Cow genome map
| Conread name: | reye1604b_m24r1.y1 |
| Conread position: | 2-257 |
| Cow position: | chr10:38849469-38849720 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 207, 48 |
| Conread position: | 3-236 |
| Cow position: | chr10:39878249-39878009 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 3-247 |
| Cow position: | chr10:64146110-64146359 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 3-258 |
| Cow position: | chr10:14842964-14843209 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 220, 22 |
| Conread position: | 3-272 |
| Cow position: | chr10:66899199-66898931 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 191, 259 |
| Conread position: | 4-248 |
| Cow position: | chr10:58597553-58597794 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 15-257 |
| Cow position: | chr10:21883982-21884228 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 31-271 |
| Cow position: | chr10:14853069-14853315 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 52 |
| Conread position: | 2-257 |
| Cow position: | chr11:41169874-41169615 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 218, 16 |
| Conread position: | 3-247 |
| Cow position: | chr11:9224726-9224496 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 1-257 |
| Cow position: | chr13:4942270-4942533 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 183, 17 |
| Conread position: | 1-233 |
| Cow position: | chr14:40341818-40342047 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 197, 108 |
| Conread position: | 3-247 |
| Cow position: | chr14:29580928-29581175 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 63-253 |
| Cow position: | chr14:33240287-33240475 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 178, 66 |
| Conread position: | 4-252 |
| Cow position: | chr15:4672204-4672458 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 185, 38 |
| Conread position: | 2-252 |
| Cow position: | chr16:2726808-2726539 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 3-252 |
| Cow position: | chr16:39824356-39824611 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 117, 150 |
| Conread position: | 3-257 |
| Cow position: | chr16:27714386-27714141 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 242, 14 |
| Conread position: | 7-235 |
| Cow position: | chr16:41762263-41762490 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 189 |
| Conread position: | 252-405 |
| Cow position: | chr16:37481609-37481763 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 137 |
| Conread position: | 2-240 |
| Cow position: | chr17:24029011-24028765 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 188 |
| Conread position: | 5-246 |
| Cow position: | chr18:18495837-18495605 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 5-238 |
| Cow position: | chr19:48860995-48860766 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 158, 27 |
| Conread position: | 1-251 |
| Cow position: | chr2:64224092-64223845 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 163, 22 |
| Conread position: | 3-246 |
| Cow position: | chr2:387132-386885 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 140 |
| Conread position: | 4-258 |
| Cow position: | chr2:19225529-19225783 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 177, 151 |
| Conread position: | 5-218 |
| Cow position: | chr2:46534444-46534233 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 5-253 |
| Cow position: | chr2:38374437-38374680 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 108, 114 |
| Conread position: | 39-257 |
| Cow position: | chr2:25743227-25743451 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 36 |
| Conread position: | 2-257 |
| Cow position: | chr20:13764070-13764324 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 218, 16 |
| Conread position: | 3-257 |
| Cow position: | chr20:22210215-22210460 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 178, 9 |
| Conread position: | 4-268 |
| Cow position: | chr20:32349435-32349700 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 226, 109 |
| Conread position: | 2-268 |
| Cow position: | chr21:47646611-47646872 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 5-246 |
| Cow position: | chr21:21519881-21520125 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 174, 125 |
| Conread position: | 7-257 |
| Cow position: | chr21:4564751-4565004 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 27-252 |
| Cow position: | chr21:34594697-34594478 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 38-233 |
| Cow position: | chr21:49296205-49296395 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 1-257 |
| Cow position: | chr22:36579172-36578906 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-251 |
| Cow position: | chr22:33351790-33352032 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 176, 93 |
| Conread position: | 27-252 |
| Cow position: | chr22:13673678-13673448 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 1-257 |
| Cow position: | chr23:11077080-11076817 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 102-264 |
| Cow position: | chr23:2243859-2244024 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 27-252 |
| Cow position: | chr24:5888034-5887806 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 53-256 |
| Cow position: | chr24:36298679-36298882 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 164, 64 |
| Conread position: | 5-257 |
| Cow position: | chr25:13454423-13454176 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 215, 29 |
| Conread position: | 20-258 |
| Cow position: | chr25:18251741-18251508 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-263 |
| Cow position: | chr26:34012844-34013108 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 111, 120 |
| Conread position: | 5-257 |
| Cow position: | chr26:5676280-5676543 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 6-246 |
| Cow position: | chr26:35337008-35336765 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 94 |
| Conread position: | 34-236 |
| Cow position: | chr26:5218983-5218786 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 27-252 |
| Cow position: | chr27:25084712-25084931 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 86, 108 |
| Conread position: | 3-257 |
| Cow position: | chr28:10646266-10646017 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 3-257 |
| Cow position: | chr3:6686842-6687089 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 109 |
| Conread position: | 5-218 |
| Cow position: | chr3:33845643-33845435 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 2-241 |
| Cow position: | chr4:34178397-34178153 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 137, 178 |
| Conread position: | 2-257 |
| Cow position: | chr4:12240377-12240124 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 252, 16 |
| Conread position: | 4-220 |
| Cow position: | chr4:20181882-20182086 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 5-252 |
| Cow position: | chr4:50975469-50975716 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 254-401 |
| Cow position: | chr4:952177-952030 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 4-252 |
| Cow position: | chr5:58151842-58151597 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 177, 109 |
| Conread position: | 104-264 |
| Cow position: | chr5:11115712-11115546 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 140 |
| Conread position: | 2-218 |
| Cow position: | chr6:47042135-47041924 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-218 |
| Cow position: | chr6:66193436-66193230 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 3-240 |
| Cow position: | chr6:65842694-65842933 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 217, 15 |
| Conread position: | 4-258 |
| Cow position: | chr6:10632634-10632884 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 91 |
| Conread position: | 10-257 |
| Cow position: | chr6:65897885-65897637 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 184, 24 |
| Conread position: | 68-257 |
| Cow position: | chr6:87785-87977 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 152, 110 |
| Conread position: | 5-257 |
| Cow position: | chr7:20533120-20533375 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 108, 129 |
| Conread position: | 3-257 |
| Cow position: | chr8:41644316-41644072 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-247 |
| Cow position: | chr8:2235626-2235377 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 27-252 |
| Cow position: | chr8:6726617-6726377 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 169 |
| Conread position: | 27-257 |
| Cow position: | chr8:23135230-23134996 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 154, 221 |
| Conread position: | 27-218 |
| Cow position: | chr9:54925579-54925763 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 31-257 |
| Cow position: | chr9:26736787-26737021 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 85-257 |
| Cow position: | chr9:30191294-30191122 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 158 |
| Conread position: | 3-247 |
| Cow position: | chrX:35025966-35026206 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 216, 37 |
| Conread position: | 3-256 |
| Cow position: | chrX:20695904-20695654 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 4-218 |
| Cow position: | chrX:13182212-13182006 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 71, 0 |