Cow genome map

Conread name: rcki04_h18.y1

Conread position: 263-413
Cow position: chr1:40515013-40514859 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 263-415
Cow position: chr1:30032750-30032907 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 114

Conread position: 267-416
Cow position: chr1:51650620-51650773 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 35

Conread position: 273-416
Cow position: chr1:67901443-67901301 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 102

Conread position: 13-98
Cow position: chr10:28792334-28792419 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 106-236
Cow position: chr10:28798220-28798350 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 119
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 262-413
Cow position: chr10:8338792-8338939 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 117

Conread position: 262-416
Cow position: chr10:61295803-61295947 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 37

Conread position: 265-421
Cow position: chr10:20376382-20376226 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 40

Conread position: 278-411
Cow position: chr10:20383490-20383357 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 97

Conread position: 264-415
Cow position: chr11:56178664-56178815 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 67

Conread position: 265-413
Cow position: chr11:13499083-13499232 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 55

Conread position: 256-415
Cow position: chr12:22119959-22120118 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 44

Conread position: 256-416
Cow position: chr13:60423642-60423806 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 120

Conread position: 260-401
Cow position: chr13:11828776-11828634 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 70

Conread position: 262-416
Cow position: chr13:5310709-5310863 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 65

Conread position: 265-414
Cow position: chr13:20544132-20543978 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 112

Conread position: 276-415
Cow position: chr13:34935036-34935177 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 247-416
Cow position: chr14:40337761-40337932 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 87

Conread position: 262-415
Cow position: chr14:35389731-35389574 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 100

Conread position: 253-406
Cow position: chr15:16592278-16592121 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 9

Conread position: 258-416
Cow position: chr15:32681502-32681342 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 75

Conread position: 273-413
Cow position: chr15:35650110-35649967 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 102

Conread position: 263-416
Cow position: chr16:42106668-42106816 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 24

Conread position: 265-437
Cow position: chr16:28157372-28157545 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 105

Conread position: 267-416
Cow position: chr16:19715060-19714908 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 275-394
Cow position: chr16:28876054-28876173 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 100

Conread position: 255-419
Cow position: chr17:36798719-36798555 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 9

Conread position: 246-416
Cow position: chr18:46888974-46888804 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 89

Conread position: 267-416
Cow position: chr18:17995515-17995362 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 273-396
Cow position: chr19:45723811-45723691 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 58

Conread position: 262-416
Cow position: chr2:16283965-16284119 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 48

Conread position: 264-413
Cow position: chr2:36054618-36054464 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 117

Conread position: 265-416
Cow position: chr2:7900020-7900176 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 106

Conread position: 265-416
Cow position: chr2:24395166-24395009 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 70

Conread position: 276-416
Cow position: chr2:44167459-44167317 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 264-414
Cow position: chr20:10104044-10103894 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 112

Conread position: 267-413
Cow position: chr20:3031537-3031687 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 75

Conread position: 254-416
Cow position: chr21:357460-357624 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 120

Conread position: 273-408
Cow position: chr21:13161735-13161863 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 276-416
Cow position: chr21:9890398-9890544 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 256-416
Cow position: chr22:9463906-9464070 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 120

Conread position: 264-413
Cow position: chr22:17071811-17071968 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 276-401
Cow position: chr22:13712486-13712360 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 100

Conread position: 280-416
Cow position: chr22:8879702-8879841 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 89

Conread position: 253-417
Cow position: chr23:29452726-29452558 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 12

Conread position: 261-416
Cow position: chr23:2297773-2297619 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 141, 113

Conread position: 268-400
Cow position: chr23:1331472-1331340 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 21

Conread position: 280-416
Cow position: chr25:33666120-33665977 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 275-413
Cow position: chr27:16430983-16431121 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 44

Conread position: 258-409
Cow position: chr28:24666044-24666194 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 118

Conread position: 261-394
Cow position: chr28:25706767-25706633 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 115

Conread position: 264-401
Cow position: chr28:21324205-21324344 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 113

Conread position: 265-401
Cow position: chr28:5763858-5763996 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 112

Conread position: 289-415
Cow position: chr28:17313211-17313342 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 88

Conread position: 256-394
Cow position: chr29:8659669-8659808 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 114

Conread position: 267-413
Cow position: chr29:27264060-27263907 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 227-416
Cow position: chr3:2855637-2855447 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 9

Conread position: 241-413
Cow position: chr3:39325082-39325259 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 11

Conread position: 261-416
Cow position: chr3:64359954-64359791 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 39

Conread position: 262-416
Cow position: chr3:52866405-52866252 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 16

Conread position: 263-418
Cow position: chr3:15056032-15055880 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 68

Conread position: 265-413
Cow position: chr3:17949910-17950057 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 25

Conread position: 280-416
Cow position: chr3:3908599-3908462 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 95

Conread position: 248-416
Cow position: chr4:1466216-1466046 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 128

Conread position: 251-416
Cow position: chr4:34186638-34186478 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 11

Conread position: 263-413
Cow position: chr4:4167707-4167857 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 136, 111

Conread position: 263-416
Cow position: chr4:21344292-21344140 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 75

Conread position: 276-416
Cow position: chr4:1372977-1372835 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 103

Conread position: 251-417
Cow position: chr5:6527179-6527345 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 12, 39

Conread position: 276-416
Cow position: chr5:61275212-61275068 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 100

Conread position: 281-401
Cow position: chr5:49595206-49595083 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 18

Conread position: 258-416
Cow position: chr6:10638984-10639146 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 118

Conread position: 261-414
Cow position: chr6:38230692-38230848 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 98

Conread position: 262-416
Cow position: chr6:11167599-11167753 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 13

Conread position: 273-416
Cow position: chr6:6478043-6477897 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 102

Conread position: 276-439
Cow position: chr6:47957544-47957712 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 106

Conread position: 203-416
Cow position: chr7:53364489-53364280 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 28

Conread position: 264-412
Cow position: chr7:30157859-30157701 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 121

Conread position: 265-415
Cow position: chr7:35289203-35289053 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 102

Conread position: 276-421
Cow position: chr7:21309398-21309550 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 107

Conread position: 262-397
Cow position: chr8:53416411-53416274 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 111

Conread position: 264-416
Cow position: chr8:3337246-3337398 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 115

Conread position: 265-416
Cow position: chr8:54825730-54825571 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 265-413
Cow position: chr9:5028325-5028475 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 112

Conread position: 256-416
Cow position: chrX:42451234-42451086 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 85

Conread position: 265-416
Cow position: chrX:31033685-31033840 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 111

Conread position: 267-416
Cow position: chrX:24123799-24123645 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0