• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rebs29c_p4.y1
        

               
Conread position:
               
166-463
               

               
Cow position:
               
chr10:9010581-9010284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
152, 137
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr11:74554766-74554395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
286, 282
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr11:74554850-74554476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
92-510
               

               
Cow position:
               
chr11:74555018-74554601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 113
               

               
Conread position:
               
109-418
               

               
Cow position:
               
chr11:50368586-50368277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 284
               

               
Conread position:
               
120-491
               

               
Cow position:
               
chr11:74554907-74554535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
6, 284
               

               
Conread position:
               
188-553
               

               
Cow position:
               
chr11:50368591-50368223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 362
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr13:22124847-22125220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
215, 219
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr13:24162489-24162867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
92-471
               

               
Cow position:
               
chr13:24162657-24163036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
92-472
               

               
Cow position:
               
chr13:24163077-24163457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
196, 202
               

               
Conread position:
               
92-489
               

               
Cow position:
               
chr13:22124763-22125163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
196, 202
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr13:22125015-22125430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr13:24162741-24163156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
13-503
               

               
Cow position:
               
chr14:3061224-3060737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
39-502
               

               
Cow position:
               
chr14:433936-434393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
46-510
               

               
Cow position:
               
chr14:3061780-3061319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
313, 19
               

               
Conread position:
               
76-388
               

               
Cow position:
               
chr14:663411-663102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
87-472
               

               
Cow position:
               
chr14:663486-663102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
87-509
               

               
Cow position:
               
chr14:433810-434232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
89-463
               

               
Cow position:
               
chr14:680226-680599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
305, 10
               

               
Conread position:
               
91-466
               

               
Cow position:
               
chr14:3080170-3079795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-466
               

               
Cow position:
               
chr14:3080926-3080551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
268, 274
               

               
Conread position:
               
92-411
               

               
Cow position:
               
chr14:447930-448249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr14:3127597-3127271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-427
               

               
Cow position:
               
chr14:3080001-3079666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
209, 229
               

               
Conread position:
               
92-427
               

               
Cow position:
               
chr14:3155498-3155833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 110
               

               
Conread position:
               
92-436
               

               
Cow position:
               
chr14:3080085-3079741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
293, 305
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr14:680900-681249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-450
               

               
Cow position:
               
chr14:3061568-3061210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr14:3128101-3127731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr14:25895707-25896077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr14:3080337-3079966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
304, 293
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr14:25895119-25895490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
123, 139
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr14:25895455-25895826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr14:433899-434273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr14:3080421-3080047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
216, 225
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr14:3127933-3127559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr14:3155414-3155788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr14:25895371-25895746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr14:3127849-3127471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
219, 209
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr14:25895623-25896001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 144
               

               
Conread position:
               
92-478
               

               
Cow position:
               
chr14:3156155-3156543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
92-493
               

               
Cow position:
               
chr14:3061232-3060831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
206, 217
               

               
Conread position:
               
92-501
               

               
Cow position:
               
chr14:25895035-25895444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
222, 206
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr14:447678-448089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr14:3080253-3079842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
223, 212
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr14:25895791-25896202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
92-504
               

               
Cow position:
               
chr14:3061064-3060652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr14:3061316-3060901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr14:3080757-3080342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr14:25895287-25895702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr14:25894951-25895368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
165, 152
               

               
Conread position:
               
92-510
               

               
Cow position:
               
chr14:447594-448011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 225
               

               
Conread position:
               
92-510
               

               
Cow position:
               
chr14:3061484-3061067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
220, 214
               

               
Conread position:
               
92-531
               

               
Cow position:
               
chr14:3080589-3080151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
413, 0
               

               
Conread position:
               
94-454
               

               
Cow position:
               
chr14:447764-448124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
94-456
               

               
Cow position:
               
chr14:680734-681096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
291, 299
               

               
Conread position:
               
94-463
               

               
Cow position:
               
chr14:680566-680935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chr14:447848-448220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
224, 209
               

               
Conread position:
               
94-503
               

               
Cow position:
               
chr14:3061650-3061241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
118, 128
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr14:680398-680811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr14:680482-680895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-510
               

               
Cow position:
               
chr14:3080503-3080088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
294, 302
               

               
Conread position:
               
98-491
               

               
Cow position:
               
chr14:680654-681047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
103-466
               

               
Cow position:
               
chr14:3080830-3080467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
291, 285
               

               
Conread position:
               
103-466
               

               
Cow position:
               
chr14:3156082-3156445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
218, 211
               

               
Conread position:
               
113-507
               

               
Cow position:
               
chr14:25895560-25895954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
151-463
               

               
Cow position:
               
chr14:25894926-25895238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr14:447570-447881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
230, 249
               

               
Conread position:
               
152-470
               

               
Cow position:
               
chr14:3127621-3127303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 152
               

               
Conread position:
               
170-503
               

               
Cow position:
               
chr14:447505-447837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
304, 5
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr14:663482-663155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
164, 8
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr14:3128164-3127858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr14:433775-434062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr15:48468776-48469308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 237
               

               
Conread position:
               
84-530
               

               
Cow position:
               
chr15:48468517-48468972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
251, 261
               

               
Conread position:
               
90-417
               

               
Cow position:
               
chr15:19138985-19138658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
301, 296
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr15:19139067-19138693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
92-495
               

               
Cow position:
               
chr15:19139151-19138748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
94-436
               

               
Cow position:
               
chr15:48468611-48468962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 167
               

               
Conread position:
               
171-463
               

               
Cow position:
               
chr15:48468436-48468728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
178-407
               

               
Cow position:
               
chr15:48468527-48468756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr17:44467690-44468207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
21-503
               

               
Cow position:
               
chr17:44467458-44467940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr17:44467374-44467860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
37-503
               

               
Cow position:
               
chr17:44467648-44468108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 14
               

               
Conread position:
               
55-503
               

               
Cow position:
               
chr17:41441068-41440623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 32
               

               
Conread position:
               
59-507
               

               
Cow position:
               
chr17:44467913-44468364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
73-463
               

               
Cow position:
               
chr17:41441138-41440747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 272
               

               
Conread position:
               
74-471
               

               
Cow position:
               
chr17:44467850-44468244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
75-352
               

               
Cow position:
               
chr17:44468103-44468377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
183, 7
               

               
Conread position:
               
75-434
               

               
Cow position:
               
chr17:44468019-44468375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
77-503
               

               
Cow position:
               
chr17:44467346-44467772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
84-532
               

               
Cow position:
               
chr17:41440622-41440175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
420, 0
               

               
Conread position:
               
87-490
               

               
Cow position:
               
chr17:41440702-41440300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr17:41440950-41440576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr17:41440782-41440371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-503
               

               
Cow position:
               
chr17:41440864-41440455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 165
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr17:44467615-44468028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
175-506
               

               
Cow position:
               
chr17:45350908-45350577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
178-466
               

               
Cow position:
               
chr17:41441116-41440828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 203
               

               
Conread position:
               
259-502
               

               
Cow position:
               
chr17:45350908-45350665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
262-507
               

               
Cow position:
               
chr17:41441116-41440871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr18:56267626-56267167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
10-503
               

               
Cow position:
               
chr18:56391501-56391014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 43
               

               
Conread position:
               
20-530
               

               
Cow position:
               
chr18:54668848-54668331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
21-529
               

               
Cow position:
               
chr18:56391580-56391071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
24-463
               

               
Cow position:
               
chr18:55497519-55497077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
28-514
               

               
Cow position:
               
chr18:47846578-47846089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 203
               

               
Conread position:
               
45-503
               

               
Cow position:
               
chr18:56391640-56391182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
67-504
               

               
Cow position:
               
chr18:56391279-56390845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr18:22843611-22843308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
75-457
               

               
Cow position:
               
chr18:22844042-22843656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr18:22844203-22843821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
84-507
               

               
Cow position:
               
chr18:55497624-55497201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 220
               

               
Conread position:
               
91-463
               

               
Cow position:
               
chr18:22844364-22843989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
92-383
               

               
Cow position:
               
chr18:53635702-53635411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 123
               

               
Conread position:
               
92-423
               

               
Cow position:
               
chr18:56329173-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
92-432
               

               
Cow position:
               
chr18:56391173-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
92-445
               

               
Cow position:
               
chr18:55497364-55497010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr18:49033124-49032755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
304, 295
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr18:53610125-53609755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
228, 222
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr18:56329929-56329560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 137
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr18:49032620-49032249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
302, 295
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr18:53610209-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr18:53635786-53635415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
215, 219
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr18:56316223-56316594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr18:56329341-56328970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
200, 194
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr18:55497532-55497160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr18:52012269-52011896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr18:56316643-56317016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
329, 340
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr18:56329761-56329388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr18:53610377-53610003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr18:53635534-53635159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr18:56128631-56129006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
92-469
               

               
Cow position:
               
chr18:53610461-53610084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr18:52012017-52011639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
92-474
               

               
Cow position:
               
chr18:56128463-56128844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
92-501
               

               
Cow position:
               
chr18:53635450-53635041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
303, 296
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:22844279-22843865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:42724414-42724003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:49033292-49032881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
225, 206
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:56128295-56128706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
268, 278
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:56329425-56329014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:56329509-56329098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
293, 313
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:56329677-56329266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
296, 289
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr18:56329845-56329434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
302, 293
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr18:53635870-53635455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 110
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr18:56128127-56128542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr18:56330181-56329766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr18:42724498-42724081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 157
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr18:49033208-49032791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 152
               

               
Conread position:
               
92-523
               

               
Cow position:
               
chr18:56316559-56316987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
417, 0
               

               
Conread position:
               
94-360
               

               
Cow position:
               
chr18:56391894-56391631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
242, 0
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr18:47846341-47846013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
94-502
               

               
Cow position:
               
chr18:47846425-47846017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
265, 269
               

               
Conread position:
               
94-503
               

               
Cow position:
               
chr18:56329591-56329182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
300, 293
               

               
Conread position:
               
94-505
               

               
Cow position:
               
chr18:47846593-47846182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
95-462
               

               
Cow position:
               
chr18:47846676-47846310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
97-442
               

               
Cow position:
               
chr18:55497695-55497350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
303, 290
               

               
Conread position:
               
108-457
               

               
Cow position:
               
chr18:56316071-56316420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr18:56391963-56391629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 284
               

               
Conread position:
               
110-463
               

               
Cow position:
               
chr18:52012335-52011982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-493
               

               
Cow position:
               
chr18:50281950-50282333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
364, 370
               

               
Conread position:
               
140-467
               

               
Cow position:
               
chr18:44818526-44818851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
145-457
               

               
Cow position:
               
chr18:49033323-49033011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
162, 177
               

               
Conread position:
               
151-463
               

               
Cow position:
               
chr18:56128438-56128750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
156, 160
               

               
Conread position:
               
151-499
               

               
Cow position:
               
chr18:44817890-44818238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
161, 147
               

               
Conread position:
               
152-489
               

               
Cow position:
               
chr18:50281824-50282164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
152-531
               

               
Cow position:
               
chr18:47846703-47846323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
159-507
               

               
Cow position:
               
chr18:53610480-53610130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
162-463
               

               
Cow position:
               
chr18:55497714-55497413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
150, 142
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr18:22844028-22843737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 149
               

               
Conread position:
               
179-506
               

               
Cow position:
               
chr18:22843591-22843265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
179-529
               

               
Cow position:
               
chr18:56391590-56391239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 214
               

               
Conread position:
               
181-424
               

               
Cow position:
               
chr18:54687753-54687996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
188-553
               

               
Cow position:
               
chr18:56391968-56391600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 362
               

               
Conread position:
               
194-495
               

               
Cow position:
               
chr18:49033358-49033057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
202, 188
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr18:50281824-50282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
247-501
               

               
Cow position:
               
chr18:44817818-44818072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
137, 145
               

               
Conread position:
               
250-463
               

               
Cow position:
               
chr18:54687738-54687951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
250-507
               

               
Cow position:
               
chr18:55497710-55497453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 138
               

               
Conread position:
               
254-523
               

               
Cow position:
               
chr18:54670267-54669994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
262-462
               

               
Cow position:
               
chr18:56128129-56128329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
281-445
               

               
Cow position:
               
chr18:54664112-54664276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-502
               

               
Cow position:
               
chr18:54669622-54669425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-456
               

               
Cow position:
               
chr19:23649476-23649840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
212, 220
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr19:23649392-23649766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr19:23649308-23649725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 118
               

               
Conread position:
               
175-533
               

               
Cow position:
               
chr19:17615103-17615462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
24-466
               

               
Cow position:
               
chr21:12659017-12659462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
91-251
               

               
Cow position:
               
chr21:12659843-12660003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr21:12659676-12660002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr21:12608506-12608135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr21:12608758-12608385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 131
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr21:12659340-12659714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 209
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr21:12659424-12659798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 184
               

               
Conread position:
               
92-467
               

               
Cow position:
               
chr21:12659256-12659631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-469
               

               
Cow position:
               
chr21:12658836-12659213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr21:12659592-12659970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 210
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr21:12659004-12659415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 211
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr21:12659172-12659583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr21:12659508-12659925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 100
               

               
Conread position:
               
94-463
               

               
Cow position:
               
chr21:12608420-12608051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
220, 203
               

               
Conread position:
               
94-465
               

               
Cow position:
               
chr21:12608336-12607965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
288, 303
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chr21:12608840-12608468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
97-471
               

               
Cow position:
               
chr21:12658925-12659299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 205
               

               
Conread position:
               
110-463
               

               
Cow position:
               
chr21:12608908-12608555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
294, 288
               

               
Conread position:
               
110-472
               

               
Cow position:
               
chr21:34222946-34222585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
211, 204
               

               
Conread position:
               
143-466
               

               
Cow position:
               
chr21:12658803-12659126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 156
               

               
Conread position:
               
187-458
               

               
Cow position:
               
chr21:12608915-12608644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 123
               

               
Conread position:
               
92-491
               

               
Cow position:
               
chr22:12418855-12418456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
173-462
               

               
Cow position:
               
chr22:11640859-11641147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
209, 221
               

               
Conread position:
               
141-462
               

               
Cow position:
               
chr23:24639521-24639841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
4-502
               

               
Cow position:
               
chr25:3675905-3676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 362
               

               
Conread position:
               
8-502
               

               
Cow position:
               
chr25:33529977-33530474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
16-463
               

               
Cow position:
               
chr25:33530324-33530771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
47-503
               

               
Cow position:
               
chr25:33530105-33530559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
48-430
               

               
Cow position:
               
chr25:3636349-3635969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
55-519
               

               
Cow position:
               
chr25:3664068-3664528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 27
               

               
Conread position:
               
68-504
               

               
Cow position:
               
chr25:24385098-24384666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr25:4657308-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
75-465
               

               
Cow position:
               
chr25:3636405-3636018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
75-470
               

               
Cow position:
               
chr25:3636489-3636097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
285, 7
               

               
Conread position:
               
76-451
               

               
Cow position:
               
chr25:25652174-25652550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 307
               

               
Conread position:
               
76-463
               

               
Cow position:
               
chr25:25652762-25653150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
76-466
               

               
Cow position:
               
chr25:3664001-3664392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 307
               

               
Conread position:
               
76-495
               

               
Cow position:
               
chr25:25652426-25652846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
76-503
               

               
Cow position:
               
chr25:25652342-25652770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
77-411
               

               
Cow position:
               
chr25:25653019-25653347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
244, 8
               

               
Conread position:
               
77-466
               

               
Cow position:
               
chr25:34473495-34473881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
79-529
               

               
Cow position:
               
chr25:33506736-33507189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 438
               

               
Conread position:
               
81-503
               

               
Cow position:
               
chr25:24385425-24385002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
83-529
               

               
Cow position:
               
chr25:3663925-3664372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 386
               

               
Conread position:
               
84-422
               

               
Cow position:
               
chr25:3664262-3664600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-386
               

               
Cow position:
               
chr25:326498-326794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
91-466
               

               
Cow position:
               
chr25:33529100-33529475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
294, 312
               

               
Conread position:
               
92-313
               

               
Cow position:
               
chr25:34733922-34733701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-380
               

               
Cow position:
               
chr25:22236000-22236288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-406
               

               
Cow position:
               
chr25:33530484-33530798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
206, 229
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr25:3664186-3664556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
209, 214
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr25:36844617-36844255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chr25:34763000-34763370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
290, 125
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr25:4657462-4657088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 212
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr25:33157386-33157012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
225, 210
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chr25:33157218-33156840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 60
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr25:25652695-25653106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 206
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr25:24385161-24384745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr25:25652611-25653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 211
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr25:34473594-34474006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
271, 0
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr25:34763249-34763661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr25:23267493-23267083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
92-519
               

               
Cow position:
               
chr25:25652527-25652953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 295
               

               
Conread position:
               
92-548
               

               
Cow position:
               
chr25:33530316-33530768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 289
               

               
Conread position:
               
94-432
               

               
Cow position:
               
chr25:4657376-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
227, 220
               

               
Conread position:
               
94-457
               

               
Cow position:
               
chr25:22941372-22941009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
94-463
               

               
Cow position:
               
chr25:25652949-25653318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-463
               

               
Cow position:
               
chr25:34473680-34474046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
136, 144
               

               
Conread position:
               
94-471
               

               
Cow position:
               
chr25:25652277-25652654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 204
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr25:3636557-3636144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr25:34762918-34763328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
95-466
               

               
Cow position:
               
chr25:25652866-25653237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
102-518
               

               
Cow position:
               
chr25:33529027-33529442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
403, 0
               

               
Conread position:
               
110-407
               

               
Cow position:
               
chr25:34733988-34733691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
113-507
               

               
Cow position:
               
chr25:22235853-22236247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
373, 359
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr25:33157524-33157143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
274, 266
               

               
Conread position:
               
140-466
               

               
Cow position:
               
chr25:34763129-34763455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
254, 245
               

               
Conread position:
               
143-465
               

               
Cow position:
               
chr25:22940545-22940224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
164-463
               

               
Cow position:
               
chr25:326486-326787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
168-463
               

               
Cow position:
               
chr25:22941382-22941087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
171-531
               

               
Cow position:
               
chr25:33530059-33530418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
334, 0
               

               
Conread position:
               
173-503
               

               
Cow position:
               
chr25:25652188-25652518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
176-503
               

               
Cow position:
               
chr25:3636559-3636232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-470
               

               
Cow position:
               
chr25:4657460-4657168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 126
               

               
Conread position:
               
178-507
               

               
Cow position:
               
chr25:34473512-34473841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 129
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr25:34733988-34733719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr25:34734022-34733757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
252-467
               

               
Cow position:
               
chr25:25652183-25652398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 130
               

               
Conread position:
               
252-503
               

               
Cow position:
               
chr25:3675986-3676238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
260-463
               

               
Cow position:
               
chr25:3636559-3636356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-463
               

               
Cow position:
               
chr25:33506717-33506870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr28:34695915-34696286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr28:34696083-34696457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
240, 233
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr28:34695999-34696410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 68
               

               
Conread position:
               
92-504
               

               
Cow position:
               
chr28:34696167-34696579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 149
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:65546440-65546181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:65121697-65122130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:65702885-65702452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr4:65350292-65350792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
8-503
               

               
Cow position:
               
chr4:65350049-65350540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
19-545
               

               
Cow position:
               
chr4:65703656-65703135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
20-453
               

               
Cow position:
               
chr4:65146350-65146785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
36-340
               

               
Cow position:
               
chr4:65157882-65158182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
55-472
               

               
Cow position:
               
chr4:65121586-65122000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
59-509
               

               
Cow position:
               
chr4:65349928-65350381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
61-472
               

               
Cow position:
               
chr4:65702905-65702495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
66-507
               

               
Cow position:
               
chr4:65703438-65703000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
70-507
               

               
Cow position:
               
chr4:65350029-65350463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
71-421
               

               
Cow position:
               
chr4:65350450-65350794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
75-524
               

               
Cow position:
               
chr4:65121690-65122136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 7
               

               
Conread position:
               
76-345
               

               
Cow position:
               
chr4:65546445-65546181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
76-507
               

               
Cow position:
               
chr4:65350203-65350628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
79-280
               

               
Cow position:
               
chr4:65495307-65495107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
79-519
               

               
Cow position:
               
chr4:65495035-65494590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 432
               

               
Conread position:
               
81-552
               

               
Cow position:
               
chr4:65261564-65261089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 449
               

               
Conread position:
               
82-503
               

               
Cow position:
               
chr4:65261730-65261306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr4:65703664-65703253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-427
               

               
Cow position:
               
chr4:65494762-65494429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-503
               

               
Cow position:
               
chr4:65261630-65261222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
99-529
               

               
Cow position:
               
chr4:65121543-65121973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
112-535
               

               
Cow position:
               
chr4:65494828-65494400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 145
               

               
Conread position:
               
159-429
               

               
Cow position:
               
chr4:65546450-65546181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
170-548
               

               
Cow position:
               
chr4:65401864-65402247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
171-536
               

               
Cow position:
               
chr4:65157836-65158209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 361
               

               
Conread position:
               
172-472
               

               
Cow position:
               
chr4:65703668-65703368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 136
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr4:65702878-65702544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
138, 113
               

               
Conread position:
               
173-548
               

               
Cow position:
               
chr4:65146420-65146792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
247, 263
               

               
Conread position:
               
229-546
               

               
Cow position:
               
chr4:65495326-65495007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 191
               

               
Conread position:
               
249-519
               

               
Cow position:
               
chr4:65703676-65703406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
252-541
               

               
Cow position:
               
chr4:65702883-65702592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
253-472
               

               
Cow position:
               
chr4:65121136-65121355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-489
               

               
Cow position:
               
chr4:65146417-65146655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
328-551
               

               
Cow position:
               
chr4:65546365-65546142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
333-503
               

               
Cow position:
               
chr4:65121132-65121302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-507
               

               
Cow position:
               
chr6:49428409-49428898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 220
               

               
Conread position:
               
75-466
               

               
Cow position:
               
chr6:49428805-49429193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
75-507
               

               
Cow position:
               
chr6:49428721-49429150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
75-519
               

               
Cow position:
               
chr6:49428973-49429413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
92-423
               

               
Cow position:
               
chr6:49429155-49429486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
293, 308
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr6:49429071-49429445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
230, 222
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr6:49428315-49428726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 101
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr6:49428399-49428810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr6:49428567-49428978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 40
               

               
Conread position:
               
92-503
               

               
Cow position:
               
chr6:49428903-49429314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-507
               

               
Cow position:
               
chr6:49428651-49429066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-510
               

               
Cow position:
               
chr6:49428231-49428648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 184
               

               
Conread position:
               
19-503
               

               
Cow position:
               
chr7:12293284-12293762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-509
               

               
Cow position:
               
chr7:12293246-12293684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
67-543
               

               
Cow position:
               
chr7:12293581-12294058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
321, 18
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr7:12293519-12293889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-463
               

               
Cow position:
               
chr7:28846594-28846965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
94-528
               

               
Cow position:
               
chr7:12293437-12293872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
216, 205
               

               
Conread position:
               
176-507
               

               
Cow position:
               
chr7:12293267-12293598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
92-450
               

               
Cow position:
               
chrX:13826525-13826167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
92-465
               

               
Cow position:
               
chrX:14181471-14181098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chrX:13826693-13826319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chrX:13826777-13826360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chrX:14181385-14181013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
217, 210
               

               
Conread position:
               
140-509
               

               
Cow position:
               
chrX:13826897-13826528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
152-503
               

               
Cow position:
               
chrX:13826801-13826450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 138
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chrX:13826952-13826612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
120, 133