Cow genome map
| Conread name: | rcut32_j6.y1 |
| Conread position: | 8-252 |
| Cow position: | chr10:35612272-35612517 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 23-315 |
| Cow position: | chr10:30564339-30564634 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 27-229 |
| Cow position: | chr10:57871760-57871547 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 132-325 |
| Cow position: | chr10:37485161-37484961 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 16-318 |
| Cow position: | chr11:20420285-20419959 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 26-370 |
| Cow position: | chr11:52331881-52331533 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 125-318 |
| Cow position: | chr11:61158717-61158920 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 25-299 |
| Cow position: | chr12:7463630-7463904 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 26-319 |
| Cow position: | chr12:24530884-24530590 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 108-362 |
| Cow position: | chr12:16374993-16375251 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 1-292 |
| Cow position: | chr13:25781468-25781172 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 18-295 |
| Cow position: | chr13:39752489-39752769 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 89-360 |
| Cow position: | chr13:47846028-47845762 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 133-308 |
| Cow position: | chr14:29787842-29787664 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 16-227 |
| Cow position: | chr15:27771576-27771358 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 9-341 |
| Cow position: | chr16:14419506-14419172 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 23-295 |
| Cow position: | chr16:36926502-36926771 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 32-392 |
| Cow position: | chr16:40695593-40695213 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 68-395 |
| Cow position: | chr16:46045594-46045924 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 97-319 |
| Cow position: | chr16:19362364-19362588 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 43-370 |
| Cow position: | chr17:18280058-18280400 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 1-321 |
| Cow position: | chr18:7686796-7687126 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 22-384 |
| Cow position: | chr18:24260206-24259848 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 23-197 |
| Cow position: | chr18:2121886-2122064 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 26-229 |
| Cow position: | chr19:23593018-23593219 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 34-319 |
| Cow position: | chr20:21192776-21192490 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 16-306 |
| Cow position: | chr22:40043532-40043829 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 15-318 |
| Cow position: | chr23:29064080-29064392 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 23-308 |
| Cow position: | chr23:14735339-14735624 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 28-372 |
| Cow position: | chr23:16930013-16930362 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 58-319 |
| Cow position: | chr23:18217825-18218092 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 17-267 |
| Cow position: | chr24:27116522-27116273 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 35-360 |
| Cow position: | chr24:25180214-25179884 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 17-231 |
| Cow position: | chr25:32525170-32525390 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 7-285 |
| Cow position: | chr26:23595931-23595656 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 8-286 |
| Cow position: | chr26:10469684-10469971 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 23-190 |
| Cow position: | chr26:20352255-20352424 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 23-244 |
| Cow position: | chr26:21359015-21358788 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 73-227 |
| Cow position: | chr26:12034180-12034024 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-319 |
| Cow position: | chr28:16867393-16867700 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 23-325 |
| Cow position: | chr28:23341309-23341012 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 5-229 |
| Cow position: | chr7:30472743-30472521 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 15-614 |
| Cow position: | chr7:59842156-59842758 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 37 |
| Conread position: | 25-381 |
| Cow position: | chr7:1203727-1204083 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 25-400 |
| Cow position: | chr7:43084792-43084412 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 55-370 |
| Cow position: | chr7:31978512-31978837 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 222 |
| Conread position: | 64-395 |
| Cow position: | chr7:44563183-44562856 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 23-287 |
| Cow position: | chr8:56475823-56475559 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 121-364 |
| Cow position: | chr8:56085061-56084812 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 2-295 |
| Cow position: | chr9:33763714-33763415 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 25-352 |
| Cow position: | chr9:27673317-27673656 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 126-359 |
| Cow position: | chr9:15763111-15762874 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 202 |
| Conread position: | 128-341 |
| Cow position: | chr9:4832897-4833105 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 15-318 |
| Cow position: | chrX:19814661-19814341 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 16-295 |
| Cow position: | chrX:26688738-26688451 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 49 |