Cow genome map
| Conread name: | rche11_i21.y1 |
| Conread position: | 4-258 |
| Cow position: | chr10:10104459-10104721 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 4-297 |
| Cow position: | chr10:9427605-9427319 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 29-301 |
| Cow position: | chr10:31561255-31561541 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 204-298 |
| Cow position: | chr10:19135393-19135486 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-297 |
| Cow position: | chr11:35126464-35126157 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 4-296 |
| Cow position: | chr11:25651665-25651957 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 6-297 |
| Cow position: | chr11:2611926-2612235 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 63-296 |
| Cow position: | chr11:32582816-32583032 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 169-296 |
| Cow position: | chr11:24606118-24606245 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 173-295 |
| Cow position: | chr11:58681323-58681202 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 173-306 |
| Cow position: | chr11:35891961-35892093 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 187-310 |
| Cow position: | chr11:26049923-26050046 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-301 |
| Cow position: | chr12:1754945-1755240 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 170-294 |
| Cow position: | chr12:42078854-42078731 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 6-232 |
| Cow position: | chr13:58827137-58826909 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 63-298 |
| Cow position: | chr13:18194292-18194052 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 63-298 |
| Cow position: | chr13:55802188-55802425 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 68-293 |
| Cow position: | chr13:13771280-13771050 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 74-296 |
| Cow position: | chr13:54351998-54352213 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 91-297 |
| Cow position: | chr13:52841172-52840966 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 168-297 |
| Cow position: | chr13:26523661-26523790 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 9-296 |
| Cow position: | chr14:34386035-34386326 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 35-288 |
| Cow position: | chr14:34172555-34172818 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 59-296 |
| Cow position: | chr14:46976983-46977222 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 62-287 |
| Cow position: | chr14:33121463-33121234 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 62-297 |
| Cow position: | chr14:50095373-50095607 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 64-296 |
| Cow position: | chr14:19769753-19769987 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 92, 5 |
| Conread position: | 177-296 |
| Cow position: | chr14:30415151-30415032 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-301 |
| Cow position: | chr15:31069834-31070125 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 62-259 |
| Cow position: | chr15:33283841-33284041 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 62-296 |
| Cow position: | chr15:37346980-37346748 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 63-296 |
| Cow position: | chr15:33420507-33420269 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 99-294 |
| Cow position: | chr15:41936247-41936437 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 168-310 |
| Cow position: | chr15:11326255-11326115 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 69-286 |
| Cow position: | chr16:25961352-25961569 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 3-296 |
| Cow position: | chr17:15529244-15529522 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 71-286 |
| Cow position: | chr17:34346673-34346456 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 83-294 |
| Cow position: | chr17:30402046-30402260 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 85-297 |
| Cow position: | chr17:34349472-34349264 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 155-298 |
| Cow position: | chr17:27786361-27786503 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 168-307 |
| Cow position: | chr17:10452075-10452212 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 169-294 |
| Cow position: | chr17:17786848-17786973 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-291 |
| Cow position: | chr17:898040-898157 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 207-297 |
| Cow position: | chr17:42004089-42003999 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-238 |
| Cow position: | chr18:13537683-13537921 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 24-296 |
| Cow position: | chr18:9374961-9375250 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 48-299 |
| Cow position: | chr18:7119218-7119470 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 62-238 |
| Cow position: | chr18:9370781-9370965 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 136-296 |
| Cow position: | chr18:42465573-42465398 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 168-295 |
| Cow position: | chr18:50033706-50033835 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 168-296 |
| Cow position: | chr18:54138207-54138333 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 168-298 |
| Cow position: | chr18:6753232-6753361 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 193-308 |
| Cow position: | chr18:32560131-32560246 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 11-296 |
| Cow position: | chr19:27001224-27000945 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 62-299 |
| Cow position: | chr19:35630352-35630113 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 62-305 |
| Cow position: | chr19:45593058-45592817 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 168-292 |
| Cow position: | chr19:38053022-38053147 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 168-299 |
| Cow position: | chr19:46303502-46303635 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 193-294 |
| Cow position: | chr19:39918656-39918757 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-298 |
| Cow position: | chr2:25452459-25452713 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 71-292 |
| Cow position: | chr2:3764751-3764977 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 168-285 |
| Cow position: | chr2:18555282-18555161 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 85-299 |
| Cow position: | chr20:7402147-7401926 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 168-294 |
| Cow position: | chr20:17231486-17231611 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 171-296 |
| Cow position: | chr20:26465064-26464940 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 56-294 |
| Cow position: | chr21:33230946-33231189 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 168-297 |
| Cow position: | chr21:27616681-27616809 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 168-297 |
| Cow position: | chr21:31295916-31296042 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 48-297 |
| Cow position: | chr22:40742606-40742860 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 62-288 |
| Cow position: | chr22:15577466-15577694 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 65-293 |
| Cow position: | chr22:40159499-40159283 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 70-296 |
| Cow position: | chr22:31126989-31127218 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 82-273 |
| Cow position: | chr22:42674804-42675003 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 164-297 |
| Cow position: | chr22:35433172-35433304 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 62-278 |
| Cow position: | chr23:23506580-23506795 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 69-300 |
| Cow position: | chr23:7404670-7404912 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 168-305 |
| Cow position: | chr23:25848850-25848714 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 194-305 |
| Cow position: | chr23:27599342-27599452 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-297 |
| Cow position: | chr24:16884199-16884494 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 7-239 |
| Cow position: | chr24:28542196-28541965 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 22-295 |
| Cow position: | chr24:39844273-39844561 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 110-300 |
| Cow position: | chr24:38468311-38468118 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 172-296 |
| Cow position: | chr24:8414940-8415064 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-279 |
| Cow position: | chr25:11306015-11306278 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 19-272 |
| Cow position: | chr25:38158795-38158546 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 8 |
| Conread position: | 51-292 |
| Cow position: | chr25:38164308-38164065 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 168-296 |
| Cow position: | chr25:13758338-13758465 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 192-302 |
| Cow position: | chr25:41160973-41160862 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 9-288 |
| Cow position: | chr26:4387504-4387797 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 28-296 |
| Cow position: | chr26:14756993-14757264 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 62-238 |
| Cow position: | chr26:6853953-6854132 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 168-300 |
| Cow position: | chr26:2244880-2245010 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 18-295 |
| Cow position: | chr27:1795339-1795057 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 50-294 |
| Cow position: | chr27:8097192-8097434 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 193-297 |
| Cow position: | chr27:21076056-21076160 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-263 |
| Cow position: | chr28:4366434-4366646 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 62-292 |
| Cow position: | chr28:15160047-15159813 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 65-294 |
| Cow position: | chr28:18173547-18173315 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 168-288 |
| Cow position: | chr28:16997321-16997202 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 191-296 |
| Cow position: | chr28:5831712-5831815 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 204-297 |
| Cow position: | chr28:11405413-11405505 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 168-301 |
| Cow position: | chr29:5232239-5232370 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 9-300 |
| Cow position: | chr3:37454442-37454737 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 149-280 |
| Cow position: | chr3:51413121-51412988 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 168-287 |
| Cow position: | chr3:63709599-63709481 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 168-296 |
| Cow position: | chr3:2331136-2331264 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-296 |
| Cow position: | chr3:20878332-20878206 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 168-297 |
| Cow position: | chr3:23280468-23280597 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-302 |
| Cow position: | chr3:12015887-12016022 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 170-299 |
| Cow position: | chr3:20775999-20775871 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 176-298 |
| Cow position: | chr3:34067933-34068055 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 177-300 |
| Cow position: | chr3:39288491-39288367 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 193-296 |
| Cow position: | chr3:59878274-59878375 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 193-297 |
| Cow position: | chr3:68902939-68902838 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 63-296 |
| Cow position: | chr4:45047840-45047604 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 79-297 |
| Cow position: | chr4:16327582-16327357 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 98-296 |
| Cow position: | chr4:17857363-17857164 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 168-288 |
| Cow position: | chr4:2139130-2139248 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 168-292 |
| Cow position: | chr4:16629024-16628905 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 168-295 |
| Cow position: | chr4:7503699-7503824 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 4-296 |
| Cow position: | chr5:7814962-7814661 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 51-297 |
| Cow position: | chr5:34536025-34536270 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 63-296 |
| Cow position: | chr5:26902740-26902975 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 94-296 |
| Cow position: | chr5:73350336-73350127 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 179-297 |
| Cow position: | chr5:27604565-27604447 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 193-293 |
| Cow position: | chr5:60454613-60454514 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-298 |
| Cow position: | chr6:33337035-33337335 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 9-236 |
| Cow position: | chr6:38386249-38386020 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 47-297 |
| Cow position: | chr6:21850454-21850201 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 62-296 |
| Cow position: | chr6:192262-192025 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 64-312 |
| Cow position: | chr6:40069409-40069155 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 167-295 |
| Cow position: | chr6:19420393-19420266 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 169-298 |
| Cow position: | chr6:32920952-32920823 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-296 |
| Cow position: | chr6:45506379-45506254 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-296 |
| Cow position: | chr7:25107545-25107841 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 9-275 |
| Cow position: | chr7:21038055-21037781 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 9-295 |
| Cow position: | chr7:55130570-55130862 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 20-299 |
| Cow position: | chr7:63051345-63051629 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 51-299 |
| Cow position: | chr7:38501254-38501005 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 80-301 |
| Cow position: | chr7:20446043-20446268 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 169-297 |
| Cow position: | chr7:49357557-49357683 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 192-296 |
| Cow position: | chr7:308557-308662 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 192-296 |
| Cow position: | chr7:6683299-6683403 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-300 |
| Cow position: | chr8:5973744-5973992 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 80-296 |
| Cow position: | chr8:20646578-20646362 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 100-296 |
| Cow position: | chr8:22215838-22216040 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 165-289 |
| Cow position: | chr8:14954079-14954198 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 169-297 |
| Cow position: | chr8:16097609-16097735 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 172-296 |
| Cow position: | chr8:34006795-34006671 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 173-296 |
| Cow position: | chr8:18083792-18083915 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 173-297 |
| Cow position: | chr8:18075833-18075957 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 174-296 |
| Cow position: | chr8:24680858-24680737 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 62-306 |
| Cow position: | chr9:29664938-29664680 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 97-300 |
| Cow position: | chr9:3891807-3892014 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 168-297 |
| Cow position: | chr9:55531285-55531413 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 169-297 |
| Cow position: | chr9:29171789-29171663 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 179-295 |
| Cow position: | chr9:11302127-11302242 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 9-274 |
| Cow position: | chrX:31019234-31019511 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 62-296 |
| Cow position: | chrX:614348-614106 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 62-296 |
| Cow position: | chrX:35053118-35052869 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 100-296 |
| Cow position: | chrX:35857574-35857775 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 168-287 |
| Cow position: | chrX:28124678-28124559 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-327 |
| Cow position: | chrX:44213440-44213282 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 184-296 |
| Cow position: | chrX:7466776-7466664 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |