Cow genome map
| Conread name: | rcov08b_g20.y1 |
| Conread position: | 185-597 |
| Cow position: | chr1:43452709-43452297 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 164, 136 |
| Conread position: | 233-597 |
| Cow position: | chr1:72999474-72999839 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 317, 0 |
| Conread position: | 190-597 |
| Cow position: | chr10:49576519-49576929 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 149, 138 |
| Conread position: | 1-596 |
| Cow position: | chr12:48464035-48464654 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 185-597 |
| Cow position: | chr12:36191257-36190845 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-597 |
| Cow position: | chr13:60611540-60612022 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 185-597 |
| Cow position: | chr13:30334624-30335024 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 218-597 |
| Cow position: | chr13:57445509-57445888 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-596 |
| Cow position: | chr15:22547610-22547038 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-597 |
| Cow position: | chr16:42016120-42015712 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 281-413 |
| Cow position: | chr16:17938127-17938262 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-596 |
| Cow position: | chr17:18745713-18746317 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 281-597 |
| Cow position: | chr17:11243258-11242940 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 49-563 |
| Cow position: | chr18:50297966-50298465 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 236-462 |
| Cow position: | chr20:38066545-38066337 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 12-592 |
| Cow position: | chr21:30160295-30159707 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 185-597 |
| Cow position: | chr21:47003355-47002943 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-595 |
| Cow position: | chr23:22235728-22236057 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 296, 72 |
| Conread position: | 185-589 |
| Cow position: | chr24:38465831-38465429 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 178, 143 |
| Conread position: | 218-582 |
| Cow position: | chr28:25598919-25598553 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 205 |
| Conread position: | 1-281 |
| Cow position: | chr29:31523581-31523885 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 258-597 |
| Cow position: | chr29:25664395-25664735 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 281-428 |
| Cow position: | chr29:31525240-31525387 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 396-596 |
| Cow position: | chr29:14578214-14578404 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 427-560 |
| Cow position: | chr29:31525675-31525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-127 |
| Cow position: | chr3:5120738-5120609 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 71-597 |
| Cow position: | chr3:5120692-5120182 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 161-595 |
| Cow position: | chr3:75190048-75190482 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 206 |
| Conread position: | 185-597 |
| Cow position: | chr3:27172191-27171778 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 191, 66 |
| Conread position: | 197-551 |
| Cow position: | chr3:79273976-79274317 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 265, 39 |
| Conread position: | 218-597 |
| Cow position: | chr3:43331702-43331323 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 115 |
| Conread position: | 186-597 |
| Cow position: | chr4:44409343-44408931 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 155, 72 |
| Conread position: | 162-597 |
| Cow position: | chr9:42068506-42068068 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 212 |
| Conread position: | 185-597 |
| Cow position: | chr9:51909251-51908838 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 1-596 |
| Cow position: | chrX:17102480-17101852 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 388-597 |
| Cow position: | chrX:13392375-13392159 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 162 |