Cow genome map

Conread name: rebs34c_a9.y1

Conread position: 3-296
Cow position: chr11:50368570-50368277 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 106

Conread position: 40-381
Cow position: chr11:74554780-74554439 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 215
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 64

Conread position: 65-358
Cow position: chr11:50368592-50368299 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-363
Cow position: chr13:22125551-22125912 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 225
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 95

Conread position: 2-387
Cow position: chr13:24162773-24163157 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 236
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 125, 121

Conread position: 2-395
Cow position: chr13:22125467-22125859 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 244
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 25

Conread position: 2-395
Cow position: chr13:24163193-24163585 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 25

Conread position: 2-397
Cow position: chr13:22124963-22125357 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 245
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 109

Conread position: 2-397
Cow position: chr13:24162689-24163083 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 107

Conread position: 2-406
Cow position: chr13:22125215-22125617 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 246
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 305, 313

Conread position: 2-508
Cow position: chr13:24162857-24163361 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 309
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 113

Conread position: 3-388
Cow position: chr13:24163026-24163411 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 99

Conread position: 3-403
Cow position: chr13:22125300-22125700 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 245
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 387, 392

Conread position: 3-459
Cow position: chr13:22124712-22125168 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 275
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-459
Cow position: chr13:24162438-24162894 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 281
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 102

Conread position: 42-381
Cow position: chr13:39930806-39931145 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 59

Conread position: 42-388
Cow position: chr13:39930638-39930984 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 59

Conread position: 42-388
Cow position: chr13:39930722-39931068 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 59

Conread position: 42-418
Cow position: chr13:22124919-22125295 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 81

Conread position: 42-418
Cow position: chr13:24162645-24163021 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 81

Conread position: 42-463
Cow position: chr13:22125171-22125592 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 261
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 73

Conread position: 65-408
Cow position: chr13:22124690-22125031 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 208
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 317, 0

Conread position: 65-408
Cow position: chr13:24162416-24162757 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 210
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 317, 0

Conread position: 113-387
Cow position: chr13:22125158-22125431 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 10

Conread position: 199-388
Cow position: chr13:39930627-39930816 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 56

Conread position: 2-301
Cow position: chr14:434099-434399 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 296, 0

Conread position: 2-312
Cow position: chr14:447962-448272 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-353
Cow position: chr14:3080557-3080206 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 213
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-358
Cow position: chr14:25895403-25895759 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-381
Cow position: chr14:680260-680639 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 229
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-381
Cow position: chr14:3061032-3060653 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-381
Cow position: chr14:3080221-3079842 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 188, 181

Conread position: 2-388
Cow position: chr14:3127649-3127263 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-388
Cow position: chr14:25895571-25895957 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 226
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-424
Cow position: chr14:447710-448132 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 106

Conread position: 2-425
Cow position: chr14:3061284-3060861 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 265
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 342, 355

Conread position: 2-455
Cow position: chr14:25895151-25895604 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 278
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 388, 394

Conread position: 2-468
Cow position: chr14:3080473-3080007 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 282
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 400, 381

Conread position: 16-370
Cow position: chr14:3061690-3061336 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 16-424
Cow position: chr14:3080627-3080219 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 250
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 386, 367

Conread position: 18-424
Cow position: chr14:3061436-3061030 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 241
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 91, 97

Conread position: 19-380
Cow position: chr14:447559-447920 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 19-392
Cow position: chr14:680445-680819 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 371, 0

Conread position: 23-431
Cow position: chr14:3061770-3061359 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 251
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 103

Conread position: 29-358
Cow position: chr14:25895346-25895675 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 215, 208

Conread position: 29-424
Cow position: chr14:3061341-3060946 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 379, 354

Conread position: 30-388
Cow position: chr14:680624-680982 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 30-424
Cow position: chr14:433959-434353 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-424
Cow position: chr14:3061172-3060778 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 245
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 232, 241

Conread position: 36-313
Cow position: chr14:3127783-3127506 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-381
Cow position: chr14:3080103-3079758 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 65

Conread position: 36-388
Cow position: chr14:434049-434401 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 37-225
Cow position: chr14:3155649-3155837 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 37-305
Cow position: chr14:3155565-3155833 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 37-358
Cow position: chr14:3155481-3155802 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 37-362
Cow position: chr14:3128034-3127709 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 205
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 37-369
Cow position: chr14:447913-448245 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 37-381
Cow position: chr14:3127866-3127522 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 37-388
Cow position: chr14:680547-680898 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 37-424
Cow position: chr14:447829-448216 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 247
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 239, 244

Conread position: 37-424
Cow position: chr14:3061585-3061198 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 234
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 83

Conread position: 37-424
Cow position: chr14:25895270-25895657 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 240
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 291, 284

Conread position: 37-425
Cow position: chr14:680715-681103 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 38-305
Cow position: chr14:3079933-3079666 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 39-368
Cow position: chr14:25895104-25895433 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 203
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 39-424
Cow position: chr14:680381-680766 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 71, 76

Conread position: 40-305
Cow position: chr14:680970-681235 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 59

Conread position: 40-381
Cow position: chr14:3080267-3079926 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 40-424
Cow position: chr14:3080687-3080303 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 362, 343

Conread position: 40-463
Cow position: chr14:3061078-3060655 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 42-369
Cow position: chr14:680804-681131 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 42-381
Cow position: chr14:25895695-25896034 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 203
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 42-424
Cow position: chr14:3156059-3156441 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 231
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 359, 339

Conread position: 48-354
Cow position: chr14:663404-663098 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 48-408
Cow position: chr14:447672-448030 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 225
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 314, 329

Conread position: 48-424
Cow position: chr14:3155408-3155784 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 230
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 361, 335

Conread position: 49-388
Cow position: chr14:3080762-3080423 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 51-386
Cow position: chr14:3128104-3127770 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 332, 0

Conread position: 66-424
Cow position: chr14:680240-680598 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 324, 329

Conread position: 72-424
Cow position: chr14:3080823-3080471 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 219
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 327, 311

Conread position: 86-372
Cow position: chr14:3061452-3061166 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 107, 114

Conread position: 103-424
Cow position: chr14:447559-447880 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 287, 292

Conread position: 114-388
Cow position: chr14:3079941-3079667 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 171
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 125-424
Cow position: chr14:3127610-3127311 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 184
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 274, 258

Conread position: 134-381
Cow position: chr14:3156235-3156482 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 150-424
Cow position: chr14:433827-434101 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 216, 212

Conread position: 159-388
Cow position: chr14:3128164-3127935 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 25-260
Cow position: chr15:19138928-19138693 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 34

Conread position: 38-381
Cow position: chr15:48468677-48469029 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 71

Conread position: 41-424
Cow position: chr15:19139163-19138781 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 236
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 10

Conread position: 219-504
Cow position: chr15:19139154-19138873 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 248, 0

Conread position: 2-380
Cow position: chr17:41440582-41440204 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-380
Cow position: chr17:41441086-41440708 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 216, 200

Conread position: 2-424
Cow position: chr17:41441002-41440580 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 261
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 125, 121

Conread position: 2-424
Cow position: chr17:44467477-44467899 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 347, 341

Conread position: 16-265
Cow position: chr17:44467995-44468244 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 18-513
Cow position: chr17:41440650-41440153 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 311
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 109, 102

Conread position: 21-459
Cow position: chr17:44467832-44468270 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 272
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 350, 370

Conread position: 36-344
Cow position: chr17:44467595-44467903 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 152

Conread position: 36-424
Cow position: chr17:44467679-44468067 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 232, 225

Conread position: 40-424
Cow position: chr17:41440796-41440412 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 86, 80

Conread position: 42-380
Cow position: chr17:44467937-44468275 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 46-424
Cow position: chr17:41440873-41440496 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 51-454
Cow position: chr17:44467357-44467761 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 260
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 50

Conread position: 56-424
Cow position: chr17:41441116-41440748 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 65

Conread position: 66-463
Cow position: chr17:44467457-44467854 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 159-363
Cow position: chr17:22552910-22552706 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 222-424
Cow position: chr17:41441118-41440916 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 175, 161

Conread position: 2-275
Cow position: chr18:42724214-42723941 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 264, 269

Conread position: 2-328
Cow position: chr18:53610429-53610103 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 101

Conread position: 2-341
Cow position: chr18:54668741-54668402 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 107

Conread position: 2-380
Cow position: chr18:50281964-50282342 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 224
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 169, 175

Conread position: 2-424
Cow position: chr18:55497584-55497162 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 264
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 12

Conread position: 2-424
Cow position: chr18:56391393-56390971 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 99

Conread position: 2-443
Cow position: chr18:56391309-56390868 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 3-286
Cow position: chr18:44818593-44818876 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 75

Conread position: 3-296
Cow position: chr18:56391947-56391654 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 113, 106

Conread position: 3-424
Cow position: chr18:56329560-56329139 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 265
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 88, 103

Conread position: 12-400
Cow position: chr18:56128505-56128892 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 233
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 114

Conread position: 16-262
Cow position: chr18:53635656-53635410 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 84

Conread position: 16-424
Cow position: chr18:56316437-56316845 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 252
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 54

Conread position: 19-424
Cow position: chr18:54668808-54668403 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 242
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 27

Conread position: 19-424
Cow position: chr18:55497651-55497246 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 254
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 82

Conread position: 20-330
Cow position: chr18:47846545-47846235 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 20-456
Cow position: chr18:47846461-47846025 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 419, 408

Conread position: 21-424
Cow position: chr18:56391542-56391139 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-455
Cow position: chr18:54668889-54668456 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 257
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 33

Conread position: 29-361
Cow position: chr18:56391198-56390866 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-369
Cow position: chr18:53635559-53635219 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 203
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-398
Cow position: chr18:55497389-55497019 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 239
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 59

Conread position: 29-463
Cow position: chr18:56391619-56391184 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 276
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 96

Conread position: 30-424
Cow position: chr18:47846703-47846309 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 248
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 79

Conread position: 36-359
Cow position: chr18:42724516-42724193 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 36-405
Cow position: chr18:56329191-56328823 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 156

Conread position: 36-424
Cow position: chr18:56329695-56329307 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 153

Conread position: 37-275
Cow position: chr18:56267387-56267149 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 37-346
Cow position: chr18:49033141-49032832 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 37-424
Cow position: chr18:56329610-56329223 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 365, 346

Conread position: 40-305
Cow position: chr18:56391103-56390838 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 40-352
Cow position: chr18:49033222-49032910 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 40-362
Cow position: chr18:53635716-53635394 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 40-381
Cow position: chr18:53610307-53609966 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 40-387
Cow position: chr18:56267468-56267121 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 48

Conread position: 40-388
Cow position: chr18:52012283-52011935 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 41-388
Cow position: chr18:49033053-49032706 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 301, 290

Conread position: 41-388
Cow position: chr18:56329354-56329007 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 210
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 150

Conread position: 42-381
Cow position: chr18:56128115-56128454 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 42-381
Cow position: chr18:56329857-56329518 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 42-388
Cow position: chr18:56329437-56329091 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 42-406
Cow position: chr18:53610473-53610111 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 341, 0

Conread position: 42-424
Cow position: chr18:55497460-55497078 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 59

Conread position: 42-424
Cow position: chr18:56316547-56316929 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 230
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 355, 348

Conread position: 42-424
Cow position: chr18:56316631-56317013 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 46-306
Cow position: chr18:22843603-22843343 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 48-381
Cow position: chr18:49032794-49032461 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 206
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 37

Conread position: 65-358
Cow position: chr18:56391969-56391676 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 66-424
Cow position: chr18:42724570-42724212 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 332, 337

Conread position: 83-468
Cow position: chr18:46317254-46316871 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 229
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 31

Conread position: 98-463
Cow position: chr18:56267494-56267129 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 338, 326

Conread position: 101-342
Cow position: chr18:22844396-22844159 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 105-380
Cow position: chr18:44818611-44818886 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 166, 153

Conread position: 105-395
Cow position: chr18:54664058-54664349 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 25

Conread position: 113-459
Cow position: chr18:50281907-50282253 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 217, 230

Conread position: 114-381
Cow position: chr18:44817891-44818158 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 135-388
Cow position: chr18:49033295-49033042 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 236, 241

Conread position: 135-424
Cow position: chr18:49033211-49032922 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 143-374
Cow position: chr18:54687753-54687984 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 150-424
Cow position: chr18:55497688-55497414 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 210, 229

Conread position: 156-367
Cow position: chr18:50083810-50084021 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 156-406
Cow position: chr18:53635684-53635436 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 227, 0

Conread position: 156-406
Cow position: chr18:56128481-56128729 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 227, 0

Conread position: 37-381
Cow position: chr19:23649459-23649803 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 125-381
Cow position: chr19:23649379-23649635 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 141-369
Cow position: chr19:23649479-23649707 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-296
Cow position: chr21:12659708-12660002 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-367
Cow position: chr21:12659624-12659989 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 125, 121

Conread position: 2-381
Cow position: chr21:12659288-12659667 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 121

Conread position: 2-424
Cow position: chr21:12659036-12659458 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 121

Conread position: 2-455
Cow position: chr21:12659120-12659573 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 430

Conread position: 2-455
Cow position: chr21:12659540-12659993 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 282
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 41, 32

Conread position: 3-424
Cow position: chr21:12659373-12659794 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 262
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 241, 234

Conread position: 12-369
Cow position: chr21:12658878-12659235 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 97, 102

Conread position: 16-424
Cow position: chr21:12659470-12659878 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 144, 137

Conread position: 24-469
Cow position: chr21:12608368-12607921 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 272
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 99

Conread position: 28-424
Cow position: chr21:12608532-12608136 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 32-431
Cow position: chr21:12658812-12659213 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 177

Conread position: 40-388
Cow position: chr21:34222894-34222546 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 214
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 236, 241

Conread position: 41-381
Cow position: chr21:12608855-12608515 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 209
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 101, 79

Conread position: 41-424
Cow position: chr21:12608435-12608052 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 41-505
Cow position: chr21:12608687-12608223 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 278
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 45

Conread position: 42-420
Cow position: chr21:12658992-12659370 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 114-398
Cow position: chr21:12608698-12608414 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 257, 262

Conread position: 135-424
Cow position: chr21:12658833-12659122 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 197-464
Cow position: chr21:12658811-12659078 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 229, 238

Conread position: 2-261
Cow position: chr25:33529217-33529476 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 79

Conread position: 2-296
Cow position: chr25:25653063-25653357 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-301
Cow position: chr25:3636275-3635976 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-323
Cow position: chr25:4657346-4657024 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 20

Conread position: 2-350
Cow position: chr25:33506783-33507131 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 32

Conread position: 2-369
Cow position: chr25:4657430-4657063 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 97

Conread position: 2-369
Cow position: chr25:25652391-25652758 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-370
Cow position: chr25:25652811-25653179 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 12

Conread position: 2-375
Cow position: chr25:34473710-34474080 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 102

Conread position: 2-381
Cow position: chr25:33157354-33156975 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 238
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 92, 112

Conread position: 2-381
Cow position: chr25:33298598-33298977 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-381
Cow position: chr25:33298682-33299061 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-424
Cow position: chr25:3636443-3636021 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 393

Conread position: 2-424
Cow position: chr25:3663966-3664388 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 266
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 188, 179

Conread position: 2-424
Cow position: chr25:25652643-25653065 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 269
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 388, 393

Conread position: 2-455
Cow position: chr25:25652475-25652928 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 286
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 434, 422

Conread position: 2-459
Cow position: chr25:25652223-25652680 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-212
Cow position: chr25:3676209-3676405 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-330
Cow position: chr25:25652993-25653307 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 92, 99

Conread position: 16-369
Cow position: chr25:3676041-3676394 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 75

Conread position: 16-459
Cow position: chr25:34473556-34473996 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 274
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 111, 107

Conread position: 18-345
Cow position: chr25:33529149-33529476 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 269, 274

Conread position: 18-417
Cow position: chr25:33530196-33530595 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 67

Conread position: 18-418
Cow position: chr25:3636511-3636111 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-424
Cow position: chr25:25652323-25652729 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 258
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 18-424
Cow position: chr25:33530280-33530686 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 63

Conread position: 18-463
Cow position: chr25:33530364-33530809 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 82

Conread position: 19-310
Cow position: chr25:3676128-3676418 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 150, 168

Conread position: 19-358
Cow position: chr25:24385196-24384857 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 20-342
Cow position: chr25:24385027-24384705 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 279, 286

Conread position: 30-417
Cow position: chr25:24385269-24384882 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 79

Conread position: 30-426
Cow position: chr25:24385353-24384957 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 77

Conread position: 35-456
Cow position: chr25:3675976-3676397 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 268
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 336, 356

Conread position: 36-446
Cow position: chr25:24385095-24384684 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 336, 343

Conread position: 37-315
Cow position: chr25:33157235-33156957 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 245, 239

Conread position: 40-275
Cow position: chr25:34733936-34733701 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 40-381
Cow position: chr25:33157400-33157059 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 216
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 40-425
Cow position: chr25:3664172-3664557 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 40-455
Cow position: chr25:3664088-3664503 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 260
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 61

Conread position: 41-320
Cow position: chr25:22941303-22941024 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 175
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 62

Conread position: 41-348
Cow position: chr25:33530135-33530442 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 42-328
Cow position: chr25:33298806-33299092 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 175
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-424
Cow position: chr25:25652767-25653149 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 64, 58

Conread position: 42-424
Cow position: chr25:25652935-25653317 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 46-424
Cow position: chr25:3663926-3664304 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 351, 337

Conread position: 50-369
Cow position: chr25:25652187-25652506 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 54-424
Cow position: chr25:3636559-3636189 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 236
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 27

Conread position: 56-297
Cow position: chr25:24398649-24398408 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 127

Conread position: 56-424
Cow position: chr25:33529103-33529471 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 63-356
Cow position: chr25:24385404-24385111 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 38

Conread position: 65-341
Cow position: chr25:3637079-3636800 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 119

Conread position: 65-393
Cow position: chr25:33530495-33530822 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 317, 0

Conread position: 65-444
Cow position: chr25:33506762-33507141 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 56

Conread position: 66-424
Cow position: chr25:33529029-33529387 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 324, 329

Conread position: 67-425
Cow position: chr25:3675925-3676282 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 27

Conread position: 72-388
Cow position: chr25:34733988-34733672 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 85-358
Cow position: chr25:3636276-3636003 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 85-381
Cow position: chr25:3664301-3664597 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 275, 280

Conread position: 102-381
Cow position: chr25:4657414-4657135 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 97, 88

Conread position: 105-417
Cow position: chr25:33530115-33530427 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 199
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 163, 154

Conread position: 112-424
Cow position: chr25:33506722-33507037 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 270

Conread position: 113-396
Cow position: chr25:33127948-33128231 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 128-358
Cow position: chr25:25652181-25652411 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 133-381
Cow position: chr25:34763493-34763741 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 134-388
Cow position: chr25:34763161-34763415 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 135-381
Cow position: chr25:33127802-33128048 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 135-445
Cow position: chr25:36844536-36844235 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 257, 180

Conread position: 140-382
Cow position: chr25:24398649-24398407 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 141-386
Cow position: chr25:22235919-22236163 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 237, 231

Conread position: 150-412
Cow position: chr25:4657450-4657190 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 133, 124

Conread position: 198-424
Cow position: chr25:33157410-33157184 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 147

Conread position: 16-369
Cow position: chr28:34696213-34696566 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 225
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 29-381
Cow position: chr28:34696142-34696494 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 349, 342

Conread position: 39-456
Cow position: chr28:34696068-34696485 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 266
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 339, 332

Conread position: 42-311
Cow position: chr28:34696323-34696590 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 73

Conread position: 2-298
Cow position: chr4:65350497-65350793 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 89

Conread position: 2-305
Cow position: chr4:65494732-65494429 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 89, 100

Conread position: 2-310
Cow position: chr4:65702759-65702452 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 108

Conread position: 2-345
Cow position: chr4:65349996-65350339 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-358
Cow position: chr4:65350416-65350769 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 217
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 70

Conread position: 2-369
Cow position: chr4:65261517-65261150 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 108, 113

Conread position: 2-377
Cow position: chr4:65121736-65122112 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 100

Conread position: 2-381
Cow position: chr4:65120998-65121386 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 2-443
Cow position: chr4:65261601-65261160 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 393

Conread position: 2-443
Cow position: chr4:65494906-65494459 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 291
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 113

Conread position: 2-443
Cow position: chr4:65703464-65703026 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 283
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 125, 121

Conread position: 2-454
Cow position: chr4:65350164-65350613 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 278
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 93

Conread position: 3-540
Cow position: chr4:65121653-65122190 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-296
Cow position: chr4:65157901-65158176 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 28

Conread position: 18-350
Cow position: chr4:65703532-65703200 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 18-358
Cow position: chr4:65702827-65702487 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 185, 191

Conread position: 18-381
Cow position: chr4:65494800-65494437 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-424
Cow position: chr4:65350348-65350751 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 249
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 86, 73

Conread position: 20-459
Cow position: chr4:65121586-65122025 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-424
Cow position: chr4:65349765-65350166 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 246
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 175, 169

Conread position: 29-424
Cow position: chr4:65349855-65350250 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 246
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 17

Conread position: 32-424
Cow position: chr4:65702899-65702505 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 36-447
Cow position: chr4:65350114-65350522 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 263
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 139, 146

Conread position: 36-463
Cow position: chr4:65703598-65703171 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 388

Conread position: 42-455
Cow position: chr4:65494950-65494531 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 359

Conread position: 44-451
Cow position: chr4:65349954-65350361 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 249
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 78, 82

Conread position: 48-392
Cow position: chr4:65146417-65146761 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 218
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 59

Conread position: 51-425
Cow position: chr4:65703667-65703293 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 40

Conread position: 64-451
Cow position: chr4:65121546-65121933 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 333, 319

Conread position: 72-447
Cow position: chr4:65495004-65494623 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 240
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 329

Conread position: 89-395
Cow position: chr4:65146373-65146680 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 28, 42

Conread position: 102-369
Cow position: chr4:65157901-65158165 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 109-301
Cow position: chr4:65146899-65147093 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 7

Conread position: 109-424
Cow position: chr4:65702904-65702589 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 15

Conread position: 117-445
Cow position: chr4:65261654-65261326 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 278, 266

Conread position: 128-463
Cow position: chr4:65703674-65703339 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 65

Conread position: 134-388
Cow position: chr4:65157837-65158100 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 200-369
Cow position: chr4:65146905-65147077 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 216-459
Cow position: chr4:65146417-65146660 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 174, 179

Conread position: 241-388
Cow position: chr4:65402063-65402210 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-358
Cow position: chr6:49428851-49429207 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-369
Cow position: chr6:49428263-49428630 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-370
Cow position: chr6:49428347-49428715 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-412
Cow position: chr6:49429019-49429429 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 255
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-424
Cow position: chr6:49428431-49428853 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 369, 390

Conread position: 3-380
Cow position: chr6:49429104-49429481 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 221
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-424
Cow position: chr6:49428523-49428937 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 265
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 361, 369

Conread position: 28-424
Cow position: chr6:49428201-49428601 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 9, 213

Conread position: 29-369
Cow position: chr6:49428962-49429302 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 302, 311

Conread position: 29-456
Cow position: chr6:49428794-49429221 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 331

Conread position: 36-456
Cow position: chr6:49428633-49429053 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 335, 356

Conread position: 36-456
Cow position: chr6:49428717-49429137 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 270
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 55

Conread position: 42-303
Cow position: chr6:49429227-49429488 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-424
Cow position: chr7:28846458-28846880 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 260
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 12

Conread position: 17-360
Cow position: chr7:28846556-28846900 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 214
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 5, 85

Conread position: 19-310
Cow position: chr7:28846727-28847018 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-424
Cow position: chr7:12293567-12293973 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 361

Conread position: 41-426
Cow position: chr7:12293506-12293891 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 319, 350

Conread position: 42-368
Cow position: chr7:12293675-12294001 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 48-347
Cow position: chr7:12293345-12293644 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 52

Conread position: 54-346
Cow position: chr7:12293267-12293559 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 131-381
Cow position: chr7:12293260-12293510 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 36-342
Cow position: chrX:14181237-14180931 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 246, 240

Conread position: 36-370
Cow position: chrX:14181405-14181071 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 40-456
Cow position: chrX:13826707-13826291 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 252
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 55

Conread position: 113-381
Cow position: chrX:14181244-14180976 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 113-424
Cow position: chrX:14181412-14181101 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 67