Cow genome map

Conread name: reye1630b_k12r1.y1

Conread position: 174-339
Cow position: chr10:37668128-37668295 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 179-333
Cow position: chr10:10750229-10750384 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 180-309
Cow position: chr10:5151367-5151237 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 121

Conread position: 180-314
Cow position: chr10:30523042-30523177 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 180-333
Cow position: chr10:8449522-8449367 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 180-334
Cow position: chr10:39228168-39228013 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 180-334
Cow position: chr10:46327711-46327556 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 7

Conread position: 180-335
Cow position: chr10:31027623-31027779 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 101

Conread position: 180-339
Cow position: chr10:22527881-22528041 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 57

Conread position: 180-339
Cow position: chr10:24756432-24756279 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 180-339
Cow position: chr10:24781209-24781050 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr10:28395281-28395437 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 102

Conread position: 180-339
Cow position: chr10:30352870-30352710 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 11

Conread position: 180-339
Cow position: chr10:30360541-30360382 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 134

Conread position: 180-339
Cow position: chr10:35778880-35779039 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr10:37415810-37415650 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 28

Conread position: 180-339
Cow position: chr10:38014387-38014228 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 79, 101

Conread position: 180-339
Cow position: chr10:40163913-40164071 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 132

Conread position: 180-339
Cow position: chr10:52695706-52695866 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr10:53674846-53674687 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 111

Conread position: 180-339
Cow position: chr10:54504625-54504468 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 180-341
Cow position: chr10:15462512-15462350 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 180-341
Cow position: chr10:37529245-37529405 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 33

Conread position: 181-334
Cow position: chr10:56828298-56828450 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 56

Conread position: 181-339
Cow position: chr10:33215823-33215663 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 183-341
Cow position: chr10:31362196-31362347 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 188-313
Cow position: chr10:6199032-6198907 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 123

Conread position: 188-314
Cow position: chr10:23056065-23056191 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-315
Cow position: chr10:23506475-23506604 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 188-327
Cow position: chr10:21422144-21422285 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 188-327
Cow position: chr10:59159083-59159222 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-337
Cow position: chr10:17022551-17022699 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 188-339
Cow position: chr10:7366771-7366923 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 39

Conread position: 188-339
Cow position: chr10:8923292-8923140 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 188-339
Cow position: chr10:15817778-15817930 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 188-339
Cow position: chr10:20095773-20095620 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr10:38725670-38725520 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 36

Conread position: 188-339
Cow position: chr10:46195798-46195645 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 133, 96

Conread position: 188-339
Cow position: chr10:47773743-47773592 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chr10:51944376-51944221 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr10:69997788-69997940 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 191-339
Cow position: chr10:2613378-2613229 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 191-339
Cow position: chr10:22520152-22520301 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 191-339
Cow position: chr10:25260265-25260116 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 91

Conread position: 191-339
Cow position: chr10:33665852-33665701 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 191-339
Cow position: chr10:45371066-45370917 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 192-339
Cow position: chr10:6543734-6543585 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 194-339
Cow position: chr10:37913182-37913325 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 197-339
Cow position: chr10:14947265-14947124 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 89

Conread position: 197-339
Cow position: chr10:21657430-21657286 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 212-333
Cow position: chr10:34655122-34655244 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 214-335
Cow position: chr10:24971624-24971746 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 221-338
Cow position: chr10:29090712-29090828 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 228-341
Cow position: chr10:35791905-35791793 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 71

Conread position: 234-339
Cow position: chr10:35026446-35026341 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 17

Conread position: 174-314
Cow position: chr11:26845560-26845701 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 176-339
Cow position: chr11:23128508-23128674 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 178-339
Cow position: chr11:33341116-33341278 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 179-339
Cow position: chr11:25387096-25386932 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 179-341
Cow position: chr11:955395-955232 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 180-289
Cow position: chr11:16342202-16342312 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 180-306
Cow position: chr11:69119320-69119193 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 180-316
Cow position: chr11:17036501-17036638 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 180-333
Cow position: chr11:40608568-40608722 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 7

Conread position: 180-335
Cow position: chr11:30830587-30830743 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 180-337
Cow position: chr11:24937692-24937534 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 180-338
Cow position: chr11:42792946-42793103 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 180-339
Cow position: chr11:10213537-10213695 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 126

Conread position: 180-339
Cow position: chr11:20238703-20238540 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 180-339
Cow position: chr11:39499383-39499227 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 113

Conread position: 180-339
Cow position: chr11:44636727-44636889 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 180-339
Cow position: chr11:45646566-45646726 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr11:47772363-47772523 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 134

Conread position: 180-339
Cow position: chr11:59702513-59702355 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 119

Conread position: 180-339
Cow position: chr11:65431081-65430928 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 45

Conread position: 180-341
Cow position: chr11:34121225-34121067 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 119

Conread position: 181-339
Cow position: chr11:20761873-20761715 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 182-334
Cow position: chr11:71390536-71390690 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 182-339
Cow position: chr11:65762566-65762731 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 187-333
Cow position: chr11:33824868-33825016 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 188-319
Cow position: chr11:16251225-16251358 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 188-338
Cow position: chr11:50152795-50152946 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 188-339
Cow position: chr11:21497541-21497390 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 62

Conread position: 188-339
Cow position: chr11:35580279-35580126 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 188-339
Cow position: chr11:39115514-39115362 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr11:73924544-73924691 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 188-339
Cow position: chr11:80923302-80923455 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 188-341
Cow position: chr11:2575885-2576037 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 20

Conread position: 188-341
Cow position: chr11:30955019-30954865 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 0

Conread position: 191-337
Cow position: chr11:27248509-27248363 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 191-339
Cow position: chr11:69075926-69075777 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 18

Conread position: 191-339
Cow position: chr11:80556238-80556089 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 70, 45

Conread position: 191-341
Cow position: chr11:2917570-2917719 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 191-341
Cow position: chr11:35153808-35153958 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 192-339
Cow position: chr11:47545149-47544999 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 192-339
Cow position: chr11:52297206-52297352 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 39

Conread position: 193-324
Cow position: chr11:29960312-29960179 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 195-334
Cow position: chr11:80537500-80537360 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 120

Conread position: 211-339
Cow position: chr11:59155881-59156010 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 71

Conread position: 211-339
Cow position: chr11:70740981-70741107 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 40

Conread position: 213-339
Cow position: chr11:17661084-17660963 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 214-339
Cow position: chr11:11558164-11558036 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 251-339
Cow position: chr11:50778330-50778242 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-339
Cow position: chr12:19507644-19507480 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 157

Conread position: 180-308
Cow position: chr12:39486430-39486306 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 180-327
Cow position: chr12:16670273-16670125 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 180-327
Cow position: chr12:18518679-18518527 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 133

Conread position: 180-339
Cow position: chr12:5906062-5905903 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 90, 152

Conread position: 180-339
Cow position: chr12:17269808-17269647 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 180-339
Cow position: chr12:18420916-18421075 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 109

Conread position: 180-341
Cow position: chr12:15531064-15530904 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 182-314
Cow position: chr12:45820362-45820495 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 188-335
Cow position: chr12:15089514-15089366 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 113

Conread position: 188-337
Cow position: chr12:20776923-20777073 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr12:17031613-17031463 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 188-339
Cow position: chr12:37169948-37170095 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 189-308
Cow position: chr12:5631882-5632003 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 62

Conread position: 190-339
Cow position: chr12:29770576-29770725 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 79

Conread position: 190-339
Cow position: chr12:37770873-37770724 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 89

Conread position: 191-320
Cow position: chr12:25561365-25561237 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 192-311
Cow position: chr12:11056869-11056750 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 192-327
Cow position: chr12:26317459-26317322 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 144-327
Cow position: chr13:27199094-27199273 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 33

Conread position: 179-309
Cow position: chr13:25817466-25817597 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 180-320
Cow position: chr13:19279036-19279176 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 25

Conread position: 180-327
Cow position: chr13:890228-890085 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 180-327
Cow position: chr13:20473741-20473595 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-327
Cow position: chr13:20679280-20679426 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 180-333
Cow position: chr13:19022212-19022368 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 180-337
Cow position: chr13:17569160-17569003 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 24

Conread position: 180-337
Cow position: chr13:54702127-54702284 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 180-338
Cow position: chr13:15529093-15528934 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 180-338
Cow position: chr13:54389080-54388921 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr13:11381782-11381623 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 116

Conread position: 180-339
Cow position: chr13:15194794-15194633 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 180-339
Cow position: chr13:17021785-17021630 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 180-339
Cow position: chr13:18696781-18696942 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr13:19883096-19882937 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 120

Conread position: 180-339
Cow position: chr13:21135960-21135801 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr13:21176381-21176223 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr13:22085805-22085645 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 180-339
Cow position: chr13:24369522-24369679 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 180-339
Cow position: chr13:34263429-34263270 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 77, 93

Conread position: 180-339
Cow position: chr13:41806713-41806874 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr13:46329665-46329505 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr13:53573910-53574069 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 84, 8

Conread position: 180-339
Cow position: chr13:55316250-55316090 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr13:62518389-62518232 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 104

Conread position: 180-341
Cow position: chr13:8374832-8374671 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 180-341
Cow position: chr13:15885081-15884919 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 180-341
Cow position: chr13:20684181-20684020 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 183-339
Cow position: chr13:28652747-28652898 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 19

Conread position: 188-316
Cow position: chr13:34281624-34281752 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 188-332
Cow position: chr13:56686380-56686524 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 121

Conread position: 188-333
Cow position: chr13:20288284-20288423 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 188-337
Cow position: chr13:18852026-18852177 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 188-338
Cow position: chr13:45023263-45023114 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 188-339
Cow position: chr13:971949-971794 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 188-339
Cow position: chr13:13260949-13261103 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 188-339
Cow position: chr13:17966259-17966110 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr13:18058301-18058147 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr13:20666440-20666288 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 117

Conread position: 188-339
Cow position: chr13:20880981-20880827 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr13:32826509-32826357 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr13:43480006-43480156 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 75

Conread position: 188-339
Cow position: chr13:48037569-48037720 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chr13:55674259-55674110 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 188-341
Cow position: chr13:15166764-15166920 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 24

Conread position: 191-339
Cow position: chr13:17439819-17439671 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 192-338
Cow position: chr13:12619162-12619016 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 192-339
Cow position: chr13:24585996-24586140 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 193-339
Cow position: chr13:52922049-52922191 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 199-339
Cow position: chr13:17292176-17292034 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 213-339
Cow position: chr13:3701412-3701537 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 218-339
Cow position: chr13:18172315-18172437 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 180-335
Cow position: chr14:20640631-20640475 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 20

Conread position: 180-337
Cow position: chr14:16760398-16760550 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 52

Conread position: 180-339
Cow position: chr14:26433244-26433088 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 131

Conread position: 180-339
Cow position: chr14:37131651-37131811 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 180-339
Cow position: chr14:41210852-41211009 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 78

Conread position: 180-339
Cow position: chr14:42154974-42154808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 181-327
Cow position: chr14:41749760-41749614 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 44

Conread position: 181-339
Cow position: chr14:15492593-15492752 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 186-339
Cow position: chr14:8750075-8750231 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 188-327
Cow position: chr14:16549997-16549860 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 188-338
Cow position: chr14:10078274-10078424 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 76

Conread position: 188-338
Cow position: chr14:27591951-27591799 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr14:23080761-23080608 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 63

Conread position: 191-338
Cow position: chr14:33791197-33791341 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 191-339
Cow position: chr14:16256775-16256922 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 94

Conread position: 191-339
Cow position: chr14:19372348-19372497 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 192-332
Cow position: chr14:26442333-26442191 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 194-339
Cow position: chr14:18345720-18345578 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 94

Conread position: 197-339
Cow position: chr14:24607979-24608122 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 173-337
Cow position: chr15:33306146-33306310 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 51

Conread position: 179-339
Cow position: chr15:23696867-23696708 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 180-327
Cow position: chr15:38877259-38877115 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 105

Conread position: 180-339
Cow position: chr15:11011558-11011402 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr15:12304683-12304844 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 79

Conread position: 180-339
Cow position: chr15:20391230-20391072 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 180-339
Cow position: chr15:30470927-30470767 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr15:36259559-36259400 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr15:36353713-36353871 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 108

Conread position: 181-339
Cow position: chr15:16307468-16307615 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 188-327
Cow position: chr15:25906960-25907108 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 188-333
Cow position: chr15:14888592-14888444 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 188-337
Cow position: chr15:2380406-2380557 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr15:4093880-4093730 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr15:13515419-13515571 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 188-339
Cow position: chr15:14870793-14870945 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 120

Conread position: 188-339
Cow position: chr15:24128081-24128228 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 124

Conread position: 191-313
Cow position: chr15:18647430-18647554 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 198-324
Cow position: chr15:16261376-16261501 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 212-339
Cow position: chr15:6530771-6530646 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 212-339
Cow position: chr15:39598319-39598445 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 214-339
Cow position: chr15:23487089-23486965 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 179-313
Cow position: chr16:20069878-20069744 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 83

Conread position: 179-329
Cow position: chr16:45678024-45677879 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 179-333
Cow position: chr16:17945567-17945412 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 179-339
Cow position: chr16:23729878-23730040 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 180-309
Cow position: chr16:27659701-27659834 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 105

Conread position: 180-316
Cow position: chr16:34220231-34220093 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 180-327
Cow position: chr16:21040072-21039926 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 109

Conread position: 180-332
Cow position: chr16:40514437-40514587 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 180-334
Cow position: chr16:7505134-7504979 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 180-336
Cow position: chr16:50873125-50873275 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 180-337
Cow position: chr16:26649584-26649741 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr16:10592476-10592321 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 180-339
Cow position: chr16:11105599-11105439 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr16:13689711-13689551 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 180-339
Cow position: chr16:17903600-17903763 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr16:33226493-33226652 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 180-341
Cow position: chr16:25839665-25839503 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 181-335
Cow position: chr16:40562276-40562121 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 182-333
Cow position: chr16:4910482-4910634 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 182-334
Cow position: chr16:32970037-32970187 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 21

Conread position: 188-337
Cow position: chr16:45139708-45139560 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 188-338
Cow position: chr16:9905127-9904978 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr16:48340657-48340810 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 63

Conread position: 188-339
Cow position: chr16:54226560-54226712 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr16:56231864-56231713 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 93

Conread position: 191-314
Cow position: chr16:17288981-17288858 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 60

Conread position: 191-339
Cow position: chr16:24855577-24855428 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 192-339
Cow position: chr16:33704838-33704693 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 11

Conread position: 192-339
Cow position: chr16:34753927-34754074 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 193-339
Cow position: chr16:24148193-24148044 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 194-337
Cow position: chr16:11791044-11790905 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 83

Conread position: 212-339
Cow position: chr16:35168743-35168615 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 89

Conread position: 179-338
Cow position: chr17:40406530-40406372 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 47

Conread position: 180-309
Cow position: chr17:24824327-24824199 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 180-309
Cow position: chr17:25800796-25800925 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 82

Conread position: 180-313
Cow position: chr17:32471696-32471831 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 180-314
Cow position: chr17:22016999-22017135 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 180-327
Cow position: chr17:34790979-34791127 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 180-329
Cow position: chr17:32138339-32138482 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 180-334
Cow position: chr17:21114869-21115018 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 90

Conread position: 180-334
Cow position: chr17:31037292-31037448 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-334
Cow position: chr17:40639032-40638882 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 180-338
Cow position: chr17:4601460-4601616 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 82

Conread position: 180-338
Cow position: chr17:33288572-33288726 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 117

Conread position: 180-339
Cow position: chr17:908825-908672 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 180-339
Cow position: chr17:3577624-3577469 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 109

Conread position: 180-339
Cow position: chr17:5422984-5423143 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 122

Conread position: 180-339
Cow position: chr17:6423849-6423688 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr17:11664500-11664661 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 136

Conread position: 180-339
Cow position: chr17:12591259-12591094 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 180-339
Cow position: chr17:33933660-33933821 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr17:38647146-38646987 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 21

Conread position: 180-341
Cow position: chr17:24587709-24587547 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 181-339
Cow position: chr17:12536381-12536541 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 182-339
Cow position: chr17:32989559-32989409 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 182-339
Cow position: chr17:32993541-32993691 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 187-339
Cow position: chr17:25514045-25514196 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 188-325
Cow position: chr17:5372450-5372588 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 49

Conread position: 188-337
Cow position: chr17:18109007-18109156 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 188-338
Cow position: chr17:4225422-4225565 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 69

Conread position: 188-338
Cow position: chr17:11368772-11368922 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 131

Conread position: 188-339
Cow position: chr17:1040822-1040673 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 188-339
Cow position: chr17:1410161-1410312 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chr17:15333633-15333785 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr17:21003749-21003901 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr17:25901277-25901124 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 188-339
Cow position: chr17:28284951-28285103 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 110

Conread position: 188-340
Cow position: chr17:21478842-21478996 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 188-341
Cow position: chr17:12447324-12447477 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 64

Conread position: 191-333
Cow position: chr17:23516868-23517009 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 17

Conread position: 191-339
Cow position: chr17:21758067-21758211 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 194-339
Cow position: chr17:10510586-10510731 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 205-339
Cow position: chr17:34207755-34207891 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 212-341
Cow position: chr17:20990140-20990269 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 6

Conread position: 214-326
Cow position: chr17:20269784-20269671 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 214-339
Cow position: chr17:32017825-32017952 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 180-309
Cow position: chr18:11684993-11684864 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 180-327
Cow position: chr18:47512017-47511871 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 180-333
Cow position: chr18:45571025-45570874 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 180-337
Cow position: chr18:9365932-9365772 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 180-338
Cow position: chr18:49038473-49038316 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 130

Conread position: 180-339
Cow position: chr18:4539871-4540025 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 180-339
Cow position: chr18:8300030-8299867 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr18:20126318-20126159 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 101

Conread position: 180-339
Cow position: chr18:29991499-29991664 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr18:33407628-33407469 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr18:48713562-48713403 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 20

Conread position: 180-339
Cow position: chr18:54130320-54130480 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 180-341
Cow position: chr18:28101644-28101483 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 29

Conread position: 180-341
Cow position: chr18:33299915-33299753 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 181-314
Cow position: chr18:55119882-55119748 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 182-341
Cow position: chr18:9557987-9557835 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 182-341
Cow position: chr18:11183951-11183797 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 188-325
Cow position: chr18:31711561-31711698 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 119

Conread position: 188-327
Cow position: chr18:44548909-44549049 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 188-337
Cow position: chr18:4884514-4884655 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 101

Conread position: 188-339
Cow position: chr18:11691405-11691554 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 91

Conread position: 188-339
Cow position: chr18:13507733-13507885 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr18:25647245-25647398 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr18:29058495-29058640 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 188-339
Cow position: chr18:55505410-55505261 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 188-341
Cow position: chr18:29356621-29356775 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 191-333
Cow position: chr18:49841282-49841138 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 191-339
Cow position: chr18:12242277-12242131 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 119

Conread position: 191-339
Cow position: chr18:33008063-33007914 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 198-333
Cow position: chr18:3370894-3370758 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 201-339
Cow position: chr18:8104952-8105092 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 211-333
Cow position: chr18:42751628-42751752 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 212-339
Cow position: chr18:33896445-33896574 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 108

Conread position: 213-339
Cow position: chr18:42432114-42432240 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 179-324
Cow position: chr19:19549511-19549658 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 179-337
Cow position: chr19:34619994-34620153 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 180-301
Cow position: chr19:12052813-12052934 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 67

Conread position: 180-301
Cow position: chr19:12067778-12067657 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 67

Conread position: 180-332
Cow position: chr19:13757283-13757131 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 72

Conread position: 180-334
Cow position: chr19:4092546-4092389 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 7

Conread position: 180-334
Cow position: chr19:25628103-25628253 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 116

Conread position: 180-335
Cow position: chr19:15719585-15719739 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 51

Conread position: 180-339
Cow position: chr19:22043319-22043476 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chr19:33823352-33823192 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 0

Conread position: 180-339
Cow position: chr19:35742195-35742036 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr19:39576535-39576695 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr19:41946216-41946061 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 180-341
Cow position: chr19:21199172-21199010 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 181-341
Cow position: chr19:35107561-35107401 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 43

Conread position: 182-320
Cow position: chr19:16567184-16567049 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 188-314
Cow position: chr19:33980984-33980861 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 188-326
Cow position: chr19:24145043-24144909 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 188-338
Cow position: chr19:7668727-7668575 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 188-338
Cow position: chr19:22765648-22765497 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 86, 56

Conread position: 188-338
Cow position: chr19:33903398-33903546 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 188-338
Cow position: chr19:48960423-48960272 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 188-339
Cow position: chr19:3621455-3621306 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr19:13129901-13129748 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr19:15767228-15767076 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 94

Conread position: 188-339
Cow position: chr19:21378444-21378594 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 100

Conread position: 188-339
Cow position: chr19:23786219-23786068 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chr19:35018217-35018369 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 131

Conread position: 188-339
Cow position: chr19:39057267-39057119 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 192-341
Cow position: chr19:35762228-35762379 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 94

Conread position: 193-337
Cow position: chr19:20693520-20693374 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 202-341
Cow position: chr19:16621340-16621479 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 50

Conread position: 205-339
Cow position: chr19:38392813-38392677 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 212-339
Cow position: chr19:8033749-8033621 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 212-339
Cow position: chr19:15068007-15068127 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 212-339
Cow position: chr19:25807299-25807427 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 212-339
Cow position: chr19:52158539-52158410 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 212-341
Cow position: chr19:5185247-5185371 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 216-335
Cow position: chr19:24759885-24760005 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 172-341
Cow position: chr2:21284984-21284819 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 174-308
Cow position: chr2:72183440-72183577 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 174-332
Cow position: chr2:39798294-39798133 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 176-326
Cow position: chr2:992205-992054 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 177-339
Cow position: chr2:29121931-29121772 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 140

Conread position: 178-339
Cow position: chr2:53851484-53851323 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 179-309
Cow position: chr2:13684745-13684614 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 179-327
Cow position: chr2:25448374-25448228 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 73

Conread position: 179-327
Cow position: chr2:82580882-82581032 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 39

Conread position: 179-334
Cow position: chr2:46331109-46330952 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 179-339
Cow position: chr2:38362319-38362481 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 179-339
Cow position: chr2:45912586-45912747 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 179-339
Cow position: chr2:68487960-68488118 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 180-320
Cow position: chr2:40257367-40257509 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 180-336
Cow position: chr2:75600767-75600614 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-337
Cow position: chr2:44222869-44222711 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 28

Conread position: 180-339
Cow position: chr2:79913-80073 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 180-339
Cow position: chr2:827566-827727 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr2:30144761-30144609 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 11

Conread position: 180-339
Cow position: chr2:32115125-32114963 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr2:41248616-41248454 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 180-339
Cow position: chr2:42927405-42927560 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 180-339
Cow position: chr2:43790145-43789990 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 180-339
Cow position: chr2:44170604-44170447 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 64

Conread position: 180-339
Cow position: chr2:45542354-45542508 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 68

Conread position: 180-339
Cow position: chr2:54810807-54810967 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chr2:69747571-69747732 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr2:70704303-70704142 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 181-338
Cow position: chr2:74260502-74260344 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 71

Conread position: 181-339
Cow position: chr2:6539194-6539348 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 188-314
Cow position: chr2:58035144-58035018 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 113

Conread position: 188-326
Cow position: chr2:44051348-44051210 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 188-327
Cow position: chr2:45535503-45535363 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 188-333
Cow position: chr2:42226229-42226376 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 188-333
Cow position: chr2:47147945-47147802 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 62

Conread position: 188-338
Cow position: chr2:13001836-13001694 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr2:1638641-1638489 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr2:1762832-1762683 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 93

Conread position: 188-339
Cow position: chr2:19494251-19494097 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr2:37920748-37920895 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 188-339
Cow position: chr2:43577760-43577910 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr2:45499165-45499315 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr2:45642448-45642603 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 188-339
Cow position: chr2:46189059-46189211 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 188-339
Cow position: chr2:46202299-46202158 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 188-339
Cow position: chr2:61974837-61974686 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 188-341
Cow position: chr2:77157308-77157463 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 191-314
Cow position: chr2:69350531-69350656 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 191-339
Cow position: chr2:7573470-7573617 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 52

Conread position: 191-339
Cow position: chr2:17805728-17805876 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 116

Conread position: 191-339
Cow position: chr2:41452267-41452121 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 191-339
Cow position: chr2:46033369-46033219 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 191-339
Cow position: chr2:80865820-80865967 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 59

Conread position: 198-337
Cow position: chr2:38628936-38628796 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 212-339
Cow position: chr2:56828555-56828681 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 212-339
Cow position: chr2:68716655-68716782 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 212-341
Cow position: chr2:21078595-21078464 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 213-316
Cow position: chr2:47015321-47015425 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 213-339
Cow position: chr2:1658509-1658381 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 214-339
Cow position: chr2:80324841-80324966 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 38

Conread position: 214-341
Cow position: chr2:64212545-64212673 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 174-339
Cow position: chr20:14806981-14806815 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 179-334
Cow position: chr20:7624160-7624312 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 24

Conread position: 179-339
Cow position: chr20:7211128-7210969 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 179-339
Cow position: chr20:39518095-39517936 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 180-314
Cow position: chr20:12581867-12582002 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 180-333
Cow position: chr20:38090000-38089847 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 180-334
Cow position: chr20:19363275-19363429 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 109

Conread position: 180-337
Cow position: chr20:8547155-8546997 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 132

Conread position: 180-339
Cow position: chr20:8578336-8578177 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 71

Conread position: 180-339
Cow position: chr20:11542201-11542354 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 40

Conread position: 180-339
Cow position: chr20:12420531-12420689 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 180-339
Cow position: chr20:18379466-18379311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 125

Conread position: 180-339
Cow position: chr20:21204445-21204289 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 180-339
Cow position: chr20:23792691-23792540 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 180-339
Cow position: chr20:25162038-25162199 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 180-339
Cow position: chr20:26996617-26996463 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 180-339
Cow position: chr20:31740132-31740291 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 152

Conread position: 180-341
Cow position: chr20:20203305-20203143 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 188-316
Cow position: chr20:8702838-8702965 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 15

Conread position: 188-329
Cow position: chr20:17100442-17100300 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr20:8308099-8307946 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 188-339
Cow position: chr20:24069885-24069733 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 188-339
Cow position: chr20:39398560-39398415 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 14

Conread position: 189-339
Cow position: chr20:39266880-39267030 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 16

Conread position: 191-337
Cow position: chr20:28982778-28982630 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 192-334
Cow position: chr20:39019771-39019628 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 192-338
Cow position: chr20:28605285-28605134 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 197-339
Cow position: chr20:38768390-38768527 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 212-327
Cow position: chr20:38818062-38817947 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 212-341
Cow position: chr20:32463465-32463594 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 227-337
Cow position: chr20:13804989-13804878 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 177-339
Cow position: chr21:18041735-18041898 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 180-329
Cow position: chr21:17856652-17856502 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 180-329
Cow position: chr21:29214052-29214195 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 180-334
Cow position: chr21:22014298-22014142 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 34

Conread position: 180-336
Cow position: chr21:37480063-37479912 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 115

Conread position: 180-338
Cow position: chr21:641695-641537 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr21:297862-297703 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 131

Conread position: 180-339
Cow position: chr21:724777-724936 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 11

Conread position: 180-339
Cow position: chr21:11644858-11645020 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr21:16187699-16187858 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 113

Conread position: 180-339
Cow position: chr21:23192401-23192564 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 180-339
Cow position: chr21:29069218-29069379 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 180-339
Cow position: chr21:38121209-38121051 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 119

Conread position: 180-341
Cow position: chr21:47465010-47465174 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 28

Conread position: 187-326
Cow position: chr21:27229690-27229831 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 187-339
Cow position: chr21:4280571-4280722 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 56

Conread position: 188-334
Cow position: chr21:5392435-5392585 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 188-334
Cow position: chr21:8349431-8349283 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 188-337
Cow position: chr21:20192997-20192849 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 62

Conread position: 188-338
Cow position: chr21:34654173-34654028 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 188-339
Cow position: chr21:20260219-20260371 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr21:22861102-22860949 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr21:29485082-29484929 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr21:30222445-30222294 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 123

Conread position: 188-339
Cow position: chr21:33982707-33982856 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr21:44214227-44214074 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 48

Conread position: 188-339
Cow position: chr21:44515364-44515213 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 141, 124

Conread position: 188-339
Cow position: chr21:45262710-45262862 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 101

Conread position: 191-315
Cow position: chr21:8426543-8426421 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 191-339
Cow position: chr21:46264267-46264122 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 192-341
Cow position: chr21:13488623-13488470 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 178-339
Cow position: chr22:12341240-12341078 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 178-339
Cow position: chr22:26097576-26097737 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-327
Cow position: chr22:285320-285464 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 179-338
Cow position: chr22:21393276-21393435 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 179-339
Cow position: chr22:6327727-6327884 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 106

Conread position: 179-339
Cow position: chr22:22160768-22160607 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 179-339
Cow position: chr22:30094289-30094128 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 136

Conread position: 179-339
Cow position: chr22:44717763-44717595 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 179-341
Cow position: chr22:4060905-4061065 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 180-326
Cow position: chr22:10631427-10631280 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 180-326
Cow position: chr22:34104631-34104780 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 180-333
Cow position: chr22:15567975-15568127 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 55

Conread position: 180-338
Cow position: chr22:4119521-4119681 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 180-338
Cow position: chr22:4645814-4645657 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 180-338
Cow position: chr22:9127449-9127290 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 73

Conread position: 180-338
Cow position: chr22:12803344-12803503 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 180-339
Cow position: chr22:15039143-15039299 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 180-339
Cow position: chr22:21502786-21502626 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 112

Conread position: 180-339
Cow position: chr22:25742908-25743068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 113

Conread position: 180-339
Cow position: chr22:38439116-38439271 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 101

Conread position: 180-341
Cow position: chr22:8481685-8481524 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 88

Conread position: 180-341
Cow position: chr22:13300452-13300294 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 76

Conread position: 181-339
Cow position: chr22:15090782-15090624 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 22

Conread position: 182-339
Cow position: chr22:42635393-42635548 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 98

Conread position: 187-339
Cow position: chr22:4017511-4017360 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 188-329
Cow position: chr22:40048590-40048446 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 188-339
Cow position: chr22:1563217-1563367 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 100

Conread position: 188-339
Cow position: chr22:3993643-3993495 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 188-339
Cow position: chr22:5616335-5616191 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr22:10315112-10314958 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 123

Conread position: 188-339
Cow position: chr22:12527087-12527242 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 52

Conread position: 188-339
Cow position: chr22:13011235-13011386 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 139

Conread position: 188-339
Cow position: chr22:17152710-17152564 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 188-339
Cow position: chr22:18259255-18259107 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 188-339
Cow position: chr22:21295691-21295841 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 126

Conread position: 188-339
Cow position: chr22:25387360-25387207 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 123

Conread position: 188-339
Cow position: chr22:30699214-30699062 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 140

Conread position: 188-339
Cow position: chr22:41270968-41271116 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 191-339
Cow position: chr22:590369-590222 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 108

Conread position: 191-339
Cow position: chr22:1591054-1590906 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 191-339
Cow position: chr22:4563392-4563243 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 97

Conread position: 192-339
Cow position: chr22:43119700-43119845 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 213-327
Cow position: chr22:26151104-26151217 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 214-339
Cow position: chr22:17993024-17993149 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 67

Conread position: 214-339
Cow position: chr22:36569544-36569666 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 227-339
Cow position: chr22:9734847-9734737 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 179-334
Cow position: chr23:2501806-2501960 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 180-310
Cow position: chr23:18286239-18286109 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 61

Conread position: 180-314
Cow position: chr23:3293742-3293605 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 180-337
Cow position: chr23:1876758-1876601 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 180-337
Cow position: chr23:5732597-5732440 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 13

Conread position: 180-339
Cow position: chr23:1883441-1883282 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 116

Conread position: 180-339
Cow position: chr23:4980499-4980657 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 180-339
Cow position: chr23:5795524-5795366 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 72, 23

Conread position: 180-339
Cow position: chr23:16881116-16881274 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chr23:21764969-21764806 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 181-314
Cow position: chr23:21452684-21452818 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 69

Conread position: 181-339
Cow position: chr23:534273-534117 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 37

Conread position: 188-308
Cow position: chr23:24966424-24966545 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 188-310
Cow position: chr23:21439960-21440084 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 188-334
Cow position: chr23:24867348-24867199 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 188-337
Cow position: chr23:1222198-1222349 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr23:11045526-11045374 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr23:12363579-12363730 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 191-334
Cow position: chr23:7845329-7845186 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 60

Conread position: 191-339
Cow position: chr23:17404875-17404727 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 216-339
Cow position: chr23:24809652-24809777 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 179-337
Cow position: chr24:33153797-33153641 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 180-297
Cow position: chr24:37823547-37823432 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 180-319
Cow position: chr24:2402348-2402486 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 180-326
Cow position: chr24:39791561-39791414 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr24:5754856-5754700 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr24:10499235-10499076 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 135

Conread position: 180-339
Cow position: chr24:18357032-18357191 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 107

Conread position: 180-339
Cow position: chr24:30897516-30897676 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr24:37650694-37650532 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 180-339
Cow position: chr24:43967479-43967639 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 180-341
Cow position: chr24:3430753-3430593 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 180-341
Cow position: chr24:36404122-36404284 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 181-339
Cow position: chr24:39833496-39833650 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 182-338
Cow position: chr24:37037918-37037760 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 188-309
Cow position: chr24:6487931-6487809 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 188-316
Cow position: chr24:37974969-37975096 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 97

Conread position: 188-339
Cow position: chr24:211999-211847 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 64

Conread position: 188-339
Cow position: chr24:1269798-1269660 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 188-339
Cow position: chr24:5141954-5141806 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 188-339
Cow position: chr24:20874694-20874542 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr24:27608086-27608236 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 121

Conread position: 188-341
Cow position: chr24:25885146-25885301 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 191-334
Cow position: chr24:35675548-35675412 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 191-341
Cow position: chr24:28062956-28062812 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 212-341
Cow position: chr24:40673441-40673573 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 180-312
Cow position: chr25:16319098-16319228 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 107

Conread position: 180-316
Cow position: chr25:4948004-4947870 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 95

Conread position: 180-334
Cow position: chr25:8120825-8120670 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 101

Conread position: 180-337
Cow position: chr25:9843218-9843062 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 108

Conread position: 180-338
Cow position: chr25:19364017-19364176 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 180-339
Cow position: chr25:11432903-11433069 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr25:11436765-11436922 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 138

Conread position: 180-339
Cow position: chr25:21191531-21191375 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 139

Conread position: 180-339
Cow position: chr25:21668291-21668130 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 180-339
Cow position: chr25:22531323-22531169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 23

Conread position: 180-339
Cow position: chr25:24052008-24051847 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 108

Conread position: 180-339
Cow position: chr25:33550551-33550393 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 0

Conread position: 180-341
Cow position: chr25:12509969-12510127 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 181-309
Cow position: chr25:7750493-7750364 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 181-326
Cow position: chr25:26642628-26642481 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 181-341
Cow position: chr25:36872399-36872244 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 27

Conread position: 182-341
Cow position: chr25:26679266-26679110 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 188-339
Cow position: chr25:14118129-14117977 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 191-339
Cow position: chr25:6961122-6961270 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 80

Conread position: 197-339
Cow position: chr25:11051556-11051414 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 123

Conread position: 212-337
Cow position: chr25:20785576-20785699 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 225-337
Cow position: chr25:8347508-8347395 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 245-339
Cow position: chr25:7449787-7449692 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 85

Conread position: 179-327
Cow position: chr26:8307466-8307607 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 180-309
Cow position: chr26:21636976-21637107 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 180-326
Cow position: chr26:23924911-23924764 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 70, 135

Conread position: 180-333
Cow position: chr26:677919-678070 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 180-338
Cow position: chr26:24240740-24240580 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 11

Conread position: 180-339
Cow position: chr26:13021084-13021242 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 180-339
Cow position: chr26:26888072-26888227 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 187-339
Cow position: chr26:10747576-10747723 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 44

Conread position: 188-334
Cow position: chr26:27491445-27491593 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 188-335
Cow position: chr26:5307196-5307043 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 188-337
Cow position: chr26:18651580-18651729 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 49

Conread position: 188-339
Cow position: chr26:12964641-12964793 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 212-339
Cow position: chr26:35302195-35302326 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 213-338
Cow position: chr26:8341483-8341357 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 179-338
Cow position: chr27:21669206-21669054 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 180-327
Cow position: chr27:8405910-8405767 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 180-327
Cow position: chr27:29504737-29504588 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 180-334
Cow position: chr27:17397542-17397386 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr27:426882-427039 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 11

Conread position: 180-339
Cow position: chr27:4672925-4673089 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 180-339
Cow position: chr27:19387931-19388084 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 180-339
Cow position: chr27:20789467-20789307 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 118

Conread position: 180-339
Cow position: chr27:22035465-22035307 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 121

Conread position: 180-339
Cow position: chr27:30890203-30890357 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 181-338
Cow position: chr27:19685800-19685642 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 187-333
Cow position: chr27:23483143-23483291 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 188-327
Cow position: chr27:24306746-24306886 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 188-334
Cow position: chr27:22171217-22171365 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 188-335
Cow position: chr27:23510907-23511056 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr27:16625817-16625968 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 191-336
Cow position: chr27:24321109-24321253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 191-338
Cow position: chr27:16103730-16103877 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 191-339
Cow position: chr27:20641412-20641271 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 59

Conread position: 192-339
Cow position: chr27:14670458-14670314 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 51

Conread position: 194-339
Cow position: chr27:15378553-15378408 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 95

Conread position: 194-339
Cow position: chr27:15454134-15454281 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 108

Conread position: 214-317
Cow position: chr27:23107958-23107853 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 179-307
Cow position: chr28:5128679-5128808 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 179-339
Cow position: chr28:2862918-2862757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 103

Conread position: 179-339
Cow position: chr28:8140532-8140374 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 179-339
Cow position: chr28:28164138-28163978 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 34

Conread position: 180-312
Cow position: chr28:12070280-12070154 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 29

Conread position: 180-333
Cow position: chr28:2960781-2960934 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 124

Conread position: 180-335
Cow position: chr28:16346482-16346632 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 180-339
Cow position: chr28:4834795-4834950 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 89

Conread position: 180-339
Cow position: chr28:8787589-8787431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 59

Conread position: 180-339
Cow position: chr28:13474349-13474192 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 180-339
Cow position: chr28:16370034-16370184 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 180-339
Cow position: chr28:26220307-26220147 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 181-334
Cow position: chr28:3914765-3914608 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 181-337
Cow position: chr28:7549010-7549166 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-339
Cow position: chr28:21845005-21844851 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 46

Conread position: 182-339
Cow position: chr28:11752092-11752249 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 67, 125

Conread position: 187-312
Cow position: chr28:5138949-5139078 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 188-334
Cow position: chr28:21868498-21868352 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-335
Cow position: chr28:3256839-3256693 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 188-335
Cow position: chr28:25128928-25128779 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 188-338
Cow position: chr28:11426500-11426649 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 188-339
Cow position: chr28:4588141-4587991 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 188-339
Cow position: chr28:5204236-5204084 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 188-339
Cow position: chr28:11585161-11585313 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chr28:22346062-22345911 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 106

Conread position: 191-339
Cow position: chr28:9285332-9285482 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 191-339
Cow position: chr28:20124822-20124675 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 191-340
Cow position: chr28:16246026-16246172 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 107

Conread position: 194-341
Cow position: chr28:25057001-25056860 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 212-334
Cow position: chr28:10762678-10762556 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 212-337
Cow position: chr28:7607959-7608086 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 217-339
Cow position: chr28:11079320-11079198 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 179-339
Cow position: chr29:26615677-26615837 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 180-312
Cow position: chr29:17607460-17607327 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 180-337
Cow position: chr29:1124697-1124542 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 180-338
Cow position: chr29:39111269-39111429 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr29:4480131-4480287 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 180-339
Cow position: chr29:22162207-22162368 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-341
Cow position: chr29:12680198-12680041 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 182-339
Cow position: chr29:31594087-31594245 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 187-339
Cow position: chr29:22613465-22613311 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 187-339
Cow position: chr29:43009049-43009197 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 188-327
Cow position: chr29:24578897-24578755 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 188-334
Cow position: chr29:27329927-27329782 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 188-339
Cow position: chr29:34773703-34773849 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 188-341
Cow position: chr29:10058501-10058653 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 47

Conread position: 188-341
Cow position: chr29:10456528-10456676 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 191-339
Cow position: chr29:22714692-22714839 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 191-339
Cow position: chr29:23243847-23243995 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 43

Conread position: 191-339
Cow position: chr29:29314621-29314770 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 191-339
Cow position: chr29:36530898-36530752 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 71

Conread position: 213-339
Cow position: chr29:24103530-24103660 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 72

Conread position: 174-339
Cow position: chr3:55835794-55835962 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 174-339
Cow position: chr3:80564993-80564826 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 61

Conread position: 178-333
Cow position: chr3:23169043-23169197 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 27

Conread position: 178-339
Cow position: chr3:74409509-74409345 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 180-316
Cow position: chr3:26219031-26219166 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 180-334
Cow position: chr3:76922643-76922795 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 47

Conread position: 180-337
Cow position: chr3:55189734-55189891 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 149

Conread position: 180-338
Cow position: chr3:60264696-60264852 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 84

Conread position: 180-338
Cow position: chr3:80072149-80071990 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr3:12705523-12705683 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 180-339
Cow position: chr3:13507488-13507329 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 127

Conread position: 180-339
Cow position: chr3:54946151-54945991 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr3:55177726-55177888 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr3:70565718-70565875 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr3:78093369-78093521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 180-339
Cow position: chr3:81277678-81277836 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 181-334
Cow position: chr3:59799267-59799115 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 181-339
Cow position: chr3:56059830-56059669 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 188-304
Cow position: chr3:19626494-19626612 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 188-333
Cow position: chr3:75105071-75105218 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 188-337
Cow position: chr3:78077197-78077058 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 188-338
Cow position: chr3:49327956-49327805 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 188-338
Cow position: chr3:55272033-55272183 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 20

Conread position: 188-339
Cow position: chr3:10347366-10347218 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr3:13353376-13353224 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 188-339
Cow position: chr3:19585876-19585724 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 188-339
Cow position: chr3:23105350-23105503 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr3:27274543-27274394 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 82

Conread position: 188-339
Cow position: chr3:39969851-39970005 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 188-339
Cow position: chr3:44932528-44932375 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr3:70609644-70609489 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 121

Conread position: 188-339
Cow position: chr3:73237208-73237057 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 119

Conread position: 188-339
Cow position: chr3:75480015-75479865 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 12

Conread position: 188-341
Cow position: chr3:53222025-53221875 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 63

Conread position: 191-338
Cow position: chr3:3883806-3883955 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 191-339
Cow position: chr3:10958231-10958380 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 191-339
Cow position: chr3:53790527-53790674 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 44

Conread position: 191-339
Cow position: chr3:73443080-73443224 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 191-339
Cow position: chr3:74079627-74079776 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 192-339
Cow position: chr3:70899899-70899758 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 194-339
Cow position: chr3:70762114-70762260 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 64

Conread position: 204-339
Cow position: chr3:53150321-53150191 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 209-330
Cow position: chr3:26874587-26874464 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 209-339
Cow position: chr3:83815796-83815927 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 43

Conread position: 212-339
Cow position: chr3:25755012-25754889 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 212-341
Cow position: chr3:2396791-2396918 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 228-339
Cow position: chr3:34294310-34294422 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 176-339
Cow position: chr4:66112029-66112194 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 180-314
Cow position: chr4:48409232-48409366 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 37

Conread position: 180-327
Cow position: chr4:20139478-20139626 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 180-333
Cow position: chr4:63096037-63096189 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 100

Conread position: 180-334
Cow position: chr4:38157051-38157207 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 180-336
Cow position: chr4:3687959-3687805 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 180-337
Cow position: chr4:47730895-47730738 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 132

Conread position: 180-338
Cow position: chr4:37915299-37915458 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 23

Conread position: 180-339
Cow position: chr4:20299312-20299152 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 89

Conread position: 180-339
Cow position: chr4:21391775-21391934 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 37

Conread position: 180-339
Cow position: chr4:25537584-25537424 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr4:31136792-31136630 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 25

Conread position: 180-339
Cow position: chr4:38935396-38935235 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 180-339
Cow position: chr4:38952590-38952431 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr4:48486031-48485883 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 102

Conread position: 180-341
Cow position: chr4:10379147-10378985 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 180-341
Cow position: chr4:23847014-23847171 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 32

Conread position: 180-341
Cow position: chr4:51728116-51727953 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 181-339
Cow position: chr4:61897499-61897657 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 82

Conread position: 181-341
Cow position: chr4:16799150-16799311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 182-338
Cow position: chr4:22215616-22215772 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 99

Conread position: 182-339
Cow position: chr4:52831982-52832139 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 23

Conread position: 188-326
Cow position: chr4:11194215-11194076 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 17

Conread position: 188-334
Cow position: chr4:12903850-12903702 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 188-338
Cow position: chr4:42921828-42921971 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 188-339
Cow position: chr4:275492-275342 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 188-339
Cow position: chr4:11332126-11331971 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 188-339
Cow position: chr4:21874204-21874053 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 112

Conread position: 188-339
Cow position: chr4:54455313-54455464 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 191-334
Cow position: chr4:51899032-51898891 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 33

Conread position: 191-338
Cow position: chr4:17111847-17111997 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 192-334
Cow position: chr4:19463521-19463379 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 193-339
Cow position: chr4:36290648-36290507 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 211-339
Cow position: chr4:35982002-35981872 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 214-337
Cow position: chr4:1419227-1419103 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 176-316
Cow position: chr5:40109568-40109426 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 176-339
Cow position: chr5:6045371-6045203 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 177-339
Cow position: chr5:36038928-36039092 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 130

Conread position: 179-309
Cow position: chr5:56524245-56524111 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 179-314
Cow position: chr5:46509794-46509930 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 96

Conread position: 179-335
Cow position: chr5:56070930-56070772 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 179-339
Cow position: chr5:7698071-7697917 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 179-339
Cow position: chr5:34638955-34638796 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 180-294
Cow position: chr5:69099790-69099675 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 180-314
Cow position: chr5:23168756-23168892 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 180-315
Cow position: chr5:59626901-59627038 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr5:5111004-5111163 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr5:7044635-7044795 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr5:14314598-14314437 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 180-339
Cow position: chr5:15598165-15598321 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 107

Conread position: 180-339
Cow position: chr5:21617528-21617370 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 93

Conread position: 180-339
Cow position: chr5:30253811-30253653 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 180-339
Cow position: chr5:30629089-30629246 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr5:34562087-34561924 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 180-339
Cow position: chr5:35826672-35826515 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 99

Conread position: 180-339
Cow position: chr5:44446795-44446956 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 180-339
Cow position: chr5:50600117-50599968 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 180-339
Cow position: chr5:50821853-50821694 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 64

Conread position: 180-339
Cow position: chr5:57935038-57935197 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr5:62172482-62172328 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 180-339
Cow position: chr5:64321824-64321665 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 72

Conread position: 180-341
Cow position: chr5:21828938-21828776 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 188-334
Cow position: chr5:43402967-43402817 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 188-334
Cow position: chr5:55966818-55966962 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 188-339
Cow position: chr5:24996160-24996311 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 59

Conread position: 188-339
Cow position: chr5:26467688-26467535 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 188-339
Cow position: chr5:30302956-30302805 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 28

Conread position: 188-339
Cow position: chr5:31144725-31144876 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 99

Conread position: 188-339
Cow position: chr5:53835779-53835625 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 188-339
Cow position: chr5:60016230-60016079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 191-339
Cow position: chr5:57074272-57074422 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 102

Conread position: 212-339
Cow position: chr5:27015718-27015596 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 212-339
Cow position: chr5:60183841-60183713 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 213-339
Cow position: chr5:63865835-63865707 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 168-339
Cow position: chr6:18961420-18961590 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 178-338
Cow position: chr6:36493454-36493622 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 178-339
Cow position: chr6:23465947-23466103 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 179-325
Cow position: chr6:59603123-59603271 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 179-339
Cow position: chr6:1499728-1499566 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 63

Conread position: 179-339
Cow position: chr6:20097874-20098038 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 179-339
Cow position: chr6:31535484-31535641 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 138

Conread position: 180-308
Cow position: chr6:24962229-24962099 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 180-308
Cow position: chr6:28976956-28977087 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 71

Conread position: 180-309
Cow position: chr6:5609363-5609490 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 180-314
Cow position: chr6:7128319-7128456 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 180-327
Cow position: chr6:1944797-1944649 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 32

Conread position: 180-327
Cow position: chr6:23696084-23695932 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 180-327
Cow position: chr6:67615346-67615493 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 180-332
Cow position: chr6:15022463-15022615 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 21

Conread position: 180-332
Cow position: chr6:61608596-61608444 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 180-333
Cow position: chr6:65871121-65870962 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 180-334
Cow position: chr6:66375249-66375399 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 180-335
Cow position: chr6:11192380-11192537 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 180-337
Cow position: chr6:61524121-61524273 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 108

Conread position: 180-338
Cow position: chr6:25615011-25615177 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 180-339
Cow position: chr6:694067-694221 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 180-339
Cow position: chr6:4383563-4383412 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 180-339
Cow position: chr6:17414361-17414522 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 133

Conread position: 180-339
Cow position: chr6:19264415-19264570 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 180-339
Cow position: chr6:32121991-32121837 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 115

Conread position: 180-339
Cow position: chr6:32287723-32287564 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 23

Conread position: 180-339
Cow position: chr6:52478327-52478488 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr6:54990917-54991077 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 180-339
Cow position: chr6:58597422-58597578 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 109

Conread position: 180-339
Cow position: chr6:61269396-61269236 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 180-341
Cow position: chr6:63720284-63720119 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 142

Conread position: 181-339
Cow position: chr6:37332191-37332033 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 102

Conread position: 181-339
Cow position: chr6:47640349-47640507 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 182-339
Cow position: chr6:37376432-37376591 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 187-339
Cow position: chr6:26915408-26915256 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 74

Conread position: 188-326
Cow position: chr6:60468314-60468176 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 63

Conread position: 188-336
Cow position: chr6:29485158-29485019 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 188-339
Cow position: chr6:13687736-13687887 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 63

Conread position: 188-339
Cow position: chr6:15305647-15305507 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 188-339
Cow position: chr6:16423778-16423626 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 110

Conread position: 188-339
Cow position: chr6:21542399-21542246 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr6:48112272-48112125 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 188-339
Cow position: chr6:51581176-51581327 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 98

Conread position: 188-339
Cow position: chr6:60350216-60350369 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 188-341
Cow position: chr6:47520129-47519974 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 191-339
Cow position: chr6:46465894-46465749 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 212-327
Cow position: chr6:18117997-18118114 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 212-334
Cow position: chr6:8637330-8637206 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 174-339
Cow position: chr7:27079720-27079555 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 72

Conread position: 176-327
Cow position: chr7:35300327-35300479 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 62

Conread position: 177-339
Cow position: chr7:6042063-6041905 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 38

Conread position: 177-339
Cow position: chr7:36278388-36278224 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 121

Conread position: 180-326
Cow position: chr7:32894162-32894308 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-334
Cow position: chr7:31170862-31171018 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 180-335
Cow position: chr7:8658601-8658446 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 98

Conread position: 180-338
Cow position: chr7:28544263-28544105 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 180-338
Cow position: chr7:48714940-48714781 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 180-339
Cow position: chr7:8102507-8102350 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 180-339
Cow position: chr7:8272748-8272588 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 180-339
Cow position: chr7:11714340-11714498 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 180-339
Cow position: chr7:20534958-20534804 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 99

Conread position: 180-339
Cow position: chr7:23646697-23646535 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 75

Conread position: 180-339
Cow position: chr7:26631726-26631885 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 29

Conread position: 180-339
Cow position: chr7:39415996-39415837 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 122

Conread position: 180-339
Cow position: chr7:42593192-42593351 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chr7:42637057-42636909 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 180-339
Cow position: chr7:49751215-49751055 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 181-339
Cow position: chr7:60483340-60483498 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 187-314
Cow position: chr7:20168629-20168501 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 188-297
Cow position: chr7:33393387-33393276 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 188-314
Cow position: chr7:11958358-11958482 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 188-314
Cow position: chr7:56886431-56886556 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 188-335
Cow position: chr7:5199470-5199618 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 188-335
Cow position: chr7:18288189-18288335 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 15

Conread position: 188-338
Cow position: chr7:3773188-3773339 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 22

Conread position: 188-339
Cow position: chr7:10227-10073 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 28

Conread position: 188-339
Cow position: chr7:14353710-14353861 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chr7:28917169-28917016 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 84

Conread position: 188-339
Cow position: chr7:32915193-32915038 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 69

Conread position: 188-339
Cow position: chr7:35274999-35275152 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 188-339
Cow position: chr7:37361958-37361809 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 188-339
Cow position: chr7:50066038-50066184 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 94

Conread position: 188-339
Cow position: chr7:53053325-53053473 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 131

Conread position: 188-339
Cow position: chr7:60732557-60732711 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 188-341
Cow position: chr7:28584325-28584173 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 190-309
Cow position: chr7:47698089-47697968 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 191-339
Cow position: chr7:23456746-23456895 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 191-341
Cow position: chr7:49106126-49106275 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 12

Conread position: 194-339
Cow position: chr7:32819891-32819744 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 212-339
Cow position: chr7:23679537-23679663 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 34

Conread position: 215-339
Cow position: chr7:51319852-51319727 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 174-339
Cow position: chr8:25349774-25349609 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 78

Conread position: 176-334
Cow position: chr8:10456527-10456367 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 178-334
Cow position: chr8:55871642-55871800 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 179-339
Cow position: chr8:16031523-16031677 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 180-312
Cow position: chr8:55897759-55897890 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 180-319
Cow position: chr8:12814940-12814801 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 180-334
Cow position: chr8:39174188-39174344 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr8:3015536-3015370 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 180-339
Cow position: chr8:6484876-6485036 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 180-339
Cow position: chr8:8190009-8190169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 180-339
Cow position: chr8:24867687-24867845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 130

Conread position: 180-339
Cow position: chr8:29030031-29030202 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 180-339
Cow position: chr8:32620928-32621095 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 180-339
Cow position: chr8:33406792-33406947 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 121

Conread position: 180-339
Cow position: chr8:33640420-33640259 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chr8:39807654-39807491 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 124

Conread position: 180-339
Cow position: chr8:52925666-52925820 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 181-339
Cow position: chr8:42762377-42762534 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 73

Conread position: 187-339
Cow position: chr8:5979991-5979838 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 84

Conread position: 188-309
Cow position: chr8:16653462-16653341 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 188-315
Cow position: chr8:55716802-55716673 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 188-327
Cow position: chr8:29262828-29262684 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 188-337
Cow position: chr8:24371667-24371818 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 188-339
Cow position: chr8:554138-554289 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 12

Conread position: 188-339
Cow position: chr8:6224387-6224538 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 139

Conread position: 188-339
Cow position: chr8:10970881-10970728 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 120

Conread position: 188-339
Cow position: chr8:14383144-14383292 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 188-339
Cow position: chr8:19284547-19284398 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 15

Conread position: 188-339
Cow position: chr8:31985310-31985162 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 122

Conread position: 188-339
Cow position: chr8:32093923-32093775 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 188-339
Cow position: chr8:39630822-39630671 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 99

Conread position: 188-339
Cow position: chr8:58876116-58875960 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 190-329
Cow position: chr8:55926245-55926105 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 29

Conread position: 191-327
Cow position: chr8:45447052-45447193 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 192-334
Cow position: chr8:6073773-6073916 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 35

Conread position: 192-338
Cow position: chr8:2814667-2814520 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 196-339
Cow position: chr8:4924607-4924465 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 204-339
Cow position: chr8:6675178-6675044 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 213-339
Cow position: chr8:46616432-46616310 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 227-339
Cow position: chr8:34478128-34478016 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 174-339
Cow position: chr9:5263477-5263643 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 152

Conread position: 179-306
Cow position: chr9:28754801-28754929 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 179-333
Cow position: chr9:41486259-41486104 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 179-339
Cow position: chr9:19555357-19555516 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 96

Conread position: 179-341
Cow position: chr9:31079098-31078938 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 180-290
Cow position: chr9:17840693-17840581 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 180-314
Cow position: chr9:6596251-6596117 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-338
Cow position: chr9:7634256-7634415 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 180-338
Cow position: chr9:34286784-34286944 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 180-339
Cow position: chr9:12910416-12910259 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chr9:13169678-13169521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 180-339
Cow position: chr9:20847914-20848074 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chr9:26344983-26344826 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 180-339
Cow position: chr9:33119903-33119743 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 180-339
Cow position: chr9:41728243-41728400 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 96

Conread position: 180-339
Cow position: chr9:45285550-45285387 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 134

Conread position: 180-339
Cow position: chr9:61302985-61303146 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 180-341
Cow position: chr9:5219187-5219024 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 180-341
Cow position: chr9:48628013-48628172 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 89

Conread position: 181-339
Cow position: chr9:29006543-29006705 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 181-339
Cow position: chr9:34958070-34957912 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 123

Conread position: 183-339
Cow position: chr9:55256564-55256408 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 74

Conread position: 188-314
Cow position: chr9:33584692-33584565 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 47

Conread position: 188-316
Cow position: chr9:18380855-18380982 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 188-333
Cow position: chr9:43875724-43875577 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 188-338
Cow position: chr9:44832062-44831913 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 13

Conread position: 188-339
Cow position: chr9:5763638-5763491 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 188-339
Cow position: chr9:9654317-9654169 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 9

Conread position: 188-339
Cow position: chr9:49293150-49293003 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 191-337
Cow position: chr9:59013346-59013193 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 114

Conread position: 191-339
Cow position: chr9:9403178-9403033 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 16

Conread position: 194-339
Cow position: chr9:43757540-43757680 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 212-339
Cow position: chr9:11299673-11299548 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 212-339
Cow position: chr9:42509133-42509257 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 228-341
Cow position: chr9:60037683-60037798 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 179-312
Cow position: chrX:46429747-46429881 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 121

Conread position: 179-333
Cow position: chrX:36068087-36067932 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 180-314
Cow position: chrX:618931-619066 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 180-314
Cow position: chrX:17726046-17725912 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 180-314
Cow position: chrX:22115246-22115378 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 180-334
Cow position: chrX:34314095-34313947 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 42

Conread position: 180-339
Cow position: chrX:616188-616349 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 71

Conread position: 180-339
Cow position: chrX:1466233-1466074 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 180-339
Cow position: chrX:7571976-7571816 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 180-339
Cow position: chrX:14883885-14884045 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chrX:34411917-34411755 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 180-339
Cow position: chrX:34532591-34532434 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 180-339
Cow position: chrX:37781038-37781198 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 180-339
Cow position: chrX:40557608-40557768 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 181-301
Cow position: chrX:22392914-22393035 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 181-333
Cow position: chrX:9252093-9252243 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 181-335
Cow position: chrX:40685258-40685414 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 187-309
Cow position: chrX:5919556-5919433 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 188-333
Cow position: chrX:13785297-13785444 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 188-333
Cow position: chrX:18272992-18273139 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 188-337
Cow position: chrX:42171231-42171381 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 188-339
Cow position: chrX:7509206-7509055 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 188-339
Cow position: chrX:26881502-26881655 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 188-339
Cow position: chrX:40269554-40269401 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 190-336
Cow position: chrX:45414243-45414384 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 195-339
Cow position: chrX:6414103-6413961 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 196-339
Cow position: chrX:34991091-34990948 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 104

Conread position: 212-314
Cow position: chrX:5677852-5677954 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 212-334
Cow position: chrX:45976965-45976840 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 212-339
Cow position: chrX:5118463-5118589 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 212-339
Cow position: chrX:29050289-29050160 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 214-339
Cow position: chrX:918688-918814 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 229-339
Cow position: chrX:4750281-4750391 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0