Cow genome map

Conread name: rebs31c_k1.y1

Conread position: 1-356
Cow position: chr1:1827553-1827204 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 100

Conread position: 1-384
Cow position: chr1:73763345-73762960 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 1-592
Cow position: chr1:53422139-53422758 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 217

Conread position: 1-592
Cow position: chr1:86704400-86705006 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-600
Cow position: chr1:29364656-29365272 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 1-601
Cow position: chr1:90606607-90606005 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 167

Conread position: 1-607
Cow position: chr1:41518563-41517959 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 1-607
Cow position: chr1:86612356-86612967 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 102

Conread position: 3-552
Cow position: chr1:52918201-52917640 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 12

Conread position: 3-592
Cow position: chr1:88267852-88267272 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 75

Conread position: 9-607
Cow position: chr1:29949544-29948944 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 129

Conread position: 10-350
Cow position: chr1:58198132-58197780 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 210

Conread position: 10-396
Cow position: chr1:4275886-4276267 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 84

Conread position: 10-474
Cow position: chr1:62100546-62100082 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 73

Conread position: 10-589
Cow position: chr1:57695395-57694785 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 10-592
Cow position: chr1:40510980-40510399 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 21

Conread position: 11-447
Cow position: chr1:65388543-65388995 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 169

Conread position: 11-471
Cow position: chr1:8827323-8827799 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-549
Cow position: chr1:30693341-30693887 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 81

Conread position: 11-591
Cow position: chr1:74284413-74283813 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 92

Conread position: 11-592
Cow position: chr1:38477573-38478161 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 196

Conread position: 11-592
Cow position: chr1:68603366-68602769 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 46

Conread position: 11-600
Cow position: chr1:93856781-93857386 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 20-606
Cow position: chr1:99108968-99108363 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 173

Conread position: 21-339
Cow position: chr1:30439116-30439438 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 194

Conread position: 21-559
Cow position: chr1:77464379-77464902 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 21-592
Cow position: chr1:5504208-5504796 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 185

Conread position: 21-592
Cow position: chr1:40533759-40533214 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 61

Conread position: 21-607
Cow position: chr1:36539783-36540380 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 37

Conread position: 22-354
Cow position: chr1:82368020-82368356 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 141

Conread position: 22-384
Cow position: chr1:99017787-99017428 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 119

Conread position: 22-593
Cow position: chr1:31192111-31191552 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 48

Conread position: 24-380
Cow position: chr1:23054695-23055052 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 156

Conread position: 40-574
Cow position: chr1:92008218-92007679 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 109

Conread position: 42-562
Cow position: chr1:28568414-28567886 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 87

Conread position: 104-544
Cow position: chr1:79913305-79913753 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 105-606
Cow position: chr1:53310285-53309778 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 107-600
Cow position: chr1:46838154-46838662 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 115-592
Cow position: chr1:61537635-61537142 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 131-396
Cow position: chr1:93517275-93517546 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 19, 119

Conread position: 153-600
Cow position: chr1:70069064-70069529 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 166-607
Cow position: chr1:39481525-39481064 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 183-356
Cow position: chr1:87967627-87967457 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 22

Conread position: 194-607
Cow position: chr1:48827114-48827547 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 12

Conread position: 198-607
Cow position: chr1:82863263-82863690 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 199-607
Cow position: chr1:44949721-44950134 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 7

Conread position: 225-579
Cow position: chr1:11017872-11018237 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 212

Conread position: 245-527
Cow position: chr1:53208867-53208572 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 104

Conread position: 259-591
Cow position: chr1:42553870-42554198 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 270-592
Cow position: chr1:70863558-70863890 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 89

Conread position: 289-607
Cow position: chr1:75832577-75832902 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 68

Conread position: 292-607
Cow position: chr1:81374468-81374136 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 310-569
Cow position: chr1:32629512-32629774 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 45

Conread position: 1-592
Cow position: chr10:31526009-31526589 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 1-600
Cow position: chr10:25564280-25563667 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 166

Conread position: 7-569
Cow position: chr10:53318506-53317930 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 58

Conread position: 9-384
Cow position: chr10:14865149-14865514 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 66

Conread position: 10-522
Cow position: chr10:41149437-41148929 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 58

Conread position: 10-538
Cow position: chr10:15831784-15831250 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 151

Conread position: 10-607
Cow position: chr10:4500248-4500848 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 111

Conread position: 10-607
Cow position: chr10:15621099-15620491 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 198

Conread position: 11-384
Cow position: chr10:20268409-20268034 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 196

Conread position: 11-592
Cow position: chr10:38842449-38843048 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 21-607
Cow position: chr10:33425252-33424655 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 148

Conread position: 22-393
Cow position: chr10:64220165-64219813 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 291, 126

Conread position: 22-607
Cow position: chr10:40642237-40642836 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 185

Conread position: 24-607
Cow position: chr10:21897348-21896750 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 114

Conread position: 49-565
Cow position: chr10:27786930-27787462 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 167

Conread position: 52-384
Cow position: chr10:19608013-19607695 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 241, 23

Conread position: 129-607
Cow position: chr10:26670076-26670564 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 71

Conread position: 172-592
Cow position: chr10:49430092-49430525 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 245-607
Cow position: chr10:34665244-34664872 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 250-396
Cow position: chr10:25073372-25073224 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 110

Conread position: 262-550
Cow position: chr10:44292926-44292637 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 96

Conread position: 291-607
Cow position: chr10:58939080-58938744 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 1-592
Cow position: chr11:8265430-8266049 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 181

Conread position: 1-592
Cow position: chr11:22934680-22934078 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 167

Conread position: 1-600
Cow position: chr11:38575575-38574955 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 209

Conread position: 1-607
Cow position: chr11:59627422-59626801 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 2-379
Cow position: chr11:64384833-64385211 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 98

Conread position: 2-592
Cow position: chr11:49172589-49171981 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 10-396
Cow position: chr11:12095714-12096105 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 91

Conread position: 10-573
Cow position: chr11:85732108-85731516 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 124

Conread position: 10-592
Cow position: chr11:15994092-15994679 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 36

Conread position: 10-607
Cow position: chr11:4054375-4053777 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 35

Conread position: 10-607
Cow position: chr11:7109486-7108889 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 197

Conread position: 10-607
Cow position: chr11:28392811-28393427 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 84

Conread position: 10-607
Cow position: chr11:73467506-73466886 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 208

Conread position: 11-592
Cow position: chr11:19100561-19099964 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr11:42371741-42372344 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 171

Conread position: 11-592
Cow position: chr11:44253999-44254594 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 159

Conread position: 11-607
Cow position: chr11:2834203-2834810 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 111

Conread position: 14-384
Cow position: chr11:21137979-21138334 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 205, 24

Conread position: 14-606
Cow position: chr11:4061933-4061358 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 20-607
Cow position: chr11:21897748-21897157 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 33

Conread position: 22-524
Cow position: chr11:39805650-39806161 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 159

Conread position: 22-593
Cow position: chr11:74346349-74346926 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 68

Conread position: 96-524
Cow position: chr11:46778482-46778046 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 124

Conread position: 154-384
Cow position: chr11:14735275-14735045 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 52

Conread position: 184-607
Cow position: chr11:34022074-34022482 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 22

Conread position: 185-355
Cow position: chr11:65159796-65159967 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 21

Conread position: 250-606
Cow position: chr11:77435731-77436089 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 67

Conread position: 289-607
Cow position: chr11:17834363-17834041 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 133, 66

Conread position: 294-543
Cow position: chr11:33104682-33104939 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 63

Conread position: 310-545
Cow position: chr11:14468752-14468981 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 323-607
Cow position: chr11:54482131-54481842 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 32

Conread position: 1-380
Cow position: chr12:24979881-24980261 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 52

Conread position: 1-384
Cow position: chr12:3179570-3179952 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 166

Conread position: 1-543
Cow position: chr12:33926328-33925765 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-607
Cow position: chr12:30685939-30686558 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 194

Conread position: 10-555
Cow position: chr12:27514874-27515425 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 363
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 118, 22

Conread position: 10-592
Cow position: chr12:18466998-18467590 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 198

Conread position: 11-512
Cow position: chr12:251631-251116 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-542
Cow position: chr12:20461014-20460483 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chr12:11100455-11101051 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chr12:22592953-22593561 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 203

Conread position: 11-605
Cow position: chr12:22565274-22565856 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 196

Conread position: 12-600
Cow position: chr12:36212461-36213067 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 196

Conread position: 21-484
Cow position: chr12:28835107-28834624 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 186

Conread position: 22-605
Cow position: chr12:8143394-8142830 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 122

Conread position: 37-607
Cow position: chr12:1499382-1499967 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 73

Conread position: 51-600
Cow position: chr12:22747463-22748025 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 105

Conread position: 118-590
Cow position: chr12:6078791-6078310 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 53

Conread position: 1-605
Cow position: chr13:6440856-6441448 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 138

Conread position: 10-586
Cow position: chr13:26846487-26847060 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 111

Conread position: 11-384
Cow position: chr13:31508907-31509281 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 149

Conread position: 11-592
Cow position: chr13:34869960-34870554 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 57

Conread position: 11-592
Cow position: chr13:61953238-61953845 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-600
Cow position: chr13:33523960-33523354 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 196

Conread position: 20-592
Cow position: chr13:54144817-54145392 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 37

Conread position: 21-607
Cow position: chr13:22274818-22275411 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 187

Conread position: 29-538
Cow position: chr13:669261-669781 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 178

Conread position: 32-606
Cow position: chr13:21400860-21401454 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 148

Conread position: 41-496
Cow position: chr13:53544134-53543677 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 108

Conread position: 171-607
Cow position: chr13:5718469-5718044 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 249-607
Cow position: chr13:54312295-54312657 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 110

Conread position: 259-607
Cow position: chr13:11289513-11289861 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 99

Conread position: 260-579
Cow position: chr13:25881495-25881818 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 55

Conread position: 310-591
Cow position: chr13:25890681-25890961 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 97

Conread position: 1-588
Cow position: chr14:13861658-13861066 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 1-600
Cow position: chr14:19549055-19549671 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-600
Cow position: chr14:45027098-45026478 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 1-600
Cow position: chr14:46221938-46222558 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-607
Cow position: chr14:35364010-35363386 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 2-592
Cow position: chr14:46122988-46123582 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 207

Conread position: 10-592
Cow position: chr14:34041226-34040662 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 28

Conread position: 10-593
Cow position: chr14:46406185-46406800 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 11-384
Cow position: chr14:41272323-41271955 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 196

Conread position: 11-592
Cow position: chr14:11475419-11474830 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 196

Conread position: 11-592
Cow position: chr14:12741174-12740585 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 18-411
Cow position: chr14:31150202-31150600 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 32

Conread position: 20-592
Cow position: chr14:33678959-33679513 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 101

Conread position: 21-384
Cow position: chr14:34904234-34904599 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 164

Conread position: 21-384
Cow position: chr14:45236396-45236755 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 121

Conread position: 21-592
Cow position: chr14:47644244-47644843 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 37

Conread position: 21-607
Cow position: chr14:8899169-8899765 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 117

Conread position: 22-371
Cow position: chr14:38916209-38915879 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 99

Conread position: 22-607
Cow position: chr14:37256042-37256641 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 183

Conread position: 60-447
Cow position: chr14:13086876-13087261 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 89, 10

Conread position: 93-384
Cow position: chr14:31684732-31684438 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 114

Conread position: 96-607
Cow position: chr14:41766057-41766556 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 115-592
Cow position: chr14:45083655-45084129 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 331
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 7, 53

Conread position: 123-380
Cow position: chr14:47938983-47938737 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 193, 15

Conread position: 177-607
Cow position: chr14:49218374-49218809 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 192-396
Cow position: chr14:32733327-32733125 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 102, 14

Conread position: 192-607
Cow position: chr14:37335654-37335226 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 224-396
Cow position: chr14:20784950-20785122 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 21

Conread position: 249-593
Cow position: chr14:39299854-39300213 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 1-365
Cow position: chr15:8410898-8411262 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 209

Conread position: 1-384
Cow position: chr15:6382290-6381907 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 1-398
Cow position: chr15:29969486-29969100 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 1-512
Cow position: chr15:53322980-53323484 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 181

Conread position: 1-592
Cow position: chr15:4727065-4727675 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-600
Cow position: chr15:21534264-21533654 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 59

Conread position: 2-591
Cow position: chr15:7930436-7931039 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 10-383
Cow position: chr15:51911665-51911297 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 190

Conread position: 10-384
Cow position: chr15:17075550-17075174 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 101

Conread position: 10-514
Cow position: chr15:7964083-7963583 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 100

Conread position: 11-384
Cow position: chr15:3789547-3789903 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 207, 75

Conread position: 11-524
Cow position: chr15:7329889-7329380 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 196

Conread position: 11-592
Cow position: chr15:31363336-31363934 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 21-586
Cow position: chr15:49198309-49198895 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 24-600
Cow position: chr15:25131838-25132432 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 183

Conread position: 25-607
Cow position: chr15:6066624-6066041 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 116

Conread position: 28-606
Cow position: chr15:44298969-44298377 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 180

Conread position: 30-525
Cow position: chr15:37472668-37472163 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 11

Conread position: 38-600
Cow position: chr15:3891463-3892036 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 83

Conread position: 70-384
Cow position: chr15:4221202-4220887 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 206-423
Cow position: chr15:4827283-4827505 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 40

Conread position: 206-589
Cow position: chr15:13546983-13546582 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 207-538
Cow position: chr15:7056672-7057014 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 86, 35

Conread position: 247-607
Cow position: chr15:16514173-16514544 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 112

Conread position: 301-607
Cow position: chr15:11291581-11291277 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 9

Conread position: 1-527
Cow position: chr16:5891528-5892056 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 205

Conread position: 2-560
Cow position: chr16:52389892-52390453 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 352
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 118, 53

Conread position: 10-516
Cow position: chr16:23672133-23672649 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 198

Conread position: 10-607
Cow position: chr16:47475542-47476147 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 67

Conread position: 11-607
Cow position: chr16:25087139-25087744 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 90

Conread position: 12-592
Cow position: chr16:624904-625483 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 20-549
Cow position: chr16:44190384-44189882 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 21-484
Cow position: chr16:26652151-26652632 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 24-607
Cow position: chr16:42804297-42804881 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 176

Conread position: 28-550
Cow position: chr16:48103648-48104170 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 52

Conread position: 32-607
Cow position: chr16:41684742-41684165 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 34

Conread position: 36-403
Cow position: chr16:28435589-28435212 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 101

Conread position: 192-581
Cow position: chr16:2303832-2304237 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 193-591
Cow position: chr16:50875104-50874698 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 217-578
Cow position: chr16:7297986-7298358 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 28

Conread position: 245-592
Cow position: chr16:12161523-12161159 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 196

Conread position: 252-420
Cow position: chr16:23064234-23064048 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 71

Conread position: 268-607
Cow position: chr16:27007225-27007573 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 10

Conread position: 316-593
Cow position: chr16:28269007-28268724 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 165

Conread position: 316-607
Cow position: chr16:39364800-39364502 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 78, 39

Conread position: 1-352
Cow position: chr17:15720525-15720886 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 175

Conread position: 1-490
Cow position: chr17:136717-137229 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 133

Conread position: 1-591
Cow position: chr17:1705481-1706087 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 1-600
Cow position: chr17:451911-452528 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 167

Conread position: 1-600
Cow position: chr17:15709916-15709305 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-607
Cow position: chr17:8204013-8204632 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 98

Conread position: 1-607
Cow position: chr17:13706854-13707452 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 1-607
Cow position: chr17:27792691-27792079 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 10-530
Cow position: chr17:604969-604436 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 82

Conread position: 11-591
Cow position: chr17:15852797-15853408 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 249

Conread position: 11-592
Cow position: chr17:2176069-2176663 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 198

Conread position: 11-592
Cow position: chr17:20098215-20097634 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 67

Conread position: 11-607
Cow position: chr17:38828002-38828615 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 21-600
Cow position: chr17:3742260-3742857 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 21-607
Cow position: chr17:14233509-14232899 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 69

Conread position: 24-605
Cow position: chr17:240392-240982 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 148

Conread position: 25-365
Cow position: chr17:2170520-2170847 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 13

Conread position: 40-572
Cow position: chr17:36815816-36816337 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 57

Conread position: 55-565
Cow position: chr17:16903020-16903533 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 85

Conread position: 112-514
Cow position: chr17:14030658-14030237 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 79

Conread position: 118-586
Cow position: chr17:14393861-14394339 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 88

Conread position: 142-600
Cow position: chr17:17127189-17127664 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 197-589
Cow position: chr17:22562422-22562824 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 211-592
Cow position: chr17:18197159-18197554 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 257-607
Cow position: chr17:20094809-20094466 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 310-607
Cow position: chr17:3236563-3236848 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 142, 41

Conread position: 1-386
Cow position: chr18:40343979-40343594 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 190

Conread position: 10-592
Cow position: chr18:54026115-54026719 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 36

Conread position: 21-607
Cow position: chr18:37491142-37491721 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 21-607
Cow position: chr18:38091028-38090438 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 22

Conread position: 22-581
Cow position: chr18:17095126-17095701 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 182

Conread position: 22-607
Cow position: chr18:16558030-16558609 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 42

Conread position: 22-607
Cow position: chr18:17322724-17323314 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 99

Conread position: 52-607
Cow position: chr18:51273751-51273202 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 127

Conread position: 142-384
Cow position: chr18:47711566-47711807 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 15

Conread position: 161-607
Cow position: chr18:17671471-17671020 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 173-607
Cow position: chr18:22411861-22412312 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 208-607
Cow position: chr18:24452311-24452725 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 245-606
Cow position: chr18:969231-969609 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 1-592
Cow position: chr19:1584766-1585377 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 208

Conread position: 10-562
Cow position: chr19:39666236-39665709 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 50

Conread position: 10-607
Cow position: chr19:3089009-3088396 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 198

Conread position: 10-607
Cow position: chr19:40885433-40884819 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 154

Conread position: 21-607
Cow position: chr19:42297804-42297189 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 187

Conread position: 22-607
Cow position: chr19:42581961-42581365 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 120

Conread position: 183-484
Cow position: chr19:5901056-5901371 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 23

Conread position: 192-592
Cow position: chr19:40017079-40016677 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 292-607
Cow position: chr19:3113911-3114227 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 65

Conread position: 1-438
Cow position: chr2:70709288-70709740 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 209

Conread position: 1-591
Cow position: chr2:41952546-41953146 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 187

Conread position: 1-607
Cow position: chr2:5296029-5296640 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 151

Conread position: 2-592
Cow position: chr2:72791818-72791222 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 27

Conread position: 10-537
Cow position: chr2:27292042-27291515 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 75

Conread position: 10-579
Cow position: chr2:56896698-56896131 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 19

Conread position: 10-592
Cow position: chr2:44933263-44932675 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 136

Conread position: 11-557
Cow position: chr2:25744215-25744773 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr2:10467358-10467952 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 63

Conread position: 11-592
Cow position: chr2:36982410-36983007 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-600
Cow position: chr2:22079667-22080273 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 200

Conread position: 11-607
Cow position: chr2:33081994-33081399 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-607
Cow position: chr2:50405754-50406342 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 105

Conread position: 18-384
Cow position: chr2:3833745-3833386 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 129

Conread position: 18-606
Cow position: chr2:56800675-56800092 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 117

Conread position: 20-607
Cow position: chr2:74859748-74860338 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 186

Conread position: 21-606
Cow position: chr2:20918362-20917800 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 49

Conread position: 21-607
Cow position: chr2:2896853-2896276 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 40

Conread position: 21-607
Cow position: chr2:3788133-3787566 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 37

Conread position: 22-605
Cow position: chr2:6290683-6291279 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 83

Conread position: 26-607
Cow position: chr2:2206039-2205451 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 41

Conread position: 39-607
Cow position: chr2:1434069-1433494 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 43-591
Cow position: chr2:1201025-1200467 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 122

Conread position: 43-592
Cow position: chr2:16300554-16301110 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 23

Conread position: 57-607
Cow position: chr2:31455246-31455789 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 30

Conread position: 92-384
Cow position: chr2:16754125-16753841 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 183, 71

Conread position: 99-384
Cow position: chr2:31740212-31739933 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 128, 107

Conread position: 112-607
Cow position: chr2:14900279-14900775 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 148-592
Cow position: chr2:12285109-12285564 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 194-520
Cow position: chr2:52129621-52129284 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 52

Conread position: 244-606
Cow position: chr2:39115792-39116164 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 115

Conread position: 319-607
Cow position: chr2:33868812-33869099 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 108, 36

Conread position: 2-604
Cow position: chr20:5537194-5537810 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 2-607
Cow position: chr20:10495262-10495872 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 11-380
Cow position: chr20:23467390-23467019 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-459
Cow position: chr20:24519387-24519838 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 11-592
Cow position: chr20:12436120-12435523 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chr20:28163322-28163916 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 69

Conread position: 11-600
Cow position: chr20:23805603-23804997 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 196

Conread position: 24-396
Cow position: chr20:25332650-25332283 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 66-591
Cow position: chr20:6475865-6476389 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 74

Conread position: 71-600
Cow position: chr20:18355564-18356111 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 136

Conread position: 80-606
Cow position: chr20:37582432-37582943 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 102-601
Cow position: chr20:33182311-33181806 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 69

Conread position: 117-600
Cow position: chr20:16560162-16559661 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 130-600
Cow position: chr20:39233622-39234111 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 185-384
Cow position: chr20:9995748-9995947 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 21

Conread position: 224-607
Cow position: chr20:31079876-31080262 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 277-560
Cow position: chr20:30776285-30776569 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 62, 149

Conread position: 292-607
Cow position: chr20:39882413-39882728 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 49

Conread position: 1-352
Cow position: chr21:38024474-38024822 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 137

Conread position: 1-384
Cow position: chr21:4091710-4092095 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-607
Cow position: chr21:20742291-20741696 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 97

Conread position: 2-409
Cow position: chr21:27068587-27068176 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 207

Conread position: 10-384
Cow position: chr21:22943003-22943378 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 18

Conread position: 10-585
Cow position: chr21:34073197-34072605 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 47

Conread position: 10-607
Cow position: chr21:21051107-21051727 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 250

Conread position: 21-331
Cow position: chr21:37123959-37123650 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 21-496
Cow position: chr21:37040218-37039733 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 66

Conread position: 21-607
Cow position: chr21:22462591-22463186 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 89

Conread position: 21-607
Cow position: chr21:24948509-24949114 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 104

Conread position: 23-592
Cow position: chr21:4186346-4186931 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 96

Conread position: 37-409
Cow position: chr21:48530006-48529637 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 142

Conread position: 102-607
Cow position: chr21:21917960-21918494 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 106

Conread position: 103-592
Cow position: chr21:17143154-17143662 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 103

Conread position: 159-403
Cow position: chr21:49662883-49663126 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 17

Conread position: 198-592
Cow position: chr21:40268810-40268408 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 209-503
Cow position: chr21:17224258-17223950 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 20

Conread position: 232-593
Cow position: chr21:4280004-4279632 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 125

Conread position: 244-600
Cow position: chr21:4880816-4880444 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 241

Conread position: 249-579
Cow position: chr21:4566620-4566959 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 176

Conread position: 1-368
Cow position: chr22:36544749-36544382 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 206

Conread position: 1-380
Cow position: chr22:1807155-1807538 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 1-467
Cow position: chr22:44367276-44366791 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 1-474
Cow position: chr22:43047153-43046673 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 206

Conread position: 1-493
Cow position: chr22:30068269-30067760 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 162

Conread position: 1-527
Cow position: chr22:41473493-41472944 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 216

Conread position: 1-581
Cow position: chr22:41847347-41846750 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-607
Cow position: chr22:2391332-2390707 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 200

Conread position: 2-607
Cow position: chr22:3297524-3296929 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 142

Conread position: 3-592
Cow position: chr22:36185830-36186443 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 208

Conread position: 6-606
Cow position: chr22:36356285-36356894 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 53

Conread position: 10-368
Cow position: chr22:23826025-23826372 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 208, 108

Conread position: 10-549
Cow position: chr22:11780753-11780206 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 41

Conread position: 10-590
Cow position: chr22:8735503-8734906 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 59

Conread position: 10-607
Cow position: chr22:13208627-13209213 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 89

Conread position: 11-549
Cow position: chr22:2562549-2561982 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 196

Conread position: 11-592
Cow position: chr22:3434732-3434154 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 87

Conread position: 11-592
Cow position: chr22:26105933-26105328 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 20

Conread position: 20-500
Cow position: chr22:1862841-1863338 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 194

Conread position: 21-356
Cow position: chr22:23799794-23799467 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 49

Conread position: 21-396
Cow position: chr22:50262-50638 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 48

Conread position: 21-445
Cow position: chr22:44936165-44936607 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 189

Conread position: 21-529
Cow position: chr22:11035525-11036038 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 119

Conread position: 21-592
Cow position: chr22:31332658-31332062 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 192

Conread position: 21-607
Cow position: chr22:13774736-13775330 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 137

Conread position: 22-548
Cow position: chr22:5935937-5935388 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 242

Conread position: 24-592
Cow position: chr22:40588637-40589199 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 24-607
Cow position: chr22:17894314-17893723 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 92-388
Cow position: chr22:33799700-33799430 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 58, 90

Conread position: 92-607
Cow position: chr22:15354986-15355517 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 9

Conread position: 101-592
Cow position: chr22:25969332-25968838 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 67

Conread position: 129-605
Cow position: chr22:14600455-14600909 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 329
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 9

Conread position: 163-592
Cow position: chr22:19601435-19600992 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 209-592
Cow position: chr22:25941679-25942063 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 38

Conread position: 212-573
Cow position: chr22:583669-583315 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 32

Conread position: 254-606
Cow position: chr22:32020086-32019736 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 336-592
Cow position: chr22:38552593-38552856 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 96

Conread position: 1-592
Cow position: chr23:1021733-1021125 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 174

Conread position: 2-592
Cow position: chr23:37200320-37199713 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 10-433
Cow position: chr23:1339576-1339148 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 11-569
Cow position: chr23:4308970-4308395 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 46

Conread position: 11-589
Cow position: chr23:14971737-14971145 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 50

Conread position: 11-592
Cow position: chr23:2024867-2024281 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 57

Conread position: 11-592
Cow position: chr23:4890900-4891498 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr23:11781004-11781587 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 33

Conread position: 11-592
Cow position: chr23:36029174-36028576 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 12-601
Cow position: chr23:22169093-22169702 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 152

Conread position: 14-607
Cow position: chr23:15504255-15504808 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 52

Conread position: 18-522
Cow position: chr23:2439092-2438571 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 55

Conread position: 21-580
Cow position: chr23:3452518-3451964 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 57

Conread position: 21-592
Cow position: chr23:14960731-14960146 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 138

Conread position: 25-396
Cow position: chr23:2411409-2411044 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 139

Conread position: 26-570
Cow position: chr23:30212605-30212064 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 84

Conread position: 29-458
Cow position: chr23:19166026-19166466 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 7

Conread position: 38-600
Cow position: chr23:36097053-36097633 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 169

Conread position: 55-384
Cow position: chr23:35925765-35926078 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 163, 83

Conread position: 68-592
Cow position: chr23:14264613-14265152 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 61

Conread position: 107-600
Cow position: chr23:4080444-4080955 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 100

Conread position: 110-607
Cow position: chr23:644406-643921 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 97

Conread position: 150-600
Cow position: chr23:22989526-22989067 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 250-605
Cow position: chr23:616801-616445 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 107

Conread position: 1-410
Cow position: chr24:6657968-6657560 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 181

Conread position: 1-585
Cow position: chr24:17410742-17411310 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 1-592
Cow position: chr24:7063851-7064461 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 1-600
Cow position: chr24:6021791-6021176 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 1-607
Cow position: chr24:16907630-16908237 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 101

Conread position: 1-607
Cow position: chr24:36724349-36724957 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 211

Conread position: 1-607
Cow position: chr24:37198740-37198119 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 7-369
Cow position: chr24:22818139-22818500 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 109

Conread position: 10-593
Cow position: chr24:36557269-36556682 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 119

Conread position: 10-607
Cow position: chr24:16473274-16473856 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 86

Conread position: 10-607
Cow position: chr24:38640440-38641054 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 122

Conread position: 11-384
Cow position: chr24:12126795-12126424 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 18-571
Cow position: chr24:19642229-19642782 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 120

Conread position: 21-528
Cow position: chr24:12148792-12148272 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 89

Conread position: 21-607
Cow position: chr24:12910904-12911480 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 22-524
Cow position: chr24:16559995-16559476 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 148

Conread position: 44-384
Cow position: chr24:14350330-14350672 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 162

Conread position: 96-584
Cow position: chr24:11570782-11570291 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 114

Conread position: 135-562
Cow position: chr24:15934332-15934764 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 71

Conread position: 160-592
Cow position: chr24:16647458-16647007 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 164-600
Cow position: chr24:25371386-25371839 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 196-602
Cow position: chr24:16604294-16603876 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 5

Conread position: 206-607
Cow position: chr24:32848658-32849065 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 206-607
Cow position: chr24:36712743-36713147 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 213-601
Cow position: chr24:15295326-15295729 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 245-570
Cow position: chr24:40150846-40150512 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 194

Conread position: 264-592
Cow position: chr24:6414421-6414759 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 52, 23

Conread position: 1-364
Cow position: chr25:29359014-29359381 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-396
Cow position: chr25:11828727-11828345 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 1-559
Cow position: chr25:19922800-19923376 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-592
Cow position: chr25:16924145-16923543 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 1-600
Cow position: chr25:18191403-18190775 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 1-600
Cow position: chr25:35552672-35553286 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 4-607
Cow position: chr25:11930526-11929935 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 112

Conread position: 10-384
Cow position: chr25:24206414-24206045 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 167

Conread position: 10-607
Cow position: chr25:30809836-30810412 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 33

Conread position: 21-409
Cow position: chr25:13784858-13785246 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 184

Conread position: 21-579
Cow position: chr25:37647439-37648019 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 151

Conread position: 22-550
Cow position: chr25:35562500-35561965 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 157

Conread position: 25-600
Cow position: chr25:14537652-14537060 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 42-607
Cow position: chr25:34667697-34667127 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 165

Conread position: 49-606
Cow position: chr25:18422759-18423324 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 121

Conread position: 80-589
Cow position: chr25:23360251-23360773 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 128

Conread position: 157-543
Cow position: chr25:35648838-35648435 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 49

Conread position: 206-607
Cow position: chr25:18209506-18209092 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 238-600
Cow position: chr25:34675528-34675898 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 276-592
Cow position: chr25:39386899-39387228 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-384
Cow position: chr26:1349390-1349001 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-586
Cow position: chr26:8655066-8654483 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 1-592
Cow position: chr26:1884578-1883977 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 1-600
Cow position: chr26:2418159-2417539 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 10-606
Cow position: chr26:9483334-9483929 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 130

Conread position: 11-396
Cow position: chr26:33877733-33878110 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 11-514
Cow position: chr26:17430253-17429732 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr26:6425248-6425847 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr26:6845261-6844665 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 111

Conread position: 11-600
Cow position: chr26:366882-367488 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 196

Conread position: 124-550
Cow position: chr26:625484-625066 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 132-453
Cow position: chr26:7736018-7736353 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 75

Conread position: 155-600
Cow position: chr26:4122062-4122524 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 51

Conread position: 176-593
Cow position: chr26:35394647-35394219 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 186-607
Cow position: chr26:6079749-6079294 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 245-525
Cow position: chr26:3226466-3226753 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 114

Conread position: 310-607
Cow position: chr26:30626043-30625745 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 1-579
Cow position: chr27:3995697-3995106 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 208

Conread position: 1-607
Cow position: chr27:27194146-27193539 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 142

Conread position: 2-592
Cow position: chr27:19524517-19523909 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 204

Conread position: 11-591
Cow position: chr27:8200016-8200609 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 149

Conread position: 11-592
Cow position: chr27:26327270-26327864 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 97

Conread position: 15-603
Cow position: chr27:25965754-25965142 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 149

Conread position: 18-607
Cow position: chr27:28294644-28294044 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 42

Conread position: 23-600
Cow position: chr27:166689-166108 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 39

Conread position: 29-607
Cow position: chr27:15374061-15374650 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 103

Conread position: 38-592
Cow position: chr27:12749267-12749836 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 126

Conread position: 71-607
Cow position: chr27:31267504-31268047 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 78

Conread position: 98-600
Cow position: chr27:1519973-1520491 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 108

Conread position: 121-607
Cow position: chr27:15874722-15874266 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 124-352
Cow position: chr27:11488013-11488245 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 86

Conread position: 134-600
Cow position: chr27:18696668-18697152 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 73

Conread position: 158-600
Cow position: chr27:12147291-12146832 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 210-589
Cow position: chr27:27235756-27236148 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 1-368
Cow position: chr28:21323317-21323687 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 1-383
Cow position: chr28:23673921-23674307 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 160

Conread position: 1-561
Cow position: chr28:25849393-25848812 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-600
Cow position: chr28:28928073-28928693 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 1-607
Cow position: chr28:15575336-15575923 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 1-607
Cow position: chr28:21568146-21568770 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 209

Conread position: 9-592
Cow position: chr28:8718714-8718123 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 129

Conread position: 10-384
Cow position: chr28:10458970-10458602 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 72

Conread position: 10-607
Cow position: chr28:22578988-22579596 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 187

Conread position: 11-336
Cow position: chr28:14625212-14625538 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 25

Conread position: 11-380
Cow position: chr28:17665064-17664700 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 179

Conread position: 11-592
Cow position: chr28:1165633-1165036 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 21-508
Cow position: chr28:14190412-14189917 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 61

Conread position: 21-586
Cow position: chr28:1774096-1774666 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 119

Conread position: 21-600
Cow position: chr28:22231064-22230472 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 119

Conread position: 21-600
Cow position: chr28:24885121-24885718 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 51-600
Cow position: chr28:28470313-28470880 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 157

Conread position: 67-384
Cow position: chr28:6061102-6061412 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 90, 34

Conread position: 92-607
Cow position: chr28:23024521-23025047 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 116

Conread position: 109-607
Cow position: chr28:25562776-25563272 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 100

Conread position: 184-600
Cow position: chr28:14110495-14110928 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 197-607
Cow position: chr28:1025892-1025465 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 232-607
Cow position: chr28:6231210-6230823 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 84

Conread position: 297-579
Cow position: chr28:23800165-23800449 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 88, 58

Conread position: 310-592
Cow position: chr28:15428232-15428519 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 316-607
Cow position: chr28:32303375-32303075 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 39

Conread position: 1-365
Cow position: chr29:42805937-42806304 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 1-384
Cow position: chr29:15260781-15260392 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-599
Cow position: chr29:15967345-15966726 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 1-600
Cow position: chr29:35299134-35299748 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 1-607
Cow position: chr29:14374442-14373839 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 118

Conread position: 2-592
Cow position: chr29:26162621-26162015 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 10-607
Cow position: chr29:253135-253748 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 52

Conread position: 11-495
Cow position: chr29:10821695-10821194 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 196

Conread position: 11-590
Cow position: chr29:23978930-23979529 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 197

Conread position: 11-592
Cow position: chr29:2102067-2102667 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 12-592
Cow position: chr29:20253397-20253988 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 115

Conread position: 21-591
Cow position: chr29:45206746-45207331 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 159

Conread position: 21-592
Cow position: chr29:2839104-2838516 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 25

Conread position: 21-592
Cow position: chr29:32288620-32289211 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 66

Conread position: 21-600
Cow position: chr29:39424907-39424310 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 22-600
Cow position: chr29:5785045-5785641 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 185

Conread position: 32-607
Cow position: chr29:29617052-29616462 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 105

Conread position: 55-558
Cow position: chr29:43518908-43518396 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 85

Conread position: 73-364
Cow position: chr29:34739550-34739259 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 77, 91

Conread position: 112-364
Cow position: chr29:9080505-9080252 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 57

Conread position: 117-384
Cow position: chr29:36208112-36208376 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 92

Conread position: 159-368
Cow position: chr29:22417760-22417563 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 32

Conread position: 1-588
Cow position: chr3:38495900-38496508 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 168

Conread position: 1-591
Cow position: chr3:57741655-57742254 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 184

Conread position: 1-607
Cow position: chr3:18760271-18759669 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 22

Conread position: 1-607
Cow position: chr3:58128210-58128803 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 10-607
Cow position: chr3:48524883-48525491 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 151

Conread position: 11-282
Cow position: chr3:9433489-9433750 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 129

Conread position: 11-600
Cow position: chr3:14862340-14862946 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 12-592
Cow position: chr3:54654907-54655504 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 18-607
Cow position: chr3:62881513-62882111 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 20-531
Cow position: chr3:27865323-27865843 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 9

Conread position: 21-365
Cow position: chr3:52662549-52662891 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 147

Conread position: 21-592
Cow position: chr3:21003967-21004549 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 179

Conread position: 21-600
Cow position: chr3:37971200-37971786 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 143

Conread position: 24-564
Cow position: chr3:71140462-71139915 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 27-384
Cow position: chr3:36716485-36716132 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 105

Conread position: 106-607
Cow position: chr3:82362862-82363385 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 110-592
Cow position: chr3:45692750-45692284 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 131-364
Cow position: chr3:53392626-53392387 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 33

Conread position: 132-566
Cow position: chr3:77445929-77446342 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 59

Conread position: 142-514
Cow position: chr3:32491585-32491974 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 64

Conread position: 156-514
Cow position: chr3:38491735-38492109 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 159-356
Cow position: chr3:26752143-26751947 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 7

Conread position: 164-607
Cow position: chr3:21027100-21026654 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 180-593
Cow position: chr3:74848840-74848411 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 206-384
Cow position: chr3:4289125-4288944 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 40

Conread position: 209-607
Cow position: chr3:8242924-8243331 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 210-607
Cow position: chr3:15656941-15656538 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 239-592
Cow position: chr3:81980164-81979797 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 120

Conread position: 248-607
Cow position: chr3:36517255-36516893 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Conread position: 1-607
Cow position: chr4:9483881-9483291 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 184

Conread position: 2-592
Cow position: chr4:14141051-14141653 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 162

Conread position: 4-592
Cow position: chr4:43317713-43317109 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 10-384
Cow position: chr4:43869393-43869767 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 67

Conread position: 10-589
Cow position: chr4:21361474-21362060 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 82

Conread position: 10-606
Cow position: chr4:59317822-59317233 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 132

Conread position: 10-607
Cow position: chr4:68109607-68109014 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 56

Conread position: 11-490
Cow position: chr4:57985960-57986457 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 11-592
Cow position: chr4:2350776-2350177 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 195

Conread position: 11-607
Cow position: chr4:45655220-45654622 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 25

Conread position: 12-607
Cow position: chr4:5612050-5611443 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 61

Conread position: 21-606
Cow position: chr4:60626542-60625970 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 17

Conread position: 22-562
Cow position: chr4:21973709-21973155 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 83

Conread position: 22-592
Cow position: chr4:34385595-34385042 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 20

Conread position: 24-607
Cow position: chr4:6445615-6444993 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 197

Conread position: 59-607
Cow position: chr4:41977647-41977091 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 143

Conread position: 73-384
Cow position: chr4:1188431-1188126 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 146, 67

Conread position: 129-586
Cow position: chr4:44736177-44736632 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 43

Conread position: 156-549
Cow position: chr4:18302336-18301945 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 192-563
Cow position: chr4:65889711-65890089 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 213-467
Cow position: chr4:18313084-18312813 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 85, 32

Conread position: 1-600
Cow position: chr5:27197048-27196432 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 1-607
Cow position: chr5:24219187-24219795 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 1-607
Cow position: chr5:47080329-47080928 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 124

Conread position: 3-607
Cow position: chr5:27489985-27490618 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 10-586
Cow position: chr5:18884517-18883948 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 25

Conread position: 10-607
Cow position: chr5:4352679-4353258 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 51

Conread position: 14-586
Cow position: chr5:11957431-11956851 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 199

Conread position: 19-362
Cow position: chr5:23232350-23232687 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 84, 38

Conread position: 21-593
Cow position: chr5:14783101-14782522 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 15

Conread position: 21-606
Cow position: chr5:40348227-40347627 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 153

Conread position: 21-607
Cow position: chr5:25929633-25929035 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 33-607
Cow position: chr5:23668088-23667495 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 174

Conread position: 49-581
Cow position: chr5:34219427-34218920 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 52-600
Cow position: chr5:12132685-12133249 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 114

Conread position: 94-607
Cow position: chr5:42043041-42043548 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 197-607
Cow position: chr5:38737032-38737453 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 206-592
Cow position: chr5:23352981-23353386 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 211-607
Cow position: chr5:49756077-49755671 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 8

Conread position: 232-514
Cow position: chr5:5664961-5664676 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 26

Conread position: 234-600
Cow position: chr5:9003847-9003463 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 197

Conread position: 242-606
Cow position: chr5:28948467-28948089 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 106

Conread position: 251-587
Cow position: chr5:47359262-47359590 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 108

Conread position: 315-607
Cow position: chr5:40932804-40933091 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 146

Conread position: 1-592
Cow position: chr6:43791410-43790800 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 1-607
Cow position: chr6:40159326-40158721 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 137

Conread position: 2-385
Cow position: chr6:37478396-37478778 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 139

Conread position: 9-607
Cow position: chr6:6162305-6162923 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 429
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 170

Conread position: 10-498
Cow position: chr6:65896769-65896265 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 10-607
Cow position: chr6:16624024-16624607 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 52

Conread position: 11-592
Cow position: chr6:49391-48794 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 105

Conread position: 11-592
Cow position: chr6:1275812-1275210 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 11-592
Cow position: chr6:5947600-5946998 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 198

Conread position: 11-592
Cow position: chr6:44018646-44018050 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 131

Conread position: 21-384
Cow position: chr6:3685084-3685449 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 142

Conread position: 21-592
Cow position: chr6:15138976-15138388 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 116

Conread position: 24-592
Cow position: chr6:33465167-33465740 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 30-600
Cow position: chr6:21833439-21832871 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 51

Conread position: 38-592
Cow position: chr6:50570414-50570980 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 126

Conread position: 43-599
Cow position: chr6:51149153-51149727 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 163

Conread position: 58-605
Cow position: chr6:6158897-6159449 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 190

Conread position: 101-607
Cow position: chr6:3573055-3573563 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 105-592
Cow position: chr6:15278279-15277770 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 164-607
Cow position: chr6:39956407-39956856 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 42

Conread position: 166-567
Cow position: chr6:69144736-69145146 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 194-599
Cow position: chr6:10235575-10235986 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 233-384
Cow position: chr6:32677526-32677372 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 126

Conread position: 1-376
Cow position: chr7:29364199-29363828 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 101

Conread position: 1-409
Cow position: chr7:39597075-39596666 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 210

Conread position: 1-468
Cow position: chr7:58643286-58642817 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 2-600
Cow position: chr7:21125419-21124792 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 219

Conread position: 10-384
Cow position: chr7:64352003-64352376 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 196

Conread position: 10-579
Cow position: chr7:65331377-65330797 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 64

Conread position: 10-592
Cow position: chr7:49071738-49071121 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 157

Conread position: 10-607
Cow position: chr7:52802322-52801714 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 11-227
Cow position: chr7:47974033-47973819 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 49

Conread position: 11-592
Cow position: chr7:14213123-14212549 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 196

Conread position: 21-371
Cow position: chr7:6801482-6801830 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 21-593
Cow position: chr7:61624381-61623819 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 24

Conread position: 24-592
Cow position: chr7:58349752-58349173 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 14

Conread position: 44-593
Cow position: chr7:40264903-40264333 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 163

Conread position: 61-607
Cow position: chr7:18855495-18856053 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 88

Conread position: 92-384
Cow position: chr7:22343384-22343109 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 201, 8

Conread position: 121-586
Cow position: chr7:49847534-49847065 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 43

Conread position: 132-409
Cow position: chr7:44746667-44746391 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 32

Conread position: 161-600
Cow position: chr7:52763219-52762771 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 170-607
Cow position: chr7:37417411-37417865 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 192-607
Cow position: chr7:20828491-20828910 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 210-607
Cow position: chr7:56823279-56823690 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 36

Conread position: 231-592
Cow position: chr7:24421851-24422223 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 246-607
Cow position: chr7:42428107-42428485 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 276-607
Cow position: chr7:51193264-51193592 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 26

Conread position: 1-575
Cow position: chr8:58184182-58183617 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 53

Conread position: 1-607
Cow position: chr8:27536408-27535797 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 61

Conread position: 1-607
Cow position: chr8:41949672-41950258 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 2-384
Cow position: chr8:2234291-2233909 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 180

Conread position: 2-592
Cow position: chr8:8913173-8913779 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 143

Conread position: 2-600
Cow position: chr8:50431699-50431079 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 209

Conread position: 7-384
Cow position: chr8:32082199-32081821 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 140

Conread position: 10-377
Cow position: chr8:51700781-51701152 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 239

Conread position: 10-384
Cow position: chr8:35544113-35544490 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 176

Conread position: 10-396
Cow position: chr8:44123560-44123941 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 55

Conread position: 10-592
Cow position: chr8:38044673-38044073 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 119

Conread position: 11-592
Cow position: chr8:4272735-4273324 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 18

Conread position: 11-607
Cow position: chr8:27154673-27154062 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 86

Conread position: 21-607
Cow position: chr8:24229905-24230502 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 43

Conread position: 24-354
Cow position: chr8:42655520-42655194 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 175, 49

Conread position: 55-607
Cow position: chr8:42541942-42541378 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 32

Conread position: 72-607
Cow position: chr8:45689297-45688771 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 46

Conread position: 81-607
Cow position: chr8:32302523-32303054 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 104-607
Cow position: chr8:29032313-29031798 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 75

Conread position: 105-591
Cow position: chr8:52860797-52861304 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 67

Conread position: 115-606
Cow position: chr8:20675996-20675491 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 115-607
Cow position: chr8:25847320-25846814 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 92

Conread position: 151-397
Cow position: chr8:25670842-25671093 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 54

Conread position: 202-520
Cow position: chr8:34406190-34406522 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 240

Conread position: 202-607
Cow position: chr8:55302563-55302969 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 44

Conread position: 205-591
Cow position: chr8:8399466-8399087 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 41

Conread position: 209-592
Cow position: chr8:50284564-50284164 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 376

Conread position: 232-386
Cow position: chr8:33854476-33854626 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 17

Conread position: 245-586
Cow position: chr8:40550587-40550246 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 219

Conread position: 248-592
Cow position: chr8:32927634-32927265 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 111

Conread position: 264-607
Cow position: chr8:4746582-4746231 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 289-607
Cow position: chr8:16091615-16091941 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 147

Conread position: 1-513
Cow position: chr9:60324885-60324365 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 1-586
Cow position: chr9:4648526-4647948 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 40

Conread position: 1-600
Cow position: chr9:2485518-2484901 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 166

Conread position: 1-606
Cow position: chr9:33951101-33950488 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 134

Conread position: 10-379
Cow position: chr9:18778941-18778582 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 119

Conread position: 10-419
Cow position: chr9:42311803-42312212 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 154

Conread position: 10-464
Cow position: chr9:34770276-34770737 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 154

Conread position: 10-594
Cow position: chr9:50774961-50775554 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 65

Conread position: 11-592
Cow position: chr9:17303855-17303265 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chr9:28658940-28658342 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 195

Conread position: 21-465
Cow position: chr9:3728949-3729415 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 119

Conread position: 21-592
Cow position: chr9:22441634-22442196 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 25

Conread position: 21-607
Cow position: chr9:2594794-2595389 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 15

Conread position: 22-592
Cow position: chr9:19077792-19078366 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 27

Conread position: 24-384
Cow position: chr9:44521062-44521400 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 103

Conread position: 25-466
Cow position: chr9:3577360-3576905 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 182

Conread position: 30-607
Cow position: chr9:35593946-35593372 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 47

Conread position: 44-607
Cow position: chr9:61238798-61238231 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 163

Conread position: 94-377
Cow position: chr9:10759660-10759931 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 200, 22

Conread position: 106-461
Cow position: chr9:11712328-11712674 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 115-607
Cow position: chr9:8739273-8738776 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 116-607
Cow position: chr9:3412703-3412195 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 124-600
Cow position: chr9:15053660-15053167 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 39

Conread position: 178-600
Cow position: chr9:999741-1000180 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 28

Conread position: 191-607
Cow position: chr9:8097468-8097877 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 204-606
Cow position: chr9:27291663-27291240 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 208-607
Cow position: chr9:4306757-4306347 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 25

Conread position: 216-600
Cow position: chr9:26276972-26277369 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 294-605
Cow position: chr9:56745589-56745271 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 63

Conread position: 323-592
Cow position: chr9:14766511-14766770 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 1-384
Cow position: chrX:21751654-21751264 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 126

Conread position: 1-543
Cow position: chrX:34093823-34093260 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-592
Cow position: chrX:2381517-2382082 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 1-592
Cow position: chrX:39696781-39697384 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 1-600
Cow position: chrX:6579951-6580558 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 206

Conread position: 1-600
Cow position: chrX:24412037-24412651 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 46

Conread position: 1-607
Cow position: chrX:35939020-35938410 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 2-607
Cow position: chrX:36838724-36839345 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 211

Conread position: 4-592
Cow position: chrX:23454041-23453437 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 133

Conread position: 10-384
Cow position: chrX:29792044-29791687 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 129, 148

Conread position: 10-607
Cow position: chrX:22126749-22126151 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 150

Conread position: 11-590
Cow position: chrX:9094666-9095256 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chrX:13407262-13406671 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 195

Conread position: 21-501
Cow position: chrX:7095529-7096022 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 143

Conread position: 21-561
Cow position: chrX:30436934-30437492 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 21-588
Cow position: chrX:21492195-21492781 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 21-592
Cow position: chrX:31727512-31728092 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 119

Conread position: 21-592
Cow position: chrX:34007813-34008401 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 125

Conread position: 21-606
Cow position: chrX:6248145-6247575 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 117

Conread position: 24-384
Cow position: chrX:28625591-28625233 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 101

Conread position: 25-387
Cow position: chrX:3142869-3143234 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 25-484
Cow position: chrX:21268040-21267562 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 5

Conread position: 26-356
Cow position: chrX:17665764-17665430 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 181

Conread position: 32-549
Cow position: chrX:21000245-21000785 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 65

Conread position: 38-384
Cow position: chrX:20364068-20363749 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 57

Conread position: 43-592
Cow position: chrX:20741578-20741013 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 164

Conread position: 44-565
Cow position: chrX:13416376-13415838 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 20

Conread position: 52-592
Cow position: chrX:4906933-4906381 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 154

Conread position: 58-607
Cow position: chrX:3407265-3406706 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 72-592
Cow position: chrX:26443159-26442630 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 113

Conread position: 78-592
Cow position: chrX:27591930-27591405 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 86

Conread position: 82-383
Cow position: chrX:22590753-22590446 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 127

Conread position: 118-379
Cow position: chrX:21628252-21627993 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 46

Conread position: 142-592
Cow position: chrX:9067124-9067583 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 197-384
Cow position: chrX:47394750-47394560 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 9

Conread position: 233-514
Cow position: chrX:16736831-16736537 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 45

Conread position: 236-600
Cow position: chrX:30164987-30164607 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 250-607
Cow position: chrX:19877075-19877461 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39