Cow genome map
| Conread name: | rcje06_p3.y1 |
| Conread position: | 1-110 |
| Cow position: | chr10:25501459-25501350 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-458 |
| Cow position: | chr10:60752530-60752250 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 89 |
| Conread position: | 189-458 |
| Cow position: | chr10:3533184-3532908 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 227-455 |
| Cow position: | chr13:44015463-44015696 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 183-447 |
| Cow position: | chr14:34375814-34375545 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 124 |
| Conread position: | 185-447 |
| Cow position: | chr14:24517593-24517324 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 186-458 |
| Cow position: | chr14:37617628-37617898 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 185-466 |
| Cow position: | chr15:27285459-27285743 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 186-457 |
| Cow position: | chr15:37798416-37798128 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-148 |
| Cow position: | chr17:25742976-25742827 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 183-457 |
| Cow position: | chr17:12434167-12433878 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 184-463 |
| Cow position: | chr17:4065045-4064771 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 169, 30 |
| Conread position: | 1-152 |
| Cow position: | chr18:16580420-16580572 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 246-423 |
| Cow position: | chr18:42391115-42391293 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 107, 175 |
| Conread position: | 185-447 |
| Cow position: | chr21:38701029-38701309 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 185-457 |
| Cow position: | chr21:13313067-13312791 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 1-138 |
| Cow position: | chr22:12964872-12965008 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 1-133 |
| Cow position: | chr23:6664195-6664327 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr23:23937858-23937995 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 1-153 |
| Cow position: | chr23:11731004-11731158 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 184-441 |
| Cow position: | chr23:20914351-20914080 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 191-384 |
| Cow position: | chr23:4547613-4547407 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 189 |
| Conread position: | 1-168 |
| Cow position: | chr24:2129404-2129235 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 157 |
| Conread position: | 1-110 |
| Cow position: | chr25:24491081-24490971 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 181-332 |
| Cow position: | chr26:4584610-4584754 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 184-446 |
| Cow position: | chr27:15097362-15097633 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 185-455 |
| Cow position: | chr27:10033655-10033927 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 187-457 |
| Cow position: | chr27:13818386-13818659 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 183-458 |
| Cow position: | chr28:1550896-1551176 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 200 |
| Conread position: | 241-447 |
| Cow position: | chr28:7801573-7801776 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 250-441 |
| Cow position: | chr29:17180530-17180721 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 111 |
| Conread position: | 183-465 |
| Cow position: | chr6:59655359-59655061 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 66, 292 |
| Conread position: | 185-385 |
| Cow position: | chr6:30496611-30496815 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 185-447 |
| Cow position: | chr6:4494303-4494024 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 145, 64 |
| Conread position: | 186-463 |
| Cow position: | chr6:37510565-37510842 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 8 |
| Conread position: | 1-108 |
| Cow position: | chr7:62048190-62048297 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-457 |
| Cow position: | chr7:33380887-33381177 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 46, 191 |
| Conread position: | 184-468 |
| Cow position: | chr7:43944400-43944103 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 182-457 |
| Cow position: | chr8:13904052-13904320 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 185-334 |
| Cow position: | chr8:18958930-18959080 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 185-372 |
| Cow position: | chr8:26579596-26579397 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 185-459 |
| Cow position: | chr8:33998207-33998490 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 1-133 |
| Cow position: | chr9:6595799-6595930 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 184-455 |
| Cow position: | chr9:35442360-35442068 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 61, 256 |
| Conread position: | 185-456 |
| Cow position: | chr9:10790731-10790458 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 185-459 |
| Cow position: | chr9:28891468-28891760 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 189-465 |
| Cow position: | chr9:23989238-23989521 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 46, 159 |