Cow genome map
| Conread name: | rcbl0_023093.y1 |
| Conread position: | 43-322 |
| Cow position: | chr1:61226149-61226433 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 161 |
| Conread position: | 45-329 |
| Cow position: | chr1:64834090-64833813 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 40-278 |
| Cow position: | chr10:58664409-58664658 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 45-281 |
| Cow position: | chr10:276427-276674 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 228 |
| Conread position: | 52-346 |
| Cow position: | chr10:47063261-47063559 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 88-406 |
| Cow position: | chr10:19215310-19215643 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 120-375 |
| Cow position: | chr10:51215264-51215524 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 32-363 |
| Cow position: | chr11:3891807-3891465 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 33-337 |
| Cow position: | chr11:9581082-9580764 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 43-259 |
| Cow position: | chr11:30304719-30304935 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 64-375 |
| Cow position: | chr11:2909447-2909137 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 68-414 |
| Cow position: | chr11:34750219-34750591 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 69-281 |
| Cow position: | chr11:29234153-29233935 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 90-348 |
| Cow position: | chr11:28073247-28073512 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 43-329 |
| Cow position: | chr12:45261371-45261668 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 83, 231 |
| Conread position: | 43-348 |
| Cow position: | chr12:17128555-17128251 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 52-375 |
| Cow position: | chr12:17617132-17616804 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 165-375 |
| Cow position: | chr12:42805844-42806052 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 45-372 |
| Cow position: | chr13:17054062-17053730 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 47-272 |
| Cow position: | chr13:4531470-4531236 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 70-361 |
| Cow position: | chr13:49554022-49554325 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 71-329 |
| Cow position: | chr13:41527147-41526892 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 104-408 |
| Cow position: | chr13:19615874-19615555 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 24, 156 |
| Conread position: | 61-329 |
| Cow position: | chr14:44421987-44422261 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 98 |
| Conread position: | 52-414 |
| Cow position: | chr15:20396848-20397213 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 68-374 |
| Cow position: | chr15:7969567-7969250 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 105-388 |
| Cow position: | chr15:12265094-12264806 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 166 |
| Conread position: | 145-337 |
| Cow position: | chr16:55347570-55347765 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 43-414 |
| Cow position: | chr17:35975257-35974891 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 152 |
| Conread position: | 61-327 |
| Cow position: | chr17:16889786-16890056 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 80-368 |
| Cow position: | chr17:12780937-12780648 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 43-329 |
| Cow position: | chr18:48221728-48222026 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 69-375 |
| Cow position: | chr18:48452413-48452728 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 223 |
| Conread position: | 80-414 |
| Cow position: | chr18:29955132-29955475 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 37-244 |
| Cow position: | chr19:14240720-14240938 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 43-329 |
| Cow position: | chr19:32665388-32665681 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 227 |
| Conread position: | 43-414 |
| Cow position: | chr19:30743976-30744358 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 44-329 |
| Cow position: | chr19:29209417-29209710 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 225 |
| Conread position: | 39-374 |
| Cow position: | chr2:34565633-34565287 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 246 |
| Conread position: | 159-413 |
| Cow position: | chr2:11399337-11399069 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 43-332 |
| Cow position: | chr21:2716750-2716453 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 123 |
| Conread position: | 43-373 |
| Cow position: | chr21:35596300-35596643 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 45-393 |
| Cow position: | chr21:4133436-4133085 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 52-266 |
| Cow position: | chr21:3415355-3415571 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 43-329 |
| Cow position: | chr22:1319154-1319451 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 231 |
| Conread position: | 92-414 |
| Cow position: | chr22:33480621-33480283 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 44-413 |
| Cow position: | chr24:802242-801867 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 43-373 |
| Cow position: | chr25:34656644-34656302 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 224 |
| Conread position: | 58-414 |
| Cow position: | chr25:28030802-28030425 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 112 |
| Conread position: | 56-335 |
| Cow position: | chr26:30213967-30214252 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 108-375 |
| Cow position: | chr28:34354259-34354535 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 43-318 |
| Cow position: | chr29:24526674-24526389 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 43-414 |
| Cow position: | chr3:16058317-16057941 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 45-409 |
| Cow position: | chr3:15088966-15089342 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 167 |
| Conread position: | 61-414 |
| Cow position: | chr3:12766948-12767314 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 103 |
| Conread position: | 65-329 |
| Cow position: | chr3:66638448-66638722 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 208 |
| Conread position: | 66-368 |
| Cow position: | chr3:47189324-47189642 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 43-373 |
| Cow position: | chr4:66179495-66179153 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 43-375 |
| Cow position: | chr4:12715479-12715819 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 44-329 |
| Cow position: | chr4:66925496-66925786 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 224 |
| Conread position: | 45-414 |
| Cow position: | chr4:45111737-45111345 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 198 |
| Conread position: | 23-413 |
| Cow position: | chr5:69620369-69620773 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 32-375 |
| Cow position: | chr5:26054341-26054689 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 219 |
| Conread position: | 78-336 |
| Cow position: | chr5:62761611-62761875 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 95-338 |
| Cow position: | chr5:21148283-21148045 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 45-409 |
| Cow position: | chr6:47953557-47953184 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 27-375 |
| Cow position: | chr7:27543313-27542962 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 43-254 |
| Cow position: | chr7:24333305-24333523 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 56-348 |
| Cow position: | chr8:46612117-46612416 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 191 |
| Conread position: | 16-375 |
| Cow position: | chrX:21733866-21733483 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 41-414 |
| Cow position: | chrX:19402087-19402466 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 43-389 |
| Cow position: | chrX:24122355-24121999 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 229 |
| Conread position: | 52-413 |
| Cow position: | chrX:30386048-30385672 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 61-364 |
| Cow position: | chrX:11025884-11026192 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 63-329 |
| Cow position: | chrX:24136812-24136541 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 63-413 |
| Cow position: | chrX:48844886-48845243 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 93-375 |
| Cow position: | chrX:24521215-24521510 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 98 |