Cow genome map
| Conread name: | rebs28c_a12.y1 |
| Conread position: | 338-606 |
| Cow position: | chr1:89111261-89110992 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 357-616 |
| Cow position: | chr1:30439469-30439211 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 388-602 |
| Cow position: | chr1:99980911-99980698 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 6-232 |
| Cow position: | chr10:19181021-19180785 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 383-596 |
| Cow position: | chr10:20936241-20936457 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 387-669 |
| Cow position: | chr10:19179607-19179341 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 61 |
| Conread position: | 394-606 |
| Cow position: | chr10:2118414-2118627 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 408-604 |
| Cow position: | chr10:24309599-24309794 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 385-598 |
| Cow position: | chr11:42337688-42337901 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 400-598 |
| Cow position: | chr12:27515187-27514992 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 430-592 |
| Cow position: | chr12:31136047-31135887 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 370-606 |
| Cow position: | chr13:4486201-4485964 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 465-596 |
| Cow position: | chr14:19205713-19205580 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 394-606 |
| Cow position: | chr15:38982848-38982635 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 381-598 |
| Cow position: | chr16:2200865-2200655 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 499-598 |
| Cow position: | chr16:45800512-45800413 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-598 |
| Cow position: | chr17:13200951-13200735 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 388-596 |
| Cow position: | chr17:37459807-37459596 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 416-598 |
| Cow position: | chr18:9661326-9661146 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 394-606 |
| Cow position: | chr19:39393150-39392937 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 424-583 |
| Cow position: | chr20:6870704-6870863 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 394-622 |
| Cow position: | chr21:21622991-21622769 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 401-598 |
| Cow position: | chr22:14088439-14088636 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 37 |
| Conread position: | 394-606 |
| Cow position: | chr23:22144768-22144980 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 404-598 |
| Cow position: | chr23:15946753-15946567 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 383-568 |
| Cow position: | chr26:9457965-9457782 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 388-612 |
| Cow position: | chr26:22531780-22532005 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 400-611 |
| Cow position: | chr27:23905337-23905123 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 368-606 |
| Cow position: | chr28:24591478-24591238 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 381-597 |
| Cow position: | chr28:29677484-29677263 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 384-606 |
| Cow position: | chr29:2464312-2464535 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 370-606 |
| Cow position: | chr3:56337465-56337702 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 71 |
| Conread position: | 394-598 |
| Cow position: | chr3:49734034-49733828 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 380-598 |
| Cow position: | chr4:39933648-39933433 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 383-634 |
| Cow position: | chr4:12454339-12454078 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 388-598 |
| Cow position: | chr4:68044956-68045160 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 405-596 |
| Cow position: | chr4:54036205-54036019 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 383-598 |
| Cow position: | chr5:50604953-50605173 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 368-606 |
| Cow position: | chr6:704751-704510 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 370-598 |
| Cow position: | chr7:24250975-24250750 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 415-597 |
| Cow position: | chr7:26386043-26385857 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 394-597 |
| Cow position: | chr8:2167734-2167939 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 383-602 |
| Cow position: | chr9:24723230-24723008 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 401-612 |
| Cow position: | chr9:50063495-50063716 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 374-598 |
| Cow position: | chrX:10418969-10419193 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 394-606 |
| Cow position: | chrX:21751314-21751527 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 401-598 |
| Cow position: | chrX:514853-514654 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 37 |