Non-Coding RNA Search

Cow genome map


           Conread name:
           rche25_a24.y1
        

               Conread position:
               1-119
               

               Cow position:
               chr1:29107484-29107365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-123
               

               Cow position:
               chr1:47365274-47365397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr1:77942851-77942715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               1-141
               

               Cow position:
               chr1:17635006-17634863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-143
               

               Cow position:
               chr1:30086387-30086247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 95
               

               Conread position:
               1-187
               

               Cow position:
               chr1:83120667-83120854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               1-205
               

               Cow position:
               chr1:638210-638422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:32964885-32965097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 184
               

               Conread position:
               1-220
               

               Cow position:
               chr1:5655417-5655198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr1:39297495-39297713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               196, 77
               

               Conread position:
               1-221
               

               Cow position:
               chr1:75184953-75185174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr1:48321580-48321363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               26, 101
               

               Conread position:
               1-223
               

               Cow position:
               chr1:93431153-93431360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               1-227
               

               Cow position:
               chr1:80315094-80315321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr1:29099865-29099629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 203
               

               Conread position:
               2-141
               

               Cow position:
               chr1:100140344-100140486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               2-223
               

               Cow position:
               chr1:78027834-78027610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               25, 121
               

               Conread position:
               2-229
               

               Cow position:
               chr1:55117768-55118002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 183
               

               Conread position:
               3-223
               

               Cow position:
               chr1:89776825-89776604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               9-223
               

               Cow position:
               chr1:98413003-98412789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               9-224
               

               Cow position:
               chr1:101441124-101440910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               14-176
               

               Cow position:
               chr1:64752818-64752982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               36-223
               

               Cow position:
               chr1:33881039-33881230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               39-230
               

               Cow position:
               chr1:87757519-87757326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               39-230
               

               Cow position:
               chr1:88767915-88768107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               40-223
               

               Cow position:
               chr1:91026092-91026280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               44-223
               

               Cow position:
               chr1:35434784-35434967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               45-215
               

               Cow position:
               chr1:76596149-76596323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               45-225
               

               Cow position:
               chr1:23297669-23297850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               50-223
               

               Cow position:
               chr1:11336013-11335836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               50-223
               

               Cow position:
               chr1:32496268-32496443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               55-224
               

               Cow position:
               chr1:22590081-22590253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               108, 149
               

               Conread position:
               59-231
               

               Cow position:
               chr1:55120381-55120213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               64-223
               

               Cow position:
               chr1:15983067-15982909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr10:62892447-62892245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               1-208
               

               Cow position:
               chr10:65366951-65366745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 175
               

               Conread position:
               1-209
               

               Cow position:
               chr10:349857-349650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               1-209
               

               Cow position:
               chr10:32983413-32983195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               1-214
               

               Cow position:
               chr10:16732705-16732495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               1-219
               

               Cow position:
               chr10:36211338-36211110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               1-222
               

               Cow position:
               chr10:838206-838427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               1-222
               

               Cow position:
               chr10:932202-931977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               1-223
               

               Cow position:
               chr10:1036583-1036362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               1-223
               

               Cow position:
               chr10:12404868-12405093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               1-223
               

               Cow position:
               chr10:27686678-27686900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               1-223
               

               Cow position:
               chr10:32421172-32420943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               1-223
               

               Cow position:
               chr10:32912645-32912871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               1-223
               

               Cow position:
               chr10:33720665-33720898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               1-223
               

               Cow position:
               chr10:63684862-63685091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 218
               

               Conread position:
               1-224
               

               Cow position:
               chr10:23859918-23860151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr10:69628433-69628208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               1-225
               

               Cow position:
               chr10:27687511-27687738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 181
               

               Conread position:
               2-141
               

               Cow position:
               chr10:27306018-27306158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               2-223
               

               Cow position:
               chr10:52449997-52450228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               3-184
               

               Cow position:
               chr10:42349291-42349111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               3-224
               

               Cow position:
               chr10:52419966-52420183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               3-224
               

               Cow position:
               chr10:68375446-68375234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               7-223
               

               Cow position:
               chr10:40717977-40717760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 140
               

               Conread position:
               8-208
               

               Cow position:
               chr10:51424997-51425192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               191, 118
               

               Conread position:
               24-223
               

               Cow position:
               chr10:7730533-7730335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               39-215
               

               Cow position:
               chr10:9862178-9862007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-225
               

               Cow position:
               chr10:66000604-66000418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               46-225
               

               Cow position:
               chr10:25926831-25927013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               154, 134
               

               Conread position:
               56-226
               

               Cow position:
               chr10:23068419-23068592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               1-110
               

               Cow position:
               chr11:32391090-32390981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr11:72347033-72347159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr11:7050176-7050315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               1-141
               

               Cow position:
               chr11:36258854-36258987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               1-173
               

               Cow position:
               chr11:63678374-63678202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               1-178
               

               Cow position:
               chr11:20423447-20423268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr11:11682881-11682671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               1-205
               

               Cow position:
               chr11:6604918-6604710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               1-215
               

               Cow position:
               chr11:8097867-8098084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 179
               

               Conread position:
               1-216
               

               Cow position:
               chr11:18167396-18167607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               1-222
               

               Cow position:
               chr11:51842331-51842547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               1-223
               

               Cow position:
               chr11:881522-881744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 180
               

               Conread position:
               1-223
               

               Cow position:
               chr11:9806438-9806657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               1-223
               

               Cow position:
               chr11:31888433-31888204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               1-223
               

               Cow position:
               chr11:37356218-37356442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr11:19703337-19703109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               1-227
               

               Cow position:
               chr11:36901358-36901592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               1-229
               

               Cow position:
               chr11:5144383-5144614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               1-230
               

               Cow position:
               chr11:41483281-41483505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 142
               

               Conread position:
               2-224
               

               Cow position:
               chr11:39234739-39234516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-225
               

               Cow position:
               chr11:85953432-85953221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               5-215
               

               Cow position:
               chr11:4127469-4127259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               8-140
               

               Cow position:
               chr11:42058110-42057976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               8-221
               

               Cow position:
               chr11:37125256-37125471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               9-223
               

               Cow position:
               chr11:37398917-37399127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               9-223
               

               Cow position:
               chr11:39242977-39242762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               10-225
               

               Cow position:
               chr11:37330098-37329881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 175
               

               Conread position:
               31-223
               

               Cow position:
               chr11:5252402-5252598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               31-224
               

               Cow position:
               chr11:5187624-5187428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               44-217
               

               Cow position:
               chr11:67774682-67774510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               57-223
               

               Cow position:
               chr11:39530668-39530501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 126
               

               Conread position:
               64-229
               

               Cow position:
               chr11:66674005-66674161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               159, 12
               

               Conread position:
               78-224
               

               Cow position:
               chr11:63664620-63664474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-128
               

               Cow position:
               chr12:43016162-43016032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr12:9381928-9382146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               24, 174
               

               Conread position:
               1-223
               

               Cow position:
               chr12:8978585-8978807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               1-223
               

               Cow position:
               chr12:9956118-9955893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               67, 202
               

               Conread position:
               1-224
               

               Cow position:
               chr12:2911283-2911054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               1-224
               

               Cow position:
               chr12:43972387-43972608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               2-224
               

               Cow position:
               chr12:34408728-34408952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               139, 5
               

               Conread position:
               2-233
               

               Cow position:
               chr12:31622078-31621848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               8-223
               

               Cow position:
               chr12:3016336-3016122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               8-223
               

               Cow position:
               chr12:39571824-39572040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               14-223
               

               Cow position:
               chr12:4541491-4541283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 154
               

               Conread position:
               50-223
               

               Cow position:
               chr12:8259802-8259626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 73
               

               Conread position:
               53-223
               

               Cow position:
               chr12:21241849-21242019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               166, 157
               

               Conread position:
               1-140
               

               Cow position:
               chr13:19214446-19214581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr13:47664219-47664041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               1-208
               

               Cow position:
               chr13:52288665-52288878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               1-223
               

               Cow position:
               chr13:17968559-17968338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               1-223
               

               Cow position:
               chr13:51924853-51925079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr13:53189433-53189648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               1-224
               

               Cow position:
               chr13:15700888-15701108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               4-204
               

               Cow position:
               chr13:19282160-19282365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 180
               

               Conread position:
               6-219
               

               Cow position:
               chr13:33321830-33322038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               8-223
               

               Cow position:
               chr13:30329889-30329679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               38-223
               

               Cow position:
               chr13:45321276-45321464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 94
               

               Conread position:
               39-223
               

               Cow position:
               chr13:35026166-35026352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-224
               

               Cow position:
               chr13:45305059-45305245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 6
               

               Conread position:
               1-144
               

               Cow position:
               chr14:10487655-10487796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               1-170
               

               Cow position:
               chr14:33156266-33156098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               1-172
               

               Cow position:
               chr14:24207427-24207603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr14:12337341-12337141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               1-223
               

               Cow position:
               chr14:34208051-34207826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               1-223
               

               Cow position:
               chr14:35408389-35408167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               1-224
               

               Cow position:
               chr14:8807707-8807932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               2-141
               

               Cow position:
               chr14:3690137-3690274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               2-208
               

               Cow position:
               chr14:43081693-43081493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               2-223
               

               Cow position:
               chr14:20891032-20890810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               2-224
               

               Cow position:
               chr14:5363296-5363523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               2-224
               

               Cow position:
               chr14:9228656-9228431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 220
               

               Conread position:
               3-139
               

               Cow position:
               chr14:40069122-40068989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               21-223
               

               Cow position:
               chr14:48427439-48427631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               29-242
               

               Cow position:
               chr14:31969592-31969808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               30-222
               

               Cow position:
               chr14:27622128-27622322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               39-206
               

               Cow position:
               chr14:3541468-3541299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-223
               

               Cow position:
               chr14:10618753-10618566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               44-223
               

               Cow position:
               chr14:26622084-26621903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               44-227
               

               Cow position:
               chr14:16735617-16735436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 101
               

               Conread position:
               1-141
               

               Cow position:
               chr15:11809433-11809293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               1-194
               

               Cow position:
               chr15:17289250-17289067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               1-198
               

               Cow position:
               chr15:23079285-23079476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr15:14257985-14257782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               1-221
               

               Cow position:
               chr15:20127906-20128127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr15:1998779-1998995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               139, 108
               

               Conread position:
               1-224
               

               Cow position:
               chr15:52310970-52311201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               2-223
               

               Cow position:
               chr15:234038-233799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               34-198
               

               Cow position:
               chr15:6173260-6173427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               44-223
               

               Cow position:
               chr15:11620608-11620434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               53-224
               

               Cow position:
               chr15:11347915-11348091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 131
               

               Conread position:
               53-224
               

               Cow position:
               chr15:18788382-18788553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               59-224
               

               Cow position:
               chr15:10539685-10539849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr16:33709744-33709606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr16:23384543-23384396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr16:19262197-19262403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-221
               

               Cow position:
               chr16:1632657-1632436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               1-221
               

               Cow position:
               chr16:35411995-35412214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               1-223
               

               Cow position:
               chr16:3892068-3891855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               1-223
               

               Cow position:
               chr16:7770377-7770157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               1-223
               

               Cow position:
               chr16:20984985-20984754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr16:50545647-50545870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               1-224
               

               Cow position:
               chr16:26065647-26065418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr16:200444-200220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               1-226
               

               Cow position:
               chr16:33147769-33147546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               1-226
               

               Cow position:
               chr16:49726377-49726145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               2-224
               

               Cow position:
               chr16:8786726-8786952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               3-208
               

               Cow position:
               chr16:34131434-34131637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr16:23495707-23495938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               7-141
               

               Cow position:
               chr16:27974638-27974775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               23-207
               

               Cow position:
               chr16:43196440-43196258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               33-224
               

               Cow position:
               chr16:10250725-10250533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               109, 139
               

               Conread position:
               37-223
               

               Cow position:
               chr16:54409359-54409174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               38-206
               

               Cow position:
               chr16:46545348-46545516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 122
               

               Conread position:
               39-214
               

               Cow position:
               chr16:43162696-43162871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-223
               

               Cow position:
               chr16:10444319-10444128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 149
               

               Conread position:
               39-223
               

               Cow position:
               chr16:22240309-22240123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               40-208
               

               Cow position:
               chr16:37842261-37842090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               45-223
               

               Cow position:
               chr16:22245544-22245365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               51-223
               

               Cow position:
               chr16:36430007-36429839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               54-223
               

               Cow position:
               chr16:44522975-44522807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               56-223
               

               Cow position:
               chr16:30563362-30563195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-223
               

               Cow position:
               chr16:31703599-31703432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr17:24997355-24997215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr17:891688-891479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               1-209
               

               Cow position:
               chr17:10636398-10636181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               1-221
               

               Cow position:
               chr17:21585624-21585401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               1-221
               

               Cow position:
               chr17:24861660-24861881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-222
               

               Cow position:
               chr17:27302337-27302112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr17:38189906-38189688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               1-223
               

               Cow position:
               chr17:1730249-1730475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 202
               

               Conread position:
               1-223
               

               Cow position:
               chr17:16359953-16360176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               1-223
               

               Cow position:
               chr17:21591763-21591539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               1-223
               

               Cow position:
               chr17:31562341-31562113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               1-224
               

               Cow position:
               chr17:1756928-1756700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr17:1491275-1491505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               2-224
               

               Cow position:
               chr17:25546228-25546001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 162
               

               Conread position:
               3-165
               

               Cow position:
               chr17:20347286-20347126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               3-222
               

               Cow position:
               chr17:21461133-21461354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               140, 32
               

               Conread position:
               4-223
               

               Cow position:
               chr17:15483742-15483523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               7-223
               

               Cow position:
               chr17:11052017-11052241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               8-224
               

               Cow position:
               chr17:16380554-16380333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               9-223
               

               Cow position:
               chr17:11072291-11072506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               10-128
               

               Cow position:
               chr17:25148084-25147965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               10-224
               

               Cow position:
               chr17:4879217-4879434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               131, 99
               

               Conread position:
               13-222
               

               Cow position:
               chr17:17641847-17641634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               16-223
               

               Cow position:
               chr17:1325259-1325466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-169
               

               Cow position:
               chr17:5347951-5347808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               35-222
               

               Cow position:
               chr17:11124388-11124198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               38-141
               

               Cow position:
               chr17:24988793-24988690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-208
               

               Cow position:
               chr17:41950406-41950573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-223
               

               Cow position:
               chr17:27761231-27761417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-224
               

               Cow position:
               chr17:11244530-11244717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               49-228
               

               Cow position:
               chr17:6763136-6763322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               223-432
               

               Cow position:
               chr17:41889022-41888817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               174, 100
               

               Conread position:
               1-139
               

               Cow position:
               chr18:465155-465016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr18:7115240-7115072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               1-171
               

               Cow position:
               chr18:15806288-15806461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               1-221
               

               Cow position:
               chr18:43133822-43133601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-224
               

               Cow position:
               chr18:4940439-4940217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               198, 53
               

               Conread position:
               1-224
               

               Cow position:
               chr18:42986145-42985923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               9-223
               

               Cow position:
               chr18:16351306-16351520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               9-223
               

               Cow position:
               chr18:29105686-29105470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               23-223
               

               Cow position:
               chr18:14727757-14727552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               23-223
               

               Cow position:
               chr18:54945835-54945637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               29-222
               

               Cow position:
               chr18:37219920-37220112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               169, 116
               

               Conread position:
               44-223
               

               Cow position:
               chr18:38904710-38904527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               52-214
               

               Cow position:
               chr18:18990651-18990485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               59-223
               

               Cow position:
               chr18:50301201-50301033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               79-229
               

               Cow position:
               chr18:41914661-41914810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               1-141
               

               Cow position:
               chr19:21266670-21266808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               1-209
               

               Cow position:
               chr19:2819457-2819659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               1-221
               

               Cow position:
               chr19:13222169-13222388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               1-222
               

               Cow position:
               chr19:7879454-7879240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               141, 33
               

               Conread position:
               1-224
               

               Cow position:
               chr19:1065116-1065340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               8-223
               

               Cow position:
               chr19:10552053-10551840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 148
               

               Conread position:
               37-221
               

               Cow position:
               chr19:5633741-5633560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               39-201
               

               Cow position:
               chr19:7671583-7671736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               122, 5
               

               Conread position:
               48-224
               

               Cow position:
               chr19:52753331-52753506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               151, 8
               

               Conread position:
               1-150
               

               Cow position:
               chr2:66982070-66982220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr2:46939155-46939337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               1-200
               

               Cow position:
               chr2:50138434-50138235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               1-208
               

               Cow position:
               chr2:12146257-12146462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               1-208
               

               Cow position:
               chr2:45773288-45773489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               1-215
               

               Cow position:
               chr2:46966731-46966950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr2:46773395-46773179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               1-221
               

               Cow position:
               chr2:16798932-16799153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-221
               

               Cow position:
               chr2:38838187-38837963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr2:30639609-30639841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               1-223
               

               Cow position:
               chr2:37076502-37076277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               1-223
               

               Cow position:
               chr2:38871915-38872141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               1-223
               

               Cow position:
               chr2:38876611-38876830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               195, 30
               

               Conread position:
               1-223
               

               Cow position:
               chr2:43551227-43551452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 170
               

               Conread position:
               1-223
               

               Cow position:
               chr2:74693089-74692860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               1-224
               

               Cow position:
               chr2:9937363-9937583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               1-226
               

               Cow position:
               chr2:34328880-34328654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 181
               

               Conread position:
               1-233
               

               Cow position:
               chr2:46408832-46408599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               141, 98
               

               Conread position:
               1-235
               

               Cow position:
               chr2:70829715-70829950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               2-224
               

               Cow position:
               chr2:46008577-46008352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               3-201
               

               Cow position:
               chr2:38897413-38897605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               7-224
               

               Cow position:
               chr2:54448633-54448852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               8-223
               

               Cow position:
               chr2:46025438-46025654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               9-223
               

               Cow position:
               chr2:44556673-44556455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               31-141
               

               Cow position:
               chr2:86513782-86513673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               33-223
               

               Cow position:
               chr2:57381677-57381487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               97, 113
               

               Conread position:
               37-208
               

               Cow position:
               chr2:65399985-65400161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               105, 147
               

               Conread position:
               39-171
               

               Cow position:
               chr2:10970135-10969998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               39-223
               

               Cow position:
               chr2:41697498-41697684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-224
               

               Cow position:
               chr2:7348234-7348046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 5
               

               Conread position:
               39-225
               

               Cow position:
               chr2:39579065-39579254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               46-224
               

               Cow position:
               chr2:1332390-1332569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               1-140
               

               Cow position:
               chr20:23760922-23761061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               1-141
               

               Cow position:
               chr20:20142732-20142595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr20:19124783-19124555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               1-223
               

               Cow position:
               chr20:30748882-30748659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               1-223
               

               Cow position:
               chr20:34105890-34105663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 204
               

               Conread position:
               1-224
               

               Cow position:
               chr20:35652285-35652508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               1-225
               

               Cow position:
               chr20:7380977-7380751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               1-225
               

               Cow position:
               chr20:19620878-19621114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr20:3315151-3315374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               196, 12
               

               Conread position:
               9-145
               

               Cow position:
               chr20:36174678-36174541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               34-223
               

               Cow position:
               chr20:37067522-37067333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-224
               

               Cow position:
               chr20:38558235-38558057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               53-173
               

               Cow position:
               chr20:38659152-38659032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-225
               

               Cow position:
               chr20:35723214-35723380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               1-110
               

               Cow position:
               chr21:7074184-7074076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr21:7747593-7747723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               1-131
               

               Cow position:
               chr21:41569414-41569285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               1-140
               

               Cow position:
               chr21:12898627-12898766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr21:6326666-6326526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               1-141
               

               Cow position:
               chr21:17933833-17933687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               1-214
               

               Cow position:
               chr21:41548111-41547905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               1-221
               

               Cow position:
               chr21:47963475-47963258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               1-223
               

               Cow position:
               chr21:1184771-1184549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr21:8851097-8851327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               1-223
               

               Cow position:
               chr21:20186195-20185963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               1-223
               

               Cow position:
               chr21:20786018-20785786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               1-224
               

               Cow position:
               chr21:23639691-23639453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               2-223
               

               Cow position:
               chr21:41532410-41532632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr21:24735392-24735162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-223
               

               Cow position:
               chr21:25592836-25592619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               3-223
               

               Cow position:
               chr21:42475251-42475028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               15-223
               

               Cow position:
               chr21:29200619-29200830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               126, 169
               

               Conread position:
               22-225
               

               Cow position:
               chr21:24207623-24207827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               97, 86
               

               Conread position:
               23-225
               

               Cow position:
               chr21:35449699-35449492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 158
               

               Conread position:
               30-223
               

               Cow position:
               chr21:34428408-34428602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               30-224
               

               Cow position:
               chr21:20172582-20172390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               39-226
               

               Cow position:
               chr21:15249896-15250085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               43-225
               

               Cow position:
               chr21:46767163-46766973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               44-223
               

               Cow position:
               chr21:42169460-42169637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               144, 130
               

               Conread position:
               47-223
               

               Cow position:
               chr21:48595941-48595766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               152, 70
               

               Conread position:
               50-223
               

               Cow position:
               chr21:16845179-16845005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               53-223
               

               Cow position:
               chr21:43626654-43626483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               71-223
               

               Cow position:
               chr21:9206933-9206777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 114
               

               Conread position:
               1-128
               

               Cow position:
               chr22:18484710-18484838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               1-222
               

               Cow position:
               chr22:5455292-5455068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr22:29053459-29053234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               1-227
               

               Cow position:
               chr22:31917445-31917672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               10-208
               

               Cow position:
               chr22:1494976-1494769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 178
               

               Conread position:
               10-223
               

               Cow position:
               chr22:3070227-3070440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               13-170
               

               Cow position:
               chr22:29050095-29049946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               31-215
               

               Cow position:
               chr22:22541793-22541606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 152
               

               Conread position:
               40-224
               

               Cow position:
               chr22:5653544-5653356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr23:3531688-3531825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               1-140
               

               Cow position:
               chr23:3552521-3552381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr23:2536491-2536693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               1-217
               

               Cow position:
               chr23:37977315-37977093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               1-221
               

               Cow position:
               chr23:39032472-39032246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr23:5424716-5424940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               141, 33
               

               Conread position:
               1-223
               

               Cow position:
               chr23:21730258-21730033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               1-224
               

               Cow position:
               chr23:39078299-39078085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               1-225
               

               Cow position:
               chr23:13562471-13562242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr23:4506611-4506842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr23:18271878-18272119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr23:1165045-1164814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               1-238
               

               Cow position:
               chr23:35974280-35974057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               2-223
               

               Cow position:
               chr23:4785722-4785958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 83
               

               Conread position:
               3-221
               

               Cow position:
               chr23:9728522-9728303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               7-223
               

               Cow position:
               chr23:3521770-3521982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 111
               

               Conread position:
               8-223
               

               Cow position:
               chr23:37098754-37098975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 177
               

               Conread position:
               39-200
               

               Cow position:
               chr23:9463813-9463976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               39-223
               

               Cow position:
               chr23:20785713-20785899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               39-224
               

               Cow position:
               chr23:39092625-39092809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               42-215
               

               Cow position:
               chr23:38426634-38426803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               44-223
               

               Cow position:
               chr23:21746936-21747112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               45-223
               

               Cow position:
               chr23:39491393-39491212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 139
               

               Conread position:
               52-225
               

               Cow position:
               chr23:14176843-14177019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               1-167
               

               Cow position:
               chr24:26693600-26693434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 141
               

               Conread position:
               1-208
               

               Cow position:
               chr24:113336-113138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 73
               

               Conread position:
               1-215
               

               Cow position:
               chr24:40560817-40560607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               1-221
               

               Cow position:
               chr24:5916567-5916788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               1-222
               

               Cow position:
               chr24:30265392-30265170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               198, 29
               

               Conread position:
               1-223
               

               Cow position:
               chr24:16618383-16618159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               1-223
               

               Cow position:
               chr24:28760400-28760621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               1-223
               

               Cow position:
               chr24:39510971-39511187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               1-223
               

               Cow position:
               chr24:39673335-39673558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               2-223
               

               Cow position:
               chr24:2454600-2454386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               3-226
               

               Cow position:
               chr24:27743275-27743054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               5-222
               

               Cow position:
               chr24:8399042-8398827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               7-223
               

               Cow position:
               chr24:28829494-28829271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               28-205
               

               Cow position:
               chr24:2930350-2930169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               104, 157
               

               Conread position:
               29-223
               

               Cow position:
               chr24:39798821-39798624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               32-225
               

               Cow position:
               chr24:40862447-40862252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 122
               

               Conread position:
               39-224
               

               Cow position:
               chr24:21129418-21129605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 5
               

               Conread position:
               1-126
               

               Cow position:
               chr25:5779401-5779522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr25:8544020-8544160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 134
               

               Conread position:
               1-198
               

               Cow position:
               chr25:6260853-6260656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 180
               

               Conread position:
               1-205
               

               Cow position:
               chr25:7222031-7221824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               1-208
               

               Cow position:
               chr25:9143-8927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               1-223
               

               Cow position:
               chr25:16805793-16805574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               1-223
               

               Cow position:
               chr25:26243721-26243500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               1-225
               

               Cow position:
               chr25:36035219-36035449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 174
               

               Conread position:
               2-223
               

               Cow position:
               chr25:22585475-22585258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               6-116
               

               Cow position:
               chr25:6067064-6066954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               8-223
               

               Cow position:
               chr25:22569524-22569742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               9-227
               

               Cow position:
               chr25:16155136-16155352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               10-138
               

               Cow position:
               chr25:21956303-21956174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               25-224
               

               Cow position:
               chr25:6130982-6131185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               25-224
               

               Cow position:
               chr25:36075893-36075691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               30-198
               

               Cow position:
               chr25:27495693-27495864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 151
               

               Conread position:
               34-223
               

               Cow position:
               chr25:11256282-11256093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               39-223
               

               Cow position:
               chr25:31246986-31246801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               104, 5
               

               Conread position:
               41-223
               

               Cow position:
               chr25:24580521-24580706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 152
               

               Conread position:
               44-215
               

               Cow position:
               chr25:18009947-18009774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               45-223
               

               Cow position:
               chr25:10292204-10292385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               55-223
               

               Cow position:
               chr25:24605035-24604863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               63-220
               

               Cow position:
               chr25:15456162-15456001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               77-234
               

               Cow position:
               chr25:11321358-11321198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 107
               

               Conread position:
               79-222
               

               Cow position:
               chr25:15656834-15656987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-198
               

               Cow position:
               chr26:16049653-16049849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr26:19381667-19381883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               24, 207
               

               Conread position:
               1-223
               

               Cow position:
               chr26:4827928-4827697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               1-223
               

               Cow position:
               chr26:30871867-30871644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr26:19175399-19175623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               1-225
               

               Cow position:
               chr26:20868245-20868014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               30-221
               

               Cow position:
               chr26:16753631-16753440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               34-223
               

               Cow position:
               chr26:15530261-15530078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               34-223
               

               Cow position:
               chr26:16446981-16447177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               39-243
               

               Cow position:
               chr26:219107-219314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               44-223
               

               Cow position:
               chr26:9868760-9868938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 82
               

               Conread position:
               58-228
               

               Cow position:
               chr26:27469948-27469773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               1-196
               

               Cow position:
               chr27:15106199-15106000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               2-224
               

               Cow position:
               chr27:3794652-3794425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               3-224
               

               Cow position:
               chr27:26465545-26465321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               3-240
               

               Cow position:
               chr27:26470343-26470107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               4-224
               

               Cow position:
               chr27:29664572-29664794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               23, 182
               

               Conread position:
               7-203
               

               Cow position:
               chr27:24717808-24718009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr27:27412736-27412953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr27:27714835-27715056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 185
               

               Conread position:
               63-224
               

               Cow position:
               chr27:26459468-26459307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 152
               

               Conread position:
               1-126
               

               Cow position:
               chr28:10778917-10778794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               1-204
               

               Cow position:
               chr28:10695594-10695396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               1-208
               

               Cow position:
               chr28:5414630-5414837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               23, 175
               

               Conread position:
               1-223
               

               Cow position:
               chr28:4133553-4133774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               1-223
               

               Cow position:
               chr28:11097304-11097517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               1-223
               

               Cow position:
               chr28:18714343-18714567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               1-223
               

               Cow position:
               chr28:32152544-32152311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               1-225
               

               Cow position:
               chr28:34761320-34761545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr28:87499-87280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               135, 193
               

               Conread position:
               8-223
               

               Cow position:
               chr28:1656648-1656858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               16-221
               

               Cow position:
               chr28:18585018-18584812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               17-223
               

               Cow position:
               chr28:23801993-23801795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               23-237
               

               Cow position:
               chr28:9792758-9792973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr29:1542106-1541962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               1-141
               

               Cow position:
               chr29:1627573-1627714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr29:29783659-29783859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr29:3841125-3840915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               1-224
               

               Cow position:
               chr29:26737806-26738032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               1-224
               

               Cow position:
               chr29:27060306-27060533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               1-226
               

               Cow position:
               chr29:13562144-13561915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 125
               

               Conread position:
               3-222
               

               Cow position:
               chr29:37996530-37996755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               24, 187
               

               Conread position:
               3-223
               

               Cow position:
               chr29:44022126-44021898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               7-224
               

               Cow position:
               chr29:13386883-13386666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 24
               

               Conread position:
               8-151
               

               Cow position:
               chr29:27058659-27058515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               23-223
               

               Cow position:
               chr29:24311799-24312001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               39-224
               

               Cow position:
               chr29:20672911-20673098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 5
               

               Conread position:
               49-223
               

               Cow position:
               chr29:38865546-38865719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               69-209
               

               Cow position:
               chr29:36478258-36478402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               95-224
               

               Cow position:
               chr29:33557529-33557657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr3:36415955-36416145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:22703063-22702865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr3:7865335-7865116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               1-223
               

               Cow position:
               chr3:4126876-4127095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               1-223
               

               Cow position:
               chr3:7837496-7837711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr3:37256025-37256246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               1-223
               

               Cow position:
               chr3:63270868-63270649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               1-224
               

               Cow position:
               chr3:3643472-3643698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               1-224
               

               Cow position:
               chr3:14185463-14185237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               1-224
               

               Cow position:
               chr3:23938421-23938651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 111
               

               Conread position:
               1-227
               

               Cow position:
               chr3:28926202-28926413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               8-141
               

               Cow position:
               chr3:35151154-35151021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               8-223
               

               Cow position:
               chr3:22699720-22699505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               9-131
               

               Cow position:
               chr3:36543791-36543914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               9-223
               

               Cow position:
               chr3:19236473-19236255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               9-223
               

               Cow position:
               chr3:26586226-26586433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               10-215
               

               Cow position:
               chr3:52026607-52026812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               132, 154
               

               Conread position:
               14-211
               

               Cow position:
               chr3:69220209-69220406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-224
               

               Cow position:
               chr3:75077061-75077252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               27-221
               

               Cow position:
               chr3:45839640-45839448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               31-224
               

               Cow position:
               chr3:74797379-74797574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               32-225
               

               Cow position:
               chr3:5052335-5052141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               34-223
               

               Cow position:
               chr3:2682750-2682934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               156, 25
               

               Conread position:
               44-202
               

               Cow position:
               chr3:9255388-9255229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               79-223
               

               Cow position:
               chr3:33568050-33568194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr4:59065178-59065315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr4:32366807-32366671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               1-141
               

               Cow position:
               chr4:14527239-14527375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               1-176
               

               Cow position:
               chr4:31180257-31180079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr4:60941981-60941788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               1-205
               

               Cow position:
               chr4:61680527-61680733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 6
               

               Conread position:
               1-214
               

               Cow position:
               chr4:59866180-59866388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               142, 37
               

               Conread position:
               1-221
               

               Cow position:
               chr4:5227953-5228174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-221
               

               Cow position:
               chr4:12228058-12227839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr4:6656565-6656338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr4:20316234-20316455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               1-224
               

               Cow position:
               chr4:52119882-52119655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr4:56412547-56412315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               2-223
               

               Cow position:
               chr4:45986673-45986905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-223
               

               Cow position:
               chr4:40252491-40252704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               7-128
               

               Cow position:
               chr4:26685936-26685814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               9-223
               

               Cow position:
               chr4:5265432-5265212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 176
               

               Conread position:
               13-223
               

               Cow position:
               chr4:21615015-21615222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               25-224
               

               Cow position:
               chr4:20647776-20647579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               30-188
               

               Cow position:
               chr4:1918214-1918058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               43-224
               

               Cow position:
               chr4:38656398-38656577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               1-129
               

               Cow position:
               chr5:24886927-24887057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr5:24893365-24893494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               1-141
               

               Cow position:
               chr5:19004402-19004262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr5:12785246-12785101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               1-198
               

               Cow position:
               chr5:43659780-43659586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               1-200
               

               Cow position:
               chr5:68391571-68391771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               1-206
               

               Cow position:
               chr5:22847134-22846928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               146, 16
               

               Conread position:
               1-221
               

               Cow position:
               chr5:8763579-8763799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-221
               

               Cow position:
               chr5:47997176-47996955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr5:27990764-27990542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 170
               

               Conread position:
               1-223
               

               Cow position:
               chr5:46862433-46862210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr5:44114487-44114711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               2-223
               

               Cow position:
               chr5:44888197-44888423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 69
               

               Conread position:
               8-221
               

               Cow position:
               chr5:18777964-18777749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               9-223
               

               Cow position:
               chr5:17044188-17043974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               9-223
               

               Cow position:
               chr5:67964563-67964777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               24-224
               

               Cow position:
               chr5:40699274-40699068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               107, 199
               

               Conread position:
               31-223
               

               Cow position:
               chr5:2187178-2186986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               157, 59
               

               Conread position:
               64-223
               

               Cow position:
               chr5:33715348-33715186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               76-223
               

               Cow position:
               chr5:34547606-34547466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               1-172
               

               Cow position:
               chr6:68572272-68572105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr6:11087177-11086994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 173
               

               Conread position:
               1-208
               

               Cow position:
               chr6:49166814-49167032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               1-215
               

               Cow position:
               chr6:22602038-22602253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 143
               

               Conread position:
               1-215
               

               Cow position:
               chr6:44820055-44819840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               1-219
               

               Cow position:
               chr6:60174652-60174876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               32, 114
               

               Conread position:
               1-221
               

               Cow position:
               chr6:23899102-23899322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               1-221
               

               Cow position:
               chr6:61642770-61642991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               30, 182
               

               Conread position:
               1-225
               

               Cow position:
               chr6:42932129-42932354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               1-228
               

               Cow position:
               chr6:16550747-16550975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr6:60258497-60258732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               1-247
               

               Cow position:
               chr6:26224062-26224306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               2-223
               

               Cow position:
               chr6:20676020-20676244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               7-223
               

               Cow position:
               chr6:26207364-26207589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr6:58035608-58035830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               23-173
               

               Cow position:
               chr6:26938107-26937958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 112
               

               Conread position:
               29-223
               

               Cow position:
               chr6:28429669-28429476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               168, 31
               

               Conread position:
               29-227
               

               Cow position:
               chr6:2869873-2870073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               170, 116
               

               Conread position:
               30-223
               

               Cow position:
               chr6:44686471-44686283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               38-208
               

               Cow position:
               chr6:1012811-1012643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 6
               

               Conread position:
               42-223
               

               Cow position:
               chr6:5668065-5667869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               44-229
               

               Cow position:
               chr6:27275073-27275252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr7:44938420-44938271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr7:3662958-3662744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               1-221
               

               Cow position:
               chr7:18108644-18108425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               1-222
               

               Cow position:
               chr7:43568979-43569202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 186
               

               Conread position:
               1-223
               

               Cow position:
               chr7:21994478-21994259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               1-223
               

               Cow position:
               chr7:23795233-23795006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               1-223
               

               Cow position:
               chr7:25127090-25126869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 145
               

               Conread position:
               1-223
               

               Cow position:
               chr7:31117888-31118111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr7:49094094-49094313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               198, 19
               

               Conread position:
               1-224
               

               Cow position:
               chr7:32919275-32919503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               1-226
               

               Cow position:
               chr7:3168780-3169009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               2-207
               

               Cow position:
               chr7:43870758-43870549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               25, 158
               

               Conread position:
               2-221
               

               Cow position:
               chr7:5343240-5343448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               2-223
               

               Cow position:
               chr7:58445390-58445607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               3-224
               

               Cow position:
               chr7:43899615-43899392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               106, 35
               

               Conread position:
               9-223
               

               Cow position:
               chr7:45939893-45940111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               11-225
               

               Cow position:
               chr7:43051683-43051897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               29-225
               

               Cow position:
               chr7:14403034-14402836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               31-225
               

               Cow position:
               chr7:52896799-52896600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               34-227
               

               Cow position:
               chr7:2128004-2128200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               37-226
               

               Cow position:
               chr7:23927816-23927622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 167
               

               Conread position:
               44-223
               

               Cow position:
               chr7:4699443-4699264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               45-223
               

               Cow position:
               chr7:8606930-8606755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               1-131
               

               Cow position:
               chr8:4052534-4052660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               1-186
               

               Cow position:
               chr8:7676678-7676864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               1-221
               

               Cow position:
               chr8:26829748-26829527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr8:26082673-26082451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-223
               

               Cow position:
               chr8:27827581-27827358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr8:54009617-54009831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               1-224
               

               Cow position:
               chr8:4127524-4127753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               1-224
               

               Cow position:
               chr8:35511739-35511528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               1-224
               

               Cow position:
               chr8:48978691-48978470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr8:50704821-50704582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr8:13847366-13847128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               26, 172
               

               Conread position:
               1-242
               

               Cow position:
               chr8:40324688-40324440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 138
               

               Conread position:
               2-145
               

               Cow position:
               chr8:38367653-38367509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr8:52022801-52022602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               2-224
               

               Cow position:
               chr8:6569108-6569329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               4-223
               

               Cow position:
               chr8:1626283-1626507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               9-223
               

               Cow position:
               chr8:5519002-5519216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-224
               

               Cow position:
               chr8:49793228-49793450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 174
               

               Conread position:
               12-223
               

               Cow position:
               chr8:55930077-55930292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               16-224
               

               Cow position:
               chr8:13324150-13324353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               188, 126
               

               Conread position:
               20-226
               

               Cow position:
               chr8:9294678-9294466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 160
               

               Conread position:
               28-223
               

               Cow position:
               chr8:5440289-5440475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               30-224
               

               Cow position:
               chr8:33516531-33516333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               155, 46
               

               Conread position:
               44-223
               

               Cow position:
               chr8:54315889-54315710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               45-140
               

               Cow position:
               chr8:45858192-45858287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-216
               

               Cow position:
               chr8:30563635-30563813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               50-223
               

               Cow position:
               chr8:5655021-5655201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               54-223
               

               Cow position:
               chr8:25582226-25582061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr9:7798562-7798702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               1-184
               

               Cow position:
               chr9:36681734-36681913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               1-204
               

               Cow position:
               chr9:25574555-25574750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               1-207
               

               Cow position:
               chr9:6590063-6590276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr9:51279848-51280067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               1-219
               

               Cow position:
               chr9:36426084-36426306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               1-222
               

               Cow position:
               chr9:23518868-23518650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 34
               

               Conread position:
               1-223
               

               Cow position:
               chr9:6134086-6133864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 95
               

               Conread position:
               1-223
               

               Cow position:
               chr9:9733426-9733201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               1-223
               

               Cow position:
               chr9:15223884-15223658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               1-223
               

               Cow position:
               chr9:56294103-56294319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               1-224
               

               Cow position:
               chr9:25794388-25794612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               1-224
               

               Cow position:
               chr9:44609794-44610015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               1-226
               

               Cow position:
               chr9:6126954-6126735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               1-227
               

               Cow position:
               chr9:45406735-45406960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               149, 104
               

               Conread position:
               1-246
               

               Cow position:
               chr9:10290366-10290116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               3-224
               

               Cow position:
               chr9:41954051-41954269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               4-215
               

               Cow position:
               chr9:36396765-36396982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               7-225
               

               Cow position:
               chr9:21499731-21499517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               9-141
               

               Cow position:
               chr9:61851711-61851577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               9-221
               

               Cow position:
               chr9:50822586-50822372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               15-223
               

               Cow position:
               chr9:10160364-10160157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               30-224
               

               Cow position:
               chr9:8847871-8848063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               37-223
               

               Cow position:
               chr9:5478707-5478887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               39-214
               

               Cow position:
               chr9:46090610-46090438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               44-223
               

               Cow position:
               chr9:54107930-54107750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               48-223
               

               Cow position:
               chr9:26528557-26528734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               63-215
               

               Cow position:
               chr9:51276173-51276016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-95
               

               Cow position:
               chrX:23320505-23320410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-134
               

               Cow position:
               chrX:31910723-31910862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-139
               

               Cow position:
               chrX:34635536-34635675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-140
               

               Cow position:
               chrX:34767803-34767944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-141
               

               Cow position:
               chrX:10062235-10062094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-143
               

               Cow position:
               chrX:6999589-6999446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               1-193
               

               Cow position:
               chrX:25180419-25180225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               1-220
               

               Cow position:
               chrX:16893589-16893369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               1-221
               

               Cow position:
               chrX:832294-832075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               1-223
               

               Cow position:
               chrX:3513281-3513506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               1-223
               

               Cow position:
               chrX:27529595-27529372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               1-225
               

               Cow position:
               chrX:38741125-38740900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               2-224
               

               Cow position:
               chrX:34213818-34213595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               3-188
               

               Cow position:
               chrX:37251473-37251284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-223
               

               Cow position:
               chrX:38129247-38129477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               3-224
               

               Cow position:
               chrX:35981682-35981462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               7-182
               

               Cow position:
               chrX:40315844-40315664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               41, 166
               

               Conread position:
               7-222
               

               Cow position:
               chrX:33159050-33158829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-223
               

               Cow position:
               chrX:1742949-1743173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               7-226
               

               Cow position:
               chrX:38674888-38674662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 205
               

               Conread position:
               7-228
               

               Cow position:
               chrX:29815802-29815577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               9-226
               

               Cow position:
               chrX:29145481-29145263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               15-223
               

               Cow position:
               chrX:3450823-3451037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               37-165
               

               Cow position:
               chrX:29539082-29538950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               44-224
               

               Cow position:
               chrX:36874171-36873990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               53-227
               

               Cow position:
               chrX:25179639-25179468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               61-198
               

               Cow position:
               chrX:34830273-34830410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-224
               

               Cow position:
               chrX:23323112-23323257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               78-227
               

               Cow position:
               chrX:33008528-33008379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
Conread position:	1-119
Cow position:	chr1:29107484-29107365 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	102
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	23, 0
Conread position:	1-123
Cow position:	chr1:47365274-47365397 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	101
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	26, 0
Conread position:	1-137
Cow position:	chr1:77942851-77942715 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	108
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	26, 83
Conread position:	1-141
Cow position:	chr1:17635006-17634863 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	112
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	23, 0
Conread position:	1-143
Cow position:	chr1:30086387-30086247 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	113
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	27, 95
Conread position:	1-187
Cow position:	chr1:83120667-83120854 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	134
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	23, 78
Conread position:	1-205
Cow position:	chr1:638210-638422 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	162
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	26, 0
Conread position:	1-208
Cow position:	chr1:32964885-32965097 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	152
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	23, 184
Conread position:	1-220
Cow position:	chr1:5655417-5655198 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	163
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	0, 0
Conread position:	1-221
Cow position:	chr1:39297495-39297713 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	155
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	196, 77
Conread position:	1-223
Cow position:	chr1:48321580-48321363 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	168
Alignm E-value:	7e-37
Alignm gaps (pig, cow):	26, 101
Conread position:	1-227
Cow position:	chr1:80315094-80315321 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	166
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	26, 0
Conread position:	1-231
Cow position:	chr1:29099865-29099629 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	167
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	23, 203
Conread position:	2-141
Cow position:	chr1:100140344-100140486 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	109
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	24, 0
Conread position:	2-223
Cow position:	chr1:78027834-78027610 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	173
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	25, 121
Conread position:	2-229
Cow position:	chr1:55117768-55118002 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	174
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	27, 183
Conread position:	3-223
Cow position:	chr1:89776825-89776604 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	172
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	16, 107
Conread position:	9-223
Cow position:	chr1:98413003-98412789 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	162
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	18, 10
Conread position:	9-224
Cow position:	chr1:101441124-101440910 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	157
Alignm E-value:	5e-34
Alignm gaps (pig, cow):	18, 137
Conread position:	14-176
Cow position:	chr1:64752818-64752982 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	128
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	13, 26