Cow genome map
| Conread name: | reru07c_n10.y1 |
| Conread position: | 38-421 |
| Cow position: | chr1:53559286-53559683 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 38-454 |
| Cow position: | chr1:62100712-62101136 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 209 |
| Conread position: | 42-353 |
| Cow position: | chr1:50591839-50591514 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 228 |
| Conread position: | 149-421 |
| Cow position: | chr1:82071671-82071410 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-421 |
| Cow position: | chr11:63647849-63647412 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 39-310 |
| Cow position: | chr11:75358017-75357742 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 40-397 |
| Cow position: | chr11:75309024-75309390 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 1-397 |
| Cow position: | chr12:27081272-27081644 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 35 |
| Conread position: | 1-421 |
| Cow position: | chr12:27514738-27514303 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 21-421 |
| Cow position: | chr12:11511500-11511114 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 47-380 |
| Cow position: | chr12:33705312-33704966 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 186 |
| Conread position: | 49-421 |
| Cow position: | chr13:34018944-34019333 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 55-419 |
| Cow position: | chr13:21847880-21847504 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 192 |
| Conread position: | 3-421 |
| Cow position: | chr15:22239289-22239715 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 3-423 |
| Cow position: | chr15:13389613-13390032 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 38-280 |
| Cow position: | chr15:44860241-44859985 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 38-410 |
| Cow position: | chr15:21804720-21804334 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 46, 223 |
| Conread position: | 103-398 |
| Cow position: | chr16:23534639-23534926 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 170, 51 |
| Conread position: | 41-402 |
| Cow position: | chr17:6078026-6077653 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 45-380 |
| Cow position: | chr17:1388126-1388479 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 43, 338 |
| Conread position: | 1-300 |
| Cow position: | chr18:8646504-8646194 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 1-329 |
| Cow position: | chr18:15852794-15852468 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 159, 14 |
| Conread position: | 1-421 |
| Cow position: | chr18:36783548-36783130 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 151-403 |
| Cow position: | chr18:55003966-55004212 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 38-381 |
| Cow position: | chr19:34180300-34179943 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 104-421 |
| Cow position: | chr19:5161722-5162015 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 271, 12 |
| Conread position: | 1-421 |
| Cow position: | chr2:10879729-10879295 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 1-421 |
| Cow position: | chr2:41780808-41780376 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 38-421 |
| Cow position: | chr2:24152956-24152560 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 38-421 |
| Cow position: | chr2:26069398-26069798 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 202 |
| Conread position: | 40-406 |
| Cow position: | chr2:38800267-38800620 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 15-392 |
| Cow position: | chr21:45299858-45300235 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 38-395 |
| Cow position: | chr21:4712885-4712533 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 42-397 |
| Cow position: | chr21:26566050-26566432 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 234 |
| Conread position: | 57-421 |
| Cow position: | chr21:13185792-13185425 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 270 |
| Conread position: | 1-422 |
| Cow position: | chr22:21188885-21189322 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 42-350 |
| Cow position: | chr22:37715798-37716111 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 46-289 |
| Cow position: | chr23:10717549-10717800 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 1-292 |
| Cow position: | chr24:6472252-6471962 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 1-412 |
| Cow position: | chr24:29407262-29407684 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 40-421 |
| Cow position: | chr24:5887133-5887527 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 15-422 |
| Cow position: | chr26:26998266-26998673 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 104-405 |
| Cow position: | chr26:32923807-32924109 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 103-424 |
| Cow position: | chr27:26327017-26326700 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 38-423 |
| Cow position: | chr28:918485-918860 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 38-423 |
| Cow position: | chr28:934178-934552 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 42-423 |
| Cow position: | chr28:1773461-1773071 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 40-411 |
| Cow position: | chr3:28678850-28678463 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 40-424 |
| Cow position: | chr3:78025464-78025858 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 1-403 |
| Cow position: | chr4:41336376-41335973 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 46-421 |
| Cow position: | chr4:44106659-44107031 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 1-416 |
| Cow position: | chr5:57948797-57948376 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 1-421 |
| Cow position: | chr5:51945580-51945154 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 1-423 |
| Cow position: | chr5:58767017-58767435 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 1-300 |
| Cow position: | chr7:37068147-37067845 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 1-341 |
| Cow position: | chr7:4153619-4153963 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 1-357 |
| Cow position: | chr7:50659208-50659572 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 1-395 |
| Cow position: | chr8:6782676-6783079 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 40-421 |
| Cow position: | chr8:15188897-15189291 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 66, 343 |
| Conread position: | 54-421 |
| Cow position: | chr8:8104395-8104779 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 1-336 |
| Cow position: | chr9:38714556-38714905 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 5-301 |
| Cow position: | chr9:60491000-60490710 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 40-419 |
| Cow position: | chr9:19007919-19008315 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 46-380 |
| Cow position: | chr9:916617-916277 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 158-384 |
| Cow position: | chr9:56042875-56043100 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 3-423 |
| Cow position: | chrX:4445321-4444905 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 38-399 |
| Cow position: | chrX:39764438-39764063 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 38-402 |
| Cow position: | chrX:20185073-20184702 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 175 |
| Conread position: | 38-421 |
| Cow position: | chrX:7548913-7549300 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 199 |
| Conread position: | 38-421 |
| Cow position: | chrX:23327954-23328358 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 235 |
| Conread position: | 39-399 |
| Cow position: | chrX:37814000-37813616 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 343 |
| Conread position: | 40-404 |
| Cow position: | chrX:2157002-2156631 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 205 |
| Conread position: | 51-412 |
| Cow position: | chrX:17524879-17525262 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 202 |
| Conread position: | 55-405 |
| Cow position: | chrX:24229864-24230196 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 47 |