22:37032336-37032636 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 9

Conread position: 263-589
Cow position: chr22:533634-533312 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 33

Conread position: 266-589
Cow position: chr22:43045176-43045503 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 73

Conread position: 281-580
Cow position: chr22:41946192-41946495 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 63

Conread position: 296-589
Cow position: chr22:43789234-43788939 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 91, 41

Conread position: 314-568
Cow position: chr22:36564768-36565013 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 150, 74

Conread position: 316-580
Cow position: chr22:5836035-5835771 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 23

Conread position: 319-557
Cow position: chr22:21935379-21935626 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 148

Conread position: 319-580
Cow position: chr22:40386123-40385860 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 93

Conread position: 319-589
Cow position: chr22:21364096-21364375 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 17

Conread position: 330-589
Cow position: chr22:699419-699156 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 58

Conread position: 331-581
Cow position: chr22:27223364-27223617 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 106

Conread position: 333-584
Cow position: chr22:32660749-32660497 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 192

Conread position: 336-580
Cow position: chr22:9371828-9371579 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 34, 170

Conread position: 340-588
Cow position: chr22:28043786-28043526 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 94

Conread position: 346-568
Cow position: chr22:11779312-11779538 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 32

Conread position: 349-543
Cow position: chr22:11036932-11036733 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 360-589
Cow position: chr22:12968959-12969193 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 208

Conread position: 371-589
Cow position: chr22:34758626-34758851 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 158

Conread position: 386-589
Cow position: chr22:36584214-36584418 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 85

Conread position: 387-589
Cow position: chr22:33387357-33387556 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 40

Conread position: 391-569
Cow position: chr22:4645012-4644829 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 408-589
Cow position: chr22:36543083-36543259 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 447-580
Cow position: chr22:18195050-18194917 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 103

Conread position: 447-589
Cow position: chr22:11698254-11698397 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 447-589
Cow position: chr22:43236191-43236048 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 83

Conread position: 448-589
Cow position: chr22:8480570-8480429 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 123

Conread position: 448-589
Cow position: chr22:8504815-8504674 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 123

Conread position: 3-411
Cow position: chr23:7374479-7374062 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 3-449
Cow position: chr23:29271695-29271246 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 18

Conread position: 3-455
Cow position: chr23:10014143-10013678 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 152

Conread position: 3-506
Cow position: chr23:29471505-29472021 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 3-536
Cow position: chr23:11404877-11405425 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-577
Cow position: chr23:11079083-11078498 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 77

Conread position: 3-580
Cow position: chr23:4892506-4891910 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr23:15215045-15215620 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 3-580
Cow position: chr23:30622691-30623286 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-581
Cow position: chr23:6593119-6593711 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-581
Cow position: chr23:7360263-7359671 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 3-584
Cow position: chr23:2180055-2180637 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 3-587
Cow position: chr23:11080194-11079590 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr23:1321592-1322190 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 3-589
Cow position: chr23:3167840-3167246 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 3-589
Cow position: chr23:5623771-5624368 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr23:11344301-11343701 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position: chr23:19493662-19493053 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chr23:20025750-20025138 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 3-589
Cow position: chr23:24098935-24098332 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr23:26829052-26828457 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr23:36309014-36308417 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 144

Conread position: 4-568
Cow position: chr23:17000242-16999666 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 4-589
Cow position: chr23:15180764-15180163 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 143

Conread position: 4-589
Cow position: chr23:17404406-17403818 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 64

Conread position: 5-589
Cow position: chr23:30633785-30634390 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 9-368
Cow position: chr23:10554420-10554794 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-502
Cow position: chr23:26230917-26230422 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 9-522
Cow position: chr23:15020717-15020189 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-531
Cow position: chr23:38560412-38560947 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 9-580
Cow position: chr23:1398443-1399000 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 36

Conread position: 9-580
Cow position: chr23:40825585-40825015 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 9-584
Cow position: chr23:2369584-2369025 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 9-589
Cow position: chr23:671973-671376 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:1959930-1959331 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 9-589
Cow position: chr23:3286548-3285963 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 96

Conread position: 9-589
Cow position: chr23:3302658-3302059 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:5441720-5441122 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:11070867-11070281 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:11782589-11781990 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:14215431-14216022 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:21351152-21351745 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr23:21772105-21772705 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-502
Cow position: chr23:23470516-23470009 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 12-482
Cow position: chr23:14738705-14738219 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 26

Conread position: 12-581
Cow position: chr23:30210917-30211449 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 12-589
Cow position: chr23:1337702-1338286 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 12-589
Cow position: chr23:8708192-8707595 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 13-589
Cow position: chr23:41015728-41015133 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 27-589
Cow position: chr23:4531917-4532493 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 29-589
Cow position: chr23:11128792-11128224 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 35-589
Cow position: chr23:8291226-8290665 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 60-441
Cow position: chr23:26840922-26840527 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 68-589
Cow position: chr23:15529328-15528791 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 78

Conread position: 69-587
Cow position: chr23:25358075-25357553 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 103

Conread position: 69-589
Cow position: chr23:4437362-4436823 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 86

Conread position: 69-589
Cow position: chr23:5870666-5871192 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 86

Conread position: 93-581
Cow position: chr23:19637204-19637681 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 47

Conread position: 120-376
Cow position: chr23:36748252-36748505 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 11, 27

Conread position: 154-581
Cow position: chr23:25670116-25670567 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 186

Conread position: 172-493
Cow position: chr23:39108186-39108518 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 207-526
Cow position: chr23:344876-345200 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 134

Conread position: 216-456
Cow position: chr23:25594541-25594303 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 39

Conread position: 216-580
Cow position: chr23:3709982-3709618 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 85

Conread position: 217-568
Cow position: chr23:20541552-20541202 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 46

Conread position: 217-580
Cow position: chr23:14959378-14959737 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 218-441
Cow position: chr23:1048268-1048501 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 100

Conread position: 219-431
Cow position: chr23:5539555-5539767 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 105

Conread position: 237-589
Cow position: chr23:25554156-25553796 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 267

Conread position: 239-562
Cow position: chr23:36675596-36675915 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 60

Conread position: 255-579
Cow position: chr23:21277093-21277419 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 260-589
Cow position: chr23:27313383-27313049 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 6

Conread position: 263-589
Cow position: chr23:28987878-28987547 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 58, 9

Conread position: 265-589
Cow position: chr23:1010019-1010340 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 98

Conread position: 274-488
Cow position: chr23:25411976-25412194 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 65

Conread position: 312-589
Cow position: chr23:28233378-28233094 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 136, 122

Conread position: 313-589
Cow position: chr23:20170720-20170997 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 337-580
Cow position: chr23:771028-771277 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 32, 199

Conread position: 342-583
Cow position: chr23:1325857-1326102 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 220

Conread position: 345-589
Cow position: chr23:20389566-20389817 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 126

Conread position: 349-581
Cow position: chr23:24487249-24487485 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 187

Conread position: 349-589
Cow position: chr23:29459802-29460045 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 188

Conread position: 2-580
Cow position: chr24:12331804-12332400 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 145

Conread position: 2-589
Cow position: chr24:5929681-5929076 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 2-589
Cow position: chr24:6020176-6020781 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 3-395
Cow position: chr24:24250295-24249890 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-433
Cow position: chr24:17412317-17411876 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 153

Conread position: 3-452
Cow position: chr24:40445542-40445108 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 204, 102

Conread position: 3-473
Cow position: chr24:39159971-39160444 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 3-491
Cow position: chr24:25424580-25424086 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 154

Conread position: 3-512
Cow position: chr24:10243660-10244184 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-569
Cow position: chr24:29180248-29179684 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-580
Cow position: chr24:6413377-6412785 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 83

Conread position: 3-580
Cow position: chr24:8608230-8607636 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr24:27148978-27148411 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 30

Conread position: 3-581
Cow position: chr24:16055967-16056558 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 112

Conread position: 3-584
Cow position: chr24:14760800-14760195 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-584
Cow position: chr24:17309530-17310126 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 3-584
Cow position: chr24:41063358-41062756 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 94

Conread position: 3-587
Cow position: chr24:3851496-3850895 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 143

Conread position: 3-588
Cow position: chr24:22975707-22975106 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 32

Conread position: 3-589
Cow position: chr24:6416063-6415459 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 152

Conread position: 3-589
Cow position: chr24:12090873-12090277 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 263

Conread position: 3-589
Cow position: chr24:18266593-18267189 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 47

Conread position: 3-589
Cow position: chr24:22047172-22047772 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr24:32609205-32608608 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 42

Conread position: 3-589
Cow position: chr24:43635003-43634411 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 6-456
Cow position: chr24:35872358-35872786 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 40, 113

Conread position: 7-456
Cow position: chr24:25111145-25110684 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 151

Conread position: 9-376
Cow position: chr24:33291608-33291967 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 9-397
Cow position: chr24:11876448-11876033 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 9-502
Cow position: chr24:32359249-32359761 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 9-525
Cow position: chr24:25677592-25677073 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 9-580
Cow position: chr24:6035284-6035874 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr24:6443332-6442745 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 326

Conread position: 9-580
Cow position: chr24:20604645-20604056 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 139

Conread position: 9-588
Cow position: chr24:15372684-15372078 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 148

Conread position: 9-588
Cow position: chr24:20507156-20507754 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 9-589
Cow position: chr24:3794385-3793779 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 9-589
Cow position: chr24:5910716-5910104 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 9-589
Cow position: chr24:11104256-11104855 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr24:12146693-12147290 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr24:12696228-12696826 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr24:18113352-18112752 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr24:22795451-22794856 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 140

Conread position: 9-589
Cow position: chr24:26412942-26412346 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr24:32360962-32361556 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 238

Conread position: 9-589
Cow position: chr24:38296952-38296353 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr24:40466518-40467116 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 9-589
Cow position: chr24:45010079-45009484 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 10-589
Cow position: chr24:16080596-16081190 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 33

Conread position: 11-589
Cow position: chr24:31382260-31381696 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 12-580
Cow position: chr24:32854101-32853519 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 94

Conread position: 12-589
Cow position: chr24:32823241-32823825 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 13-536
Cow position: chr24:9176131-9176655 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 341
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 56

Conread position: 13-589
Cow position: chr24:12202618-12203214 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 104

Conread position: 13-589
Cow position: chr24:25372994-25372400 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 14-581
Cow position: chr24:31758411-31758982 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 18-373
Cow position: chr24:22288415-22288055 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 109

Conread position: 21-589
Cow position: chr24:40518729-40519306 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 27-568
Cow position: chr24:12991641-12991098 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 120

Conread position: 28-589
Cow position: chr24:11462133-11462714 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 123

Conread position: 28-589
Cow position: chr24:36710700-36710139 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 30-579
Cow position: chr24:40347205-40347766 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 34-489
Cow position: chr24:5607944-5608422 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 39-580
Cow position: chr24:45087388-45086830 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 45-529
Cow position: chr24:40253489-40253000 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 335
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 148, 116

Conread position: 50-568
Cow position: chr24:41671706-41671177 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 96

Conread position: 69-589
Cow position: chr24:17105048-17105580 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 58

Conread position: 76-508
Cow position: chr24:14308615-14308157 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 79

Conread position: 88-580
Cow position: chr24:36267990-36268498 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 58

Conread position: 90-512
Cow position: chr24:31302499-31302064 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 91-589
Cow position: chr24:32849940-32849436 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 333
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 105, 61

Conread position: 192-589
Cow position: chr24:17368237-17368625 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 211-484
Cow position: chr24:36131518-36131805 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 10

Conread position: 211-577
Cow position: chr24:31357266-31356906 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 117

Conread position: 211-580
Cow position: chr24:9071166-9071534 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 34

Conread position: 211-580
Cow position: chr24:35823525-35823898 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 211-580
Cow position: chr24:39956429-39956796 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 119

Conread position: 211-589
Cow position: chr24:15667072-15667450 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 54

Conread position: 211-589
Cow position: chr24:26388228-26388596 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chr24:36779941-36779568 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 113

Conread position: 217-468
Cow position: chr24:42581872-42582137 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 105

Conread position: 217-589
Cow position: chr24:33937603-33937226 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 123

Conread position: 218-587
Cow position: chr24:13191834-13191460 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 122

Conread position: 218-589
Cow position: chr24:28336390-28336760 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 111

Conread position: 220-561
Cow position: chr24:19251293-19250970 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 117

Conread position: 227-522
Cow position: chr24:37887002-37886709 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 44

Conread position: 232-521
Cow position: chr24:7404263-7404551 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 26

Conread position: 232-589
Cow position: chr24:36036171-36036529 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 108

Conread position: 281-587
Cow position: chr24:12119358-12119663 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 48

Conread position: 303-589
Cow position: chr24:25698526-25698241 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 246, 61

Conread position: 330-589
Cow position: chr24:36726715-36726453 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 336-589
Cow position: chr24:14609320-14609568 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 104

Conread position: 340-466
Cow position: chr24:39681064-39680940 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 38

Conread position: 347-589
Cow position: chr24:6524542-6524294 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 347-589
Cow position: chr24:36721990-36721741 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 7

Conread position: 348-581
Cow position: chr24:40120555-40120793 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 163

Conread position: 348-589
Cow position: chr24:5279757-5279509 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 188

Conread position: 353-572
Cow position: chr24:14515917-14516139 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 26

Conread position: 354-580
Cow position: chr24:25439743-25439508 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 391-581
Cow position: chr24:29181853-29181664 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 135

Conread position: 403-589
Cow position: chr24:24249017-24249205 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 45

Conread position: 413-574
Cow position: chr24:6544055-6543891 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 123

Conread position: 447-589
Cow position: chr24:39680934-39680792 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 103

Conread position: 2-583
Cow position: chr25:26914837-26914234 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 146

Conread position: 3-436
Cow position: chr25:32606926-32607359 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 93

Conread position: 3-456
Cow position: chr25:2046958-2047438 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 3-503
Cow position: chr25:41366566-41367065 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 107

Conread position: 3-572
Cow position: chr25:18490670-18490078 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 67

Conread position: 3-580
Cow position: chr25:11956420-11955835 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 35

Conread position: 3-580
Cow position: chr25:18474793-18474211 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-581
Cow position: chr25:28264938-28264351 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 12

Conread position: 3-587
Cow position: chr25:4522224-4522815 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 3-588
Cow position: chr25:9055258-9054668 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr25:10137423-10136818 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 323

Conread position: 3-589
Cow position: chr25:12081759-12082352 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 3-589
Cow position: chr25:17658208-17657614 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 101

Conread position: 3-589
Cow position: chr25:19367102-19367701 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 3-589
Cow position: chr25:20076085-20075474 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 43

Conread position: 3-589
Cow position: chr25:23394459-23393867 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 3-589
Cow position: chr25:26282623-26282019 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr25:27231945-27231353 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 3-589
Cow position: chr25:33838981-33838377 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 3-589
Cow position: chr25:39386236-39386835 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 4-581
Cow position: chr25:20496127-20495559 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 4-589
Cow position: chr25:28863467-28862866 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 5-481
Cow position: chr25:21950718-21950234 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 81

Conread position: 9-397
Cow position: chr25:33978821-33979215 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 9-430
Cow position: chr25:5568182-5568617 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 144

Conread position: 9-452
Cow position: chr25:26682152-26681712 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 44

Conread position: 9-580
Cow position: chr25:41121597-41121009 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 9-580
Cow position: chr25:41135165-41135741 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-584
Cow position: chr25:24636555-24637142 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 109

Conread position: 9-587
Cow position: chr25:16922206-16922793 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 9-589
Cow position: chr25:8655882-8655284 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr25:12755845-12756430 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr25:19924112-19923521 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr25:24227759-24228341 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 9-589
Cow position: chr25:29802152-29802751 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr25:34163969-34164567 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr25:35554261-35553664 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-579
Cow position: chr25:29312728-29313313 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 345

Conread position: 12-580
Cow position: chr25:17992557-17993137 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 135

Conread position: 13-457
Cow position: chr25:35612750-35613204 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 118

Conread position: 13-589
Cow position: chr25:40321709-40322296 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 14-589
Cow position: chr25:13960647-13960061 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 17-575
Cow position: chr25:16802022-16801449 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 27-580
Cow position: chr25:18270025-18269477 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 27-589
Cow position: chr25:7800588-7800018 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 129

Conread position: 27-589
Cow position: chr25:14755840-14756415 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 28-589
Cow position: chr25:25827023-25826442 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 45

Conread position: 38-589
Cow position: chr25:11044178-11043615 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 108

Conread position: 44-580
Cow position: chr25:37593959-37593409 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 72

Conread position: 45-589
Cow position: chr25:34673029-34673592 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 230

Conread position: 64-589
Cow position: chr25:19336790-19337331 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 82

Conread position: 96-579
Cow position: chr25:18424794-18424302 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 321
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 65

Conread position: 104-589
Cow position: chr25:13787461-13786968 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 42

Conread position: 151-488
Cow position: chr25:34768132-34767787 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 58, 195

Conread position: 157-589
Cow position: chr25:26353341-26353790 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 185

Conread position: 209-589
Cow position: chr25:3172037-3172405 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 103

Conread position: 211-588
Cow position: chr25:40389359-40389738 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr25:6955445-6955062 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr25:9395789-9395404 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 128

Conread position: 211-589
Cow position: chr25:19682666-19682289 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 249

Conread position: 211-589
Cow position: chr25:22151483-22151099 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 217-417
Cow position: chr25:27535810-27536017 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 75

Conread position: 222-589
Cow position: chr25:37648782-37648426 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 64

Conread position: 232-589
Cow position: chr25:26923195-26922835 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 242-589
Cow position: chr25:2516353-2516002 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 262

Conread position: 259-582
Cow position: chr25:23366997-23366665 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 48, 81

Conread position: 265-567
Cow position: chr25:34668272-34667964 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 65

Conread position: 272-532
Cow position: chr25:33039169-33039429 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 68

Conread position: 307-580
Cow position: chr25:34502941-34503218 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 32

Conread position: 340-589
Cow position: chr25:32577412-32577668 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 196

Conread position: 341-589
Cow position: chr25:23998941-23999189 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 25, 44

Conread position: 349-584
Cow position: chr25:26931337-26931096 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 362-589
Cow position: chr25:20633988-20633755 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 117

Conread position: 367-589
Cow position: chr25:10633787-10634012 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 68, 46

Conread position: 413-580
Cow position: chr25:28420527-28420701 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 447-589
Cow position: chr25:35571956-35571813 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 465-589
Cow position: chr25:21949917-21949792 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 2-468
Cow position: chr26:30652517-30653001 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 3-476
Cow position: chr26:9867518-9867976 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 306
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 304, 35

Conread position: 3-513
Cow position: chr26:12965039-12965527 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 40

Conread position: 3-578
Cow position: chr26:26281630-26281049 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 373
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 44, 25

Conread position: 3-580
Cow position: chr26:5680394-5679790 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr26:6430421-6429845 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 3-580
Cow position: chr26:17328024-17327422 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 150

Conread position: 3-581
Cow position: chr26:14173912-14173322 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 3-589
Cow position: chr26:8738562-8739167 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr26:11370542-11369947 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 3-589
Cow position: chr26:12125720-12126301 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 3-589
Cow position: chr26:22831184-22831786 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr26:31138112-31138696 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 89

Conread position: 4-560
Cow position: chr26:21859436-21858875 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 153

Conread position: 9-421
Cow position: chr26:15561363-15561775 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 100

Conread position: 9-580
Cow position: chr26:3187598-3187019 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-587
Cow position: chr26:18929124-18928534 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr26:1089027-1088434 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr26:8307907-8308514 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 9-589
Cow position: chr26:13806180-13806777 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr26:18857964-18857370 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr26:20019942-20019351 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr26:22692234-22691640 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr26:23890251-23889662 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 9-589
Cow position: chr26:26286714-26286109 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 9-589
Cow position: chr26:29434081-29433482 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr26:34265813-34265214 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-589
Cow position: chr26:9063942-9063337 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 120

Conread position: 10-589
Cow position: chr26:17288652-17288060 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 151

Conread position: 11-408
Cow position: chr26:31794378-31793973 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 327

Conread position: 12-583
Cow position: chr26:30786772-30786185 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 12-589
Cow position: chr26:1390828-1390232 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 182

Conread position: 12-589
Cow position: chr26:8084672-8084076 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr26:9115884-9115289 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr26:24239544-24238951 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 333

Conread position: 12-589
Cow position: chr26:25393630-25393036 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 64

Conread position: 30-522
Cow position: chr26:11296576-11297085 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 30-581
Cow position: chr26:17169650-17169089 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 33-589
Cow position: chr26:614407-614954 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 114

Conread position: 49-580
Cow position: chr26:30725101-30725658 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 97

Conread position: 50-584
Cow position: chr26:27986786-27987334 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 227

Conread position: 52-580
Cow position: chr26:20497345-20496796 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 94

Conread position: 52-587
Cow position: chr26:18877577-18877059 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 70

Conread position: 69-580
Cow position: chr26:4323933-4324454 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 69-589
Cow position: chr26:387466-386930 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 80

Conread position: 69-589
Cow position: chr26:9070350-9069811 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 71-456
Cow position: chr26:755597-755985 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 94-556
Cow position: chr26:30585597-30586071 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 52

Conread position: 97-507
Cow position: chr26:13976372-13976772 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 49

Conread position: 121-580
Cow position: chr26:14487528-14487997 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 26

Conread position: 209-589
Cow position: chr26:11269848-11269472 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 10

Conread position: 211-476
Cow position: chr26:6837242-6836985 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 91

Conread position: 211-503
Cow position: chr26:16720111-16719811 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 120

Conread position: 211-541
Cow position: chr26:10124528-10124846 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 159, 89

Conread position: 211-580
Cow position: chr26:13773677-13773311 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 211-588
Cow position: chr26:9694164-9694545 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 107

Conread position: 211-589
Cow position: chr26:10698882-10699248 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 62

Conread position: 211-589
Cow position: chr26:17428841-17429225 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 112

Conread position: 216-589
Cow position: chr26:9836100-9835718 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 24

Conread position: 217-489
Cow position: chr26:8653502-8653773 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 31

Conread position: 217-574
Cow position: chr26:3556502-3556843 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 27

Conread position: 217-589
Cow position: chr26:1885645-1885262 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 217

Conread position: 221-587
Cow position: chr26:2202152-2201782 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 102

Conread position: 232-588
Cow position: chr26:3923885-3924228 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 81

Conread position: 261-579
Cow position: chr26:2670236-2670557 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 108, 13

Conread position: 272-502
Cow position: chr26:21823035-21823267 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 56

Conread position: 330-580
Cow position: chr26:17182577-17182343 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 104

Conread position: 332-511
Cow position: chr26:12652398-12652580 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 82

Conread position: 348-589
Cow position: chr26:1915837-1915592 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 86, 181

Conread position: 349-587
Cow position: chr26:20186798-20186574 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 51

Conread position: 349-589
Cow position: chr26:16781672-16781424 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 351-584
Cow position: chr26:783759-784006 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 364-580
Cow position: chr26:46169-46390 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 374-581
Cow position: chr26:12668904-12668704 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 58

Conread position: 392-589
Cow position: chr26:3157568-3157365 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 143

Conread position: 2-502
Cow position: chr27:21283441-21283958 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-376
Cow position: chr27:8430060-8429676 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 3-417
Cow position: chr27:16823167-16823585 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 49, 97

Conread position: 3-456
Cow position: chr27:6620557-6621003 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 303
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 27

Conread position: 3-482
Cow position: chr27:13409805-13409307 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 350

Conread position: 3-512
Cow position: chr27:28984580-28984051 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 3-542
Cow position: chr27:27053688-27054242 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 3-569
Cow position: chr27:26785621-26785044 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-572
Cow position: chr27:14670020-14669413 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 290

Conread position: 3-576
Cow position: chr27:30677280-30677860 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 118

Conread position: 3-581
Cow position: chr27:9262469-9263064 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 117

Conread position: 3-583
Cow position: chr27:15272267-15272857 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr27:2332310-2331708 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr27:4330942-4331535 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 3-589
Cow position: chr27:13901933-13901329 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr27:25112969-25112367 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 40

Conread position: 3-589
Cow position: chr27:27728684-27729282 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 144

Conread position: 4-580
Cow position: chr27:11481739-11481146 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 113

Conread position: 9-407
Cow position: chr27:10321863-10321457 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 155

Conread position: 9-408
Cow position: chr27:12191076-12190666 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 9-499
Cow position: chr27:10324131-10324628 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 138

Conread position: 9-562
Cow position: chr27:9090428-9089878 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 71

Conread position: 9-577
Cow position: chr27:1502297-1501732 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 9-580
Cow position: chr27:8973249-8972659 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 278

Conread position: 9-581
Cow position: chr27:12277910-12277324 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr27:17564866-17565420 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 28

Conread position: 9-581
Cow position: chr27:18954838-18954257 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 136

Conread position: 9-589
Cow position: chr27:165118-165714 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 9-589
Cow position: chr27:1521483-1520885 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 332

Conread position: 9-589
Cow position: chr27:3652896-3653495 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr27:10306909-10306323 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 141

Conread position: 9-589
Cow position: chr27:13354110-13353511 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 139

Conread position: 9-589
Cow position: chr27:16030594-16031192 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr27:24295456-24296064 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 12-580
Cow position: chr27:21350645-21350063 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 120

Conread position: 12-584
Cow position: chr27:11434961-11434386 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 12-589
Cow position: chr27:20811217-20810626 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 13-537
Cow position: chr27:8296880-8297416 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 359
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 207

Conread position: 17-589
Cow position: chr27:9333466-9332882 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 133

Conread position: 27-589
Cow position: chr27:5914719-5914138 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 89

Conread position: 27-589
Cow position: chr27:19931772-19932361 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 27-589
Cow position: chr27:26330712-26330137 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 119

Conread position: 29-581
Cow position: chr27:2557211-2557775 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 117

Conread position: 45-576
Cow position: chr27:25783997-25784535 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 110

Conread position: 69-579
Cow position: chr27:8427613-8427074 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 364

Conread position: 83-416
Cow position: chr27:30176784-30177130 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 63

Conread position: 211-491
Cow position: chr27:2936411-2936130 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 54

Conread position: 211-568
Cow position: chr27:2682111-2681747 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 211-572
Cow position: chr27:27557387-27557025 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 105

Conread position: 211-580
Cow position: chr27:4982949-4982587 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 79

Conread position: 211-580
Cow position: chr27:30036467-30036084 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 211-589
Cow position: chr27:5983442-5983825 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 211-589
Cow position: chr27:6523694-6524073 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 60

Conread position: 211-589
Cow position: chr27:21392614-21392217 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 32

Conread position: 211-589
Cow position: chr27:27930790-27930413 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 211-589
Cow position: chr27:31546961-31547332 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 242
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 245, 88

Conread position: 212-581
Cow position: chr27:15406207-15405839 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 90

Conread position: 214-589
Cow position: chr27:19423804-19424172 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 92, 57

Conread position: 217-580
Cow position: chr27:3990218-3990585 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 122

Conread position: 217-589
Cow position: chr27:15866724-15867090 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 221-568
Cow position: chr27:13317134-13316786 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 119

Conread position: 221-580
Cow position: chr27:12239646-12239283 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 110

Conread position: 221-589
Cow position: chr27:15633764-15634137 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 78

Conread position: 232-589
Cow position: chr27:8592941-8592586 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 83, 40

Conread position: 233-589
Cow position: chr27:9970738-9970376 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 90

Conread position: 237-568
Cow position: chr27:25791976-25792324 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 34

Conread position: 252-581
Cow position: chr27:1536718-1536384 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 86

Conread position: 255-542
Cow position: chr27:27192805-27193094 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 115, 25

Conread position: 271-584
Cow position: chr27:3642942-3643248 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 177, 9

Conread position: 272-555
Cow position: chr27:2848908-2849180 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 97, 38

Conread position: 280-587
Cow position: chr27:20765252-20764955 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 307-589
Cow position: chr27:14380795-14380509 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 22

Conread position: 314-580
Cow position: chr27:4389475-4389218 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 106

Conread position: 333-580
Cow position: chr27:15870551-15870795 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 145

Conread position: 336-581
Cow position: chr27:16787833-16788084 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 337-588
Cow position: chr27:29467392-29467136 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 141

Conread position: 351-589
Cow position: chr27:15375252-15375019 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 231, 110

Conread position: 390-589
Cow position: chr27:25971190-25971396 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 91

Conread position: 392-575
Cow position: chr27:526343-526155 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 143

Conread position: 459-589
Cow position: chr27:15544351-15544220 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 3-441
Cow position: chr28:10529864-10530316 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 143

Conread position: 3-487
Cow position: chr28:5792308-5791824 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 72

Conread position: 3-569
Cow position: chr28:7981102-7981687 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 3-570
Cow position: chr28:10280684-10280113 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 3-577
Cow position: chr28:33640425-33639832 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-579
Cow position: chr28:12081076-12081659 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 150

Conread position: 3-580
Cow position: chr28:30098732-30098137 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr28:26922775-26923376 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 146

Conread position: 3-587
Cow position: chr28:34082414-34083019 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-588
Cow position: chr28:34598096-34597496 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr28:5941343-5940737 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr28:6047647-6047047 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr28:7005884-7005278 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-589
Cow position: chr28:8787161-8786567 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 153

Conread position: 3-589
Cow position: chr28:20310794-20310187 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 146

Conread position: 3-589
Cow position: chr28:20934543-20935161 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr28:21569744-21569144 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr28:22254336-22254947 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 360

Conread position: 3-589
Cow position: chr28:23620780-23620214 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-589
Cow position: chr28:26419145-26419750 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr28:29035795-29036401 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 144

Conread position: 3-589
Cow position: chr28:33256164-33255572 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 4-502
Cow position: chr28:13865401-13864889 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 4-589
Cow position: chr28:29434952-29435550 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 113

Conread position: 5-492
Cow position: chr28:29199327-29198826 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 5-580
Cow position: chr28:13372687-13373277 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 67

Conread position: 5-589
Cow position: chr28:3001012-3001605 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 9-417
Cow position: chr28:25767824-25767403 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-493
Cow position: chr28:24671866-24671370 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 234

Conread position: 9-501
Cow position: chr28:11787111-11787615 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-554
Cow position: chr28:1550689-1550121 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 378
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 17

Conread position: 9-558
Cow position: chr28:14493154-14492597 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 104

Conread position: 9-564
Cow position: chr28:12701717-12701144 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-579
Cow position: chr28:4957650-4958238 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 136

Conread position: 9-580
Cow position: chr28:16597997-16597411 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-580
Cow position: chr28:28356936-28357523 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 9-587
Cow position: chr28:25070696-25070100 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 146

Conread position: 9-587
Cow position: chr28:29222437-29223032 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr28:34731581-34730985 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 141

Conread position: 9-588
Cow position: chr28:10772920-10772335 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 81

Conread position: 9-589
Cow position: chr28:445249-444659 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr28:958707-958111 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 9-589
Cow position: chr28:1199045-1198446 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-589
Cow position: chr28:7336828-7336234 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 9-589
Cow position: chr28:9182718-9182120 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 9-589
Cow position: chr28:23615996-23615394 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 6

Conread position: 9-589
Cow position: chr28:23869082-23868489 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr28:24993337-24992738 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr28:25826264-25826867 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 8

Conread position: 9-589
Cow position: chr28:25829245-25828646 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr28:32589549-32588950 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-540
Cow position: chr28:17599134-17599682 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 133

Conread position: 11-589
Cow position: chr28:11501380-11501971 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 12-491
Cow position: chr28:25726972-25726476 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 13-558
Cow position: chr28:23544462-23543905 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 13-589
Cow position: chr28:15916682-15917274 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 87

Conread position: 13-589
Cow position: chr28:16211501-16212078 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 143

Conread position: 13-589
Cow position: chr28:23793734-23794322 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 25

Conread position: 15-589
Cow position: chr28:14234574-14234008 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 11

Conread position: 17-581
Cow position: chr28:17602200-17602781 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 192

Conread position: 17-589
Cow position: chr28:20966827-20967418 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 130

Conread position: 21-583
Cow position: chr28:7685093-7685679 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 26-589
Cow position: chr28:5335972-5336554 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 27-580
Cow position: chr28:5825681-5825110 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-584
Cow position: chr28:12935443-12936016 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 27-589
Cow position: chr28:15677467-15676886 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 28-425
Cow position: chr28:17151922-17151503 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 32-529
Cow position: chr28:17685821-17686329 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 33-589
Cow position: chr28:2280107-2280652 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 34-580
Cow position: chr28:600365-600923 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 122

Conread position: 35-589
Cow position: chr28:14666948-14666396 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 58-589
Cow position: chr28:24886659-24886111 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 68-512
Cow position: chr28:20964085-20964546 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 69-589
Cow position: chr28:4214680-4214143 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 77

Conread position: 80-583
Cow position: chr28:21380265-21379752 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 63

Conread position: 98-589
Cow position: chr28:30870828-30870323 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 58

Conread position: 117-589
Cow position: chr28:13463704-13463214 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 29

Conread position: 123-589
Cow position: chr28:8717222-8717702 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 14

Conread position: 194-589
Cow position: chr28:13607082-13606683 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 17

Conread position: 207-589
Cow position: chr28:25409270-25408887 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 137

Conread position: 210-589
Cow position: chr28:10162855-10162481 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 92

Conread position: 211-396
Cow position: chr28:17315030-17314846 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 112

Conread position: 211-427
Cow position: chr28:25804506-25804290 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 110

Conread position: 211-586
Cow position: chr28:17030462-17030840 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 91

Conread position: 211-586
Cow position: chr28:34677579-34677942 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 211-589
Cow position: chr28:10303472-10303089 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 211-589
Cow position: chr28:21896916-21896533 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 217-589
Cow position: chr28:7744733-7744348 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 217-589
Cow position: chr28:10578467-10578847 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 218-589
Cow position: chr28:25850186-25849812 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 37

Conread position: 221-589
Cow position: chr28:17392058-17391684 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 119

Conread position: 224-456
Cow position: chr28:34850775-34850544 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 96

Conread position: 227-417
Cow position: chr28:5054838-5055027 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 80, 96

Conread position: 230-589
Cow position: chr28:32785824-32786176 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 21

Conread position: 233-568
Cow position: chr28:6473648-6473983 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 36

Conread position: 236-586
Cow position: chr28:14512041-14511684 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 31

Conread position: 250-572
Cow position: chr28:23675393-23675083 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 254-521
Cow position: chr28:15497899-15498153 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 39

Conread position: 266-438
Cow position: chr28:7814219-7814051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 62

Conread position: 266-583
Cow position: chr28:10479320-10479633 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 26, 64

Conread position: 272-589
Cow position: chr28:13323707-13323384 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 57

Conread position: 304-587
Cow position: chr28:4045742-4045453 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 26

Conread position: 315-517
Cow position: chr28:1199915-1199702 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 21

Conread position: 319-580
Cow position: chr28:7784694-7784961 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 329-589
Cow position: chr28:1024815-1025082 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 332-581
Cow position: chr28:12998192-12997937 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 336-584
Cow position: chr28:17371133-17371375 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 180

Conread position: 341-589
Cow position: chr28:16181874-16181619 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 212

Conread position: 342-588
Cow position: chr28:15715476-15715225 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 172

Conread position: 348-568
Cow position: chr28:15687790-15687567 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 350-589
Cow position: chr28:5312471-5312225 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 186

Conread position: 358-584
Cow position: chr28:24735025-24734797 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 178

Conread position: 444-580
Cow position: chr28:28340252-28340117 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 86

Conread position: 456-581
Cow position: chr28:15589459-15589335 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 456-589
Cow position: chr28:15605002-15604868 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 74

Conread position: 1-589
Cow position: chr29:34780156-34780764 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 3-440
Cow position: chr29:29056771-29056336 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 52

Conread position: 3-481
Cow position: chr29:4120447-4119953 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 3-488
Cow position: chr29:8588910-8589418 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-504
Cow position: chr29:18026014-18025510 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 3-504
Cow position: chr29:27309862-27310362 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 3-511
Cow position: chr29:27814602-27814092 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 144

Conread position: 3-528
Cow position: chr29:2367215-2367750 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 3-565
Cow position: chr29:19761869-19761307 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 3-568
Cow position: chr29:6871447-6872038 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-572
Cow position: chr29:21255773-21255191 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 19

Conread position: 3-580
Cow position: chr29:19619442-19620037 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position: chr29:35076957-35076356 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-583
Cow position: chr29:6935310-6934713 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-584
Cow position: chr29:19514512-19515117 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 3-587
Cow position: chr29:1743326-1742728 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr29:10236832-10237443 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-587
Cow position: chr29:36209523-36208920 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 154

Conread position: 3-589
Cow position: chr29:649857-649274 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 134

Conread position: 3-589
Cow position: chr29:2744678-2745280 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 18

Conread position: 3-589
Cow position: chr29:5241222-5240616 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-589
Cow position: chr29:5977510-5978096 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 3-589
Cow position: chr29:7724496-7723888 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 152

Conread position: 3-589
Cow position: chr29:9078977-9079575 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr29:24578447-24577875 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 3-589
Cow position: chr29:32963130-32962537 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 94

Conread position: 3-589
Cow position: chr29:35738910-35739478 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 3-589
Cow position: chr29:38229827-38229229 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr29:40117148-40116526 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 3-589
Cow position: chr29:40498053-40498654 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr29:45463058-45462455 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 4-368
Cow position: chr29:18072522-18072149 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 153

Conread position: 9-385
Cow position: chr29:8667401-8667018 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 9-570
Cow position: chr29:7664179-7664757 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 9-579
Cow position: chr29:26997660-26997084 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 374
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 187, 29

Conread position: 9-580
Cow position: chr29:26161009-26161601 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 349

Conread position: 9-581
Cow position: chr29:4875317-4875900 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 147

Conread position: 9-584
Cow position: chr29:17154069-17153468 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 9-587
Cow position: chr29:2402507-2401912 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr29:31765861-31765264 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-588
Cow position: chr29:11786818-11786226 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 9-589
Cow position: chr29:1479271-1478673 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-589
Cow position: chr29:3330403-3329814 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:10031832-10032432 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:13586025-13585437 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:27702898-27702299 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:28656553-28657146 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 9-589
Cow position: chr29:32353416-32352819 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:34806014-34806600 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 9-589
Cow position: chr29:38349540-38350132 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr29:40157565-40156966 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr29:42807801-42807208 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-589
Cow position: chr29:2298518-2299097 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 203

Conread position: 13-431
Cow position: chr29:10154851-10154418 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 134

Conread position: 13-449
Cow position: chr29:16348027-16347580 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 133

Conread position: 13-580
Cow position: chr29:38410013-38409429 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 328

Conread position: 13-580
Cow position: chr29:45650744-45651309 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 13-587
Cow position: chr29:19891379-19890792 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-579
Cow position: chr29:9638729-9639296 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 14-589
Cow position: chr29:17408915-17408354 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 15-379
Cow position: chr29:4367251-4366884 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 73

Conread position: 15-525
Cow position: chr29:4058086-4057570 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 33

Conread position: 19-582
Cow position: chr29:11365825-11365248 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 114

Conread position: 27-456
Cow position: chr29:41183378-41183820 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 121

Conread position: 27-589
Cow position: chr29:19657684-19657103 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 30-587
Cow position: chr29:26263421-26262846 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 50-589
Cow position: chr29:5786274-5785716 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 96

Conread position: 53-580
Cow position: chr29:43517194-43517749 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 66

Conread position: 55-589
Cow position: chr29:21474923-21474371 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 91

Conread position: 67-589
Cow position: chr29:32543900-32543360 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 190

Conread position: 68-528
Cow position: chr29:24777957-24778416 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 45

Conread position: 68-540
Cow position: chr29:13043920-13044408 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 77

Conread position: 68-581
Cow position: chr29:3107048-3106536 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 87

Conread position: 69-376
Cow position: chr29:19946420-19946744 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 77

Conread position: 70-456
Cow position: chr29:16195368-16194972 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 77

Conread position: 80-587
Cow position: chr29:34736957-34737467 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 76

Conread position: 80-589
Cow position: chr29:12798333-12797804 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 101-444
Cow position: chr29:28621745-28622093 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 58

Conread position: 120-581
Cow position: chr29:32800979-32800507 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 29

Conread position: 135-589
Cow position: chr29:13128957-13129403 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 159

Conread position: 149-376
Cow position: chr29:35291338-35291104 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 198

Conread position: 207-507
Cow position: chr29:40096138-40095837 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 101

Conread position: 211-376
Cow position: chr29:30270247-30270412 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 129

Conread position: 211-589
Cow position: chr29:4164294-4163910 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 211-589
Cow position: chr29:7290150-7289771 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 103

Conread position: 211-589
Cow position: chr29:32515934-32515550 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr29:34851360-34850980 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr29:35955718-35956080 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 117

Conread position: 216-589
Cow position: chr29:43327116-43326736 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 114

Conread position: 217-580
Cow position: chr29:21445742-21446106 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 129

Conread position: 217-589
Cow position: chr29:108978-108606 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 85

Conread position: 217-589
Cow position: chr29:960798-960423 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 67

Conread position: 217-589
Cow position: chr29:23980305-23979932 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 224-560
Cow position: chr29:16614930-16615254 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 75, 100

Conread position: 232-581
Cow position: chr29:42940556-42940209 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 70

Conread position: 232-581
Cow position: chr29:43963971-43964327 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 237-449
Cow position: chr29:8069182-8068977 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 42

Conread position: 237-589
Cow position: chr29:13128977-13128631 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 86

Conread position: 241-506
Cow position: chr29:16662257-16661997 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 217, 81

Conread position: 264-504
Cow position: chr29:29615569-29615812 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 178, 38

Conread position: 272-589
Cow position: chr29:5961548-5961227 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 58

Conread position: 272-589
Cow position: chr29:35002129-35002452 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 68

Conread position: 288-589
Cow position: chr29:27259353-27259663 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 19, 43

Conread position: 297-587
Cow position: chr29:32644072-32643792 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 34

Conread position: 306-581
Cow position: chr29:7700875-7701159 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 110

Conread position: 324-589
Cow position: chr29:36633865-36634127 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 126

Conread position: 330-589
Cow position: chr29:3584730-3584990 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 171

Conread position: 337-589
Cow position: chr29:4864801-4864541 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 340-589
Cow position: chr29:24806933-24806677 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 196

Conread position: 351-589
Cow position: chr29:22746367-22746122 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 185

Conread position: 427-589
Cow position: chr29:4200761-4200600 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 17

Conread position: 447-589
Cow position: chr29:5787127-5787270 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 83

Conread position: 2-582
Cow position: chr3:38255375-38254788 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 397
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 24

Conread position: 2-589
Cow position: chr3:31225028-31224414 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 146

Conread position: 2-589
Cow position: chr3:70913520-70914127 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 3-415
Cow position: chr3:56335941-56336364 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 85

Conread position: 3-426
Cow position: chr3:77188022-77187590 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 231

Conread position: 3-438
Cow position: chr3:76923570-76924002 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 113

Conread position: 3-448
Cow position: chr3:28675561-28675098 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 145

Conread position: 3-488
Cow position: chr3:11019186-11018690 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-490
Cow position: chr3:12872835-12872355 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 3-516
Cow position: chr3:21100543-21100015 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 3-522
Cow position: chr3:77472260-77472785 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-528
Cow position: chr3:23944688-23944169 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 35

Conread position: 3-566
Cow position: chr3:76137067-76136478 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 168

Conread position: 3-569
Cow position: chr3:27867394-27866820 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-572
Cow position: chr3:72390655-72390072 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 80

Conread position: 3-580
Cow position: chr3:6689567-6688973 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 3-580
Cow position: chr3:24585488-24586085 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 55

Conread position: 3-580
Cow position: chr3:45978240-45977648 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr3:46506512-46505914 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-580
Cow position: chr3:53519520-53518949 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 3-580
Cow position: chr3:56644590-56645185 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-580
Cow position: chr3:58951193-58950607 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 39

Conread position: 3-580
Cow position: chr3:65989646-65989066 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 3-581
Cow position: chr3:58766868-58766288 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 144

Conread position: 3-583
Cow position: chr3:61678261-61677679 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 75

Conread position: 3-586
Cow position: chr3:64318466-64317888 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 211

Conread position: 3-587
Cow position: chr3:37982632-37983228 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 35

Conread position: 3-588
Cow position: chr3:5420303-5420908 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-588
Cow position: chr3:24433117-24432518 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-588
Cow position: chr3:78023707-78024299 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr3:16115140-16114541 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 3-589
Cow position: chr3:19752995-19753599 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 3-589
Cow position: chr3:19884194-19883606 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 343

Conread position: 3-589
Cow position: chr3:23497012-23497622 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 65

Conread position: 3-589
Cow position: chr3:26920465-26919858 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 41

Conread position: 3-589
Cow position: chr3:34556649-34557234 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-589
Cow position: chr3:42603394-42602792 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 3-589
Cow position: chr3:42847084-42846480 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-589
Cow position: chr3:45184267-45184849 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 40

Conread position: 3-589
Cow position: chr3:48362656-48362073 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 40

Conread position: 3-589
Cow position: chr3:48603996-48603388 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 3-589
Cow position: chr3:49416111-49416711 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 3-589
Cow position: chr3:49462830-49463424 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 144

Conread position: 3-589
Cow position: chr3:54653419-54654039 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr3:76188263-76187675 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 3-589
Cow position: chr3:84199510-84198918 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 4-572
Cow position: chr3:22220875-22220296 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 4-586
Cow position: chr3:23011091-23010490 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 4-589
Cow position: chr3:3884455-3885063 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 154

Conread position: 4-589
Cow position: chr3:59333296-59332717 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 5-472
Cow position: chr3:61278485-61278004 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 5-523
Cow position: chr3:2506909-2507438 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 128

Conread position: 9-433
Cow position: chr3:72376969-72376529 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 300

Conread position: 9-474
Cow position: chr3:54608278-54608756 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 9-487
Cow position: chr3:68401707-68402215 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 348

Conread position: 9-522
Cow position: chr3:49975795-49976323 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 9-569
Cow position: chr3:14613752-14613189 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 9-569
Cow position: chr3:68501192-68500616 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 9-577
Cow position: chr3:52651221-52651792 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 98

Conread position: 9-580
Cow position: chr3:6442801-6442214 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr3:13248286-13248874 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr3:65536849-65536260 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr3:14280410-14279831 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr3:5475274-5474677 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr3:46683568-46682971 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-587
Cow position: chr3:56298117-56297522 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 9-588
Cow position: chr3:14680816-14680224 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-588
Cow position: chr3:20476233-20475651 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:579914-579310 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 9-589
Cow position: chr3:7155072-7155671 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 173

Conread position: 9-589
Cow position: chr3:10244394-10243795 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr3:11418281-11417682 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:15417201-15416602 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:18758677-18759285 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 108

Conread position: 9-589
Cow position: chr3:18863172-18862576 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:19881784-19881185 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:20378985-20379581 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:20796027-20795429 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 128

Conread position: 9-589
Cow position: chr3:24265932-24265334 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:35043894-35043295 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:35919294-35918700 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 9-589
Cow position: chr3:37972762-37972170 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chr3:42187203-42186605 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr3:42993141-42993741 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 387
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 260

Conread position: 9-589
Cow position: chr3:43084952-43084379 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:44927548-44926949 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-589
Cow position: chr3:49604712-49605306 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr3:49610481-49611072 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:49907300-49907897 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 255

Conread position: 9-589
Cow position: chr3:59603532-59602937 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 9-589
Cow position: chr3:64655938-64655346 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-589
Cow position: chr3:65085668-65085070 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-589
Cow position: chr3:65474162-65473566 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:68870020-68870614 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 255

Conread position: 9-589
Cow position: chr3:74061202-74060605 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:76865166-76864567 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr3:78520780-78520183 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 331

Conread position: 10-537
Cow position: chr3:51597645-51597124 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 251

Conread position: 10-555
Cow position: chr3:67745046-67745611 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 10-581
Cow position: chr3:15655587-15656166 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 10-589
Cow position: chr3:22867244-22867832 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 195

Conread position: 11-478
Cow position: chr3:49132691-49133152 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 58

Conread position: 11-514
Cow position: chr3:19830429-19830946 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 338
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 70

Conread position: 11-517
Cow position: chr3:16716116-16716627 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 75

Conread position: 11-521
Cow position: chr3:18459956-18460490 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 113

Conread position: 11-581
Cow position: chr3:18352630-18353226 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 89

Conread position: 11-589
Cow position: chr3:37600464-37599872 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 275

Conread position: 11-589
Cow position: chr3:82932353-82931759 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 112

Conread position: 12-533
Cow position: chr3:11509139-11509657 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 347
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 14

Conread position: 12-580
Cow position: chr3:11785082-11784509 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr3:31022398-31021818 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 31

Conread position: 12-589
Cow position: chr3:34392554-34393151 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 15

Conread position: 13-580
Cow position: chr3:26722089-26722666 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-589
Cow position: chr3:44536246-44536852 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 13-589
Cow position: chr3:64375989-64376575 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 14-568
Cow position: chr3:49388382-49387806 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 117

Conread position: 15-589
Cow position: chr3:46753570-46752982 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 142

Conread position: 16-466
Cow position: chr3:19027732-19028190 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 125

Conread position: 21-580
Cow position: chr3:51234782-51235346 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 21-589
Cow position: chr3:2118174-2117582 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 27-580
Cow position: chr3:25057380-25056839 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-584
Cow position: chr3:13275561-13276140 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chr3:3301341-3300778 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chr3:49732062-49732660 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 544

Conread position: 29-501
Cow position: chr3:14648094-14647611 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 307
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 275

Conread position: 29-581
Cow position: chr3:30939212-30938641 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 100

Conread position: 29-588
Cow position: chr3:24276267-24275707 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 33-414
Cow position: chr3:56302098-56302489 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 123

Conread position: 36-587
Cow position: chr3:24352385-24351831 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 37-581
Cow position: chr3:17058785-17059310 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 62

Conread position: 45-568
Cow position: chr3:24454856-24455373 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 125

Conread position: 45-587
Cow position: chr3:45691361-45691902 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 107

Conread position: 47-589
Cow position: chr3:6897521-6896963 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 13

Conread position: 52-580
Cow position: chr3:51255088-51254546 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 94

Conread position: 58-589
Cow position: chr3:28435023-28435563 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 88

Conread position: 63-589
Cow position: chr3:30321920-30321394 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 67

Conread position: 69-580
Cow position: chr3:83767918-83767391 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 80

Conread position: 69-581
Cow position: chr3:3984798-3984253 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 48

Conread position: 89-580
Cow position: chr3:50461957-50461467 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 57

Conread position: 96-589
Cow position: chr3:12672752-12673239 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 103-572
Cow position: chr3:40206042-40205557 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 113-519
Cow position: chr3:21061105-21061530 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 277
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 42

Conread position: 150-589
Cow position: chr3:79596211-79595769 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 167

Conread position: 152-456
Cow position: chr3:36570839-36571160 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 208

Conread position: 207-587
Cow position: chr3:54863098-54863485 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 104

Conread position: 210-577
Cow position: chr3:25753783-25753403 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 317

Conread position: 211-427
Cow position: chr3:54959252-54959036 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 96, 129

Conread position: 211-432
Cow position: chr3:65204089-65204302 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 91

Conread position: 211-475
Cow position: chr3:82275150-82275413 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 169, 69

Conread position: 211-493
Cow position: chr3:67545134-67545406 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 101

Conread position: 211-580
Cow position: chr3:174017-173650 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 211-580
Cow position: chr3:597618-597253 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 82

Conread position: 211-580
Cow position: chr3:17460736-17460370 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 96

Conread position: 211-580
Cow position: chr3:29130609-29130240 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 79

Conread position: 211-580
Cow position: chr3:29391612-29391976 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 211-581
Cow position: chr3:16657355-16657724 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 61

Conread position: 211-581
Cow position: chr3:40003990-40004339 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 126

Conread position: 211-583
Cow position: chr3:6865169-6864802 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 211-589
Cow position: chr3:6529512-6529128 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr3:12676119-12676506 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 121

Conread position: 211-589
Cow position: chr3:16293395-16293773 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 211-589
Cow position: chr3:47986959-47986575 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr3:64654187-64653804 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 73

Conread position: 211-589
Cow position: chr3:69272121-69271737 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 214-584
Cow position: chr3:72669044-72669420 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 114

Conread position: 214-589
Cow position: chr3:77226234-77225869 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 94

Conread position: 217-541
Cow position: chr3:35030262-35030593 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 96, 82

Conread position: 217-581
Cow position: chr3:31050511-31050860 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 217-589
Cow position: chr3:40826910-40826534 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 217-589
Cow position: chr3:81101592-81101214 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 123

Conread position: 218-400
Cow position: chr3:30334326-30334142 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 120

Conread position: 218-579
Cow position: chr3:68343843-68344187 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 223, 51

Conread position: 218-589
Cow position: chr3:13723199-13723576 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 219-517
Cow position: chr3:56919579-56919277 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 105

Conread position: 219-589
Cow position: chr3:24572657-24573031 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 99

Conread position: 221-469
Cow position: chr3:11334354-11334605 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 94, 120

Conread position: 221-469
Cow position: chr3:11446952-11446693 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 237

Conread position: 224-589
Cow position: chr3:37451592-37451236 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 13

Conread position: 227-581
Cow position: chr3:56103240-56102884 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 44

Conread position: 231-577
Cow position: chr3:46006588-46006252 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 139, 79

Conread position: 232-456
Cow position: chr3:67284115-67283889 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 26

Conread position: 232-580
Cow position: chr3:14724608-14724265 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 39

Conread position: 233-543
Cow position: chr3:72006565-72006888 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 7

Conread position: 234-497
Cow position: chr3:60891760-60891487 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 95

Conread position: 236-589
Cow position: chr3:15988431-15988075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 247-583
Cow position: chr3:2851762-2852095 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 255-589
Cow position: chr3:77726907-77726591 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 37

Conread position: 257-589
Cow position: chr3:35056450-35056117 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 264-583
Cow position: chr3:39328005-39327690 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 266-580
Cow position: chr3:46857819-46858138 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 74

Conread position: 266-580
Cow position: chr3:64698258-64697971 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 103, 60

Conread position: 266-589
Cow position: chr3:64876237-64875909 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 74

Conread position: 267-589
Cow position: chr3:64281861-64282180 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 272-522
Cow position: chr3:68043046-68043301 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 46

Conread position: 272-580
Cow position: chr3:19794638-19794946 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 52

Conread position: 272-589
Cow position: chr3:73637338-73637016 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 35, 68

Conread position: 281-580
Cow position: chr3:31396817-31396519 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 59

Conread position: 306-560
Cow position: chr3:74853171-74852918 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 117

Conread position: 306-569
Cow position: chr3:8605491-8605753 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 10

Conread position: 306-581
Cow position: chr3:70322252-70322528 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 10

Conread position: 306-587
Cow position: chr3:50347233-50346953 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 195

Conread position: 306-589
Cow position: chr3:27674297-27674581 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 22

Conread position: 314-509
Cow position: chr3:4161045-4161239 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 330-512
Cow position: chr3:28640334-28640145 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 173

Conread position: 330-581
Cow position: chr3:8391757-8391510 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 162

Conread position: 330-589
Cow position: chr3:34464765-34464503 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 330-589
Cow position: chr3:49429368-49429618 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 48

Conread position: 331-561
Cow position: chr3:80818218-80817981 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 38

Conread position: 331-589
Cow position: chr3:15663048-15663308 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 171

Conread position: 331-589
Cow position: chr3:68274241-68273976 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 205

Conread position: 340-589
Cow position: chr3:29573736-29573990 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 63

Conread position: 340-589
Cow position: chr3:70215563-70215307 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 196

Conread position: 346-589
Cow position: chr3:48240637-48240388 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 24, 33

Conread position: 349-580
Cow position: chr3:2791131-2790897 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 33

Conread position: 354-589
Cow position: chr3:30623252-30623010 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 182

Conread position: 356-589
Cow position: chr3:38863095-38862860 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 93

Conread position: 360-584
Cow position: chr3:74847809-74848029 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 148

Conread position: 383-584
Cow position: chr3:10412593-10412388 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 15

Conread position: 386-577
Cow position: chr3:82891371-82891180 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 130

Conread position: 402-580
Cow position: chr3:63238707-63238884 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 97

Conread position: 415-580
Cow position: chr3:6854319-6854481 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 447-589
Cow position: chr3:5972262-5972405 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 135, 0

Conread position: 447-589
Cow position: chr3:37280674-37280531 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 83

Conread position: 1-502
Cow position: chr4:25972483-25971962 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 2-589
Cow position: chr4:47116384-47115777 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 146

Conread position: 3-448
Cow position: chr4:51122578-51122127 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 3-456
Cow position: chr4:18974030-18973574 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 97

Conread position: 3-507
Cow position: chr4:22743927-22743413 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 85

Conread position: 3-519
Cow position: chr4:61816858-61817392 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-521
Cow position: chr4:43898350-43898871 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 133

Conread position: 3-566
Cow position: chr4:359428-358845 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-568
Cow position: chr4:11107544-11108115 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 3-579
Cow position: chr4:61625043-61625614 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-580
Cow position: chr4:1499552-1500138 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 67

Conread position: 3-580
Cow position: chr4:17877505-17876908 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 3-580
Cow position: chr4:39458214-39457611 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 144

Conread position: 3-580
Cow position: chr4:57988289-57987696 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-583
Cow position: chr4:61651007-61651608 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 142

Conread position: 3-587
Cow position: chr4:962067-962645 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 34

Conread position: 3-588
Cow position: chr4:2601745-2601154 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-588
Cow position: chr4:41097501-41096921 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 64

Conread position: 3-589
Cow position: chr4:3475200-3474617 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-589
Cow position: chr4:3850140-3849540 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 3-589
Cow position: chr4:10122952-10122347 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 3-589
Cow position: chr4:10885181-10884581 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 55

Conread position: 3-589
Cow position: chr4:16642360-16641759 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 86

Conread position: 3-589
Cow position: chr4:19957573-19956966 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr4:22317285-22316666 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 473

Conread position: 3-589
Cow position: chr4:27178368-27177769 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-589
Cow position: chr4:27540209-27539606 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 3-589
Cow position: chr4:34223480-34222893 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr4:34713361-34712758 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr4:36025725-36026330 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr4:36755305-36754726 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr4:36899921-36899317 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-589
Cow position: chr4:37786846-37786243 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 146

Conread position: 3-589
Cow position: chr4:43840436-43841037 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 73

Conread position: 3-589
Cow position: chr4:43884631-43884034 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 90

Conread position: 3-589
Cow position: chr4:65919211-65918630 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 144

Conread position: 3-589
Cow position: chr4:67600134-67600727 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 35

Conread position: 4-576
Cow position: chr4:52086694-52086112 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 4-589
Cow position: chr4:54931084-54931665 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 142

Conread position: 5-506
Cow position: chr4:33644959-33645473 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 147

Conread position: 9-387
Cow position: chr4:48411370-48411760 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-414
Cow position: chr4:65464514-65464914 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 28

Conread position: 9-459
Cow position: chr4:31348630-31349089 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 64

Conread position: 9-560
Cow position: chr4:6446296-6445732 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 323

Conread position: 9-560
Cow position: chr4:22850139-22850704 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 9-580
Cow position: chr4:1007429-1006844 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 341

Conread position: 9-580
Cow position: chr4:54695496-54696079 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 9-581
Cow position: chr4:44901805-44901206 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 149

Conread position: 9-587
Cow position: chr4:35930009-35929425 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-588
Cow position: chr4:533828-533232 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 331

Conread position: 9-588
Cow position: chr4:8674272-8673680 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 143

Conread position: 9-589
Cow position: chr4:607145-606546 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chr4:2226226-2226822 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-589
Cow position: chr4:4419586-4418987 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:8678342-8677742 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 138

Conread position: 9-589
Cow position: chr4:10425017-10424433 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:15618234-15617635 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:18335407-18336009 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 9-589
Cow position: chr4:19265197-19264621 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 9-589
Cow position: chr4:23150119-23150716 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:30170815-30171425 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 9-589
Cow position: chr4:47264317-47263718 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-589
Cow position: chr4:49745211-49744612 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr4:54161527-54162122 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-447
Cow position: chr4:43070344-43069894 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 72

Conread position: 10-579
Cow position: chr4:68796234-68795666 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 135

Conread position: 10-580
Cow position: chr4:41976086-41976693 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 409
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 42, 51

Conread position: 11-517
Cow position: chr4:45078536-45079061 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 325

Conread position: 11-569
Cow position: chr4:1061353-1061904 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 11-584
Cow position: chr4:10553781-10553191 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 320

Conread position: 11-588
Cow position: chr4:12605345-12605928 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 140

Conread position: 11-589
Cow position: chr4:38181267-38180700 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 12-584
Cow position: chr4:19237599-19237016 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 92

Conread position: 12-587
Cow position: chr4:17235556-17234964 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr4:4085841-4086423 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 12-589
Cow position: chr4:24140412-24139814 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-507
Cow position: chr4:46526578-46526098 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 111

Conread position: 14-589
Cow position: chr4:15873122-15873693 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 17-427
Cow position: chr4:21532046-21532468 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 139

Conread position: 20-540
Cow position: chr4:47774063-47774601 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 97

Conread position: 27-584
Cow position: chr4:3450320-3449748 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chr4:60652104-60651534 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 28-589
Cow position: chr4:17833326-17833899 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 91

Conread position: 28-589
Cow position: chr4:18096098-18096669 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 380
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 181, 127

Conread position: 29-584
Cow position: chr4:11918434-11919004 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 118

Conread position: 30-589
Cow position: chr4:25983801-25983230 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 33-589
Cow position: chr4:41962411-41961837 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 113

Conread position: 35-588
Cow position: chr4:33180785-33181346 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 37-493
Cow position: chr4:16966795-16967257 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 38-518
Cow position: chr4:21364751-21364264 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 38-581
Cow position: chr4:11193459-11192905 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 88

Conread position: 42-589
Cow position: chr4:16832049-16832609 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 75

Conread position: 45-512
Cow position: chr4:34383918-34384388 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 60

Conread position: 45-582
Cow position: chr4:7214294-7214828 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 352
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 104, 133

Conread position: 45-588
Cow position: chr4:15813822-15814352 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 78

Conread position: 45-589
Cow position: chr4:3252052-3252603 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 64

Conread position: 45-589
Cow position: chr4:26746003-26745459 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 51-456
Cow position: chr4:8441752-8442168 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 42

Conread position: 63-580
Cow position: chr4:20091600-20091055 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 92

Conread position: 63-589
Cow position: chr4:3283885-3284417 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 189

Conread position: 69-452
Cow position: chr4:18108322-18107925 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 77

Conread position: 69-580
Cow position: chr4:26400237-26399741 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 81

Conread position: 69-589
Cow position: chr4:60856239-60855701 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 72-580
Cow position: chr4:8769509-8768994 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 75-583
Cow position: chr4:25192398-25192930 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 88-533
Cow position: chr4:45239807-45239346 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 57

Conread position: 88-589
Cow position: chr4:21342533-21342014 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 58

Conread position: 97-589
Cow position: chr4:27997218-27996717 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 49

Conread position: 104-580
Cow position: chr4:67767861-67767370 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 12

Conread position: 104-589
Cow position: chr4:48497122-48496618 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 51

Conread position: 109-589
Cow position: chr4:67394647-67394168 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 111-589
Cow position: chr4:29530022-29530516 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 113-542
Cow position: chr4:45764553-45764992 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 149-589
Cow position: chr4:30508601-30508140 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 417

Conread position: 207-589
Cow position: chr4:54190094-54189711 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 125

Conread position: 211-333
Cow position: chr4:66548696-66548817 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 211-407
Cow position: chr4:36892003-36891809 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 119

Conread position: 211-579
Cow position: chr4:27292591-27292936 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 233, 43

Conread position: 211-580
Cow position: chr4:61724536-61724192 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 240, 56

Conread position: 211-587
Cow position: chr4:19141343-19140945 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 211-589
Cow position: chr4:5874392-5874039 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 39

Conread position: 211-589
Cow position: chr4:11100278-11100654 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 120

Conread position: 211-589
Cow position: chr4:17775438-17775827 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 283

Conread position: 211-589
Cow position: chr4:23304032-23304400 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 40

Conread position: 211-589
Cow position: chr4:35868522-35868135 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 176

Conread position: 211-589
Cow position: chr4:38564369-38564753 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr4:46529928-46530304 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chr4:47079089-47079463 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 89

Conread position: 211-589
Cow position: chr4:61235826-61236202 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 91

Conread position: 211-589
Cow position: chr4:66174001-66174380 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 10

Conread position: 217-580
Cow position: chr4:16363519-16363151 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 113

Conread position: 217-587
Cow position: chr4:55509524-55509914 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 217-588
Cow position: chr4:20243475-20243098 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 123

Conread position: 217-589
Cow position: chr4:3170600-3170223 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 107

Conread position: 217-589
Cow position: chr4:61449835-61449454 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 321

Conread position: 218-584
Cow position: chr4:59783990-59783622 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 170

Conread position: 221-589
Cow position: chr4:1368756-1369118 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 221-589
Cow position: chr4:3961581-3961953 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 119

Conread position: 221-589
Cow position: chr4:68880838-68880454 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 325

Conread position: 224-589
Cow position: chr4:6167656-6168030 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 227-588
Cow position: chr4:1239118-1239480 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 261

Conread position: 231-589
Cow position: chr4:12751680-12751305 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 131, 71

Conread position: 232-581
Cow position: chr4:65842580-65842943 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 264

Conread position: 232-589
Cow position: chr4:26468528-26468172 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 236-589
Cow position: chr4:19049561-19049202 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 93

Conread position: 238-580
Cow position: chr4:6487070-6487416 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 240-512
Cow position: chr4:48798375-48798640 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 130, 62

Conread position: 241-589
Cow position: chr4:23451731-23452071 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 87

Conread position: 242-589
Cow position: chr4:21297491-21297840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 52

Conread position: 245-589
Cow position: chr4:16605871-16606234 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 299

Conread position: 260-581
Cow position: chr4:36812285-36811971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 60

Conread position: 267-589
Cow position: chr4:65581786-65581456 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 62

Conread position: 272-491
Cow position: chr4:43836095-43835879 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 272-589
Cow position: chr4:10822618-10822927 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 98, 36

Conread position: 272-589
Cow position: chr4:54973309-54972991 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 21

Conread position: 301-589
Cow position: chr4:58859373-58859662 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 135, 47

Conread position: 303-589
Cow position: chr4:45653940-45654231 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 103

Conread position: 313-589
Cow position: chr4:22724159-22723885 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 46

Conread position: 319-557
Cow position: chr4:55520569-55520327 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 129, 45

Conread position: 319-589
Cow position: chr4:17473300-17473028 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 82

Conread position: 329-587
Cow position: chr4:34166837-34167090 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 50

Conread position: 329-589
Cow position: chr4:45499380-45499125 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 115

Conread position: 330-525
Cow position: chr4:14817528-14817728 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 124

Conread position: 330-585
Cow position: chr4:21364275-21364022 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 44

Conread position: 331-589
Cow position: chr4:25878625-25878364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 235

Conread position: 332-584
Cow position: chr4:41038029-41037775 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 5

Conread position: 340-587
Cow position: chr4:9168898-9169149 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 36

Conread position: 340-589
Cow position: chr4:14539112-14539357 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 144

Conread position: 340-589
Cow position: chr4:65431467-65431222 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 342-568
Cow position: chr4:15463237-15463467 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 80

Conread position: 348-578
Cow position: chr4:32911-33140 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 81

Conread position: 351-506
Cow position: chr4:56369934-56369769 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 352-589
Cow position: chr4:14919221-14918998 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 93

Conread position: 360-589
Cow position: chr4:34175805-34176041 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 364-589
Cow position: chr4:6000262-6000492 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 212

Conread position: 373-589
Cow position: chr4:21843357-21843579 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 162

Conread position: 383-589
Cow position: chr4:27293943-27294147 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 30

Conread position: 383-589
Cow position: chr4:61192134-61191929 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 117

Conread position: 391-566
Cow position: chr4:4126879-4126702 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 392-568
Cow position: chr4:5578678-5578859 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 396-581
Cow position: chr4:12455103-12454914 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 114

Conread position: 396-581
Cow position: chr4:13254804-13254615 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 170

Conread position: 396-587
Cow position: chr4:41957901-41957704 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 139

Conread position: 404-589
Cow position: chr4:1047132-1047323 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 131

Conread position: 419-566
Cow position: chr4:50977640-50977492 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 429-580
Cow position: chr4:14142409-14142258 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 18

Conread position: 447-584
Cow position: chr4:20606718-20606581 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 447-589
Cow position: chr4:32215237-32215095 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 37

Conread position: 3-397
Cow position: chr5:25231387-25231792 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 3-452
Cow position: chr5:36406790-36406340 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 3-479
Cow position: chr5:31217733-31217244 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 3-537
Cow position: chr5:39447913-39448450 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 187

Conread position: 3-560
Cow position: chr5:14904435-14905000 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 307

Conread position: 3-568
Cow position: chr5:58004866-58004295 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-572
Cow position: chr5:5937945-5937365 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-574
Cow position: chr5:41067644-41067072 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 3-579
Cow position: chr5:27548868-27549455 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr5:6575941-6576542 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-580
Cow position: chr5:56442903-56442310 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr5:58245977-58245383 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 111

Conread position: 3-581
Cow position: chr5:21828477-21827870 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-581
Cow position: chr5:32964414-32965010 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-581
Cow position: chr5:40928388-40928970 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-581
Cow position: chr5:53835316-53834702 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 150

Conread position: 3-581
Cow position: chr5:57935484-57936072 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 64

Conread position: 3-583
Cow position: chr5:47343520-47342921 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-584
Cow position: chr5:6571609-6572194 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 144

Conread position: 3-584
Cow position: chr5:43437295-43437896 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 3-587
Cow position: chr5:48224954-48225534 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 35

Conread position: 3-588
Cow position: chr5:7553399-7552818 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 3-589
Cow position: chr5:2918101-2917503 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-589
Cow position: chr5:3544941-3544349 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr5:7175944-7175339 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr5:15722674-15723275 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 151

Conread position: 3-589
Cow position: chr5:17027714-17027118 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 3-589
Cow position: chr5:18492052-18491447 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 40

Conread position: 3-589
Cow position: chr5:21189863-21189262 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-589
Cow position: chr5:28224081-28223481 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 24

Conread position: 3-589
Cow position: chr5:30582972-30582367 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-589
Cow position: chr5:34528194-34527618 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 34

Conread position: 3-589
Cow position: chr5:34709413-34708810 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-589
Cow position: chr5:45705652-45705053 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 150

Conread position: 3-589
Cow position: chr5:46677256-46676654 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr5:55631710-55631105 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr5:59082571-59083168 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-589
Cow position: chr5:62159269-62159884 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 160

Conread position: 3-589
Cow position: chr5:64778360-64778961 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-589
Cow position: chr5:72046023-72046622 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 4-503
Cow position: chr5:39936746-39936228 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 77

Conread position: 4-589
Cow position: chr5:41228404-41229006 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 4-589
Cow position: chr5:51502509-51501925 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 41

Conread position: 5-580
Cow position: chr5:10922490-10921896 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 121

Conread position: 9-379
Cow position: chr5:42667776-42668166 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 7

Conread position: 9-441
Cow position: chr5:46295057-46295490 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 9-577
Cow position: chr5:28013497-28012911 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-578
Cow position: chr5:42676884-42676300 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 315

Conread position: 9-580
Cow position: chr5:2977428-2976837 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-580
Cow position: chr5:46780150-46779567 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 9-580
Cow position: chr5:54337538-54336953 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 94

Conread position: 9-581
Cow position: chr5:15677700-15677111 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 142

Conread position: 9-581
Cow position: chr5:39363511-39362922 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-587
Cow position: chr5:5106863-5106267 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-588
Cow position: chr5:6773205-6772610 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr5:442674-443268 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 63

Conread position: 9-589
Cow position: chr5:446134-445520 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 9-589
Cow position: chr5:6124523-6125121 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr5:7140469-7141059 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 9-589
Cow position: chr5:10261628-10262234 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 9-589
Cow position: chr5:26053371-26052772 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr5:31560868-31560285 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 97

Conread position: 9-589
Cow position: chr5:35207876-35207283 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-589
Cow position: chr5:40357331-40357903 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 83

Conread position: 9-589
Cow position: chr5:41586914-41586315 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr5:43991900-43991323 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 114

Conread position: 9-589
Cow position: chr5:45179209-45179805 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr5:51165671-51166268 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 114

Conread position: 9-589
Cow position: chr5:51746858-51746265 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 327

Conread position: 9-589
Cow position: chr5:55723169-55722570 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr5:59065083-59064485 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 12-369
Cow position: chr5:31097190-31097552 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 135

Conread position: 12-497
Cow position: chr5:41981014-41980531 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 76

Conread position: 12-512
Cow position: chr5:58145025-58145523 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 26

Conread position: 12-513
Cow position: chr5:6901136-6901650 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 12-584
Cow position: chr5:19969420-19969985 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 12-589
Cow position: chr5:21188568-21187975 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 12-589
Cow position: chr5:44708734-44709329 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 12-589
Cow position: chr5:46667706-46667115 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 19

Conread position: 12-589
Cow position: chr5:62436760-62436164 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 139

Conread position: 21-580
Cow position: chr5:31635052-31634489 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 21-581
Cow position: chr5:32697182-32697752 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 107

Conread position: 21-581
Cow position: chr5:41392346-41391779 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 27-580
Cow position: chr5:14550981-14551550 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 324

Conread position: 27-589
Cow position: chr5:5681886-5682470 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 28-522
Cow position: chr5:14557834-14558349 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 28-587
Cow position: chr5:54722270-54721699 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 43

Conread position: 29-587
Cow position: chr5:54089304-54088764 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 106

Conread position: 33-569
Cow position: chr5:6670565-6671107 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 34-456
Cow position: chr5:32339345-32339776 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 16, 31

Conread position: 45-542
Cow position: chr5:70349013-70348493 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 342
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 112, 101

Conread position: 45-577
Cow position: chr5:55088470-55087907 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 110

Conread position: 49-418
Cow position: chr5:7581522-7581887 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 104, 27

Conread position: 50-580
Cow position: chr5:8996428-8996955 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 50-589
Cow position: chr5:58192513-58191959 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 56-589
Cow position: chr5:24102242-24101691 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 56-589
Cow position: chr5:24299605-24299054 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 57-465
Cow position: chr5:34886080-34886501 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 296
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 137

Conread position: 64-580
Cow position: chr5:46672188-46671661 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 72

Conread position: 68-520
Cow position: chr5:39815732-39816189 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 87

Conread position: 68-586
Cow position: chr5:46797478-46796953 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 78

Conread position: 69-544
Cow position: chr5:7042804-7042331 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 80

Conread position: 69-575
Cow position: chr5:69520185-69519650 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 77

Conread position: 69-589
Cow position: chr5:12134172-12133635 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 71-522
Cow position: chr5:48804893-48805352 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 75

Conread position: 76-414
Cow position: chr5:21547732-21548069 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 73, 55

Conread position: 76-484
Cow position: chr5:47601335-47600915 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 86

Conread position: 86-587
Cow position: chr5:42744346-42743836 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 44

Conread position: 87-587
Cow position: chr5:52605045-52605582 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 68

Conread position: 98-589
Cow position: chr5:15760826-15761329 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 48

Conread position: 101-589
Cow position: chr5:18702892-18703384 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 213

Conread position: 105-589
Cow position: chr5:21524586-21524094 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 117-589
Cow position: chr5:42044369-42043886 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 333
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 83, 44

Conread position: 123-443
Cow position: chr5:14876907-14877246 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 31

Conread position: 133-568
Cow position: chr5:13259092-13258653 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 204

Conread position: 149-587
Cow position: chr5:41548057-41548501 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 204

Conread position: 153-589
Cow position: chr5:49566061-49565613 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 185

Conread position: 181-580
Cow position: chr5:37735831-37735427 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 192-581
Cow position: chr5:16894687-16895096 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 207-431
Cow position: chr5:66113012-66113230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 18

Conread position: 207-580
Cow position: chr5:29559018-29558648 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 116

Conread position: 211-387
Cow position: chr5:38831643-38831466 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 91, 126

Conread position: 211-441
Cow position: chr5:28928362-28928591 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 158, 126

Conread position: 211-493
Cow position: chr5:54454912-54454634 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 111

Conread position: 211-512
Cow position: chr5:6839755-6840061 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 190

Conread position: 211-566
Cow position: chr5:46708080-46707702 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 211-568
Cow position: chr5:45941571-45941928 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 100

Conread position: 211-571
Cow position: chr5:25920370-25920721 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 69

Conread position: 211-580
Cow position: chr5:295686-295316 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-581
Cow position: chr5:15362462-15362094 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 125

Conread position: 211-589
Cow position: chr5:4166049-4165672 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 41

Conread position: 211-589
Cow position: chr5:30302257-30301894 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 89

Conread position: 211-589
Cow position: chr5:52829362-52829743 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 91

Conread position: 212-589
Cow position: chr5:68593844-68593476 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 128

Conread position: 216-581
Cow position: chr5:38738446-38738079 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 106

Conread position: 217-528
Cow position: chr5:21119056-21118747 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 197
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 85

Conread position: 217-577
Cow position: chr5:33775365-33775719 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 278

Conread position: 218-504
Cow position: chr5:38379405-38379119 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 84

Conread position: 218-588
Cow position: chr5:49912427-49912048 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 249

Conread position: 218-589
Cow position: chr5:18667725-18667348 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 218-589
Cow position: chr5:58199427-58199051 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 219-551
Cow position: chr5:18275865-18275555 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 83

Conread position: 221-406
Cow position: chr5:33064540-33064719 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 63

Conread position: 230-580
Cow position: chr5:75755985-75755636 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 69, 177

Conread position: 231-583
Cow position: chr5:28026787-28026446 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 67

Conread position: 232-522
Cow position: chr5:17425745-17426041 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 105

Conread position: 232-524
Cow position: chr5:40827975-40828272 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 233-587
Cow position: chr5:9002708-9003067 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 80

Conread position: 236-589
Cow position: chr5:47855226-47854868 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 88

Conread position: 251-581
Cow position: chr5:28331244-28331574 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 11

Conread position: 256-588
Cow position: chr5:4348626-4348946 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 89, 54

Conread position: 257-589
Cow position: chr5:12212913-12212574 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 84

Conread position: 257-589
Cow position: chr5:12337652-12337315 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 71

Conread position: 257-589
Cow position: chr5:41489048-41488711 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 258-589
Cow position: chr5:32810652-32810985 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 259-587
Cow position: chr5:30294674-30294351 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 54

Conread position: 259-589
Cow position: chr5:15455128-15454816 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 58

Conread position: 259-589
Cow position: chr5:64844890-64845224 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 36

Conread position: 262-589
Cow position: chr5:40792205-40791877 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 108, 77

Conread position: 280-589
Cow position: chr5:71456693-71457005 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 49

Conread position: 283-569
Cow position: chr5:48535190-48534914 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 58

Conread position: 287-560
Cow position: chr5:12558228-12558510 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 51

Conread position: 302-588
Cow position: chr5:31921391-31921107 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 37

Conread position: 306-580
Cow position: chr5:58353534-58353269 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 63, 33

Conread position: 306-589
Cow position: chr5:14542972-14543260 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 330-568
Cow position: chr5:35180436-35180192 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 199

Conread position: 330-589
Cow position: chr5:17645776-17646044 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 6

Conread position: 331-487
Cow position: chr5:11437337-11437494 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 23

Conread position: 331-589
Cow position: chr5:47871802-47872065 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 205

Conread position: 343-589
Cow position: chr5:6044292-6044043 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 27, 158

Conread position: 345-589
Cow position: chr5:8529937-8529692 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 61

Conread position: 347-580
Cow position: chr5:26134978-26135217 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 351-589
Cow position: chr5:33536897-33536658 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 353-587
Cow position: chr5:2704275-2704509 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 16

Conread position: 353-589
Cow position: chr5:24159219-24158976 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 183

Conread position: 367-589
Cow position: chr5:46650366-46650138 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 166

Conread position: 401-587
Cow position: chr5:51293726-51293918 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 407-577
Cow position: chr5:26082406-26082577 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 87

Conread position: 409-580
Cow position: chr5:25901252-25901423 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 39

Conread position: 444-580
Cow position: chr5:69771249-69771112 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 447-589
Cow position: chr5:47697022-47697165 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 469-582
Cow position: chr5:50604192-50604305 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-392
Cow position: chr6:63197539-63197936 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 78, 174

Conread position: 3-403
Cow position: chr6:13741333-13740927 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 144

Conread position: 3-417
Cow position: chr6:25218564-25218138 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 143

Conread position: 3-441
Cow position: chr6:6201114-6200665 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-513
Cow position: chr6:55170248-55169741 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 29

Conread position: 3-574
Cow position: chr6:16593729-16593146 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 103

Conread position: 3-580
Cow position: chr6:1263943-1263352 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-580
Cow position: chr6:15275456-15276050 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr6:24623361-24623950 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-581
Cow position: chr6:28156488-28157076 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-583
Cow position: chr6:17344980-17344386 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 3-586
Cow position: chr6:16675452-16674862 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-587
Cow position: chr6:10695495-10694904 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 114

Conread position: 3-587
Cow position: chr6:44098466-44097890 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 57

Conread position: 3-589
Cow position: chr6:479331-478730 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr6:1834779-1834175 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 3-589
Cow position: chr6:6459894-6459294 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr6:9737479-9738074 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 3-589
Cow position: chr6:11402105-11401500 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr6:14949875-14950472 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 312

Conread position: 3-589
Cow position: chr6:16410833-16410238 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 39

Conread position: 3-589
Cow position: chr6:17050155-17049553 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr6:20451741-20451140 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 3-589
Cow position: chr6:23879274-23879876 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr6:24243070-24242469 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 3-589
Cow position: chr6:27887706-27887092 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 134

Conread position: 3-589
Cow position: chr6:36532060-36531453 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr6:41232247-41231668 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 45

Conread position: 3-589
Cow position: chr6:46292690-46293264 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 148

Conread position: 3-589
Cow position: chr6:51674545-51673952 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 24

Conread position: 3-589
Cow position: chr6:52248750-52249334 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 3-589
Cow position: chr6:54357746-54358338 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-589
Cow position: chr6:59507976-59507405 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 5-584
Cow position: chr6:3928905-3928323 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 51

Conread position: 5-588
Cow position: chr6:2366512-2367080 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 89

Conread position: 9-376
Cow position: chr6:16737650-16737273 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 126

Conread position: 9-484
Cow position: chr6:366845-366347 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-502
Cow position: chr6:57680758-57681262 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 9-517
Cow position: chr6:51970237-51970753 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 349
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 151

Conread position: 9-580
Cow position: chr6:3885728-3886315 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-580
Cow position: chr6:16417912-16418492 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-580
Cow position: chr6:33466733-33466148 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-580
Cow position: chr6:60877074-60876486 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-583
Cow position: chr6:3271702-3272295 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-588
Cow position: chr6:55239469-55238871 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:223720-224325 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:327584-328183 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:1797404-1796807 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr6:2090037-2089456 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 9-589
Cow position: chr6:7137563-7138161 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 138

Conread position: 9-589
Cow position: chr6:7449274-7448675 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:10044985-10044395 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:12387696-12388274 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 147

Conread position: 9-589
Cow position: chr6:14929223-14928639 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 9-589
Cow position: chr6:16049517-16050112 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:16645650-16645076 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 184

Conread position: 9-589
Cow position: chr6:18803280-18803879 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:18911955-18912554 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr6:19719349-19718765 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 118

Conread position: 9-589
Cow position: chr6:21164082-21163483 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:28161184-28160589 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 6

Conread position: 9-589
Cow position: chr6:34494447-34493855 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 133

Conread position: 9-589
Cow position: chr6:35416206-35416792 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 104

Conread position: 9-589
Cow position: chr6:39330753-39331351 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:40278831-40278239 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:45976278-45975679 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:46633892-46633299 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 9-589
Cow position: chr6:46948591-46947998 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 9-589
Cow position: chr6:51718334-51717735 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:60379942-60379343 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr6:62665554-62664955 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 11-542
Cow position: chr6:49733562-49733010 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 11-589
Cow position: chr6:24631476-24632065 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 146

Conread position: 12-587
Cow position: chr6:16625567-16624958 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 12-589
Cow position: chr6:706770-706178 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 12-589
Cow position: chr6:55903865-55903269 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-438
Cow position: chr6:47988686-47988262 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 13-588
Cow position: chr6:42267491-42266914 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-589
Cow position: chr6:889329-888737 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 133

Conread position: 15-589
Cow position: chr6:39137264-39136684 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 17-584
Cow position: chr6:47381441-47380852 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 133

Conread position: 17-589
Cow position: chr6:14850990-14851566 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 133

Conread position: 22-589
Cow position: chr6:11721450-11722028 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 24-524
Cow position: chr6:58037044-58036528 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 45

Conread position: 27-580
Cow position: chr6:65874556-65875094 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 27-589
Cow position: chr6:33301429-33300845 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 27-589
Cow position: chr6:46763646-46764222 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 28-589
Cow position: chr6:59597015-59596423 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 34-589
Cow position: chr6:43797145-43797721 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 113

Conread position: 45-587
Cow position: chr6:16220444-16220947 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 104

Conread position: 45-588
Cow position: chr6:9755875-9756420 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 366
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 109, 14

Conread position: 45-589
Cow position: chr6:9322731-9322183 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 45-589
Cow position: chr6:46283364-46283918 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 102

Conread position: 48-589
Cow position: chr6:11192849-11193407 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 39

Conread position: 58-589
Cow position: chr6:46225236-46225782 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 58-589
Cow position: chr6:58031494-58030957 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 50

Conread position: 68-589
Cow position: chr6:35825756-35825227 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 191

Conread position: 68-589
Cow position: chr6:42988083-42988622 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 87

Conread position: 69-589
Cow position: chr6:7216501-7215975 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 18

Conread position: 69-589
Cow position: chr6:39913040-39912504 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 71-492
Cow position: chr6:8535083-8535516 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 78

Conread position: 72-523
Cow position: chr6:42897905-42897434 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 74-582
Cow position: chr6:14897893-14897368 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 87-585
Cow position: chr6:12352538-12352028 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 27

Conread position: 88-425
Cow position: chr6:32125647-32125295 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 232

Conread position: 100-589
Cow position: chr6:35601347-35600859 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 35

Conread position: 102-415
Cow position: chr6:6100466-6100791 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 107, 54

Conread position: 108-589
Cow position: chr6:51150621-51150122 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 116-589
Cow position: chr6:50571862-50571371 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 30

Conread position: 117-589
Cow position: chr6:10650139-10650613 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 27

Conread position: 165-584
Cow position: chr6:5096209-5096620 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 171-493
Cow position: chr6:68047319-68047641 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 121

Conread position: 211-486
Cow position: chr6:58914774-58915052 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 10

Conread position: 211-487
Cow position: chr6:227718-227445 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 96, 23

Conread position: 211-504
Cow position: chr6:40031594-40031303 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 237, 87

Conread position: 211-510
Cow position: chr6:10681547-10681245 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 111

Conread position: 211-568
Cow position: chr6:181987-182343 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 211-581
Cow position: chr6:41677491-41677120 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 211-587
Cow position: chr6:8633775-8634123 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 38

Conread position: 211-588
Cow position: chr6:53542919-53543302 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 112

Conread position: 211-589
Cow position: chr6:15481119-15480751 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 211-589
Cow position: chr6:57857334-57856950 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 129

Conread position: 216-457
Cow position: chr6:67213933-67213694 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 86, 101

Conread position: 216-589
Cow position: chr6:1537253-1536885 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 217-580
Cow position: chr6:60332903-60332533 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 121

Conread position: 217-587
Cow position: chr6:6601352-6601713 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 85

Conread position: 217-589
Cow position: chr6:11638650-11639026 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 217-589
Cow position: chr6:56926291-56925913 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 107

Conread position: 217-589
Cow position: chr6:64719873-64719498 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 122

Conread position: 218-580
Cow position: chr6:19243589-19243226 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 105

Conread position: 219-589
Cow position: chr6:57383971-57383596 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 218
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 186, 65

Conread position: 221-589
Cow position: chr6:31941421-31941047 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 102

Conread position: 234-456
Cow position: chr6:12629491-12629273 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 68

Conread position: 234-588
Cow position: chr6:16703218-16703562 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 69

Conread position: 236-581
Cow position: chr6:21588521-21588173 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 240-535
Cow position: chr6:47025587-47025287 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 176, 62

Conread position: 240-589
Cow position: chr6:43187644-43187289 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 100

Conread position: 241-589
Cow position: chr6:32018570-32018935 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 89

Conread position: 243-589
Cow position: chr6:38439142-38438786 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 50

Conread position: 246-587
Cow position: chr6:55474842-55474488 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 259-589
Cow position: chr6:2618050-2618386 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 259-589
Cow position: chr6:7105014-7105348 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 164

Conread position: 260-506
Cow position: chr6:66751286-66751037 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 79

Conread position: 280-589
Cow position: chr6:65941517-65941828 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 286-580
Cow position: chr6:4903512-4903806 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 54

Conread position: 289-587
Cow position: chr6:14144507-14144204 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 34

Conread position: 298-589
Cow position: chr6:3893159-3893462 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 175

Conread position: 303-589
Cow position: chr6:59619547-59619256 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 45, 56

Conread position: 310-588
Cow position: chr6:64426247-64425972 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 130, 48

Conread position: 310-589
Cow position: chr6:6595883-6595604 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 36

Conread position: 319-580
Cow position: chr6:10612289-10612017 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 10, 161

Conread position: 328-512
Cow position: chr6:32419722-32419528 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 9

Conread position: 330-589
Cow position: chr6:3574232-3573972 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 188

Conread position: 330-589
Cow position: chr6:18987572-18987320 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 120, 28

Conread position: 332-589
Cow position: chr6:67173999-67173735 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 17

Conread position: 334-580
Cow position: chr6:17556231-17556480 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 35, 197

Conread position: 336-555
Cow position: chr6:10252643-10252420 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 42

Conread position: 337-542
Cow position: chr6:24045242-24045453 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 39

Conread position: 340-565
Cow position: chr6:17773422-17773191 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr6:6034363-6034617 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 108, 160

Conread position: 340-589
Cow position: chr6:6944511-6944762 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 340-589
Cow position: chr6:13314594-13314850 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 156

Conread position: 341-572
Cow position: chr6:47149532-47149774 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 197

Conread position: 342-580
Cow position: chr6:1109442-1109197 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 194

Conread position: 346-589
Cow position: chr6:43621161-43620911 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 190

Conread position: 349-589
Cow position: chr6:18962928-18963163 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 60

Conread position: 350-537
Cow position: chr6:24918200-24918388 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 140

Conread position: 350-589
Cow position: chr6:34843287-34843533 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 186

Conread position: 358-568
Cow position: chr6:52557233-52557447 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 127

Conread position: 366-589
Cow position: chr6:27939442-27939214 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 43

Conread position: 381-580
Cow position: chr6:25179791-25179992 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 114

Conread position: 389-589
Cow position: chr6:34405688-34405481 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 147

Conread position: 392-589
Cow position: chr6:51868370-51868169 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 42

Conread position: 397-589
Cow position: chr6:68030557-68030359 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 138

Conread position: 420-589
Cow position: chr6:11168861-11168687 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 447-580
Cow position: chr6:58016672-58016539 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 447-589
Cow position: chr6:49963629-49963772 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 83

Conread position: 2-503
Cow position: chr7:39530187-39530689 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 123

Conread position: 2-589
Cow position: chr7:21009319-21009894 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-414
Cow position: chr7:18508858-18509275 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-417
Cow position: chr7:64573464-64573877 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 284
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 151

Conread position: 3-424
Cow position: chr7:59245281-59244852 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 157

Conread position: 3-437
Cow position: chr7:31094750-31095206 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 3-507
Cow position: chr7:4520537-4520004 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 346
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 168, 202

Conread position: 3-516
Cow position: chr7:57184737-57185255 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 3-524
Cow position: chr7:53381855-53381338 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 14

Conread position: 3-555
Cow position: chr7:49750776-49750203 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-560
Cow position: chr7:18964559-18963989 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 3-560
Cow position: chr7:32277167-32276630 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 3-577
Cow position: chr7:20536957-20536365 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 3-578
Cow position: chr7:32283553-32282974 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-579
Cow position: chr7:26196155-26196748 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-580
Cow position: chr7:26838291-26837697 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 3-580
Cow position: chr7:29474277-29473723 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 161

Conread position: 3-580
Cow position: chr7:33810300-33809708 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 138

Conread position: 3-580
Cow position: chr7:34083313-34082710 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 148

Conread position: 3-581
Cow position: chr7:47909445-47910040 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 3-581
Cow position: chr7:56887134-56887730 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 3-581
Cow position: chr7:59713105-59712523 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 3-581
Cow position: chr7:61602174-61602741 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-581
Cow position: chr7:62793421-62792828 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-584
Cow position: chr7:47046091-47045508 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 40

Conread position: 3-589
Cow position: chr7:466721-467314 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 113

Conread position: 3-589
Cow position: chr7:535981-536583 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-589
Cow position: chr7:1366818-1367423 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr7:19881644-19882228 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 3-589
Cow position: chr7:21990519-21989914 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr7:23276635-23277225 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 127

Conread position: 3-589
Cow position: chr7:34489783-34489178 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr7:40318578-40317971 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-589
Cow position: chr7:46187889-46187293 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 3-589
Cow position: chr7:46749849-46749257 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr7:53070997-53070399 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-589
Cow position: chr7:57517511-57516921 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr7:58302308-58302902 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chr7:59558517-59559107 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 3-589
Cow position: chr7:61831618-61832222 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr7:62394653-62394056 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 3-589
Cow position: chr7:64103757-64104356 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 94

Conread position: 3-589
Cow position: chr7:64406181-64405583 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 4-569
Cow position: chr7:42840133-42839575 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 150

Conread position: 5-589
Cow position: chr7:42593673-42594271 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 6-443
Cow position: chr7:34538466-34538019 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 6-555
Cow position: chr7:57208969-57209537 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 109

Conread position: 9-397
Cow position: chr7:24767601-24768001 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 9-421
Cow position: chr7:57220803-57221218 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-436
Cow position: chr7:45748257-45748694 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 88

Conread position: 9-503
Cow position: chr7:60489625-60489137 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 9-561
Cow position: chr7:34425234-34424666 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-566
Cow position: chr7:4452233-4451661 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 147

Conread position: 9-572
Cow position: chr7:21849582-21850125 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 108

Conread position: 9-580
Cow position: chr7:38189474-38188891 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 9-580
Cow position: chr7:57911239-57910647 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 157

Conread position: 9-589
Cow position: chr7:845793-845193 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chr7:1330547-1331142 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 327

Conread position: 9-589
Cow position: chr7:1440966-1441564 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 277

Conread position: 9-589
Cow position: chr7:3159161-3158564 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 141

Conread position: 9-589
Cow position: chr7:7248895-7249494 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 9-589
Cow position: chr7:7262384-7261790 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:11460269-11460865 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 29

Conread position: 9-589
Cow position: chr7:14131979-14131380 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:20795610-20796199 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:22598886-22598287 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:23141423-23140824 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:26455385-26455971 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 138

Conread position: 9-589
Cow position: chr7:28622107-28621530 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:33308374-33308972 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 9-589
Cow position: chr7:34412656-34413263 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 9-589
Cow position: chr7:34548461-34547863 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:34819928-34819330 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 73

Conread position: 9-589
Cow position: chr7:37190535-37189938 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 9-589
Cow position: chr7:40203861-40203266 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr7:43109893-43110495 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 147

Conread position: 9-589
Cow position: chr7:46195781-46195184 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr7:53405232-53404660 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 9-589
Cow position: chr7:58138592-58137998 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 9-589
Cow position: chr7:63947251-63947844 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 146

Conread position: 10-418
Cow position: chr7:37454920-37454499 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 139

Conread position: 10-579
Cow position: chr7:5250300-5250883 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 10-580
Cow position: chr7:13855052-13854500 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 113

Conread position: 10-589
Cow position: chr7:63135689-63135117 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 64

Conread position: 11-507
Cow position: chr7:45721644-45721140 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 335
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 52

Conread position: 11-589
Cow position: chr7:25445018-25444417 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 12-512
Cow position: chr7:42334991-42334477 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 9

Conread position: 12-533
Cow position: chr7:18933951-18934479 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 12-589
Cow position: chr7:10070068-10070665 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 13-531
Cow position: chr7:65121985-65121459 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 13-540
Cow position: chr7:54478438-54478976 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 136

Conread position: 13-589
Cow position: chr7:50961940-50961349 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 104

Conread position: 13-589
Cow position: chr7:54186542-54187139 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-581
Cow position: chr7:58614435-58613852 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 133

Conread position: 17-589
Cow position: chr7:44597076-44597663 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 71

Conread position: 21-583
Cow position: chr7:60757351-60757934 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 306

Conread position: 21-587
Cow position: chr7:44621570-44622134 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 62

Conread position: 21-589
Cow position: chr7:44590231-44590799 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 21-589
Cow position: chr7:52167647-52167060 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 27-580
Cow position: chr7:43394185-43394736 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 27-589
Cow position: chr7:3027312-3027864 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 194

Conread position: 27-589
Cow position: chr7:16935133-16934575 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 53

Conread position: 27-589
Cow position: chr7:48011937-48011369 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 88

Conread position: 30-589
Cow position: chr7:25443617-25443045 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 33-521
Cow position: chr7:50734-51239 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 33-581
Cow position: chr7:62732829-62732255 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 114

Conread position: 45-589
Cow position: chr7:64013257-64012697 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 302

Conread position: 49-589
Cow position: chr7:49826514-49827088 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 50-452
Cow position: chr7:46799234-46799650 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 51-589
Cow position: chr7:548602-548046 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 96

Conread position: 53-487
Cow position: chr7:63771501-63771050 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 93

Conread position: 58-589
Cow position: chr7:23457199-23457742 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 58

Conread position: 69-373
Cow position: chr7:55707379-55707701 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 10

Conread position: 69-580
Cow position: chr7:49783924-49784435 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 77

Conread position: 73-589
Cow position: chr7:39401531-39401002 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 73

Conread position: 80-455
Cow position: chr7:3510693-3510321 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 83

Conread position: 80-493
Cow position: chr7:68529390-68528973 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 83-589
Cow position: chr7:58718895-58718382 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 89-580
Cow position: chr7:34152728-34152222 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 57

Conread position: 99-580
Cow position: chr7:21148211-21147713 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 66

Conread position: 106-491
Cow position: chr7:10727309-10727709 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 58

Conread position: 153-521
Cow position: chr7:34668892-34668520 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 157-589
Cow position: chr7:29303084-29303506 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 46

Conread position: 163-589
Cow position: chr7:48242909-48242472 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 190-587
Cow position: chr7:65496050-65496445 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 196-588
Cow position: chr7:18871338-18871735 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 56

Conread position: 207-448
Cow position: chr7:68867366-68867118 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 133

Conread position: 207-452
Cow position: chr7:39603021-39603265 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 123

Conread position: 207-516
Cow position: chr7:21571960-21571650 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 113

Conread position: 207-581
Cow position: chr7:13806000-13806367 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 102

Conread position: 207-584
Cow position: chr7:43238084-43238451 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 210-576
Cow position: chr7:33962731-33963093 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 89

Conread position: 211-456
Cow position: chr7:56080666-56080430 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 20

Conread position: 211-507
Cow position: chr7:48762511-48762812 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 129

Conread position: 211-512
Cow position: chr7:20036165-20036472 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 132

Conread position: 211-543
Cow position: chr7:49735426-49735096 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 159, 91

Conread position: 211-561
Cow position: chr7:68446462-68446112 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 201

Conread position: 211-569
Cow position: chr7:57538408-57538766 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 96

Conread position: 211-580
Cow position: chr7:40709404-40709034 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 46

Conread position: 211-580
Cow position: chr7:41463693-41463315 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 211-580
Cow position: chr7:51872822-51873199 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 119

Conread position: 211-581
Cow position: chr7:30306464-30306097 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 211-583
Cow position: chr7:23554610-23554244 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 29

Conread position: 211-585
Cow position: chr7:27473644-27474013 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 73

Conread position: 211-587
Cow position: chr7:64355673-64355288 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 113

Conread position: 211-589
Cow position: chr7:54494-54878 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr7:13237954-13238335 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 116

Conread position: 211-589
Cow position: chr7:19398540-19398924 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 259

Conread position: 211-589
Cow position: chr7:28162729-28162347 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 118

Conread position: 211-589
Cow position: chr7:38400484-38400122 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 130

Conread position: 211-589
Cow position: chr7:45928518-45928899 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 105

Conread position: 211-589
Cow position: chr7:48722425-48722811 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 87

Conread position: 211-589
Cow position: chr7:54482623-54483003 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 61

Conread position: 216-583
Cow position: chr7:35743206-35742836 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 121

Conread position: 217-472
Cow position: chr7:5175356-5175614 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 152, 99

Conread position: 217-537
Cow position: chr7:40186340-40186663 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 82, 315

Conread position: 217-559
Cow position: chr7:68575776-68575443 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 112

Conread position: 217-580
Cow position: chr7:63389639-63389274 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 37

Conread position: 217-581
Cow position: chr7:699154-698788 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 76

Conread position: 217-587
Cow position: chr7:41444642-41444296 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 232, 50

Conread position: 217-589
Cow position: chr7:14081549-14081922 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 218-587
Cow position: chr7:6667149-6666774 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 105

Conread position: 218-589
Cow position: chr7:3389160-3388802 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 61

Conread position: 218-589
Cow position: chr7:31878117-31877747 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 62

Conread position: 218-589
Cow position: chr7:33335097-33334720 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 219-589
Cow position: chr7:53037630-53038005 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 111

Conread position: 222-589
Cow position: chr7:37521120-37520750 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 224-578
Cow position: chr7:58921772-58921432 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 61

Conread position: 224-589
Cow position: chr7:998818-998465 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 24

Conread position: 227-589
Cow position: chr7:26885076-26884732 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 143, 65

Conread position: 231-584
Cow position: chr7:29346322-29346669 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 68

Conread position: 232-580
Cow position: chr7:53362570-53362911 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 78

Conread position: 234-589
Cow position: chr7:69065888-69065532 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 68

Conread position: 238-578
Cow position: chr7:5304357-5304702 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 104

Conread position: 239-502
Cow position: chr7:32792180-32791909 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 243-441
Cow position: chr7:27133307-27133496 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 37

Conread position: 244-517
Cow position: chr7:1353863-1354141 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 136

Conread position: 255-577
Cow position: chr7:43281883-43281548 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 84

Conread position: 258-589
Cow position: chr7:62991327-62990989 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 81

Conread position: 259-580
Cow position: chr7:19798853-19799181 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 262-589
Cow position: chr7:26926572-26926905 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 75

Conread position: 263-582
Cow position: chr7:59687585-59687272 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 39

Conread position: 265-589
Cow position: chr7:67802930-67802600 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 267-580
Cow position: chr7:33064740-33065048 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 60

Conread position: 270-475
Cow position: chr7:31869400-31869187 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 110

Conread position: 275-589
Cow position: chr7:42431220-42430908 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 42

Conread position: 280-461
Cow position: chr7:7175342-7175161 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 7

Conread position: 293-589
Cow position: chr7:51675503-51675206 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 77, 9

Conread position: 298-589
Cow position: chr7:60741372-60741668 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 18

Conread position: 302-589
Cow position: chr7:55688416-55688706 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 29

Conread position: 306-589
Cow position: chr7:56822163-56822448 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 319-587
Cow position: chr7:44455516-44455789 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 79

Conread position: 330-587
Cow position: chr7:37418518-37418256 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 144

Conread position: 331-523
Cow position: chr7:48274688-48274886 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 341-560
Cow position: chr7:65329915-65330135 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 39

Conread position: 347-586
Cow position: chr7:33068995-33069233 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 98

Conread position: 348-581
Cow position: chr7:51630518-51630282 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 195

Conread position: 349-580
Cow position: chr7:32713103-32713337 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 151

Conread position: 351-589
Cow position: chr7:19926349-19926591 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 103, 5

Conread position: 352-580
Cow position: chr7:259275-259502 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 19

Conread position: 355-588
Cow position: chr7:41727151-41726911 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 356-580
Cow position: chr7:59437276-59437053 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 144

Conread position: 358-589
Cow position: chr7:45100509-45100273 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 6

Conread position: 365-571
Cow position: chr7:65729520-65729309 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 170

Conread position: 373-589
Cow position: chr7:57161240-57161459 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 78, 122

Conread position: 391-589
Cow position: chr7:30275471-30275273 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 195, 63

Conread position: 392-589
Cow position: chr7:55041986-55041784 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 143

Conread position: 396-589
Cow position: chr7:19043750-19043949 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 406-589
Cow position: chr7:21567985-21568169 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 20

Conread position: 408-589
Cow position: chr7:62952784-62952602 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 144

Conread position: 420-589
Cow position: chr7:20167872-20167702 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 158

Conread position: 423-581
Cow position: chr7:19457185-19457341 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 456-589
Cow position: chr7:41747325-41747459 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 2-589
Cow position: chr8:21043655-21043048 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 2-589
Cow position: chr8:21152260-21152839 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 60

Conread position: 3-376
Cow position: chr8:18049209-18048831 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 206, 42

Conread position: 3-381
Cow position: chr8:57136214-57135827 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 3-466
Cow position: chr8:11136088-11136549 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 229

Conread position: 3-474
Cow position: chr8:13738053-13737572 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 95

Conread position: 3-502
Cow position: chr8:12779234-12779725 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 136

Conread position: 3-580
Cow position: chr8:1936372-1935780 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 3-580
Cow position: chr8:4690458-4689866 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr8:5021060-5020472 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-580
Cow position: chr8:7168014-7167423 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 47

Conread position: 3-580
Cow position: chr8:26625479-26624879 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 146

Conread position: 3-580
Cow position: chr8:35529732-35529145 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr8:45354448-45355025 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 3-580
Cow position: chr8:51702619-51702029 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 3-581
Cow position: chr8:8531514-8532094 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 3-581
Cow position: chr8:37535078-37534483 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 151

Conread position: 3-583
Cow position: chr8:1999234-1998645 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 3-583
Cow position: chr8:14933093-14933679 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 3-587
Cow position: chr8:24904901-24904306 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 46

Conread position: 3-588
Cow position: chr8:24868165-24868754 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 80

Conread position: 3-589
Cow position: chr8:8227347-8227945 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr8:8914784-8914181 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 45

Conread position: 3-589
Cow position: chr8:17488959-17489541 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 99

Conread position: 3-589
Cow position: chr8:18567848-18568445 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr8:19053345-19052740 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 149

Conread position: 3-589
Cow position: chr8:27955919-27956506 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 3-589
Cow position: chr8:31253407-31252810 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 3-589
Cow position: chr8:38596613-38597196 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 3-589
Cow position: chr8:45791677-45792273 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr8:49620499-49619896 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr8:49720741-49720127 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 326

Conread position: 3-589
Cow position: chr8:50927044-50927648 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr8:51675209-51674603 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 4-440
Cow position: chr8:40888588-40889021 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 4-589
Cow position: chr8:45070983-45070386 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 96

Conread position: 9-436
Cow position: chr8:19362235-19361792 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 9-468
Cow position: chr8:47679045-47678571 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 332

Conread position: 9-572
Cow position: chr8:28880453-28879873 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-579
Cow position: chr8:47751087-47751677 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 280

Conread position: 9-580
Cow position: chr8:27551627-27552216 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-581
Cow position: chr8:1107611-1108171 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 26

Conread position: 9-587
Cow position: chr8:19546397-19545802 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 132

Conread position: 9-588
Cow position: chr8:1499897-1500494 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-588
Cow position: chr8:21948221-21948803 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 9-588
Cow position: chr8:39739636-39740233 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:1111510-1110916 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 66

Conread position: 9-589
Cow position: chr8:1583524-1582930 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 9-589
Cow position: chr8:3332607-3333206 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:3957233-3956635 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:11241366-11240767 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:13830882-13831479 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-589
Cow position: chr8:13930887-13931482 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-589
Cow position: chr8:14302752-14302152 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 203

Conread position: 9-589
Cow position: chr8:25614327-25613728 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:35127744-35128339 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:35211563-35212145 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:40585123-40584524 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr8:41658758-41659354 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 29

Conread position: 9-589
Cow position: chr8:49600313-49600866 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 9-589
Cow position: chr8:53838984-53838388 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 9-589
Cow position: chr8:60067932-60067334 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-513
Cow position: chr8:46202870-46202355 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 135

Conread position: 11-574
Cow position: chr8:8902375-8902927 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 11-589
Cow position: chr8:20672587-20673199 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 137

Conread position: 12-580
Cow position: chr8:12795442-12794854 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 162

Conread position: 12-589
Cow position: chr8:983313-982717 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 48

Conread position: 12-589
Cow position: chr8:4727578-4728173 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr8:42117402-42116818 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 148

Conread position: 13-589
Cow position: chr8:6464098-6464693 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 13-589
Cow position: chr8:30418672-30418082 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 14-589
Cow position: chr8:18057331-18056737 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 16-523
Cow position: chr8:45245788-45246309 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 17-587
Cow position: chr8:45151611-45152198 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 20-589
Cow position: chr8:22031154-22030570 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 27-589
Cow position: chr8:17199983-17200557 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 41

Conread position: 27-589
Cow position: chr8:26394660-26394087 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 27-589
Cow position: chr8:42009995-42009398 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 108

Conread position: 27-589
Cow position: chr8:46962056-46961475 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 28-504
Cow position: chr8:16757828-16758297 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 134

Conread position: 30-589
Cow position: chr8:14259109-14258539 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 31-580
Cow position: chr8:11768728-11768152 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 279

Conread position: 32-542
Cow position: chr8:25498328-25497803 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 33-548
Cow position: chr8:38248913-38249446 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 127

Conread position: 35-575
Cow position: chr8:6076955-6077498 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 39-581
Cow position: chr8:52000346-51999810 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 358
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 10, 111

Conread position: 45-587
Cow position: chr8:25677516-25678076 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 110

Conread position: 50-384
Cow position: chr8:56581618-56581948 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 159, 54

Conread position: 55-428
Cow position: chr8:48756710-48757085 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 154, 80

Conread position: 56-522
Cow position: chr8:38394448-38393969 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 56-580
Cow position: chr8:33897914-33898453 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 90

Conread position: 69-569
Cow position: chr8:29919963-29920480 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 77

Conread position: 69-578
Cow position: chr8:46951647-46951145 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 73-589
Cow position: chr8:42749041-42748503 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 273

Conread position: 83-589
Cow position: chr8:16092784-16092284 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 63

Conread position: 87-549
Cow position: chr8:32303924-32303432 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 332
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 442

Conread position: 88-452
Cow position: chr8:2636668-2636293 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 58

Conread position: 88-589
Cow position: chr8:42442717-42442197 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 58

Conread position: 100-589
Cow position: chr8:53429364-53428848 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 49

Conread position: 117-577
Cow position: chr8:47995775-47996243 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 35

Conread position: 123-467
Cow position: chr8:8097491-8097851 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 23

Conread position: 125-367
Cow position: chr8:25078923-25078682 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 21

Conread position: 207-390
Cow position: chr8:30135025-30134845 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 122

Conread position: 207-447
Cow position: chr8:50936731-50936488 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 62

Conread position: 211-417
Cow position: chr8:4182634-4182433 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 74

Conread position: 211-449
Cow position: chr8:3291167-3291413 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 109

Conread position: 211-465
Cow position: chr8:32987339-32987589 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 158, 87

Conread position: 211-543
Cow position: chr8:3148020-3148349 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 130

Conread position: 211-560
Cow position: chr8:33585573-33585221 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 237, 85

Conread position: 211-560
Cow position: chr8:46645082-46645435 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 104, 129

Conread position: 211-581
Cow position: chr8:20674751-20675110 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 211-582
Cow position: chr8:18080797-18080429 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 56

Conread position: 211-589
Cow position: chr8:18683589-18683975 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 100

Conread position: 211-589
Cow position: chr8:19334428-19334044 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chr8:39141484-39141100 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 216-577
Cow position: chr8:8387369-8387009 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 46

Conread position: 216-589
Cow position: chr8:8469112-8468730 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 12

Conread position: 216-589
Cow position: chr8:24372610-24372987 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 221

Conread position: 216-589
Cow position: chr8:30483415-30483788 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 86

Conread position: 217-577
Cow position: chr8:49416077-49415716 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 94

Conread position: 217-589
Cow position: chr8:18991469-18991842 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 217-589
Cow position: chr8:43477370-43476992 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 240

Conread position: 218-589
Cow position: chr8:5243594-5243986 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 234

Conread position: 218-589
Cow position: chr8:26339089-26338709 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 80

Conread position: 218-589
Cow position: chr8:31976573-31976951 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 121

Conread position: 221-506
Cow position: chr8:6470829-6470540 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 60

Conread position: 223-589
Cow position: chr8:46106224-46105868 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 33

Conread position: 232-578
Cow position: chr8:13322360-13322719 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 108

Conread position: 232-583
Cow position: chr8:34400332-34400004 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 141, 20

Conread position: 234-589
Cow position: chr8:29030880-29031225 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 62

Conread position: 240-589
Cow position: chr8:50948799-50949161 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 126

Conread position: 249-536
Cow position: chr8:19868856-19868571 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 53

Conread position: 249-587
Cow position: chr8:4923700-4923360 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 53

Conread position: 257-589
Cow position: chr8:26014058-26013728 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 45

Conread position: 259-588
Cow position: chr8:12806544-12806222 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 190

Conread position: 260-589
Cow position: chr8:2889485-2889154 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 56, 6

Conread position: 263-588
Cow position: chr8:13696231-13696555 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 69

Conread position: 266-449
Cow position: chr8:1010043-1009859 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 71

Conread position: 266-580
Cow position: chr8:46057988-46058299 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 71, 36

Conread position: 267-581
Cow position: chr8:38710522-38710846 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 81

Conread position: 269-584
Cow position: chr8:18402539-18402859 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 276-589
Cow position: chr8:58856451-58856130 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 199

Conread position: 288-580
Cow position: chr8:43902927-43902633 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 52

Conread position: 291-580
Cow position: chr8:1115510-1115795 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 7

Conread position: 303-580
Cow position: chr8:7598244-7597961 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 66, 20

Conread position: 306-542
Cow position: chr8:52862719-52862487 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 142, 17

Conread position: 317-521
Cow position: chr8:55358666-55358462 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 13

Conread position: 323-589
Cow position: chr8:6330425-6330147 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 149

Conread position: 330-580
Cow position: chr8:25342909-25342663 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 50

Conread position: 330-581
Cow position: chr8:42159350-42159091 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 208

Conread position: 337-580
Cow position: chr8:42427881-42428127 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 53

Conread position: 338-588
Cow position: chr8:39165690-39165946 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 91

Conread position: 340-589
Cow position: chr8:1150585-1150837 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 114, 30

Conread position: 340-589
Cow position: chr8:8010104-8009848 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 31, 202

Conread position: 340-589
Cow position: chr8:17268152-17268398 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 155

Conread position: 340-589
Cow position: chr8:24231153-24230906 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 110

Conread position: 347-588
Cow position: chr8:21225141-21224904 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 45

Conread position: 357-506
Cow position: chr8:11566855-11566704 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 135

Conread position: 358-589
Cow position: chr8:12287627-12287391 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 96, 6

Conread position: 389-589
Cow position: chr8:47485491-47485691 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 72

Conread position: 391-580
Cow position: chr8:44703471-44703283 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 14

Conread position: 391-589
Cow position: chr8:13373779-13373576 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 75

Conread position: 395-589
Cow position: chr8:53821729-53821529 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 140

Conread position: 398-580
Cow position: chr8:25414265-25414077 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 138

Conread position: 403-589
Cow position: chr8:47889456-47889265 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 132

Conread position: 406-589
Cow position: chr8:49841669-49841480 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 129

Conread position: 444-587
Cow position: chr8:3291549-3291694 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 447-576
Cow position: chr8:8160659-8160530 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 102, 83

Conread position: 447-580
Cow position: chr8:4745709-4745843 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 83

Conread position: 448-583
Cow position: chr8:50936273-50936137 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 80

Conread position: 454-580
Cow position: chr8:53981200-53981074 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-587
Cow position: chr9:59541140-59540554 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 2-589
Cow position: chr9:34568352-34567757 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 3-417
Cow position: chr9:25469446-25469885 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 163

Conread position: 3-443
Cow position: chr9:29184703-29184252 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-502
Cow position: chr9:48374450-48374953 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 182

Conread position: 3-527
Cow position: chr9:27050859-27050316 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 3-542
Cow position: chr9:9889845-9889289 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 357
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 140, 208

Conread position: 3-552
Cow position: chr9:20900681-20900121 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-568
Cow position: chr9:20989008-20988426 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 3-580
Cow position: chr9:59197559-59196975 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 3-581
Cow position: chr9:31811285-31810695 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-583
Cow position: chr9:28025534-28024934 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-587
Cow position: chr9:17634196-17633598 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 76

Conread position: 3-587
Cow position: chr9:23028330-23028919 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 3-588
Cow position: chr9:5628532-5627929 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr9:1520295-1519701 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-589
Cow position: chr9:3959490-3960074 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 34

Conread position: 3-589
Cow position: chr9:5327654-5328245 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 3-589
Cow position: chr9:7006453-7005850 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chr9:9016785-9016183 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 100

Conread position: 3-589
Cow position: chr9:9957478-9958075 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 3-589
Cow position: chr9:18072193-18071591 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 3-589
Cow position: chr9:23541010-23540439 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 3-589
Cow position: chr9:24726245-24725709 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr9:24917576-24918179 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 3-589
Cow position: chr9:27038827-27038216 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-589
Cow position: chr9:27781198-27781803 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-589
Cow position: chr9:29338602-29338015 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 163

Conread position: 3-589
Cow position: chr9:30675783-30675184 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 135

Conread position: 3-589
Cow position: chr9:34901174-34900576 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 53

Conread position: 3-589
Cow position: chr9:46670632-46670040 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 89

Conread position: 3-589
Cow position: chr9:47171767-47171162 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chr9:51011221-51010670 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 3-589
Cow position: chr9:52407595-52408219 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 5-521
Cow position: chr9:44517996-44518519 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 158

Conread position: 5-584
Cow position: chr9:23422294-23421701 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 5-589
Cow position: chr9:24997063-24996482 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 6-589
Cow position: chr9:6979908-6979311 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 37

Conread position: 9-479
Cow position: chr9:3311994-3311519 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 342

Conread position: 9-561
Cow position: chr9:62400606-62401183 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 9-568
Cow position: chr9:3388130-3388693 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 100

Conread position: 9-570
Cow position: chr9:12379153-12378577 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-578
Cow position: chr9:58674195-58674787 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 339

Conread position: 9-580
Cow position: chr9:1984066-1983490 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-580
Cow position: chr9:22802954-22803532 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:13181617-13181028 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 9-589
Cow position: chr9:26326453-26325855 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:37173697-37174296 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:37254112-37253513 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:37908556-37907956 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:43494756-43494157 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chr9:45877226-45876627 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chr9:62668844-62669441 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 10-531
Cow position: chr9:35592431-35592973 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 10-580
Cow position: chr9:52001400-52001991 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 112

Conread position: 10-589
Cow position: chr9:30401976-30401391 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 115

Conread position: 11-455
Cow position: chr9:7843973-7844440 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 11-589
Cow position: chr9:1405495-1404918 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 37

Conread position: 11-589
Cow position: chr9:59432207-59431610 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 12-583
Cow position: chr9:3807297-3806710 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-583
Cow position: chr9:15215218-15214651 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 12-588
Cow position: chr9:26087304-26087892 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 216

Conread position: 12-589
Cow position: chr9:1100289-1099703 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr9:3997068-3997651 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr9:4939789-4940390 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chr9:12162305-12161704 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 145

Conread position: 12-589
Cow position: chr9:33844025-33843432 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 37

Conread position: 13-580
Cow position: chr9:14046367-14045795 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 13-582
Cow position: chr9:1938364-1938918 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 13-588
Cow position: chr9:54996328-54995745 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 17-589
Cow position: chr9:40316821-40316245 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 20-589
Cow position: chr9:22570800-22570214 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 27-508
Cow position: chr9:51556659-51556158 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 27-589
Cow position: chr9:1306660-1307243 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 27-589
Cow position: chr9:4673745-4673164 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 33-589
Cow position: chr9:64025161-64025721 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 34-427
Cow position: chr9:15950341-15949972 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 122

Conread position: 35-580
Cow position: chr9:34918287-34917738 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 111

Conread position: 35-580
Cow position: chr9:37169142-37168587 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 117

Conread position: 38-417
Cow position: chr9:26478025-26478415 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 54

Conread position: 38-589
Cow position: chr9:5533257-5533822 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 108

Conread position: 38-589
Cow position: chr9:15052221-15052780 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 284

Conread position: 51-572
Cow position: chr9:29192909-29193441 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 254

Conread position: 51-589
Cow position: chr9:34689869-34690421 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 95

Conread position: 56-589
Cow position: chr9:33845660-33845127 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 109

Conread position: 63-589
Cow position: chr9:64562839-64562320 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 38

Conread position: 68-587
Cow position: chr9:18110349-18109814 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 84

Conread position: 75-589
Cow position: chr9:5007606-5007082 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 71

Conread position: 76-589
Cow position: chr9:5431106-5430575 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 80-589
Cow position: chr9:44516197-44516703 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 339
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 88, 162

Conread position: 88-589
Cow position: chr9:18711120-18710602 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 253

Conread position: 91-432
Cow position: chr9:63966656-63967008 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 74

Conread position: 98-589
Cow position: chr9:56861563-56862056 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 15

Conread position: 99-589
Cow position: chr9:3411283-3411785 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 125-589
Cow position: chr9:9516250-9515780 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 153-542
Cow position: chr9:59761183-59760784 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 207-441
Cow position: chr9:2287701-2287934 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 107

Conread position: 211-375
Cow position: chr9:61023462-61023627 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 127

Conread position: 211-437
Cow position: chr9:25959183-25959406 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 91

Conread position: 211-442
Cow position: chr9:33123987-33124216 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 33

Conread position: 211-456
Cow position: chr9:44107551-44107320 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 211-476
Cow position: chr9:39696950-39697217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 96, 126

Conread position: 211-580
Cow position: chr9:5524868-5525221 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 40

Conread position: 211-580
Cow position: chr9:30139121-30139492 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 49

Conread position: 211-584
Cow position: chr9:26577183-26576816 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 211-585
Cow position: chr9:29106368-29105989 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 129

Conread position: 211-587
Cow position: chr9:33068001-33068389 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 91

Conread position: 211-589
Cow position: chr9:13493222-13492865 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 159, 56

Conread position: 211-589
Cow position: chr9:21461947-21461575 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 73

Conread position: 211-589
Cow position: chr9:38547067-38547435 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 211-589
Cow position: chr9:43496627-43496243 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chr9:49981990-49981612 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 211-589
Cow position: chr9:51692138-51692511 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 26

Conread position: 211-589
Cow position: chr9:59539394-59539019 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 118

Conread position: 212-512
Cow position: chr9:17307299-17306995 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 128

Conread position: 212-562
Cow position: chr9:33999724-33999374 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 60

Conread position: 213-589
Cow position: chr9:50840923-50840541 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 110

Conread position: 215-533
Cow position: chr9:23043791-23044098 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 216-514
Cow position: chr9:49151142-49151439 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 28

Conread position: 216-589
Cow position: chr9:15982189-15981812 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 16

Conread position: 232-589
Cow position: chr9:25547668-25548045 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 235-557
Cow position: chr9:18008068-18007739 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 196

Conread position: 236-522
Cow position: chr9:1740092-1740382 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 241-589
Cow position: chr9:2873938-2873583 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 242-589
Cow position: chr9:1850199-1850534 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 244-589
Cow position: chr9:53777148-53776802 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 27

Conread position: 254-568
Cow position: chr9:13220992-13220667 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 255-580
Cow position: chr9:29300582-29300892 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 43

Conread position: 255-589
Cow position: chr9:10678487-10678820 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 47

Conread position: 261-589
Cow position: chr9:52526594-52526260 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 266-540
Cow position: chr9:20409801-20409529 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 62

Conread position: 272-589
Cow position: chr9:9623362-9623047 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 44

Conread position: 284-588
Cow position: chr9:3546236-3545937 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 18

Conread position: 330-580
Cow position: chr9:2214515-2214258 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 67

Conread position: 330-589
Cow position: chr9:44168967-44168698 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 144

Conread position: 334-504
Cow position: chr9:33478262-33478086 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 337-581
Cow position: chr9:1259804-1259551 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 337-589
Cow position: chr9:33057150-33056891 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 199

Conread position: 340-589
Cow position: chr9:9210508-9210252 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chr9:44821249-44820994 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 32, 155

Conread position: 345-587
Cow position: chr9:10671980-10672224 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 354-586
Cow position: chr9:9199441-9199209 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 120

Conread position: 369-575
Cow position: chr9:29826155-29826355 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 119

Conread position: 394-572
Cow position: chr9:22319106-22319288 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 394-589
Cow position: chr9:388716-388514 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 396-589
Cow position: chr9:43856231-43856429 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 403-589
Cow position: chr9:9872240-9872048 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 132

Conread position: 440-589
Cow position: chr9:44920495-44920344 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 447-589
Cow position: chr9:15802651-15802508 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 447-589
Cow position: chr9:17588389-17588247 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 134, 43

Conread position: 452-580
Cow position: chr9:23527005-23526875 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 471-580
Cow position: chr9:9415184-9415075 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 55

Conread position: 2-441
Cow position: chrX:2185852-2185419 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 59

Conread position: 2-561
Cow position: chrX:16020762-16021329 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 115

Conread position: 2-581
Cow position: chrX:10412349-10412949 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 114

Conread position: 2-589
Cow position: chrX:5391952-5392558 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 2-589
Cow position: chrX:12179298-12178691 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 146

Conread position: 2-589
Cow position: chrX:15139926-15140514 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 144

Conread position: 2-589
Cow position: chrX:34441824-34442411 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 3-448
Cow position: chrX:11082992-11083442 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 47

Conread position: 3-493
Cow position: chrX:35388285-35388805 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 3-507
Cow position: chrX:13912715-13912193 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 3-512
Cow position: chrX:11855791-11855260 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-521
Cow position: chrX:7805998-7805467 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-567
Cow position: chrX:35240486-35239912 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-575
Cow position: chrX:4750751-4751330 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 152

Conread position: 3-577
Cow position: chrX:45400418-45400988 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 3-579
Cow position: chrX:37831852-37832426 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 91

Conread position: 3-580
Cow position: chrX:10866245-10866834 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-580
Cow position: chrX:23038375-23038957 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chrX:30228488-30229086 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 148

Conread position: 3-580
Cow position: chrX:40224621-40225207 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 146

Conread position: 3-581
Cow position: chrX:6406967-6406381 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 3-581
Cow position: chrX:22329954-22330524 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 380
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 42, 115

Conread position: 3-583
Cow position: chrX:21592908-21592316 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 143

Conread position: 3-587
Cow position: chrX:39939132-39939733 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 254

Conread position: 3-588
Cow position: chrX:19930049-19929455 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 3-588
Cow position: chrX:20801393-20800807 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 84

Conread position: 3-589
Cow position: chrX:1550572-1549982 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 162

Conread position: 3-589
Cow position: chrX:2383084-2382483 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 58

Conread position: 3-589
Cow position: chrX:4482573-4481984 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 3-589
Cow position: chrX:10440220-10440814 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 85

Conread position: 3-589
Cow position: chrX:11073589-11074166 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 65

Conread position: 3-589
Cow position: chrX:16046770-16046165 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-589
Cow position: chrX:17055191-17054585 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:18194312-18193707 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:21227096-21226496 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:23396228-23395624 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 3-589
Cow position: chrX:26531580-26530990 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 3-589
Cow position: chrX:30060510-30059904 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:31261015-31261616 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 152

Conread position: 3-589
Cow position: chrX:35533473-35532872 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-589
Cow position: chrX:38151310-38150706 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-589
Cow position: chrX:38331004-38330401 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:38852781-38852180 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 3-589
Cow position: chrX:39185795-39185190 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-589
Cow position: chrX:39352033-39352593 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 3-589
Cow position: chrX:39558745-39559336 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 96

Conread position: 3-589
Cow position: chrX:40495979-40496564 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 91

Conread position: 3-589
Cow position: chrX:44192820-44193419 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 3-589
Cow position: chrX:44873912-44874483 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 144

Conread position: 4-587
Cow position: chrX:33803400-33803967 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 4-589
Cow position: chrX:41733575-41734166 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 5-589
Cow position: chrX:2648742-2649333 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 5-589
Cow position: chrX:6766124-6766717 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 152

Conread position: 5-589
Cow position: chrX:44054424-44053833 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 146

Conread position: 6-432
Cow position: chrX:42010653-42010229 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 150

Conread position: 6-589
Cow position: chrX:28624140-28624743 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 9-488
Cow position: chrX:17265436-17265916 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 64

Conread position: 9-500
Cow position: chrX:37816204-37815699 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 119

Conread position: 9-524
Cow position: chrX:2524119-2524649 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-578
Cow position: chrX:16040064-16040650 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-579
Cow position: chrX:29942765-29942187 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 137

Conread position: 9-580
Cow position: chrX:323531-322941 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chrX:16465916-16465334 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chrX:16711570-16710983 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 137

Conread position: 9-580
Cow position: chrX:28157149-28156567 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 55

Conread position: 9-580
Cow position: chrX:30180310-30180897 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-581
Cow position: chrX:16703286-16702697 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-581
Cow position: chrX:20954142-20953559 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 43

Conread position: 9-587
Cow position: chrX:9011943-9011350 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-587
Cow position: chrX:14598462-14597865 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:671393-671976 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 9-589
Cow position: chrX:1055777-1056370 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 9-589
Cow position: chrX:2048719-2048129 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 9-589
Cow position: chrX:3361437-3360838 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:3417523-3418119 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 119

Conread position: 9-589
Cow position: chrX:4622338-4622936 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:5280237-5280835 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 9-589
Cow position: chrX:5334203-5334796 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chrX:6454311-6453714 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 9-589
Cow position: chrX:8641404-8640805 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chrX:9168998-9169588 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 328

Conread position: 9-589
Cow position: chrX:9641816-9642415 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:9898726-9899319 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 9-589
Cow position: chrX:11145722-11146316 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 137

Conread position: 9-589
Cow position: chrX:12145711-12145116 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 106

Conread position: 9-589
Cow position: chrX:14801202-14801801 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 9-589
Cow position: chrX:16808220-16808797 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 9-589
Cow position: chrX:16853773-16854348 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chrX:17995075-17994479 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:19399394-19398795 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:20021193-20020598 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-589
Cow position: chrX:21344010-21343412 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 258

Conread position: 9-589
Cow position: chrX:21686236-21685636 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-589
Cow position: chrX:21768420-21767817 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:22125250-22125838 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 148

Conread position: 9-589
Cow position: chrX:22811502-22810907 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:23986864-23986267 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 9-589
Cow position: chrX:24413646-24413044 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:27759323-27758726 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:27982754-27983334 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 394
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 110

Conread position: 9-589
Cow position: chrX:28503952-28503353 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chrX:28518107-28518703 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 39

Conread position: 9-589
Cow position: chrX:28632861-28633437 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 9-589
Cow position: chrX:28752724-28753319 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:29083695-29083084 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-589
Cow position: chrX:29849015-29849606 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-589
Cow position: chrX:29912955-29912358 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:30172094-30172689 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 29

Conread position: 9-589
Cow position: chrX:31496352-31495754 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:35609602-35609011 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:36730000-36729401 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:38230651-38231250 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 333

Conread position: 9-589
Cow position: chrX:39560036-39560642 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-589
Cow position: chrX:41846918-41847512 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-589
Cow position: chrX:42733482-42732889 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 9-589
Cow position: chrX:46297276-46296679 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 11-368
Cow position: chrX:45043172-45042791 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 135

Conread position: 11-472
Cow position: chrX:12094971-12095451 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 12-478
Cow position: chrX:8103693-8104152 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 12-566
Cow position: chrX:15114284-15113713 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 12-584
Cow position: chrX:5353690-5354279 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chrX:16279262-16278673 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 84

Conread position: 12-589
Cow position: chrX:21255389-21254796 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-589
Cow position: chrX:39714164-39713568 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 324

Conread position: 13-580
Cow position: chrX:16782892-16782307 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 13-581
Cow position: chrX:7277544-7276987 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 133

Conread position: 13-586
Cow position: chrX:47000041-47000632 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 15-454
Cow position: chrX:161038-160589 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 141

Conread position: 15-589
Cow position: chrX:19473550-19474131 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 132

Conread position: 16-484
Cow position: chrX:30421538-30422012 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 132

Conread position: 27-580
Cow position: chrX:21583040-21582470 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 120

Conread position: 27-581
Cow position: chrX:28879008-28879555 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 27-589
Cow position: chrX:2500034-2500613 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 46

Conread position: 27-589
Cow position: chrX:5331839-5332414 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 120

Conread position: 27-589
Cow position: chrX:30089454-30090025 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 93

Conread position: 27-589
Cow position: chrX:40693142-40693715 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 28-587
Cow position: chrX:2300477-2299906 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 28-589
Cow position: chrX:11744863-11744287 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 29-589
Cow position: chrX:32584339-32584913 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 15

Conread position: 30-589
Cow position: chrX:14049599-14050176 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 39-566
Cow position: chrX:1616653-1617193 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 72

Conread position: 39-580
Cow position: chrX:22578804-22579360 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 107

Conread position: 42-377
Cow position: chrX:10146085-10146436 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 168, 104

Conread position: 45-562
Cow position: chrX:41526932-41527464 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 108

Conread position: 45-588
Cow position: chrX:25451901-25451356 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 65

Conread position: 45-589
Cow position: chrX:27616383-27615831 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 102

Conread position: 49-583
Cow position: chrX:26441685-26442227 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 97

Conread position: 50-476
Cow position: chrX:16688842-16688399 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 96

Conread position: 58-589
Cow position: chrX:24292113-24292646 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 88

Conread position: 59-589
Cow position: chrX:36840268-36839729 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 96

Conread position: 69-580
Cow position: chrX:28133665-28133127 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 32

Conread position: 80-569
Cow position: chrX:19880535-19880040 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 327
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 120, 55

Conread position: 87-589
Cow position: chrX:27318768-27318248 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 104-589
Cow position: chrX:32644006-32643503 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 192-438
Cow position: chrX:11613928-11613678 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 19

Conread position: 192-580
Cow position: chrX:29099836-29099444 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 109

Conread position: 207-586
Cow position: chrX:2008304-2008678 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 96

Conread position: 207-589
Cow position: chrX:32144862-32145238 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 96

Conread position: 210-481
Cow position: chrX:37885938-37886208 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 35

Conread position: 211-455
Cow position: chrX:40788535-40788292 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 91

Conread position: 211-504
Cow position: chrX:25848202-25847904 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 129

Conread position: 211-572
Cow position: chrX:23415294-23415660 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 211-576
Cow position: chrX:24280304-24279951 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 240, 29

Conread position: 211-581
Cow position: chrX:27754830-27754454 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 111

Conread position: 211-588
Cow position: chrX:13031262-13031632 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 48

Conread position: 211-589
Cow position: chrX:10059866-10059482 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-589
Cow position: chrX:12307356-12307745 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 211-589
Cow position: chrX:12465433-12465055 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chrX:19609077-19608692 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 211-589
Cow position: chrX:21063872-21063492 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-589
Cow position: chrX:23572415-23572800 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 129

Conread position: 211-589
Cow position: chrX:24588335-24588717 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 211-589
Cow position: chrX:27450659-27451028 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 211-589
Cow position: chrX:29700552-29700924 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 58

Conread position: 211-589
Cow position: chrX:38227910-38228300 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 131

Conread position: 211-589
Cow position: chrX:39548800-39548416 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 212-511
Cow position: chrX:47992768-47992460 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 127

Conread position: 212-580
Cow position: chrX:40070210-40070576 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 124

Conread position: 212-589
Cow position: chrX:14124846-14125227 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 111

Conread position: 212-589
Cow position: chrX:24826404-24826025 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 121

Conread position: 213-581
Cow position: chrX:21415266-21414893 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 127

Conread position: 213-588
Cow position: chrX:16035114-16035490 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 258

Conread position: 216-581
Cow position: chrX:16325133-16325503 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 123

Conread position: 217-580
Cow position: chrX:41791317-41791689 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 341

Conread position: 217-581
Cow position: chrX:21389973-21389604 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 217-581
Cow position: chrX:29892484-29892113 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 115

Conread position: 217-589
Cow position: chrX:21793986-21793607 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 106

Conread position: 217-589
Cow position: chrX:29915951-29916329 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 217-589
Cow position: chrX:35024450-35024086 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 80

Conread position: 218-506
Cow position: chrX:25204729-25204437 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 219-569
Cow position: chrX:26508615-26508268 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 108

Conread position: 219-589
Cow position: chrX:8482832-8482464 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 91

Conread position: 221-417
Cow position: chrX:27446066-27445872 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 46

Conread position: 230-589
Cow position: chrX:28557734-28557383 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 139, 62

Conread position: 231-589
Cow position: chrX:13178226-13178590 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 92

Conread position: 232-431
Cow position: chrX:16517752-16517951 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 83, 108

Conread position: 234-589
Cow position: chrX:32063793-32064151 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 89

Conread position: 237-581
Cow position: chrX:30134964-30135316 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 83

Conread position: 237-589
Cow position: chrX:33685506-33685148 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 239-572
Cow position: chrX:35937708-35938040 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 242-580
Cow position: chrX:26447449-26447119 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 255-589
Cow position: chrX:619902-620247 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 255-589
Cow position: chrX:24169960-24170296 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 180, 80

Conread position: 261-580
Cow position: chrX:21818130-21818431 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 39

Conread position: 261-580
Cow position: chrX:25573695-25573379 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 111, 61

Conread position: 263-588
Cow position: chrX:21662385-21662060 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 267-589
Cow position: chrX:38218329-38217997 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 304

Conread position: 270-587
Cow position: chrX:35287781-35287446 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 164

Conread position: 298-468
Cow position: chrX:25360363-25360190 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 30

Conread position: 306-581
Cow position: chrX:21626390-21626672 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 13

Conread position: 309-589
Cow position: chrX:22819383-22819097 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 280

Conread position: 310-568
Cow position: chrX:29766305-29766040 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 189

Conread position: 311-589
Cow position: chrX:17889559-17889836 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 40

Conread position: 313-589
Cow position: chrX:4407182-4406900 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 23

Conread position: 316-580
Cow position: chrX:25817527-25817790 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 23

Conread position: 317-587
Cow position: chrX:33537871-33537603 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 52, 103

Conread position: 318-589
Cow position: chrX:27071140-27070863 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 149

Conread position: 319-584
Cow position: chrX:28646978-28647247 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 18

Conread position: 319-589
Cow position: chrX:29288286-29288015 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 50, 16

Conread position: 330-572
Cow position: chrX:20790258-20790505 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 40, 15

Conread position: 330-579
Cow position: chrX:34564374-34564137 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 30

Conread position: 330-580
Cow position: chrX:4767975-4767723 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 121

Conread position: 330-581
Cow position: chrX:3144911-3144655 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 123, 0

Conread position: 330-581
Cow position: chrX:12651537-12651794 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 330-581
Cow position: chrX:24317104-24316848 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 6

Conread position: 330-589
Cow position: chrX:7485091-7484824 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 207

Conread position: 330-589
Cow position: chrX:20675151-20674885 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 40, 206

Conread position: 330-589
Cow position: chrX:45373825-45374090 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 200

Conread position: 333-570
Cow position: chrX:23221765-23222005 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 35

Conread position: 337-589
Cow position: chrX:32329483-32329226 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 158

Conread position: 340-587
Cow position: chrX:3155312-3155562 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 240

Conread position: 340-589
Cow position: chrX:24346322-24346066 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chrX:33763418-33763162 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 196

Conread position: 340-589
Cow position: chrX:40184345-40184090 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 5

Conread position: 353-589
Cow position: chrX:43075141-43074900 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 105, 11

Conread position: 354-560
Cow position: chrX:6201786-6201577 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 97

Conread position: 355-587
Cow position: chrX:41884921-41885158 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 49

Conread position: 359-589
Cow position: chrX:6655782-6656001 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 74

Conread position: 373-566
Cow position: chrX:17794090-17793896 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 126

Conread position: 392-565
Cow position: chrX:3827887-3827709 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 137

Conread position: 392-589
Cow position: chrX:7120827-7120624 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 143

Conread position: 392-589
Cow position: chrX:16803647-16803850 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 143

Conread position: 401-589
Cow position: chrX:38999042-38998858 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 26

Conread position: 403-589
Cow position: chrX:5375068-5375260 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 132

Conread position: 429-588
Cow position: chrX:6854540-6854700 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 0

Conread position: 447-588
Cow position: chrX:21750085-21750224 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 78

Conread position: 447-589
Cow position: chrX:12996750-12996893 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 447-589
Cow position: chrX:29047275-29047132 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 452-589
Cow position: chrX:20742008-20741870 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 78