Cow genome map
| Conread name: | rche01_p5.y1 |
| Conread position: | 1-373 |
| Cow position: | chr1:52946158-52946523 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 158, 70 |
| Conread position: | 122-339 |
| Cow position: | chr1:14607542-14607767 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 153-391 |
| Cow position: | chr1:41107418-41107170 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 107 |
| Conread position: | 161-372 |
| Cow position: | chr1:24073682-24073473 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 164-373 |
| Cow position: | chr1:85610024-85610240 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 108, 94 |
| Conread position: | 167-372 |
| Cow position: | chr1:76138973-76139185 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 1-373 |
| Cow position: | chr10:4231238-4231608 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 13-373 |
| Cow position: | chr10:33973607-33973264 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 73 |
| Conread position: | 13-376 |
| Cow position: | chr10:30489744-30490102 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 94-373 |
| Cow position: | chr10:11771703-11771412 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 115-371 |
| Cow position: | chr10:43537223-43537485 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 148-373 |
| Cow position: | chr10:54132460-54132695 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 176-391 |
| Cow position: | chr10:37506427-37506203 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 81 |
| Conread position: | 13-373 |
| Cow position: | chr11:21599068-21598713 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 13-375 |
| Cow position: | chr11:21457146-21456774 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 27-372 |
| Cow position: | chr11:72884676-72885017 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 112-375 |
| Cow position: | chr11:67743820-67744094 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 220 |
| Conread position: | 117-373 |
| Cow position: | chr11:41216825-41216562 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 133-385 |
| Cow position: | chr11:26021253-26021513 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 140-376 |
| Cow position: | chr11:16756658-16756420 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 166-372 |
| Cow position: | chr11:12254257-12254470 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 166-376 |
| Cow position: | chr11:49432177-49432392 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 110, 93 |
| Conread position: | 146-368 |
| Cow position: | chr13:21302286-21302060 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 154-375 |
| Cow position: | chr13:44274905-44274674 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 4-494 |
| Cow position: | chr14:34351182-34350689 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 146-373 |
| Cow position: | chr14:27545819-27545581 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 148-373 |
| Cow position: | chr14:14471506-14471268 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 149-370 |
| Cow position: | chr14:15961263-15961042 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 160-372 |
| Cow position: | chr14:33165492-33165713 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 164-369 |
| Cow position: | chr14:39927280-39927492 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 165-375 |
| Cow position: | chr14:39468585-39468801 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 1-284 |
| Cow position: | chr15:26420768-26421053 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 198 |
| Conread position: | 187-376 |
| Cow position: | chr15:44654205-44654015 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 94-377 |
| Cow position: | chr16:49745426-49745722 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 223 |
| Conread position: | 140-375 |
| Cow position: | chr16:26356795-26357037 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 187-372 |
| Cow position: | chr16:25372219-25372411 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 144-367 |
| Cow position: | chr17:27084104-27083872 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 18-258 |
| Cow position: | chr18:49951381-49951143 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 73 |
| Conread position: | 92-358 |
| Cow position: | chr18:47390937-47390667 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 105-383 |
| Cow position: | chr18:30785014-30785302 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 133-373 |
| Cow position: | chr18:12078005-12077759 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 147-371 |
| Cow position: | chr18:45794545-45794319 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 87 |
| Conread position: | 150-373 |
| Cow position: | chr18:50743270-50743503 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 153-373 |
| Cow position: | chr18:18898838-18898611 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 103, 108 |
| Conread position: | 155-376 |
| Cow position: | chr18:56333582-56333814 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 160-375 |
| Cow position: | chr18:24518861-24519078 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 165-363 |
| Cow position: | chr18:16113212-16113415 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 133-372 |
| Cow position: | chr19:30017482-30017248 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 148-375 |
| Cow position: | chr19:18681262-18681030 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 153-373 |
| Cow position: | chr19:21262862-21262645 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 154-371 |
| Cow position: | chr19:12246763-12246983 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 160-370 |
| Cow position: | chr19:11136499-11136285 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 90, 186 |
| Conread position: | 11-373 |
| Cow position: | chr2:42340034-42339674 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 13-284 |
| Cow position: | chr2:50146204-50146477 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 119 |
| Conread position: | 13-373 |
| Cow position: | chr2:60400866-60401225 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 147, 67 |
| Conread position: | 65-370 |
| Cow position: | chr2:45543473-45543166 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 92-372 |
| Cow position: | chr2:65409752-65409472 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 134-373 |
| Cow position: | chr2:29376768-29377017 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 146-373 |
| Cow position: | chr2:14802560-14802321 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 160-375 |
| Cow position: | chr2:24292161-24292384 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 106 |
| Conread position: | 187-373 |
| Cow position: | chr2:51031664-51031480 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 13-344 |
| Cow position: | chr20:22843336-22843659 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 160-372 |
| Cow position: | chr20:2160885-2160666 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 99 |
| Conread position: | 169-375 |
| Cow position: | chr20:7929119-7929331 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 93-376 |
| Cow position: | chr22:43219999-43220300 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 184 |
| Conread position: | 117-375 |
| Cow position: | chr22:28173335-28173060 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 160-373 |
| Cow position: | chr22:9062481-9062693 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 187-373 |
| Cow position: | chr22:16118487-16118682 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 116-371 |
| Cow position: | chr23:26292144-26292406 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 133-378 |
| Cow position: | chr23:27008261-27008514 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 160-376 |
| Cow position: | chr23:9213321-9213543 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 196-370 |
| Cow position: | chr23:7877756-7877939 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 1-374 |
| Cow position: | chr24:6249499-6249125 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 164-377 |
| Cow position: | chr24:7171842-7172064 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 142-383 |
| Cow position: | chr25:17429136-17428884 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 121 |
| Conread position: | 153-371 |
| Cow position: | chr26:18348651-18348425 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 160-376 |
| Cow position: | chr26:27145089-27145313 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 166-373 |
| Cow position: | chr26:20479565-20479352 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 164-399 |
| Cow position: | chr28:21951712-21951467 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 146-373 |
| Cow position: | chr29:17195302-17195529 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 148-377 |
| Cow position: | chr29:23458791-23458560 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 164-373 |
| Cow position: | chr29:31551508-31551725 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 138-373 |
| Cow position: | chr3:31492745-31492988 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 147-375 |
| Cow position: | chr3:72129473-72129710 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 153-375 |
| Cow position: | chr3:59495461-59495231 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 160-373 |
| Cow position: | chr3:15403453-15403233 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 160-373 |
| Cow position: | chr3:72777773-72777989 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 161-372 |
| Cow position: | chr3:57764890-57765108 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 164-375 |
| Cow position: | chr3:25599518-25599299 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 95 |
| Conread position: | 1-373 |
| Cow position: | chr4:54010633-54011024 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 6-299 |
| Cow position: | chr4:42410063-42410346 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 60 |
| Conread position: | 100-373 |
| Cow position: | chr4:61265130-61264852 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 176, 30 |
| Conread position: | 117-372 |
| Cow position: | chr4:38837690-38837959 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 160-387 |
| Cow position: | chr4:34105581-34105810 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 99 |
| Conread position: | 164-387 |
| Cow position: | chr4:46531961-46531735 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 1-380 |
| Cow position: | chr5:67419198-67419574 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 156, 88 |
| Conread position: | 113-281 |
| Cow position: | chr5:36645744-36645573 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 150 |
| Conread position: | 117-373 |
| Cow position: | chr5:70651259-70651530 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 133-329 |
| Cow position: | chr5:55159090-55159295 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 1-289 |
| Cow position: | chr6:5127038-5127312 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 4-418 |
| Cow position: | chr6:17812258-17811851 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 96-377 |
| Cow position: | chr6:47583269-47582983 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 98-373 |
| Cow position: | chr6:7850428-7850716 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 133-373 |
| Cow position: | chr6:51690231-51689989 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 170-372 |
| Cow position: | chr6:32799011-32799221 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 89 |
| Conread position: | 14-373 |
| Cow position: | chr7:44565507-44565149 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 68 |
| Conread position: | 93-371 |
| Cow position: | chr7:37084116-37084404 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 160-330 |
| Cow position: | chr7:3526901-3526724 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 153-376 |
| Cow position: | chr8:53002215-53001983 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 160-367 |
| Cow position: | chr8:52157205-52156992 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 164-373 |
| Cow position: | chr8:2176385-2176176 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 164-373 |
| Cow position: | chr8:49249119-49248912 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 136, 67 |
| Conread position: | 164-375 |
| Cow position: | chr8:35362095-35362304 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 15-391 |
| Cow position: | chr9:48261679-48261299 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 108-379 |
| Cow position: | chr9:60342766-60343044 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 109-363 |
| Cow position: | chr9:21077025-21077292 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 132-372 |
| Cow position: | chr9:48179194-48178949 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 93-374 |
| Cow position: | chrX:31111285-31111001 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 169 |
| Conread position: | 117-337 |
| Cow position: | chrX:11889356-11889577 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 96 |
| Conread position: | 139-373 |
| Cow position: | chrX:23367685-23367446 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 146-372 |
| Cow position: | chrX:25379514-25379278 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 148-362 |
| Cow position: | chrX:11895165-11895390 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 107 |
| Conread position: | 148-371 |
| Cow position: | chrX:42209184-42209415 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 106 |