Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-421
Cow position: chr1:78557967-78558404 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-440
Cow position: chr1:19517896-19517438 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 344

Conread position: 1-462
Cow position: chr1:81362817-81363282 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 50

Conread position: 1-463
Cow position: chr1:71081308-71080838 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 166

Conread position: 1-481
Cow position: chr1:24580940-24581415 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 19

Conread position: 1-547
Cow position: chr1:100421127-100421684 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 1-552
Cow position: chr1:20846473-20845904 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 332

Conread position: 1-553
Cow position: chr1:68145431-68144862 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-554
Cow position: chr1:42054040-42053475 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 25

Conread position: 1-555
Cow position: chr1:71691093-71691664 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-558
Cow position: chr1:101008321-101007767 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 216

Conread position: 1-563
Cow position: chr1:56718603-56719174 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 162

Conread position: 1-563
Cow position: chr1:90393217-90392638 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 329

Conread position: 1-565
Cow position: chr1:17009192-17008619 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 164

Conread position: 1-565
Cow position: chr1:77748283-77748859 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 116

Conread position: 1-565
Cow position: chr1:83136475-83137055 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 165

Conread position: 1-566
Cow position: chr1:9376839-9376259 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 330

Conread position: 1-572
Cow position: chr1:89742723-89742141 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 191

Conread position: 1-574
Cow position: chr1:13251005-13250418 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 64

Conread position: 1-574
Cow position: chr1:51980511-51981096 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 166

Conread position: 2-547
Cow position: chr1:29915707-29916252 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 100

Conread position: 2-563
Cow position: chr1:90297456-90298021 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 90

Conread position: 3-465
Cow position: chr1:66242523-66242049 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 79

Conread position: 3-552
Cow position: chr1:57391068-57390507 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 50

Conread position: 3-552
Cow position: chr1:99628541-99627968 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 182

Conread position: 3-558
Cow position: chr1:72986997-72987562 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 331

Conread position: 3-573
Cow position: chr1:40061752-40062316 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 25

Conread position: 3-574
Cow position: chr1:8470621-8470033 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 329

Conread position: 5-469
Cow position: chr1:1744023-1743531 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 327
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 97

Conread position: 10-574
Cow position: chr1:33716509-33717090 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 197

Conread position: 20-552
Cow position: chr1:84284262-84284811 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 312

Conread position: 20-562
Cow position: chr1:21092396-21092950 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 15

Conread position: 20-574
Cow position: chr1:53208411-53207828 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 12

Conread position: 27-552
Cow position: chr1:92433331-92433865 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 183

Conread position: 32-565
Cow position: chr1:55137931-55137371 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 303

Conread position: 38-552
Cow position: chr1:75444108-75443570 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 366

Conread position: 43-484
Cow position: chr1:56620213-56619755 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 289

Conread position: 46-488
Cow position: chr1:99792125-99792571 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 63-455
Cow position: chr1:75743871-75744277 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 69-513
Cow position: chr1:37646912-37646464 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 69-543
Cow position: chr1:52564432-52563954 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 271

Conread position: 80-464
Cow position: chr1:23886675-23886274 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 252

Conread position: 80-552
Cow position: chr1:94227187-94226701 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 119

Conread position: 96-552
Cow position: chr1:31498995-31499474 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 87

Conread position: 99-574
Cow position: chr1:53397365-53397856 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 231

Conread position: 111-552
Cow position: chr1:831592-831134 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 221

Conread position: 131-532
Cow position: chr1:55429564-55429157 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 31

Conread position: 131-554
Cow position: chr1:82378206-82378643 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 196

Conread position: 138-554
Cow position: chr1:89349400-89349826 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 117

Conread position: 141-574
Cow position: chr1:71676462-71676028 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 43

Conread position: 144-563
Cow position: chr1:99642900-99642510 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 46

Conread position: 151-552
Cow position: chr1:37310081-37309664 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 192

Conread position: 152-552
Cow position: chr1:43380567-43380181 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 154-468
Cow position: chr1:5178424-5178099 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 15, 46

Conread position: 154-574
Cow position: chr1:54199940-54199519 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 174

Conread position: 155-443
Cow position: chr1:61747719-61747422 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 169

Conread position: 155-480
Cow position: chr1:83594336-83594001 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 169

Conread position: 159-566
Cow position: chr1:54639730-54640147 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 166

Conread position: 164-552
Cow position: chr1:22637942-22637549 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 157

Conread position: 168-562
Cow position: chr1:79002502-79002101 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 173-552
Cow position: chr1:20385168-20384774 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 152

Conread position: 181-547
Cow position: chr1:3739466-3739839 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 147

Conread position: 203-484
Cow position: chr1:65021290-65021581 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 203-547
Cow position: chr1:3963112-3963460 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 203-552
Cow position: chr1:1981619-1981263 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 203-573
Cow position: chr1:74821941-74822319 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 7

Conread position: 210-558
Cow position: chr1:84812454-84812084 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 113

Conread position: 214-550
Cow position: chr1:84240407-84240744 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 214-552
Cow position: chr1:8402233-8402579 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 214-558
Cow position: chr1:29671997-29671671 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 109

Conread position: 214-574
Cow position: chr1:95176436-95176804 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 215-569
Cow position: chr1:68818310-68817936 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 42, 112

Conread position: 217-574
Cow position: chr1:44083570-44083939 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 100

Conread position: 218-543
Cow position: chr1:4589975-4589645 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 107

Conread position: 235-552
Cow position: chr1:52496314-52496628 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 78

Conread position: 248-552
Cow position: chr1:36613725-36613428 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 256-541
Cow position: chr1:100816100-100816377 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 260-442
Cow position: chr1:10064500-10064318 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 70

Conread position: 260-451
Cow position: chr1:22835937-22836122 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 260-465
Cow position: chr1:32355254-32355056 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 260-518
Cow position: chr1:3556944-3556697 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr1:57957296-57957011 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 49

Conread position: 260-552
Cow position: chr1:95637103-95637393 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 53

Conread position: 260-555
Cow position: chr1:4441542-4441256 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 260-555
Cow position: chr1:101822935-101822648 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 260-560
Cow position: chr1:73584861-73584548 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 123, 53

Conread position: 260-565
Cow position: chr1:10119776-10120075 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position: chr1:874200-874511 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 260-574
Cow position: chr1:89937798-89937491 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 53

Conread position: 261-552
Cow position: chr1:56228814-56229101 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 50

Conread position: 261-574
Cow position: chr1:61350718-61351016 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 264-437
Cow position: chr1:57264986-57264820 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 264-573
Cow position: chr1:101551015-101551325 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 264-574
Cow position: chr1:11226679-11226377 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 264-574
Cow position: chr1:88970644-88970928 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 94, 49

Conread position: 264-574
Cow position: chr1:97075672-97075368 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 47

Conread position: 266-558
Cow position: chr1:55260863-55260578 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 42

Conread position: 1-455
Cow position: chr10:23935300-23935766 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 31

Conread position: 1-531
Cow position: chr10:47772986-47773529 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 165

Conread position: 1-539
Cow position: chr10:46195046-46195595 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 234

Conread position: 1-547
Cow position: chr10:9798953-9798382 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 154

Conread position: 1-547
Cow position: chr10:34673156-34673710 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 206

Conread position: 1-552
Cow position: chr10:24222922-24222356 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 332

Conread position: 1-558
Cow position: chr10:51558965-51559539 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 333

Conread position: 1-565
Cow position: chr10:23877375-23876794 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-565
Cow position: chr10:33933759-33933180 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-573
Cow position: chr10:6253244-6252647 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 70

Conread position: 1-574
Cow position: chr10:32282579-32283170 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 334

Conread position: 1-574
Cow position: chr10:52277979-52278565 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 116

Conread position: 2-468
Cow position: chr10:50038580-50039060 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 115

Conread position: 2-547
Cow position: chr10:9287318-9287878 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 226

Conread position: 2-559
Cow position: chr10:29815833-29816412 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 339

Conread position: 2-563
Cow position: chr10:15867503-15868062 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 87

Conread position: 3-468
Cow position: chr10:24743531-24744012 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 332

Conread position: 3-565
Cow position: chr10:33665093-33665669 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 333

Conread position: 3-572
Cow position: chr10:38724922-38725498 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 50

Conread position: 3-574
Cow position: chr10:25341841-25342430 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 224

Conread position: 4-552
Cow position: chr10:50110642-50110088 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 4-565
Cow position: chr10:42347169-42346596 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 242

Conread position: 5-558
Cow position: chr10:63955061-63955619 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 192

Conread position: 28-552
Cow position: chr10:58599348-58598808 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 34-463
Cow position: chr10:30106780-30106340 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 8

Conread position: 35-539
Cow position: chr10:24308610-24308099 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 297

Conread position: 37-574
Cow position: chr10:10573138-10573691 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 131

Conread position: 41-574
Cow position: chr10:10047976-10048519 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 42-558
Cow position: chr10:30745693-30746223 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 42-562
Cow position: chr10:12393282-12392775 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 39

Conread position: 45-554
Cow position: chr10:58607399-58607924 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 126

Conread position: 48-558
Cow position: chr10:33215110-33215619 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 52-465
Cow position: chr10:24751694-24752120 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 53-552
Cow position: chr10:23328693-23328181 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 282

Conread position: 60-572
Cow position: chr10:46801690-46801168 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 112

Conread position: 66-552
Cow position: chr10:10134297-10134794 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 110

Conread position: 66-574
Cow position: chr10:6489198-6489704 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 260

Conread position: 91-552
Cow position: chr10:48270436-48269958 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 241

Conread position: 131-436
Cow position: chr10:55011458-55011776 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 85, 206

Conread position: 131-555
Cow position: chr10:58066750-58066315 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 131-573
Cow position: chr10:30359916-30360367 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 112

Conread position: 133-438
Cow position: chr10:34299874-34300184 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 83, 112

Conread position: 137-490
Cow position: chr10:9580058-9579699 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 52

Conread position: 138-435
Cow position: chr10:32833720-32834040 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 138-437
Cow position: chr10:53357029-53357334 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 78, 16

Conread position: 138-563
Cow position: chr10:50608947-50609365 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 146-572
Cow position: chr10:62285950-62286387 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 149-554
Cow position: chr10:37311733-37311319 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 183

Conread position: 151-574
Cow position: chr10:25224-25667 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 177

Conread position: 158-451
Cow position: chr10:30370783-30370483 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 70

Conread position: 160-455
Cow position: chr10:55098306-55097992 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 182

Conread position: 162-498
Cow position: chr10:24755851-24756202 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 92

Conread position: 185-574
Cow position: chr10:13050849-13050455 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 143

Conread position: 189-558
Cow position: chr10:44680963-44681340 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 138

Conread position: 199-552
Cow position: chr10:39386910-39387276 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 229

Conread position: 203-524
Cow position: chr10:22429501-22429173 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 196
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 59, 120

Conread position: 210-552
Cow position: chr10:48462874-48462522 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 123

Conread position: 214-468
Cow position: chr10:60355561-60355802 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 214-535
Cow position: chr10:29339924-29339598 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 35, 230

Conread position: 214-555
Cow position: chr10:53336931-53336584 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 110

Conread position: 214-571
Cow position: chr10:6529672-6530038 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 111

Conread position: 214-574
Cow position: chr10:13311199-13311570 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 126

Conread position: 214-574
Cow position: chr10:56094706-56095066 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 38

Conread position: 221-552
Cow position: chr10:29322361-29322697 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 105

Conread position: 225-558
Cow position: chr10:11247460-11247795 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 100

Conread position: 259-544
Cow position: chr10:14189271-14189004 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 259-574
Cow position: chr10:32928292-32928605 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 197

Conread position: 260-465
Cow position: chr10:45476458-45476656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 260-466
Cow position: chr10:46150105-46150306 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 49

Conread position: 260-550
Cow position: chr10:46172438-46172160 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 51

Conread position: 260-552
Cow position: chr10:65345928-65345635 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 260-554
Cow position: chr10:26577080-26577368 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 260-563
Cow position: chr10:5113118-5113413 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 53

Conread position: 260-565
Cow position: chr10:22567906-22567611 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-565
Cow position: chr10:35828920-35828621 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-565
Cow position: chr10:49935269-49935581 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 165, 49

Conread position: 260-574
Cow position: chr10:22509652-22509346 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 255, 48

Conread position: 260-574
Cow position: chr10:24744651-24744965 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 53

Conread position: 261-563
Cow position: chr10:50067990-50067694 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 261-572
Cow position: chr10:9082844-9083135 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 261-574
Cow position: chr10:19104650-19104338 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 48

Conread position: 264-445
Cow position: chr10:19093751-19093930 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 264-542
Cow position: chr10:24972061-24971793 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 55

Conread position: 264-560
Cow position: chr10:8403726-8404033 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 0

Conread position: 264-574
Cow position: chr10:28569598-28569905 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 44

Conread position: 268-524
Cow position: chr10:24292787-24292531 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 142

Conread position: 297-554
Cow position: chr10:24547820-24548076 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 1-430
Cow position: chr11:14469704-14470150 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 205

Conread position: 1-465
Cow position: chr11:56916520-56916022 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 1-484
Cow position: chr11:61431534-61431034 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-484
Cow position: chr11:67920139-67919640 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-550
Cow position: chr11:42358383-42358944 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 220

Conread position: 1-552
Cow position: chr11:38819295-38818727 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-573
Cow position: chr11:2309129-2309713 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 485

Conread position: 1-574
Cow position: chr11:5273371-5272783 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 332

Conread position: 1-574
Cow position: chr11:84774366-84774954 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 218

Conread position: 2-307
Cow position: chr11:20601515-20601841 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 3-511
Cow position: chr11:44915481-44914955 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 164

Conread position: 4-475
Cow position: chr11:62238743-62239231 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 40

Conread position: 4-572
Cow position: chr11:56752121-56751546 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 81

Conread position: 10-571
Cow position: chr11:30164774-30165347 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 98

Conread position: 29-565
Cow position: chr11:42292551-42292002 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 186

Conread position: 34-552
Cow position: chr11:86721242-86720717 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 39-563
Cow position: chr11:12762957-12762417 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 118

Conread position: 40-574
Cow position: chr11:48271506-48272038 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 47-572
Cow position: chr11:6153718-6154253 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 77

Conread position: 60-451
Cow position: chr11:72291055-72291457 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 268

Conread position: 64-455
Cow position: chr11:84532015-84531609 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 77, 152

Conread position: 71-547
Cow position: chr11:19787473-19787962 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 263

Conread position: 76-574
Cow position: chr11:75480709-75480183 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 263

Conread position: 82-554
Cow position: chr11:4383964-4384448 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 253

Conread position: 86-552
Cow position: chr11:43537202-43536719 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 246

Conread position: 87-552
Cow position: chr11:40819273-40818817 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 129-411
Cow position: chr11:84723719-84724016 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 195

Conread position: 131-490
Cow position: chr11:26118659-26118303 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 184

Conread position: 131-552
Cow position: chr11:39078721-39078289 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 195

Conread position: 131-563
Cow position: chr11:35579647-35580087 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 101

Conread position: 131-574
Cow position: chr11:7589587-7590034 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 113

Conread position: 133-574
Cow position: chr11:36986358-36986805 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 197

Conread position: 139-513
Cow position: chr11:18509610-18509226 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 188

Conread position: 141-444
Cow position: chr11:70639169-70639474 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 114, 59

Conread position: 141-570
Cow position: chr11:62377025-62376598 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 146-558
Cow position: chr11:43509978-43509556 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 181

Conread position: 151-552
Cow position: chr11:68571261-68570851 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 176

Conread position: 154-460
Cow position: chr11:75354741-75355056 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 170

Conread position: 155-512
Cow position: chr11:21832552-21832185 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 171

Conread position: 155-552
Cow position: chr11:14287149-14287556 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 170

Conread position: 155-552
Cow position: chr11:14297142-14297549 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 170

Conread position: 156-563
Cow position: chr11:63157487-63157080 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 283
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 106, 48

Conread position: 157-574
Cow position: chr11:15286204-15285774 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 162-441
Cow position: chr11:10149983-10149695 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 27

Conread position: 167-565
Cow position: chr11:21499043-21499452 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 46

Conread position: 178-574
Cow position: chr11:55116910-55117316 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 183-552
Cow position: chr11:54134806-54134426 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 185-574
Cow position: chr11:74316145-74316553 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 127

Conread position: 187-552
Cow position: chr11:62151432-62151060 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 67

Conread position: 187-552
Cow position: chr11:76114100-76114477 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 189-555
Cow position: chr11:40467673-40467299 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 138

Conread position: 195-552
Cow position: chr11:41164226-41163859 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 130

Conread position: 210-552
Cow position: chr11:30707969-30708324 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 117

Conread position: 214-453
Cow position: chr11:55761263-55761512 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 125

Conread position: 214-544
Cow position: chr11:19890360-19890695 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 214-574
Cow position: chr11:8841273-8840897 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 215-552
Cow position: chr11:63469364-63469704 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 215-562
Cow position: chr11:64334333-64334688 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 216-450
Cow position: chr11:15999867-16000116 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 133

Conread position: 216-552
Cow position: chr11:8827261-8827601 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 111

Conread position: 255-472
Cow position: chr11:13067986-13067777 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 56

Conread position: 255-472
Cow position: chr11:13162011-13162220 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 56

Conread position: 260-455
Cow position: chr11:17514629-17514819 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 184, 51

Conread position: 260-521
Cow position: chr11:34112791-34113065 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 260-544
Cow position: chr11:27248031-27248305 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr11:57253809-57254095 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 260-558
Cow position: chr11:58587872-58588172 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 260-573
Cow position: chr11:16251720-16251407 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 260-574
Cow position: chr11:7925056-7924746 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 260-574
Cow position: chr11:59902434-59902731 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr11:62979013-62979321 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-552
Cow position: chr11:17969039-17968754 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 263-465
Cow position: chr11:25565484-25565680 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 264-444
Cow position: chr11:25164943-25165117 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 264-543
Cow position: chr11:63909887-63910161 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 52

Conread position: 264-554
Cow position: chr11:7683368-7683653 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 62

Conread position: 264-574
Cow position: chr11:6644763-6645063 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 264-574
Cow position: chr11:52516151-52516455 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 265-552
Cow position: chr11:15560220-15559939 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 277-500
Cow position: chr11:2093636-2093417 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 154, 0

Conread position: 460-574
Cow position: chr11:24937392-24937505 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-466
Cow position: chr12:28708138-28707659 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 41

Conread position: 1-563
Cow position: chr12:5800266-5800847 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 331

Conread position: 1-565
Cow position: chr12:1405933-1406519 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-565
Cow position: chr12:21250828-21250248 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 205

Conread position: 1-574
Cow position: chr12:6404301-6403707 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 331

Conread position: 2-565
Cow position: chr12:19868717-19869286 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 70

Conread position: 2-574
Cow position: chr12:35367867-35368466 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 39

Conread position: 3-542
Cow position: chr12:7885385-7884869 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 171

Conread position: 3-574
Cow position: chr12:19040379-19039791 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 11

Conread position: 15-574
Cow position: chr12:21075320-21075887 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 40

Conread position: 31-552
Cow position: chr12:4593359-4593899 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 137

Conread position: 64-554
Cow position: chr12:36568752-36568253 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 72-572
Cow position: chr12:37770187-37770697 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 65

Conread position: 85-552
Cow position: chr12:19865565-19866044 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 154

Conread position: 96-555
Cow position: chr12:37514891-37514425 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 227

Conread position: 131-539
Cow position: chr12:3038889-3039303 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 131-552
Cow position: chr12:43470589-43471020 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 132-558
Cow position: chr12:12754253-12753818 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 193

Conread position: 137-552
Cow position: chr12:24755646-24755223 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 189

Conread position: 140-552
Cow position: chr12:37122893-37123314 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 188

Conread position: 159-574
Cow position: chr12:18421526-18421103 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 76

Conread position: 165-539
Cow position: chr12:31430160-31429772 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 165-554
Cow position: chr12:7398435-7398842 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 160

Conread position: 165-574
Cow position: chr12:18553665-18554093 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 162

Conread position: 169-574
Cow position: chr12:27176245-27175846 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 170-542
Cow position: chr12:2253103-2253485 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 155

Conread position: 177-555
Cow position: chr12:36118389-36118775 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 150

Conread position: 189-558
Cow position: chr12:39356743-39357126 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 141

Conread position: 190-552
Cow position: chr12:46332808-46333162 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 14

Conread position: 192-550
Cow position: chr12:17472783-17472420 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 205-555
Cow position: chr12:38111178-38111534 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 119

Conread position: 208-552
Cow position: chr12:31228042-31228376 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 127, 117

Conread position: 214-552
Cow position: chr12:2228715-2228369 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 214-565
Cow position: chr12:2821316-2821675 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 217-562
Cow position: chr12:29066943-29067282 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 25

Conread position: 218-439
Cow position: chr12:31947655-31947890 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 108

Conread position: 260-453
Cow position: chr12:28650431-28650624 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 260-503
Cow position: chr12:5658582-5658344 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 92, 51

Conread position: 260-561
Cow position: chr12:19691722-19691425 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 58

Conread position: 260-574
Cow position: chr12:27563867-27563563 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 261-451
Cow position: chr12:5713965-5714148 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 261-552
Cow position: chr12:35311157-35310871 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 261-572
Cow position: chr12:40806913-40807218 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 261-574
Cow position: chr12:38678209-38678522 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 51

Conread position: 264-468
Cow position: chr12:40163061-40163264 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 49

Conread position: 264-538
Cow position: chr12:7977572-7977835 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 48

Conread position: 264-555
Cow position: chr12:42602716-42602435 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 265-552
Cow position: chr12:2711009-2711294 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 46

Conread position: 266-558
Cow position: chr12:8673390-8673102 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 45

Conread position: 275-547
Cow position: chr12:17716604-17716880 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 278-552
Cow position: chr12:33112062-33112330 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 281-465
Cow position: chr12:12178082-12178263 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 150, 0

Conread position: 281-542
Cow position: chr12:30918967-30919224 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 130

Conread position: 296-563
Cow position: chr12:21828631-21828897 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 158

Conread position: 1-438
Cow position: chr13:3419638-3419207 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 168, 159

Conread position: 1-438
Cow position: chr13:58742432-58742875 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 75

Conread position: 1-465
Cow position: chr13:14302709-14302228 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 333

Conread position: 1-530
Cow position: chr13:12618394-12618919 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 62

Conread position: 1-554
Cow position: chr13:186214-185651 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 81

Conread position: 1-554
Cow position: chr13:19426000-19426555 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 1-558
Cow position: chr13:51902328-51901751 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 165

Conread position: 1-560
Cow position: chr13:1155001-1155571 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 1-565
Cow position: chr13:33522678-33522102 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-574
Cow position: chr13:32754528-32755112 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 333

Conread position: 2-552
Cow position: chr13:26098853-26098290 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 40

Conread position: 2-574
Cow position: chr13:46182483-46181911 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 199

Conread position: 3-519
Cow position: chr13:31638507-31638004 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 115

Conread position: 3-539
Cow position: chr13:21107847-21107287 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 173

Conread position: 3-552
Cow position: chr13:22085049-22085606 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 247

Conread position: 3-555
Cow position: chr13:1012039-1011474 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 176

Conread position: 4-549
Cow position: chr13:21402085-21402647 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 163

Conread position: 4-554
Cow position: chr13:16015533-16014950 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 340

Conread position: 20-552
Cow position: chr13:14551834-14551285 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 312

Conread position: 23-552
Cow position: chr13:11486336-11486882 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 309

Conread position: 45-555
Cow position: chr13:971222-971756 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 302

Conread position: 49-552
Cow position: chr13:52009926-52010440 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 53-491
Cow position: chr13:4420972-4420516 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 284

Conread position: 62-574
Cow position: chr13:15873105-15872572 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 18

Conread position: 65-574
Cow position: chr13:60690069-60690599 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 69-562
Cow position: chr13:21235045-21235550 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 266

Conread position: 71-451
Cow position: chr13:9734593-9734191 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 285

Conread position: 93-447
Cow position: chr13:22117214-22116853 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 29

Conread position: 131-424
Cow position: chr13:45072849-45073148 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 100, 56

Conread position: 131-447
Cow position: chr13:24156446-24156119 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 200

Conread position: 131-572
Cow position: chr13:55371585-55372036 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 131-574
Cow position: chr13:32825837-32826284 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 87

Conread position: 148-565
Cow position: chr13:33876212-33875794 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 12

Conread position: 151-574
Cow position: chr13:13261569-13261131 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 172

Conread position: 154-539
Cow position: chr13:20440047-20440442 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 176

Conread position: 154-574
Cow position: chr13:37483709-37484147 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 59

Conread position: 160-456
Cow position: chr13:48164931-48165236 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 167

Conread position: 164-574
Cow position: chr13:52585481-52585897 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 170-542
Cow position: chr13:24109620-24109237 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 256
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 157

Conread position: 182-565
Cow position: chr13:52922626-52922222 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 142

Conread position: 188-552
Cow position: chr13:41254145-41253764 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 137

Conread position: 189-444
Cow position: chr13:53070023-53069752 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 5

Conread position: 198-574
Cow position: chr13:311941-311557 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 123

Conread position: 212-552
Cow position: chr13:21255859-21256208 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 124

Conread position: 223-574
Cow position: chr13:40943725-40943371 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 99

Conread position: 224-555
Cow position: chr13:51527966-51528305 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 231-444
Cow position: chr13:17970537-17970748 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 249-451
Cow position: chr13:11821756-11821562 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 259-471
Cow position: chr13:5261918-5262122 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 52

Conread position: 259-565
Cow position: chr13:20863590-20863886 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 44, 61

Conread position: 260-411
Cow position: chr13:33816299-33816155 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 0

Conread position: 260-442
Cow position: chr13:48038557-48038381 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 260-443
Cow position: chr13:24099556-24099733 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 260-444
Cow position: chr13:57444622-57444802 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 260-462
Cow position: chr13:16025165-16024963 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 48

Conread position: 260-465
Cow position: chr13:5278542-5278741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 260-484
Cow position: chr13:5621835-5621617 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 260-523
Cow position: chr13:26822570-26822303 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 260-547
Cow position: chr13:36770991-36771274 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 51

Conread position: 260-552
Cow position: chr13:5175998-5175715 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 260-553
Cow position: chr13:62517770-62518063 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 94, 54

Conread position: 260-554
Cow position: chr13:20377911-20378195 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 51

Conread position: 260-562
Cow position: chr13:16092235-16091941 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-565
Cow position: chr13:3701862-3701567 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 260-572
Cow position: chr13:25062849-25062535 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 260-574
Cow position: chr13:12682110-12682418 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 46

Conread position: 260-574
Cow position: chr13:15446473-15446172 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 264-455
Cow position: chr13:14063071-14063256 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 264-539
Cow position: chr13:7663006-7663271 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 265-552
Cow position: chr13:57898628-57898913 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 161, 0

Conread position: 266-574
Cow position: chr13:35761144-35761441 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 268-574
Cow position: chr13:61170302-61170592 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 269-572
Cow position: chr13:50689970-50690267 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 290-560
Cow position: chr13:60436471-60436746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-500
Cow position: chr14:19654199-19654705 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 46

Conread position: 1-543
Cow position: chr14:25886270-25885711 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 1-544
Cow position: chr14:33834861-33834305 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 1-547
Cow position: chr14:12243626-12244174 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 28

Conread position: 1-555
Cow position: chr14:44382426-44382999 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 336

Conread position: 1-563
Cow position: chr14:9020794-9020219 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 94

Conread position: 1-569
Cow position: chr14:12483546-12484115 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 327

Conread position: 1-572
Cow position: chr14:46489490-46490072 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 210

Conread position: 1-574
Cow position: chr14:18811361-18811938 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 60

Conread position: 1-574
Cow position: chr14:34675246-34675835 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-574
Cow position: chr14:35420008-35420577 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 90

Conread position: 2-422
Cow position: chr14:37677524-37677945 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 50

Conread position: 2-574
Cow position: chr14:13582014-13582577 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 133

Conread position: 2-574
Cow position: chr14:18940548-18941119 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 243

Conread position: 3-451
Cow position: chr14:46331470-46331010 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 28

Conread position: 3-563
Cow position: chr14:12545831-12546395 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 192

Conread position: 3-573
Cow position: chr14:16525638-16525060 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 86

Conread position: 4-444
Cow position: chr14:33791971-33791523 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 217

Conread position: 4-565
Cow position: chr14:48572203-48571625 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 327

Conread position: 4-574
Cow position: chr14:7647275-7647858 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 167

Conread position: 30-555
Cow position: chr14:46736058-46735512 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 304

Conread position: 36-558
Cow position: chr14:13722867-13723402 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 188

Conread position: 37-438
Cow position: chr14:12857381-12856959 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 310

Conread position: 42-574
Cow position: chr14:7599484-7600036 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 162

Conread position: 54-555
Cow position: chr14:19189756-19189239 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 287

Conread position: 70-455
Cow position: chr14:34984543-34984136 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 131

Conread position: 77-451
Cow position: chr14:34354791-34355184 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 88

Conread position: 79-574
Cow position: chr14:28988399-28987876 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 271

Conread position: 92-574
Cow position: chr14:30760879-30760389 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 68

Conread position: 131-555
Cow position: chr14:28379003-28378565 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 206

Conread position: 131-574
Cow position: chr14:20666387-20666840 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 198

Conread position: 138-430
Cow position: chr14:44847235-44847542 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 218

Conread position: 138-563
Cow position: chr14:20640001-20640432 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 190

Conread position: 139-463
Cow position: chr14:12519707-12520040 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 60

Conread position: 140-558
Cow position: chr14:20068904-20069324 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 191

Conread position: 149-552
Cow position: chr14:8488807-8488387 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 177

Conread position: 154-574
Cow position: chr14:5501542-5501971 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 172

Conread position: 154-574
Cow position: chr14:38295681-38296095 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 178

Conread position: 164-390
Cow position: chr14:1867768-1867995 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 35

Conread position: 193-574
Cow position: chr14:27792106-27791711 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 134

Conread position: 203-509
Cow position: chr14:19887499-19887817 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 204-552
Cow position: chr14:39327305-39327663 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 215-552
Cow position: chr14:23056152-23055808 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 112

Conread position: 220-539
Cow position: chr14:14621655-14621968 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 15

Conread position: 224-563
Cow position: chr14:22982426-22982076 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 226-574
Cow position: chr14:27865600-27865951 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 100

Conread position: 260-449
Cow position: chr14:5836425-5836240 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 260-450
Cow position: chr14:19851203-19851387 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 51

Conread position: 260-471
Cow position: chr14:23591897-23591693 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 260-574
Cow position: chr14:20600875-20600563 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 260-574
Cow position: chr14:25403458-25403762 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr14:41454044-41454351 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 49

Conread position: 264-552
Cow position: chr14:39779231-39778956 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 264-552
Cow position: chr14:47584164-47584446 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 266-558
Cow position: chr14:35588636-35588355 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 269-552
Cow position: chr14:12991249-12991526 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 270-528
Cow position: chr14:28708506-28708259 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 108, 46

Conread position: 274-574
Cow position: chr14:34667119-34666826 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 37

Conread position: 1-500
Cow position: chr15:25908041-25907535 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 1-517
Cow position: chr15:1776315-1776854 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 16

Conread position: 1-552
Cow position: chr15:6648259-6647695 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 160

Conread position: 1-552
Cow position: chr15:6959848-6960416 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-552
Cow position: chr15:20458485-20459051 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 330

Conread position: 1-557
Cow position: chr15:18661638-18662208 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 196

Conread position: 1-558
Cow position: chr15:31357448-31356875 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 19

Conread position: 1-563
Cow position: chr15:1329300-1329861 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 65

Conread position: 1-565
Cow position: chr15:3007687-3007109 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 1-574
Cow position: chr15:22752277-22751682 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 357

Conread position: 1-574
Cow position: chr15:37382435-37381858 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 328

Conread position: 2-435
Cow position: chr15:36355588-36355137 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 335

Conread position: 2-444
Cow position: chr15:5460977-5461437 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-513
Cow position: chr15:13076677-13077201 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 2-547
Cow position: chr15:51632236-51632796 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 183

Conread position: 3-540
Cow position: chr15:21902633-21903188 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 42

Conread position: 3-554
Cow position: chr15:33228905-33228329 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 336

Conread position: 3-565
Cow position: chr15:4918261-4918815 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 228

Conread position: 4-552
Cow position: chr15:24968601-24968042 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 335

Conread position: 4-555
Cow position: chr15:35041063-35041624 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 179

Conread position: 8-552
Cow position: chr15:62612-63173 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 324

Conread position: 12-573
Cow position: chr15:6530032-6530615 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 324

Conread position: 16-563
Cow position: chr15:1082601-1083136 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 20

Conread position: 20-552
Cow position: chr15:34894886-34895434 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 315

Conread position: 22-574
Cow position: chr15:15040644-15041208 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 22

Conread position: 47-547
Cow position: chr15:24617340-24616821 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 293

Conread position: 74-552
Cow position: chr15:13669165-13669654 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 258

Conread position: 100-552
Cow position: chr15:6226503-6226949 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 131-531
Cow position: chr15:10441912-10442321 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 194

Conread position: 138-552
Cow position: chr15:47842588-47843009 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 138-574
Cow position: chr15:23703439-23703000 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 194

Conread position: 138-574
Cow position: chr15:30046862-30047312 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 191

Conread position: 138-574
Cow position: chr15:38899093-38898652 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 22

Conread position: 145-513
Cow position: chr15:49258735-49258360 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 180

Conread position: 149-552
Cow position: chr15:22168725-22168307 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 178

Conread position: 149-554
Cow position: chr15:41583575-41583157 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 11

Conread position: 150-563
Cow position: chr15:1128644-1128233 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 183

Conread position: 152-550
Cow position: chr15:33976056-33976442 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 155-547
Cow position: chr15:24044437-24044844 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 173

Conread position: 169-444
Cow position: chr15:16927410-16927695 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 9

Conread position: 169-569
Cow position: chr15:237377-236963 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 169-572
Cow position: chr15:50957151-50957566 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 181-574
Cow position: chr15:29476203-29475801 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 146

Conread position: 185-438
Cow position: chr15:21894442-21894182 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 14

Conread position: 185-494
Cow position: chr15:33511470-33511151 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 214-455
Cow position: chr15:24993911-24994156 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 108

Conread position: 214-554
Cow position: chr15:19403570-19403228 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 260-438
Cow position: chr15:19771962-19771790 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 260-444
Cow position: chr15:35643011-35642833 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr15:42143384-42143082 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 149, 48

Conread position: 264-523
Cow position: chr15:52148749-52148496 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 264-543
Cow position: chr15:276274-276012 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 264-554
Cow position: chr15:32878026-32878315 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 239, 0

Conread position: 264-562
Cow position: chr15:5692242-5691953 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 47

Conread position: 271-552
Cow position: chr15:39082723-39082450 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 291-563
Cow position: chr15:23265048-23265309 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 22

Conread position: 1-465
Cow position: chr16:2963053-2962572 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 333

Conread position: 1-465
Cow position: chr16:7673574-7673098 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 180

Conread position: 1-484
Cow position: chr16:49096768-49097268 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-528
Cow position: chr16:49253458-49252925 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 1-550
Cow position: chr16:16095999-16096578 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 362

Conread position: 1-552
Cow position: chr16:25075397-25075965 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr16:56281995-56281427 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-555
Cow position: chr16:51042905-51043477 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 348

Conread position: 1-558
Cow position: chr16:42970658-42970085 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 332

Conread position: 1-573
Cow position: chr16:5350704-5350114 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 330

Conread position: 1-574
Cow position: chr16:600224-600807 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 140

Conread position: 1-574
Cow position: chr16:7457175-7456602 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-574
Cow position: chr16:49126908-49126322 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 176

Conread position: 2-544
Cow position: chr16:39645834-39646386 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 328

Conread position: 2-574
Cow position: chr16:46223700-46223099 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 199

Conread position: 3-476
Cow position: chr16:45703917-45703425 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 3-547
Cow position: chr16:22124893-22124332 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 51

Conread position: 3-552
Cow position: chr16:11100520-11099957 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 325

Conread position: 3-558
Cow position: chr16:18678482-18679043 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 89

Conread position: 3-558
Cow position: chr16:42079554-42078996 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 76

Conread position: 3-568
Cow position: chr16:24925855-24926438 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 12

Conread position: 3-574
Cow position: chr16:4712179-4712763 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 76

Conread position: 3-574
Cow position: chr16:51500204-51500797 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 332

Conread position: 4-475
Cow position: chr16:42752157-42752642 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 40

Conread position: 7-552
Cow position: chr16:45654765-45654194 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 509

Conread position: 14-552
Cow position: chr16:30311810-30311270 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 162

Conread position: 20-552
Cow position: chr16:11568795-11568274 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 32-552
Cow position: chr16:47242257-47242792 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 303

Conread position: 32-565
Cow position: chr16:47247923-47248470 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 299

Conread position: 45-519
Cow position: chr16:49450015-49449543 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 92

Conread position: 45-552
Cow position: chr16:29206145-29205619 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 296

Conread position: 56-554
Cow position: chr16:51480915-51481429 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 19

Conread position: 59-552
Cow position: chr16:28112589-28112081 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 108

Conread position: 76-562
Cow position: chr16:31978827-31978337 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 44

Conread position: 81-455
Cow position: chr16:53087237-53086841 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 95-543
Cow position: chr16:23066040-23066500 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 102-563
Cow position: chr16:55682672-55683144 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 229

Conread position: 131-375
Cow position: chr16:53409838-53409589 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 191

Conread position: 131-455
Cow position: chr16:29678217-29677896 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 37

Conread position: 131-537
Cow position: chr16:42092965-42092551 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 198

Conread position: 131-552
Cow position: chr16:24426912-24427344 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 131-558
Cow position: chr16:8651767-8652203 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 195

Conread position: 132-451
Cow position: chr16:37453390-37453065 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 77, 196

Conread position: 134-550
Cow position: chr16:41590202-41590617 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 40

Conread position: 139-494
Cow position: chr16:50873889-50873525 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 140-459
Cow position: chr16:16057745-16057406 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 336

Conread position: 154-553
Cow position: chr16:41895790-41896185 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 175

Conread position: 162-574
Cow position: chr16:40561666-40562089 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 167

Conread position: 163-554
Cow position: chr16:37670304-37669888 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 164-558
Cow position: chr16:33777250-33777664 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 174-547
Cow position: chr16:18141872-18141495 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 175-565
Cow position: chr16:28431813-28431407 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 152

Conread position: 180-558
Cow position: chr16:18205420-18205817 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 148

Conread position: 193-555
Cow position: chr16:50905937-50906310 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 133

Conread position: 204-563
Cow position: chr16:4911033-4910680 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 6

Conread position: 209-574
Cow position: chr16:23475582-23475955 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 113

Conread position: 212-574
Cow position: chr16:19643393-19643755 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 214-444
Cow position: chr16:19671070-19670827 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 139

Conread position: 214-465
Cow position: chr16:56523835-56523591 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 145, 99

Conread position: 214-558
Cow position: chr16:5654010-5654354 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 111

Conread position: 217-565
Cow position: chr16:39474640-39474285 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 219-465
Cow position: chr16:29036908-29037153 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 106

Conread position: 221-555
Cow position: chr16:48398742-48398403 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 106

Conread position: 260-444
Cow position: chr16:33791083-33791261 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 260-491
Cow position: chr16:9787134-9787358 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 260-550
Cow position: chr16:55308986-55308691 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 66, 53

Conread position: 260-554
Cow position: chr16:7256102-7256390 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 178, 49

Conread position: 260-554
Cow position: chr16:51710566-51710286 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr16:17142485-17142794 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 114

Conread position: 264-440
Cow position: chr16:15848580-15848411 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 264-465
Cow position: chr16:22849665-22849860 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 264-551
Cow position: chr16:1815371-1815090 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 200, 0

Conread position: 264-565
Cow position: chr16:47773355-47773644 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 264-574
Cow position: chr16:33177208-33177511 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-412
Cow position: chr17:997812-997402 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 65

Conread position: 1-455
Cow position: chr17:36790430-36790891 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 138

Conread position: 1-465
Cow position: chr17:2201661-2202142 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-465
Cow position: chr17:10445522-10445998 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 106

Conread position: 1-480
Cow position: chr17:25834781-25835277 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-513
Cow position: chr17:4123435-4122914 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 216

Conread position: 1-535
Cow position: chr17:42258236-42258771 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 1-552
Cow position: chr17:5899206-5898644 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 64

Conread position: 1-552
Cow position: chr17:20391138-20391706 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position: chr17:3131372-3131948 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 14

Conread position: 1-571
Cow position: chr17:29471794-29472375 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 334

Conread position: 1-573
Cow position: chr17:34317399-34316807 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 19

Conread position: 1-574
Cow position: chr17:6263218-6263811 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 336

Conread position: 2-455
Cow position: chr17:28359142-28359617 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 93

Conread position: 2-563
Cow position: chr17:5748484-5747905 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 16

Conread position: 2-565
Cow position: chr17:6081857-6082432 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 2-573
Cow position: chr17:17240649-17240052 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 24

Conread position: 2-574
Cow position: chr17:17221672-17222243 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 3-552
Cow position: chr17:33289331-33288773 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 62

Conread position: 4-552
Cow position: chr17:2006017-2006584 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 5-554
Cow position: chr17:40105340-40104791 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 63

Conread position: 5-574
Cow position: chr17:20233563-20234127 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 15-550
Cow position: chr17:28539369-28539912 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 44

Conread position: 26-539
Cow position: chr17:18201115-18201642 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 26-552
Cow position: chr17:31232607-31232049 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 192

Conread position: 35-552
Cow position: chr17:13144328-13143809 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 36-547
Cow position: chr17:40802164-40802688 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 42-573
Cow position: chr17:40771179-40771733 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 294

Conread position: 45-572
Cow position: chr17:11638249-11638774 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 65-550
Cow position: chr17:20847917-20848409 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 129

Conread position: 71-552
Cow position: chr17:20358264-20358756 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 261

Conread position: 93-563
Cow position: chr17:20800219-20800707 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 243

Conread position: 129-543
Cow position: chr17:6565928-6566343 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 10

Conread position: 131-419
Cow position: chr17:21115755-21115456 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 194

Conread position: 131-574
Cow position: chr17:21874867-21874414 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 68

Conread position: 132-572
Cow position: chr17:4602088-4601647 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 67

Conread position: 137-563
Cow position: chr17:24549627-24550062 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 49

Conread position: 137-574
Cow position: chr17:30664733-30665174 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 111

Conread position: 138-563
Cow position: chr17:8926778-8926326 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 139-552
Cow position: chr17:10009106-10008683 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 186

Conread position: 139-552
Cow position: chr17:12059633-12059210 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 29

Conread position: 143-543
Cow position: chr17:30539787-30539375 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 186

Conread position: 154-554
Cow position: chr17:3388339-3388742 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 15

Conread position: 161-465
Cow position: chr17:32280393-32280077 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 165-555
Cow position: chr17:44862323-44861912 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 162

Conread position: 171-552
Cow position: chr17:41029438-41029834 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 172-563
Cow position: chr17:11102299-11101902 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 259

Conread position: 175-574
Cow position: chr17:40405801-40406207 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 155

Conread position: 177-574
Cow position: chr17:9176186-9175780 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 5

Conread position: 183-438
Cow position: chr17:30712542-30712807 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 144

Conread position: 185-574
Cow position: chr17:26230443-26230842 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 140

Conread position: 187-467
Cow position: chr17:25341028-25340733 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 191-573
Cow position: chr17:10529235-10528839 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 137

Conread position: 217-574
Cow position: chr17:21038820-21039178 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 221-538
Cow position: chr17:32994069-32993747 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 221-554
Cow position: chr17:32989037-32989374 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 226-555
Cow position: chr17:3154220-3153888 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 258-552
Cow position: chr17:15318935-15319223 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-548
Cow position: chr17:34676906-34677190 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 194, 48

Conread position: 260-552
Cow position: chr17:3743809-3744095 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr17:3781630-3781926 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 93, 53

Conread position: 260-560
Cow position: chr17:23063310-23063601 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 51

Conread position: 260-569
Cow position: chr17:20993447-20993143 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 63

Conread position: 260-573
Cow position: chr17:14265958-14265657 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-574
Cow position: chr17:18266657-18266973 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 51

Conread position: 261-554
Cow position: chr17:33934150-33933854 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 203, 48

Conread position: 261-563
Cow position: chr17:1410648-1410351 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 48

Conread position: 261-574
Cow position: chr17:18494930-18494612 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 130, 62

Conread position: 264-552
Cow position: chr17:23517567-23517287 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 264-555
Cow position: chr17:26764612-26764897 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 275-552
Cow position: chr17:43178177-43177916 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 36

Conread position: 275-563
Cow position: chr17:1493546-1493264 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 36

Conread position: 277-444
Cow position: chr17:24787451-24787290 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 278-520
Cow position: chr17:39857025-39857261 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 1-463
Cow position: chr18:1955284-1954805 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 335

Conread position: 1-465
Cow position: chr18:5536560-5537038 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 48

Conread position: 1-565
Cow position: chr18:42966077-42966674 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 329

Conread position: 1-574
Cow position: chr18:7076012-7076594 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 86

Conread position: 1-574
Cow position: chr18:7649237-7649823 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 164

Conread position: 1-574
Cow position: chr18:43563467-43564057 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 86

Conread position: 2-547
Cow position: chr18:13508483-13507929 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 2-574
Cow position: chr18:54033296-54033868 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 3-440
Cow position: chr18:36233281-36232835 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 38

Conread position: 3-455
Cow position: chr18:36648978-36649438 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 313
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 212, 133

Conread position: 3-574
Cow position: chr18:22790821-22790245 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 79

Conread position: 5-572
Cow position: chr18:11866616-11867174 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 90

Conread position: 14-574
Cow position: chr18:28658653-28658084 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 30

Conread position: 21-562
Cow position: chr18:19645434-19645994 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 23-573
Cow position: chr18:45978977-45979524 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 21

Conread position: 41-555
Cow position: chr18:19116180-19115644 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 297

Conread position: 42-563
Cow position: chr18:9089004-9089520 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 92

Conread position: 48-464
Cow position: chr18:268762-268332 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 288

Conread position: 49-552
Cow position: chr18:29768198-29768721 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 196

Conread position: 51-502
Cow position: chr18:32283158-32283630 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 287

Conread position: 51-574
Cow position: chr18:32284677-32285218 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 287

Conread position: 51-574
Cow position: chr18:32300823-32301363 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 286

Conread position: 58-533
Cow position: chr18:48450965-48451458 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 287

Conread position: 70-565
Cow position: chr18:31309431-31309943 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 262

Conread position: 77-552
Cow position: chr18:42422089-42421597 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 255

Conread position: 83-563
Cow position: chr18:50638130-50637644 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 74

Conread position: 85-572
Cow position: chr18:8967328-8967826 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 251

Conread position: 88-547
Cow position: chr18:33605981-33606435 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 89-435
Cow position: chr18:10097487-10097857 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 122

Conread position: 93-574
Cow position: chr18:7955480-7955971 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 95-574
Cow position: chr18:32218919-32218427 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 239

Conread position: 111-552
Cow position: chr18:1611112-1611570 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 131-441
Cow position: chr18:249507-249179 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 87, 13

Conread position: 131-563
Cow position: chr18:37024181-37023738 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 200

Conread position: 132-550
Cow position: chr18:33756265-33756684 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 135-552
Cow position: chr18:9007544-9007956 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 139-558
Cow position: chr18:13292893-13293323 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 194

Conread position: 139-558
Cow position: chr18:23700483-23700055 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 60

Conread position: 140-436
Cow position: chr18:24635408-24635718 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 76, 37

Conread position: 151-480
Cow position: chr18:19760908-19761242 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 29

Conread position: 156-552
Cow position: chr18:37691194-37690803 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 171

Conread position: 159-444
Cow position: chr18:23137812-23137512 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 10

Conread position: 159-552
Cow position: chr18:27798400-27797997 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 166

Conread position: 165-558
Cow position: chr18:52899478-52899881 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 157

Conread position: 170-550
Cow position: chr18:24342040-24342432 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 185-455
Cow position: chr18:11680122-11680403 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 143

Conread position: 187-430
Cow position: chr18:44484608-44484366 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 29, 129

Conread position: 187-554
Cow position: chr18:24712242-24711861 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 267

Conread position: 194-563
Cow position: chr18:37002075-37002448 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 201-558
Cow position: chr18:13173079-13172708 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 131

Conread position: 203-450
Cow position: chr18:25206845-25206592 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 59, 7

Conread position: 206-574
Cow position: chr18:28101093-28101457 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 56

Conread position: 214-451
Cow position: chr18:48291417-48291174 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 111

Conread position: 214-471
Cow position: chr18:29759180-29759453 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 119

Conread position: 214-552
Cow position: chr18:40203332-40202991 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 48, 123

Conread position: 214-555
Cow position: chr18:51756572-51756906 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 214-563
Cow position: chr18:51191290-51190936 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 113

Conread position: 214-574
Cow position: chr18:23631116-23630748 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 215-574
Cow position: chr18:22065904-22065533 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 116

Conread position: 222-552
Cow position: chr18:56168438-56168112 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 96

Conread position: 231-457
Cow position: chr18:10890735-10890966 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 24

Conread position: 235-552
Cow position: chr18:49655204-49655522 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 98

Conread position: 260-513
Cow position: chr18:30186396-30186137 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 83

Conread position: 260-539
Cow position: chr18:19850223-19849956 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 128, 53

Conread position: 260-547
Cow position: chr18:33793220-33793511 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 211, 0

Conread position: 260-547
Cow position: chr18:51406369-51406101 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 260-552
Cow position: chr18:3179942-3180228 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 51

Conread position: 260-552
Cow position: chr18:4540350-4540068 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 260-552
Cow position: chr18:24021913-24022188 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 260-555
Cow position: chr18:39709412-39709701 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 260-558
Cow position: chr18:7964753-7965045 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr18:11183461-11183771 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 49, 70

Conread position: 261-552
Cow position: chr18:52635558-52635277 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 261-574
Cow position: chr18:35636824-35636520 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 264-547
Cow position: chr18:7351544-7351262 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 47

Conread position: 264-552
Cow position: chr18:19193819-19193544 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 269-520
Cow position: chr18:13877204-13876953 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 269-574
Cow position: chr18:49161925-49161626 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-438
Cow position: chr19:48697877-48698326 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 1-484
Cow position: chr19:35081822-35082322 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-513
Cow position: chr19:12787637-12788169 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 40

Conread position: 1-541
Cow position: chr19:29071445-29070888 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 44

Conread position: 1-552
Cow position: chr19:12614256-12613694 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 320

Conread position: 1-552
Cow position: chr19:33932878-33932313 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 175

Conread position: 1-574
Cow position: chr19:730437-729888 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 26

Conread position: 2-305
Cow position: chr19:14580875-14581193 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-550
Cow position: chr19:38397023-38396445 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 2-551
Cow position: chr19:4379546-4380106 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 356
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 13

Conread position: 2-565
Cow position: chr19:39923930-39924509 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 23

Conread position: 3-444
Cow position: chr19:39987296-39986835 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 32

Conread position: 3-463
Cow position: chr19:15766374-15766844 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 9

Conread position: 3-547
Cow position: chr19:25085785-25086361 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 3-547
Cow position: chr19:48408784-48409339 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 387

Conread position: 8-444
Cow position: chr19:7491684-7492132 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 156

Conread position: 8-555
Cow position: chr19:24358970-24358392 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 339

Conread position: 29-500
Cow position: chr19:52137537-52137037 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 305

Conread position: 43-574
Cow position: chr19:42664508-42663967 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 130

Conread position: 57-555
Cow position: chr19:43440487-43440995 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 28

Conread position: 65-569
Cow position: chr19:9293580-9294114 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 117

Conread position: 131-315
Cow position: chr19:32952939-32953122 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 38

Conread position: 154-451
Cow position: chr19:5434627-5434326 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 154-451
Cow position: chr19:47187745-47187434 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 94

Conread position: 161-564
Cow position: chr19:46821875-46822281 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 183-552
Cow position: chr19:4446166-4445791 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 140

Conread position: 185-529
Cow position: chr19:7542877-7543228 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 133

Conread position: 185-558
Cow position: chr19:10786897-10786524 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 186-574
Cow position: chr19:43431864-43431470 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 192-552
Cow position: chr19:39577110-39576741 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 133

Conread position: 203-468
Cow position: chr19:10212855-10213127 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 11

Conread position: 203-503
Cow position: chr19:39649809-39649500 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 7

Conread position: 203-550
Cow position: chr19:34287285-34287640 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 214-574
Cow position: chr19:34956213-34955846 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 219-520
Cow position: chr19:49358894-49358588 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 192

Conread position: 259-555
Cow position: chr19:53657442-53657731 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 66

Conread position: 260-442
Cow position: chr19:38638485-38638306 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 51

Conread position: 260-455
Cow position: chr19:11376891-11376703 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 59

Conread position: 260-548
Cow position: chr19:39056788-39057067 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position: chr19:9582849-9583144 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 183, 53

Conread position: 260-554
Cow position: chr19:20093660-20093372 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 188, 49

Conread position: 260-555
Cow position: chr19:21380383-21380097 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 260-558
Cow position: chr19:31825488-31825178 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 185, 0

Conread position: 260-561
Cow position: chr19:25168748-25168457 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 260-562
Cow position: chr19:30232288-30232568 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 260-562
Cow position: chr19:42417410-42417702 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-569
Cow position: chr19:55968144-55967846 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 261-552
Cow position: chr19:7612174-7612454 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 0

Conread position: 264-443
Cow position: chr19:36844772-36844946 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 47

Conread position: 265-511
Cow position: chr19:33286801-33287038 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 1-442
Cow position: chr2:12237986-12237531 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 25

Conread position: 1-451
Cow position: chr2:1202444-1202885 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 206

Conread position: 1-480
Cow position: chr2:30657319-30656823 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-539
Cow position: chr2:31783222-31783772 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 58

Conread position: 1-550
Cow position: chr2:23271658-23271091 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 170

Conread position: 1-552
Cow position: chr2:1186819-1186250 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 251

Conread position: 1-555
Cow position: chr2:11152944-11152383 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 94

Conread position: 1-558
Cow position: chr2:8121735-8122293 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 1-565
Cow position: chr2:12442996-12443576 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 64

Conread position: 1-565
Cow position: chr2:23994988-23994412 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 330

Conread position: 1-572
Cow position: chr2:43978634-43978039 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 112

Conread position: 1-574
Cow position: chr2:279212-278628 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 67

Conread position: 1-574
Cow position: chr2:4017581-4017000 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 91

Conread position: 1-574
Cow position: chr2:12736797-12736219 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-574
Cow position: chr2:36983689-36984278 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 332

Conread position: 1-574
Cow position: chr2:57557657-57557064 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 2-543
Cow position: chr2:14853596-14854147 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 341

Conread position: 2-544
Cow position: chr2:11696419-11696963 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 41

Conread position: 2-550
Cow position: chr2:85739404-85739964 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 334

Conread position: 2-565
Cow position: chr2:3623560-3624139 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 332

Conread position: 2-570
Cow position: chr2:71164441-71163855 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 42

Conread position: 2-574
Cow position: chr2:30751446-30752028 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 332

Conread position: 3-434
Cow position: chr2:19288288-19287839 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 332

Conread position: 3-513
Cow position: chr2:31451099-31451633 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 346
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 39

Conread position: 3-550
Cow position: chr2:9688266-9687737 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 134

Conread position: 3-552
Cow position: chr2:35949376-35948825 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 176

Conread position: 3-562
Cow position: chr2:59397778-59397207 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 206

Conread position: 3-574
Cow position: chr2:41451499-41452091 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 332

Conread position: 5-550
Cow position: chr2:16514065-16514629 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 335

Conread position: 8-574
Cow position: chr2:43596886-43596308 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 324

Conread position: 15-455
Cow position: chr2:28632832-28632375 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 317

Conread position: 24-550
Cow position: chr2:40727663-40728201 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 186

Conread position: 32-574
Cow position: chr2:6539936-6539376 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 307

Conread position: 48-437
Cow position: chr2:82268003-82267603 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 153

Conread position: 56-544
Cow position: chr2:9173938-9173427 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 137

Conread position: 71-490
Cow position: chr2:6063804-6063370 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 164

Conread position: 73-574
Cow position: chr2:14825631-14826148 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 114

Conread position: 74-574
Cow position: chr2:47783731-47784234 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 52

Conread position: 84-563
Cow position: chr2:68488649-68488157 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 258

Conread position: 87-462
Cow position: chr2:1657651-1658031 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 130

Conread position: 94-572
Cow position: chr2:2672895-2673383 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 238

Conread position: 130-555
Cow position: chr2:13579652-13580087 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 204

Conread position: 131-510
Cow position: chr2:45562864-45563252 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 131-552
Cow position: chr2:7629513-7629082 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-552
Cow position: chr2:50061077-50061508 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 133-552
Cow position: chr2:36056385-36055956 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 123

Conread position: 135-555
Cow position: chr2:76314438-76314015 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 88

Conread position: 136-455
Cow position: chr2:29802720-29802390 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 196

Conread position: 138-552
Cow position: chr2:26483429-26483005 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 141-554
Cow position: chr2:73467082-73466671 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 178

Conread position: 151-444
Cow position: chr2:9370367-9370063 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 173

Conread position: 154-554
Cow position: chr2:72527395-72527795 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 168

Conread position: 154-560
Cow position: chr2:49608028-49608436 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 168

Conread position: 156-552
Cow position: chr2:18997178-18997566 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 167-574
Cow position: chr2:31119463-31119878 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 169-565
Cow position: chr2:47454184-47453784 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 156

Conread position: 177-561
Cow position: chr2:86004986-86004603 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 39, 25

Conread position: 179-574
Cow position: chr2:71624929-71624516 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 318

Conread position: 181-565
Cow position: chr2:12371028-12371422 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 144

Conread position: 185-453
Cow position: chr2:26102210-26102493 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 49

Conread position: 197-574
Cow position: chr2:1365416-1365027 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 130

Conread position: 203-547
Cow position: chr2:13467191-13467534 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 203-552
Cow position: chr2:82581445-82581090 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 210-493
Cow position: chr2:47467101-47467392 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 115

Conread position: 214-523
Cow position: chr2:39051487-39051801 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 27

Conread position: 214-555
Cow position: chr2:27358540-27358884 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 111

Conread position: 214-558
Cow position: chr2:64197500-64197136 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 113

Conread position: 214-574
Cow position: chr2:64532841-64533204 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 216-463
Cow position: chr2:46058835-46058578 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 109

Conread position: 217-544
Cow position: chr2:36423530-36423848 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 110

Conread position: 218-574
Cow position: chr2:44170059-44170419 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 103

Conread position: 220-438
Cow position: chr2:39500480-39500705 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 103

Conread position: 221-507
Cow position: chr2:52409771-52409474 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 106

Conread position: 223-574
Cow position: chr2:45463056-45462713 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 89

Conread position: 227-528
Cow position: chr2:30352773-30352474 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 236-574
Cow position: chr2:10124935-10124594 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 242-455
Cow position: chr2:50561803-50562019 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 77

Conread position: 260-451
Cow position: chr2:32490146-32489955 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 260-455
Cow position: chr2:65036859-65036664 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 260-480
Cow position: chr2:19872015-19872237 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 183, 53

Conread position: 260-547
Cow position: chr2:45710596-45710872 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-549
Cow position: chr2:56737802-56737506 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 184, 51

Conread position: 260-552
Cow position: chr2:70674292-70674573 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 260-558
Cow position: chr2:71800535-71800243 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 53

Conread position: 260-558
Cow position: chr2:81927402-81927702 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 260-562
Cow position: chr2:14883838-14884133 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 53

Conread position: 260-563
Cow position: chr2:57775904-57776200 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-563
Cow position: chr2:63865772-63865480 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 260-563
Cow position: chr2:70580162-70579861 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 260-572
Cow position: chr2:55387105-55387405 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position: chr2:36146528-36146232 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position: chr2:42383959-42384265 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-463
Cow position: chr2:62744738-62744543 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 264-525
Cow position: chr2:55302225-55302485 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 52

Conread position: 264-542
Cow position: chr2:27338228-27337944 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 189, 75

Conread position: 264-558
Cow position: chr2:82270029-82270316 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 51

Conread position: 264-572
Cow position: chr2:86100440-86100737 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 264-574
Cow position: chr2:988250-988553 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 264-574
Cow position: chr2:26439166-26438866 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 265-574
Cow position: chr2:74106456-74106147 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 48

Conread position: 269-560
Cow position: chr2:38628480-38628756 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 272-574
Cow position: chr2:31355274-31355566 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 276-574
Cow position: chr2:85249922-85250216 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 124

Conread position: 1-543
Cow position: chr20:10099679-10100238 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-565
Cow position: chr20:34458714-34458137 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 61

Conread position: 2-550
Cow position: chr20:21018878-21019449 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 341

Conread position: 2-574
Cow position: chr20:31076857-31077453 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 183

Conread position: 2-574
Cow position: chr20:40781296-40781872 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 329

Conread position: 3-419
Cow position: chr20:22006775-22007206 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 17

Conread position: 3-558
Cow position: chr20:6258736-6258175 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 62

Conread position: 3-558
Cow position: chr20:15117365-15117939 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 17

Conread position: 3-574
Cow position: chr20:8429053-8429646 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 348

Conread position: 4-559
Cow position: chr20:20353586-20353026 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 6-574
Cow position: chr20:23791933-23792512 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 35

Conread position: 11-562
Cow position: chr20:4945919-4945353 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 11-574
Cow position: chr20:6239316-6238742 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 33

Conread position: 12-550
Cow position: chr20:21324437-21325008 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 80

Conread position: 43-554
Cow position: chr20:9474251-9473729 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 49-404
Cow position: chr20:4205250-4205611 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 273

Conread position: 50-554
Cow position: chr20:41976801-41977306 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 69

Conread position: 62-558
Cow position: chr20:35970321-35970831 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 274

Conread position: 65-563
Cow position: chr20:34900200-34900713 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 117

Conread position: 80-555
Cow position: chr20:17831237-17831731 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 86-484
Cow position: chr20:18162427-18162842 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 246

Conread position: 93-420
Cow position: chr20:4911506-4911840 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 123, 41

Conread position: 126-515
Cow position: chr20:7527915-7527515 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 131-574
Cow position: chr20:12839510-12839958 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 68

Conread position: 138-484
Cow position: chr20:14926106-14926461 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 188

Conread position: 138-552
Cow position: chr20:7710746-7710327 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 52

Conread position: 138-558
Cow position: chr20:3599939-3599501 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 75

Conread position: 138-574
Cow position: chr20:8482743-8482305 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 139-572
Cow position: chr20:34202109-34202550 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 145-574
Cow position: chr20:39742787-39743220 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 101, 57

Conread position: 150-552
Cow position: chr20:15821786-15822199 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 262

Conread position: 154-572
Cow position: chr20:21371785-21372219 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 100, 62

Conread position: 169-552
Cow position: chr20:5104944-5104552 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 160

Conread position: 184-552
Cow position: chr20:3781927-3781543 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 186-548
Cow position: chr20:5939469-5939090 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 141

Conread position: 188-574
Cow position: chr20:22313647-22313257 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 137

Conread position: 189-574
Cow position: chr20:6096972-6096587 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 192-574
Cow position: chr20:34836351-34835966 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 132

Conread position: 195-574
Cow position: chr20:14735170-14735577 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 7, 138

Conread position: 203-546
Cow position: chr20:38935681-38935336 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 214-558
Cow position: chr20:11614506-11614154 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 215-465
Cow position: chr20:1191430-1191688 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 110

Conread position: 241-558
Cow position: chr20:11176669-11176358 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 29

Conread position: 260-554
Cow position: chr20:23065246-23064944 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 47, 66

Conread position: 260-554
Cow position: chr20:33363112-33363403 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 260-563
Cow position: chr20:14832028-14831718 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 46

Conread position: 260-573
Cow position: chr20:36780138-36779827 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 65

Conread position: 260-574
Cow position: chr20:21959458-21959150 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 264-574
Cow position: chr20:26076683-26076985 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 277-558
Cow position: chr20:31747009-31746737 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 1-558
Cow position: chr21:5595002-5595569 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 175

Conread position: 1-558
Cow position: chr21:13111458-13110887 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-558
Cow position: chr21:28616944-28617497 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 119

Conread position: 1-563
Cow position: chr21:15546025-15545455 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 242

Conread position: 2-474
Cow position: chr21:16278069-16278537 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 2-485
Cow position: chr21:31252665-31253165 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 2-540
Cow position: chr21:6623488-6624034 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 63

Conread position: 2-544
Cow position: chr21:2419864-2420400 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 24

Conread position: 2-550
Cow position: chr21:26829889-26829342 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 88

Conread position: 2-562
Cow position: chr21:18289001-18289576 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 332

Conread position: 2-563
Cow position: chr21:37298808-37299384 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 173

Conread position: 3-492
Cow position: chr21:28908473-28907994 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 203

Conread position: 3-544
Cow position: chr21:20262998-20262438 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 338

Conread position: 3-554
Cow position: chr21:2366686-2367246 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 114

Conread position: 3-558
Cow position: chr21:28810913-28810357 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 3-565
Cow position: chr21:29214817-29214232 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 186

Conread position: 31-554
Cow position: chr21:33420349-33419811 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 40-532
Cow position: chr21:33579563-33580071 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 300

Conread position: 44-447
Cow position: chr21:10000903-10000490 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 160

Conread position: 44-463
Cow position: chr21:21076515-21076942 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 284

Conread position: 59-558
Cow position: chr21:8126389-8125892 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 61-552
Cow position: chr21:20926090-20925603 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 76

Conread position: 69-574
Cow position: chr21:24130501-24131002 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 82-574
Cow position: chr21:33209621-33210124 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 85-552
Cow position: chr21:4999059-4998583 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 104

Conread position: 89-522
Cow position: chr21:44657745-44658191 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 89-544
Cow position: chr21:4282439-4281972 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 246

Conread position: 98-444
Cow position: chr21:2261249-2260876 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 234

Conread position: 151-554
Cow position: chr21:23683031-23683460 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 153-552
Cow position: chr21:47823777-47823368 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 176

Conread position: 154-469
Cow position: chr21:22464285-22464611 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 170

Conread position: 159-570
Cow position: chr21:44671256-44671675 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 45

Conread position: 169-532
Cow position: chr21:36756119-36756498 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 260

Conread position: 174-552
Cow position: chr21:912445-912063 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 153

Conread position: 180-552
Cow position: chr21:20549400-20549007 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 142

Conread position: 183-501
Cow position: chr21:13159669-13159998 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 137

Conread position: 201-555
Cow position: chr21:38691737-38692096 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 129

Conread position: 203-451
Cow position: chr21:8451409-8451647 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 214-453
Cow position: chr21:6051035-6051289 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 109

Conread position: 214-552
Cow position: chr21:46912101-46912445 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 115

Conread position: 220-574
Cow position: chr21:42914178-42913822 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 257-555
Cow position: chr21:4794836-4795132 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 56

Conread position: 260-460
Cow position: chr21:297341-297531 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 260-462
Cow position: chr21:37719922-37719713 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 260-532
Cow position: chr21:9981070-9980817 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 260-547
Cow position: chr21:28881767-28882041 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position: chr21:17539352-17539638 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-573
Cow position: chr21:40244052-40244360 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 51

Conread position: 260-573
Cow position: chr21:46462809-46463115 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 53

Conread position: 260-574
Cow position: chr21:18494598-18494891 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 264-511
Cow position: chr21:15976263-15976504 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 191, 45

Conread position: 264-547
Cow position: chr21:937674-937937 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 266-574
Cow position: chr21:34738223-34738526 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 50

Conread position: 269-547
Cow position: chr21:16612256-16612528 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 444-574
Cow position: chr21:41597611-41597741 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position: chr22:11922562-11922253 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 132, 110

Conread position: 1-539
Cow position: chr22:32650783-32651331 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 219

Conread position: 1-542
Cow position: chr22:31870979-31870423 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 210

Conread position: 1-544
Cow position: chr22:25659263-25658706 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 165

Conread position: 1-552
Cow position: chr22:40373878-40374443 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 91

Conread position: 1-558
Cow position: chr22:42499873-42499303 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 332

Conread position: 1-565
Cow position: chr22:39902874-39903455 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-574
Cow position: chr22:10302280-10302869 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 43

Conread position: 1-574
Cow position: chr22:31212855-31213432 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 91

Conread position: 2-460
Cow position: chr22:47462854-47463316 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 43

Conread position: 2-574
Cow position: chr22:46666220-46665643 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 3-563
Cow position: chr22:13017512-13016945 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 62

Conread position: 5-558
Cow position: chr22:21502016-21502582 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 64

Conread position: 13-574
Cow position: chr22:32891989-32892554 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 121

Conread position: 19-543
Cow position: chr22:22154894-22155428 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 116

Conread position: 40-565
Cow position: chr22:42923551-42923009 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 292

Conread position: 51-574
Cow position: chr22:43788817-43788268 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 172

Conread position: 54-558
Cow position: chr22:25206644-25206127 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 11

Conread position: 72-555
Cow position: chr22:10920512-10920024 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 20

Conread position: 80-574
Cow position: chr22:17993692-17993172 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 284

Conread position: 94-452
Cow position: chr22:35534016-35533640 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 249

Conread position: 94-570
Cow position: chr22:30712112-30712606 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 239

Conread position: 100-565
Cow position: chr22:22135580-22136062 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 232

Conread position: 114-563
Cow position: chr22:27577123-27577581 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 130-560
Cow position: chr22:30954445-30954884 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 83

Conread position: 131-438
Cow position: chr22:36546728-36546413 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 85, 188

Conread position: 133-572
Cow position: chr22:40590306-40590746 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 191

Conread position: 138-574
Cow position: chr22:11612841-11613279 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 191

Conread position: 141-568
Cow position: chr22:42934078-42933635 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 262

Conread position: 149-563
Cow position: chr22:13950606-13951021 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 154-564
Cow position: chr22:10415345-10415764 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 7

Conread position: 156-547
Cow position: chr22:15059402-15059797 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 168

Conread position: 156-554
Cow position: chr22:8303415-8303012 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 161-555
Cow position: chr22:779816-780213 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 63

Conread position: 161-565
Cow position: chr22:39748178-39747759 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 290

Conread position: 164-412
Cow position: chr22:6718818-6719076 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 161

Conread position: 172-554
Cow position: chr22:3332311-3332704 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 156

Conread position: 173-555
Cow position: chr22:21567450-21567837 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 40

Conread position: 185-550
Cow position: chr22:26315939-26316308 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 189-514
Cow position: chr22:876987-877320 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 143

Conread position: 189-554
Cow position: chr22:28314907-28315269 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 72

Conread position: 192-552
Cow position: chr22:14882644-14882273 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 143

Conread position: 194-555
Cow position: chr22:41045456-41045074 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 203-462
Cow position: chr22:10323190-10323457 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 7

Conread position: 210-571
Cow position: chr22:7912971-7913331 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 120

Conread position: 214-412
Cow position: chr22:3540110-3540316 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 109

Conread position: 214-574
Cow position: chr22:28370448-28370805 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 99

Conread position: 215-455
Cow position: chr22:533925-534173 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 152

Conread position: 216-552
Cow position: chr22:5467875-5467533 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 109

Conread position: 222-552
Cow position: chr22:13840644-13840974 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 82

Conread position: 248-544
Cow position: chr22:6123346-6123067 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 253-517
Cow position: chr22:32698339-32698582 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 258-563
Cow position: chr22:16236101-16235803 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 55

Conread position: 259-554
Cow position: chr22:13720983-13720685 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 198, 54

Conread position: 260-463
Cow position: chr22:3254246-3254050 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 260-547
Cow position: chr22:18258778-18259060 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-550
Cow position: chr22:34476450-34476169 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 260-552
Cow position: chr22:1710116-1710411 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 51

Conread position: 260-554
Cow position: chr22:10532047-10532333 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-555
Cow position: chr22:26151566-26151280 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 49

Conread position: 260-558
Cow position: chr22:19822975-19823263 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 260-565
Cow position: chr22:8357165-8357466 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 57

Conread position: 260-572
Cow position: chr22:4337660-4337961 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 51

Conread position: 260-574
Cow position: chr22:13889475-13889775 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 48

Conread position: 261-476
Cow position: chr22:25537539-25537751 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 171, 0

Conread position: 261-527
Cow position: chr22:16292132-16292388 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 52

Conread position: 261-558
Cow position: chr22:10161518-10161804 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 264-552
Cow position: chr22:11489097-11489374 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 45

Conread position: 264-552
Cow position: chr22:24527504-24527228 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 218, 47

Conread position: 264-558
Cow position: chr22:15859568-15859847 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 264-562
Cow position: chr22:16449872-16450166 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 52

Conread position: 264-571
Cow position: chr22:30689188-30689487 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 264-572
Cow position: chr22:18196063-18196366 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 45

Conread position: 265-492
Cow position: chr22:40376345-40376583 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 174, 46

Conread position: 265-558
Cow position: chr22:40399763-40400045 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 266-552
Cow position: chr22:21407361-21407640 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 45

Conread position: 268-543
Cow position: chr22:17813796-17814056 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-454
Cow position: chr23:26941255-26941726 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 334

Conread position: 1-544
Cow position: chr23:7311148-7311706 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 169

Conread position: 1-552
Cow position: chr23:31584788-31585356 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position: chr23:28306331-28306905 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 2-448
Cow position: chr23:17404097-17404548 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 77

Conread position: 2-547
Cow position: chr23:1321909-1321357 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 329

Conread position: 2-547
Cow position: chr23:6720996-6720441 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 3-353
Cow position: chr23:16057179-16057547 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 128, 17

Conread position: 4-558
Cow position: chr23:31276983-31277548 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 32

Conread position: 22-455
Cow position: chr23:9393389-9392930 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 38-552
Cow position: chr23:10852366-10852893 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 298

Conread position: 39-520
Cow position: chr23:41538159-41538662 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 323
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 27

Conread position: 42-574
Cow position: chr23:13511052-13511596 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 293

Conread position: 131-574
Cow position: chr23:1745094-1745548 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 216

Conread position: 135-562
Cow position: chr23:4608979-4608530 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 208

Conread position: 138-442
Cow position: chr23:23885058-23885378 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 65

Conread position: 138-451
Cow position: chr23:39823094-39823409 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 23

Conread position: 139-574
Cow position: chr23:3716793-3717239 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 186

Conread position: 144-551
Cow position: chr23:40371173-40370758 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 154-552
Cow position: chr23:20980280-20980687 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 179

Conread position: 154-554
Cow position: chr23:18108147-18108553 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 264
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 215

Conread position: 165-547
Cow position: chr23:20704300-20703903 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 158

Conread position: 172-552
Cow position: chr23:3877515-3877125 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 155

Conread position: 181-550
Cow position: chr23:20001540-20001915 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 147

Conread position: 187-574
Cow position: chr23:9268056-9268453 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 199-550
Cow position: chr23:1670398-1670755 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 17

Conread position: 203-455
Cow position: chr23:9653033-9652770 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 7

Conread position: 203-552
Cow position: chr23:1430314-1429952 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 203-558
Cow position: chr23:1289804-1290141 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 211-468
Cow position: chr23:6245441-6245176 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 111

Conread position: 213-563
Cow position: chr23:18655381-18655739 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 214-547
Cow position: chr23:8910987-8911315 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 101

Conread position: 214-554
Cow position: chr23:39573798-39573448 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 105

Conread position: 259-450
Cow position: chr23:27523723-27523532 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 75

Conread position: 260-552
Cow position: chr23:11128789-11129076 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 53

Conread position: 260-552
Cow position: chr23:35926154-35926437 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 51

Conread position: 260-557
Cow position: chr23:497049-496753 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 53

Conread position: 260-563
Cow position: chr23:18797147-18796837 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 175, 51

Conread position: 260-563
Cow position: chr23:35937579-35937871 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 147, 49

Conread position: 260-574
Cow position: chr23:29441446-29441136 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 260-574
Cow position: chr23:39389820-39390128 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-438
Cow position: chr23:5420951-5420781 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 264-444
Cow position: chr23:36198806-36198979 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 264-558
Cow position: chr23:3745167-3745452 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 256, 111

Conread position: 264-573
Cow position: chr23:26986721-26986412 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Conread position: 275-558
Cow position: chr23:4579467-4579186 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 276-550
Cow position: chr23:32309253-32309520 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 1-453
Cow position: chr24:37387113-37386641 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 196

Conread position: 1-484
Cow position: chr24:18740790-18740290 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-484
Cow position: chr24:26794995-26795495 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-544
Cow position: chr24:13117219-13117771 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 40

Conread position: 1-565
Cow position: chr24:8754094-8754675 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-565
Cow position: chr24:18113034-18113616 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 332

Conread position: 1-574
Cow position: chr24:9549841-9550427 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 63

Conread position: 2-444
Cow position: chr24:28601460-28601023 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 10

Conread position: 2-531
Cow position: chr24:16646357-16645811 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 2-574
Cow position: chr24:6067763-6067181 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 3-307
Cow position: chr24:27127521-27127205 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 12

Conread position: 3-555
Cow position: chr24:29064388-29063827 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 147

Conread position: 3-563
Cow position: chr24:32608892-32609465 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 118

Conread position: 3-574
Cow position: chr24:27905687-27906272 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 185

Conread position: 4-441
Cow position: chr24:41063039-41063497 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 335

Conread position: 4-574
Cow position: chr24:7030905-7030317 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 389
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 169

Conread position: 15-552
Cow position: chr24:38814235-38814787 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 191

Conread position: 17-558
Cow position: chr24:39501010-39500461 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 13

Conread position: 42-435
Cow position: chr24:31815849-31816251 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 286

Conread position: 81-574
Cow position: chr24:6141622-6141126 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 92-574
Cow position: chr24:36555489-36554993 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 237

Conread position: 101-550
Cow position: chr24:6449893-6450328 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 220

Conread position: 125-532
Cow position: chr24:39913791-39914207 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 126

Conread position: 131-465
Cow position: chr24:17294998-17294647 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 131-547
Cow position: chr24:30484547-30484133 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 131-558
Cow position: chr24:32693091-32693524 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 197

Conread position: 131-558
Cow position: chr24:33622098-33621664 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 131-574
Cow position: chr24:5141339-5141778 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 52

Conread position: 138-552
Cow position: chr24:9366078-9365654 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 142-554
Cow position: chr24:32370522-32370092 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 154-532
Cow position: chr24:32070070-32070466 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 154-554
Cow position: chr24:24455133-24455551 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 275
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 100

Conread position: 160-551
Cow position: chr24:18742143-18741756 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 160-572
Cow position: chr24:40056306-40055888 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 170

Conread position: 184-552
Cow position: chr24:28303911-28303533 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 185-574
Cow position: chr24:28062387-28062786 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 192-544
Cow position: chr24:9070986-9070626 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 214-490
Cow position: chr24:16897375-16897087 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 125

Conread position: 214-574
Cow position: chr24:29596336-29595977 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 215-574
Cow position: chr24:7001597-7001230 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 107

Conread position: 218-433
Cow position: chr24:28290090-28289868 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 102

Conread position: 236-565
Cow position: chr24:20368389-20368721 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 248-563
Cow position: chr24:34870347-34870051 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 15

Conread position: 260-430
Cow position: chr24:30545355-30545185 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 260-450
Cow position: chr24:37984817-37984634 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 260-451
Cow position: chr24:18331215-18331405 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 53

Conread position: 260-452
Cow position: chr24:27889377-27889191 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 260-455
Cow position: chr24:23695394-23695206 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 260-551
Cow position: chr24:43506982-43506700 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position: chr24:36326218-36326504 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-558
Cow position: chr24:24002508-24002797 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 53

Conread position: 260-558
Cow position: chr24:38655566-38655270 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 56

Conread position: 260-560
Cow position: chr24:39441027-39440733 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 260-573
Cow position: chr24:27809709-27810019 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 53

Conread position: 260-574
Cow position: chr24:28336011-28335703 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 228, 53

Conread position: 264-455
Cow position: chr24:40184107-40184298 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 266-558
Cow position: chr24:33379591-33379877 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 275-574
Cow position: chr24:32405508-32405214 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 33

Conread position: 281-558
Cow position: chr24:38643181-38643457 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 44

Conread position: 1-408
Cow position: chr25:18237090-18237494 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 64

Conread position: 1-455
Cow position: chr25:35613061-35612592 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 80

Conread position: 1-552
Cow position: chr25:2135635-2136189 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 331

Conread position: 1-554
Cow position: chr25:15005476-15006043 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 211

Conread position: 1-555
Cow position: chr25:35446220-35446780 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 20

Conread position: 1-574
Cow position: chr25:17658850-17659422 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 27

Conread position: 1-574
Cow position: chr25:24654898-24654310 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 66

Conread position: 2-552
Cow position: chr25:17657889-17658451 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 222

Conread position: 2-554
Cow position: chr25:13332691-13333264 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 3-465
Cow position: chr25:18190101-18189622 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 329

Conread position: 9-552
Cow position: chr25:22197865-22198425 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 323

Conread position: 35-574
Cow position: chr25:36747133-36746586 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 290

Conread position: 42-554
Cow position: chr25:11437467-11436962 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 96

Conread position: 53-303
Cow position: chr25:18721746-18721489 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 6

Conread position: 67-552
Cow position: chr25:35649174-35649676 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 265

Conread position: 86-465
Cow position: chr25:2595354-2595740 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 118-451
Cow position: chr25:27510864-27510522 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 98, 7

Conread position: 131-463
Cow position: chr25:15453112-15452770 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-552
Cow position: chr25:20394604-20395039 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 131-565
Cow position: chr25:10896320-10895876 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 150-552
Cow position: chr25:33255814-33256206 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 54

Conread position: 154-574
Cow position: chr25:23829682-23829258 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 157-552
Cow position: chr25:14834228-14833818 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 166

Conread position: 160-574
Cow position: chr25:35347343-35347764 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 182-526
Cow position: chr25:21041279-21041633 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 187-562
Cow position: chr25:14648074-14647690 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 255
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 151

Conread position: 192-547
Cow position: chr25:24572539-24572907 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 192-552
Cow position: chr25:22730132-22730476 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 47

Conread position: 194-528
Cow position: chr25:598803-599149 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 143

Conread position: 194-550
Cow position: chr25:26111754-26112110 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 135

Conread position: 203-468
Cow position: chr25:40906794-40906522 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 7

Conread position: 214-554
Cow position: chr25:6892034-6891679 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 218-573
Cow position: chr25:3992286-3992649 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 115

Conread position: 260-403
Cow position: chr25:27521585-27521449 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 260-550
Cow position: chr25:14225250-14224960 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 217

Conread position: 260-552
Cow position: chr25:35339887-35340170 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-558
Cow position: chr25:16738389-16738099 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 264, 51

Conread position: 260-558
Cow position: chr25:33838940-33839231 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-558
Cow position: chr25:36779048-36779336 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 260-565
Cow position: chr25:18294763-18294464 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 51

Conread position: 260-574
Cow position: chr25:10011167-10010862 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-574
Cow position: chr25:21191041-21191347 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-555
Cow position: chr25:20060475-20060190 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 52

Conread position: 261-558
Cow position: chr25:13569620-13569323 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 264-542
Cow position: chr25:30817128-30817401 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 69

Conread position: 271-574
Cow position: chr25:1735753-1735456 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 275-433
Cow position: chr25:7328920-7329072 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 275-541
Cow position: chr25:787840-788094 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 275-542
Cow position: chr25:12171032-12171289 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 1-451
Cow position: chr26:8810386-8810850 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 1-544
Cow position: chr26:31138420-31137876 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 1-552
Cow position: chr26:23600503-23599935 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 334

Conread position: 1-565
Cow position: chr26:3230998-3231578 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 99

Conread position: 1-565
Cow position: chr26:8738885-8738304 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-569
Cow position: chr26:18918795-18918197 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 250

Conread position: 1-574
Cow position: chr26:22831507-22830919 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 333

Conread position: 3-514
Cow position: chr26:12965334-12964838 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 82

Conread position: 3-554
Cow position: chr26:12126039-12125445 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 3-558
Cow position: chr26:17327702-17328271 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 332

Conread position: 3-563
Cow position: chr26:24239226-24239819 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 337

Conread position: 8-560
Cow position: chr26:14395940-14395370 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 324

Conread position: 36-539
Cow position: chr26:13706661-13706155 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 44-574
Cow position: chr26:2676678-2676138 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 24

Conread position: 46-558
Cow position: chr26:21351047-21351549 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 145

Conread position: 52-552
Cow position: chr26:30754197-30754714 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 280

Conread position: 78-523
Cow position: chr26:8034222-8034685 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 257

Conread position: 131-558
Cow position: chr26:1106831-1107269 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 38

Conread position: 158-558
Cow position: chr26:30807058-30806649 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 160-555
Cow position: chr26:16720373-16720778 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 181-552
Cow position: chr26:6714808-6714426 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 146

Conread position: 204-552
Cow position: chr26:8053296-8053654 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 215-465
Cow position: chr26:20130568-20130307 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 27

Conread position: 260-410
Cow position: chr26:17056990-17057141 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 260-438
Cow position: chr26:21242414-21242592 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 260-451
Cow position: chr26:26249074-26249258 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 260-531
Cow position: chr26:33012096-33011827 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 53

Conread position: 260-552
Cow position: chr26:762354-762068 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr26:14209231-14209517 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-565
Cow position: chr26:16210444-16210743 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position: chr26:3757361-3757669 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 229, 51

Conread position: 260-574
Cow position: chr26:6448034-6447728 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 53

Conread position: 261-552
Cow position: chr26:12238463-12238187 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 65

Conread position: 264-539
Cow position: chr26:12145530-12145264 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 49

Conread position: 264-573
Cow position: chr26:31781525-31781822 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 266-574
Cow position: chr26:30724798-30724494 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 45

Conread position: 267-574
Cow position: chr26:32380881-32381180 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 46

Conread position: 269-558
Cow position: chr26:32933312-32933595 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 281-491
Cow position: chr26:35448670-35448879 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 1-317
Cow position: chr27:25112653-25112986 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 187

Conread position: 1-435
Cow position: chr27:11470020-11470468 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 13

Conread position: 1-484
Cow position: chr27:8201422-8201919 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 334

Conread position: 1-531
Cow position: chr27:26856527-26857072 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-549
Cow position: chr27:21283759-21283197 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 25

Conread position: 1-552
Cow position: chr27:16823477-16822930 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 49

Conread position: 1-552
Cow position: chr27:23893821-23894389 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-555
Cow position: chr27:19388703-19388131 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 175

Conread position: 1-558
Cow position: chr27:2331990-2332557 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 62

Conread position: 1-563
Cow position: chr27:16045216-16045796 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 332

Conread position: 2-555
Cow position: chr27:9254654-9254086 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 371
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 128, 51

Conread position: 2-574
Cow position: chr27:13409483-13410075 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 162

Conread position: 2-574
Cow position: chr27:22329979-22330570 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 180

Conread position: 3-528
Cow position: chr27:1636270-1636801 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 343

Conread position: 3-574
Cow position: chr27:16787511-16786921 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 52

Conread position: 29-574
Cow position: chr27:27063801-27064345 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 71

Conread position: 33-451
Cow position: chr27:22559727-22559295 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 297

Conread position: 40-552
Cow position: chr27:15868021-15867508 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 122

Conread position: 41-574
Cow position: chr27:19423863-19423298 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 308

Conread position: 74-573
Cow position: chr27:24999126-24999639 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 146

Conread position: 85-484
Cow position: chr27:20798984-20799398 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 10

Conread position: 92-573
Cow position: chr27:13317372-13317859 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 242

Conread position: 131-488
Cow position: chr27:26436156-26436517 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 197

Conread position: 131-563
Cow position: chr27:27930886-27931317 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 199

Conread position: 131-574
Cow position: chr27:15643910-15644363 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 138-539
Cow position: chr27:26998875-26999295 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 258

Conread position: 138-542
Cow position: chr27:26142334-26141917 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 184

Conread position: 138-574
Cow position: chr27:13876263-13875829 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 143-574
Cow position: chr27:2900707-2901143 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 183

Conread position: 146-574
Cow position: chr27:23128984-23128553 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 181

Conread position: 148-552
Cow position: chr27:23595788-23595389 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 162

Conread position: 154-565
Cow position: chr27:6074438-6074022 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 101

Conread position: 165-538
Cow position: chr27:17469370-17469753 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 43

Conread position: 166-555
Cow position: chr27:26223752-26224155 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 172-444
Cow position: chr27:24224086-24224361 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 114

Conread position: 188-552
Cow position: chr27:22107766-22108145 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 52

Conread position: 189-574
Cow position: chr27:23511608-23511216 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 138

Conread position: 215-574
Cow position: chr27:1173083-1173450 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 107

Conread position: 248-465
Cow position: chr27:21452208-21452422 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 10

Conread position: 260-440
Cow position: chr27:25277574-25277394 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 51

Conread position: 260-453
Cow position: chr27:26219337-26219148 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 185, 51

Conread position: 260-550
Cow position: chr27:26313799-26314079 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-555
Cow position: chr27:22440544-22440253 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 48

Conread position: 260-560
Cow position: chr27:15927174-15926880 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 260-574
Cow position: chr27:23454748-23455052 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 283, 56

Conread position: 261-552
Cow position: chr27:10992768-10992470 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 203, 47

Conread position: 261-563
Cow position: chr27:732964-732677 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 263-465
Cow position: chr27:26239642-26239448 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 275-455
Cow position: chr27:7648145-7648321 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 275-568
Cow position: chr27:26300228-26299943 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 170, 0

Conread position: 416-574
Cow position: chr27:31147421-31147576 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 1-445
Cow position: chr28:16371502-16371054 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 27

Conread position: 1-465
Cow position: chr28:7807459-7807939 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 322

Conread position: 1-552
Cow position: chr28:24603459-24604025 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 156

Conread position: 1-574
Cow position: chr28:34082737-34082154 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 2-455
Cow position: chr28:13865085-13865554 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 27

Conread position: 2-552
Cow position: chr28:25248653-25249200 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 305

Conread position: 2-562
Cow position: chr28:10530190-10529627 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 42

Conread position: 3-466
Cow position: chr28:31842403-31841922 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 3-474
Cow position: chr28:7981428-7980935 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 336

Conread position: 3-574
Cow position: chr28:22501197-22500616 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 337

Conread position: 5-511
Cow position: chr28:10589718-10589224 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 27

Conread position: 14-563
Cow position: chr28:3914008-3914566 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 163

Conread position: 15-552
Cow position: chr28:26923084-26922519 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 414

Conread position: 20-574
Cow position: chr28:11752857-11752277 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 213

Conread position: 31-565
Cow position: chr28:3627637-3628189 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 302

Conread position: 48-490
Cow position: chr28:6090488-6090944 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 169

Conread position: 58-552
Cow position: chr28:12998215-12998722 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 335
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 147

Conread position: 65-558
Cow position: chr28:11452134-11451616 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 268

Conread position: 80-550
Cow position: chr28:4535839-4536314 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 95-574
Cow position: chr28:16246879-16246402 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 148

Conread position: 131-535
Cow position: chr28:10900237-10900649 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 41

Conread position: 131-574
Cow position: chr28:9285949-9285510 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 198

Conread position: 138-555
Cow position: chr28:20124209-20124634 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 193

Conread position: 154-455
Cow position: chr28:1537123-1537430 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 7

Conread position: 155-562
Cow position: chr28:22308114-22308504 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 168-565
Cow position: chr28:23114831-23114424 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 194-558
Cow position: chr28:24686099-24686473 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 133

Conread position: 203-554
Cow position: chr28:21598761-21598406 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 214-554
Cow position: chr28:18717610-18717274 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 34

Conread position: 218-574
Cow position: chr28:11427031-11426678 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 108

Conread position: 248-560
Cow position: chr28:32729691-32729379 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 16

Conread position: 260-455
Cow position: chr28:32747475-32747666 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 53

Conread position: 260-478
Cow position: chr28:13290618-13290401 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 181, 51

Conread position: 260-521
Cow position: chr28:32174209-32174468 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 201, 0

Conread position: 260-526
Cow position: chr28:16388211-16388462 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 260-552
Cow position: chr28:10977424-10977712 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 49

Conread position: 260-552
Cow position: chr28:11585647-11585362 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-554
Cow position: chr28:21129563-21129278 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 217, 48

Conread position: 260-562
Cow position: chr28:22322824-22323121 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 260-574
Cow position: chr28:4058288-4058592 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 261-463
Cow position: chr28:3494063-3493869 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 264-506
Cow position: chr28:4139114-4138887 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 264-574
Cow position: chr28:5371344-5371044 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 44

Conread position: 264-574
Cow position: chr28:23254223-23253933 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 0

Conread position: 265-555
Cow position: chr28:22164533-22164819 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 0

Conread position: 266-456
Cow position: chr28:13447301-13447483 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 266-558
Cow position: chr28:23802223-23802507 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 42

Conread position: 268-438
Cow position: chr28:11818346-11818177 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 50

Conread position: 268-465
Cow position: chr28:9637332-9637141 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 276-552
Cow position: chr28:26103303-26103561 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 160, 0

Conread position: 276-565
Cow position: chr28:11527685-11527398 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 1-440
Cow position: chr29:27858082-27858540 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 214

Conread position: 1-455
Cow position: chr29:2624243-2623772 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 239

Conread position: 1-463
Cow position: chr29:16012471-16011995 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 106

Conread position: 1-466
Cow position: chr29:1743003-1743485 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-486
Cow position: chr29:19891069-19891564 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 1-552
Cow position: chr29:11119208-11118640 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr29:18011079-18011643 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 91

Conread position: 1-558
Cow position: chr29:14116318-14116887 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 43

Conread position: 1-563
Cow position: chr29:9332419-9332995 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 69

Conread position: 1-566
Cow position: chr29:38409701-38410282 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 19

Conread position: 1-573
Cow position: chr29:32962811-32963414 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 159

Conread position: 2-563
Cow position: chr29:649542-650124 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 2-574
Cow position: chr29:19761563-19762133 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 122

Conread position: 3-552
Cow position: chr29:32289894-32290441 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 185

Conread position: 3-563
Cow position: chr29:11136604-11136042 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 132

Conread position: 4-508
Cow position: chr29:32644185-32644708 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 169

Conread position: 5-554
Cow position: chr29:29056460-29057022 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 197

Conread position: 32-435
Cow position: chr29:984159-984586 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 314

Conread position: 32-565
Cow position: chr29:15251384-15251934 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 300

Conread position: 36-574
Cow position: chr29:686881-686335 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 15

Conread position: 44-563
Cow position: chr29:11695850-11696383 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 49-411
Cow position: chr29:31594746-31594371 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 47

Conread position: 56-574
Cow position: chr29:23988118-23988669 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 351
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 116

Conread position: 57-465
Cow position: chr29:35739171-35738752 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 14

Conread position: 87-558
Cow position: chr29:18084943-18085436 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 101-441
Cow position: chr29:3501769-3502122 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 44

Conread position: 131-486
Cow position: chr29:8681539-8681179 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 28

Conread position: 131-552
Cow position: chr29:21443938-21443505 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 198

Conread position: 133-552
Cow position: chr29:12898200-12898630 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 193

Conread position: 134-563
Cow position: chr29:24121420-24121009 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 65

Conread position: 138-532
Cow position: chr29:45006201-45005800 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 186

Conread position: 138-555
Cow position: chr29:1956675-1956247 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 196

Conread position: 142-539
Cow position: chr29:19428086-19428489 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 187

Conread position: 153-509
Cow position: chr29:18528308-18527937 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 188

Conread position: 154-437
Cow position: chr29:18012042-18012323 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 88

Conread position: 157-548
Cow position: chr29:457609-457212 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 171-547
Cow position: chr29:21592162-21592533 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 215-574
Cow position: chr29:1324933-1325298 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 111

Conread position: 220-565
Cow position: chr29:44233439-44233096 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 248-560
Cow position: chr29:28506631-28506928 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 67

Conread position: 259-573
Cow position: chr29:32308773-32308467 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 260-465
Cow position: chr29:42709222-42709023 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 260-558
Cow position: chr29:465846-465556 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 51

Conread position: 260-564
Cow position: chr29:43495623-43495910 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 260-566
Cow position: chr29:12901546-12901260 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 55

Conread position: 261-573
Cow position: chr29:42821340-42821643 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 216, 47

Conread position: 261-574
Cow position: chr29:24952235-24952545 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 65

Conread position: 264-438
Cow position: chr29:13848378-13848211 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 264-547
Cow position: chr29:10674572-10674846 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 267-461
Cow position: chr29:34298188-34298003 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 275-552
Cow position: chr29:18212425-18212143 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 91

Conread position: 294-554
Cow position: chr29:18963324-18963580 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 138, 0

Conread position: 1-314
Cow position: chr3:37982948-37982617 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 1-398
Cow position: chr3:70893992-70894400 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 329

Conread position: 1-445
Cow position: chr3:74391493-74391030 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 337

Conread position: 1-453
Cow position: chr3:4031165-4031633 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 335

Conread position: 1-464
Cow position: chr3:64024622-64024145 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 1-484
Cow position: chr3:12932184-12932684 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr3:2572945-2573513 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr3:26891908-26892476 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 333

Conread position: 1-552
Cow position: chr3:26920136-26920713 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 129

Conread position: 1-552
Cow position: chr3:77187697-77188259 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 335

Conread position: 1-555
Cow position: chr3:2537512-2538071 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 1-555
Cow position: chr3:45700083-45700653 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 28

Conread position: 1-558
Cow position: chr3:30567531-30568106 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-558
Cow position: chr3:38096318-38096892 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-563
Cow position: chr3:6689247-6689822 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 124

Conread position: 1-563
Cow position: chr3:23735854-23735275 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 1-565
Cow position: chr3:41018893-41018312 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-568
Cow position: chr3:5420623-5420033 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-574
Cow position: chr3:24638819-24639426 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 512

Conread position: 1-574
Cow position: chr3:34503718-34503131 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 43

Conread position: 1-574
Cow position: chr3:43528984-43528397 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 106

Conread position: 1-574
Cow position: chr3:64654086-64654642 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 40

Conread position: 2-466
Cow position: chr3:30908702-30908215 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 2-554
Cow position: chr3:42603075-42603650 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 174

Conread position: 2-555
Cow position: chr3:17864848-17865413 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 331

Conread position: 2-572
Cow position: chr3:72390337-72390917 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 240

Conread position: 2-574
Cow position: chr3:25690990-25691588 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 397
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 26

Conread position: 2-574
Cow position: chr3:51032596-51033181 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 173

Conread position: 3-433
Cow position: chr3:38863115-38863541 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 89

Conread position: 3-460
Cow position: chr3:73936782-73936300 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 3-538
Cow position: chr3:16114825-16115370 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 3-552
Cow position: chr3:75479280-75479828 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 3-552
Cow position: chr3:79094801-79094253 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 124

Conread position: 3-568
Cow position: chr3:76154987-76155542 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 7-463
Cow position: chr3:73459479-73459951 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 325

Conread position: 7-574
Cow position: chr3:23169811-23169231 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 30-450
Cow position: chr3:20390132-20389694 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 5

Conread position: 37-552
Cow position: chr3:14145127-14144595 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 295

Conread position: 43-552
Cow position: chr3:55110542-55110027 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 110

Conread position: 56-490
Cow position: chr3:29595673-29596122 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 281

Conread position: 72-552
Cow position: chr3:2674357-2674846 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 257

Conread position: 75-552
Cow position: chr3:28933395-28933889 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 257

Conread position: 79-552
Cow position: chr3:65236343-65236840 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 85-522
Cow position: chr3:58971236-58971674 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 311

Conread position: 97-574
Cow position: chr3:55272680-55272205 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 230

Conread position: 98-470
Cow position: chr3:73466939-73467323 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 89

Conread position: 114-562
Cow position: chr3:8900782-8901244 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 131-554
Cow position: chr3:37040847-37041246 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 131-574
Cow position: chr3:11333924-11333479 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 196

Conread position: 132-563
Cow position: chr3:2334676-2335110 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 22

Conread position: 135-552
Cow position: chr3:54959590-54960007 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 105

Conread position: 138-444
Cow position: chr3:29360771-29360454 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 192

Conread position: 138-554
Cow position: chr3:14626759-14626333 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 138-562
Cow position: chr3:15685507-15685089 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 183

Conread position: 138-574
Cow position: chr3:18886971-18887420 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 192

Conread position: 139-539
Cow position: chr3:50124094-50123707 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 7

Conread position: 141-574
Cow position: chr3:9842971-9843422 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 147-438
Cow position: chr3:39172097-39171801 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 31

Conread position: 154-552
Cow position: chr3:11254736-11254333 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 9

Conread position: 154-574
Cow position: chr3:174365-174768 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 102

Conread position: 154-574
Cow position: chr3:19711906-19711477 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 155-574
Cow position: chr3:36570631-36570211 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 169

Conread position: 175-574
Cow position: chr3:53903617-53904021 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 144

Conread position: 178-563
Cow position: chr3:22089847-22089455 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 181-510
Cow position: chr3:8591891-8591570 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 187-520
Cow position: chr3:17281560-17281220 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 125

Conread position: 192-574
Cow position: chr3:14552327-14552713 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 192-574
Cow position: chr3:77271830-77271428 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 203-565
Cow position: chr3:57022044-57022404 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 214-465
Cow position: chr3:75106922-75107173 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 104

Conread position: 215-552
Cow position: chr3:1760131-1760476 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 217-515
Cow position: chr3:49218834-49218528 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 220-574
Cow position: chr3:15058126-15057758 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 221-574
Cow position: chr3:82617862-82618226 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 227-555
Cow position: chr3:82460666-82461001 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 7

Conread position: 260-449
Cow position: chr3:2680071-2680253 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 260-451
Cow position: chr3:23876177-23876362 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 260-462
Cow position: chr3:8923295-8923490 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 260-464
Cow position: chr3:59208277-59208478 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 53

Conread position: 260-465
Cow position: chr3:62883504-62883709 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 62

Conread position: 260-465
Cow position: chr3:66903847-66903649 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 260-487
Cow position: chr3:38698072-38698293 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 260-538
Cow position: chr3:1831034-1830761 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 193, 53

Conread position: 260-547
Cow position: chr3:35299206-35299486 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-554
Cow position: chr3:36657242-36656951 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 51

Conread position: 260-558
Cow position: chr3:39065864-39066156 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr3:59648795-59649094 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 261-451
Cow position: chr3:64998355-64998539 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 261-558
Cow position: chr3:65968687-65968977 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 125

Conread position: 261-563
Cow position: chr3:17331300-17331596 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 262-552
Cow position: chr3:19109266-19109553 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 121

Conread position: 264-555
Cow position: chr3:8752992-8753285 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 70

Conread position: 264-558
Cow position: chr3:67929736-67929445 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 266-574
Cow position: chr3:16656930-16656642 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 268-547
Cow position: chr3:66374868-66375132 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-455
Cow position: chr4:43840758-43840288 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 257

Conread position: 1-543
Cow position: chr4:1499873-1499323 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 218

Conread position: 1-552
Cow position: chr4:10613984-10613406 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 111

Conread position: 1-552
Cow position: chr4:19026149-19025580 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr4:60579907-60579339 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position: chr4:54758036-54757476 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 320

Conread position: 1-565
Cow position: chr4:5441438-5440857 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 331

Conread position: 1-565
Cow position: chr4:6547466-6546886 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 330

Conread position: 1-565
Cow position: chr4:27337434-27338013 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 165

Conread position: 1-571
Cow position: chr4:34209318-34209877 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 58

Conread position: 1-572
Cow position: chr4:41097190-41097766 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 321

Conread position: 1-574
Cow position: chr4:24002698-24002115 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 213

Conread position: 1-574
Cow position: chr4:27539891-27540477 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 1-574
Cow position: chr4:48030081-48030670 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 120

Conread position: 1-574
Cow position: chr4:54170654-54171218 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 36

Conread position: 2-453
Cow position: chr4:2601429-2601894 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 15

Conread position: 2-453
Cow position: chr4:61625361-61624892 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 119

Conread position: 2-547
Cow position: chr4:23853465-23854033 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 427

Conread position: 2-547
Cow position: chr4:67600451-67599904 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 27

Conread position: 2-552
Cow position: chr4:50760855-50760287 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 66

Conread position: 2-558
Cow position: chr4:1436451-1435876 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 194

Conread position: 2-558
Cow position: chr4:11201092-11201656 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 49

Conread position: 3-307
Cow position: chr4:20091338-20091653 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 3-463
Cow position: chr4:3269035-3268563 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 3-574
Cow position: chr4:28613103-28613676 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 115

Conread position: 3-574
Cow position: chr4:34223158-34223743 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 219

Conread position: 4-412
Cow position: chr4:23847932-23847516 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 115

Conread position: 4-574
Cow position: chr4:11872625-11872057 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 91

Conread position: 5-574
Cow position: chr4:5610784-5610220 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 54

Conread position: 6-555
Cow position: chr4:30690021-30690560 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 158

Conread position: 8-551
Cow position: chr4:19502525-19501968 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 322

Conread position: 13-494
Cow position: chr4:49814719-49814239 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 26-555
Cow position: chr4:68362226-68362778 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 421

Conread position: 26-558
Cow position: chr4:18602965-18602420 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 160

Conread position: 32-551
Cow position: chr4:31136053-31136588 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 39-573
Cow position: chr4:49408785-49409319 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 23

Conread position: 41-543
Cow position: chr4:14353378-14352857 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 294

Conread position: 42-552
Cow position: chr4:19096625-19097124 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 134

Conread position: 42-565
Cow position: chr4:28456769-28456229 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 290

Conread position: 60-565
Cow position: chr4:13877519-13878037 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 64-307
Cow position: chr4:12914881-12915128 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 207

Conread position: 68-558
Cow position: chr4:37553713-37553205 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 267

Conread position: 95-526
Cow position: chr4:22366491-22366934 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 235

Conread position: 99-574
Cow position: chr4:22052094-22051619 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 45

Conread position: 131-476
Cow position: chr4:13374977-13375332 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 132-463
Cow position: chr4:19492923-19493264 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 135-554
Cow position: chr4:40576504-40576082 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 76

Conread position: 138-563
Cow position: chr4:51898410-51898847 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 22

Conread position: 141-455
Cow position: chr4:59106494-59106153 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 141-550
Cow position: chr4:17775175-17774763 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 141-554
Cow position: chr4:62000039-61999619 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 188

Conread position: 141-563
Cow position: chr4:36892760-36893197 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 196

Conread position: 142-552
Cow position: chr4:46709111-46708695 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 17

Conread position: 144-554
Cow position: chr4:19420743-19421166 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 196

Conread position: 147-547
Cow position: chr4:18255282-18255691 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 185

Conread position: 147-552
Cow position: chr4:13589513-13589923 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 182

Conread position: 149-547
Cow position: chr4:59870915-59871320 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 149-550
Cow position: chr4:30573877-30574286 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 67

Conread position: 154-530
Cow position: chr4:8413685-8413298 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 154-542
Cow position: chr4:54190532-54190917 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 174

Conread position: 154-547
Cow position: chr4:49794109-49794506 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 154-549
Cow position: chr4:41186945-41186537 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 178

Conread position: 157-455
Cow position: chr4:12128366-12128074 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 157

Conread position: 157-574
Cow position: chr4:19541551-19541981 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 170

Conread position: 169-465
Cow position: chr4:16092173-16091874 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 155

Conread position: 172-444
Cow position: chr4:66548347-66548059 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 160

Conread position: 173-574
Cow position: chr4:39009410-39009820 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 26

Conread position: 194-572
Cow position: chr4:51850664-51851050 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 57

Conread position: 205-563
Cow position: chr4:61898055-61897696 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 123

Conread position: 209-552
Cow position: chr4:26538104-26538455 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 215-574
Cow position: chr4:12464336-12464701 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 107

Conread position: 215-574
Cow position: chr4:13271650-13272003 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 95

Conread position: 222-574
Cow position: chr4:7429817-7430174 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 257-560
Cow position: chr4:9815806-9815511 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 56

Conread position: 260-480
Cow position: chr4:38934933-38935140 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 207, 41

Conread position: 260-539
Cow position: chr4:67392510-67392789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 184, 48

Conread position: 260-552
Cow position: chr4:27276996-27276708 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 49

Conread position: 260-552
Cow position: chr4:53999973-53999674 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 51

Conread position: 260-558
Cow position: chr4:351775-352067 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 260-558
Cow position: chr4:20328166-20327877 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 51

Conread position: 260-558
Cow position: chr4:47047288-47047583 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 53

Conread position: 260-563
Cow position: chr4:33090206-33089901 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 260-565
Cow position: chr4:22086433-22086134 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 0

Conread position: 260-569
Cow position: chr4:41301468-41301142 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 320

Conread position: 260-572
Cow position: chr4:41441112-41441418 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position: chr4:1404587-1404896 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 185, 51

Conread position: 264-463
Cow position: chr4:22861372-22861176 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 62

Conread position: 264-492
Cow position: chr4:34383797-34383586 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 264-563
Cow position: chr4:23526242-23526541 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 47

Conread position: 264-574
Cow position: chr4:15623387-15623699 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 149, 214

Conread position: 275-574
Cow position: chr4:22138672-22138381 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 443-574
Cow position: chr4:203424-203291 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-552
Cow position: chr5:5814777-5814209 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr5:29634752-29635320 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr5:44753000-44752445 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 222

Conread position: 1-552
Cow position: chr5:49103147-49103716 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 332

Conread position: 1-552
Cow position: chr5:68273526-68272958 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-555
Cow position: chr5:43984407-43984976 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 263

Conread position: 1-555
Cow position: chr5:54714443-54713868 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 37

Conread position: 1-563
Cow position: chr5:35207559-35208138 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-565
Cow position: chr5:37626169-37626750 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-574
Cow position: chr5:693876-694470 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 1-574
Cow position: chr5:14630613-14630020 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 336

Conread position: 1-574
Cow position: chr5:25231706-25231120 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 26

Conread position: 1-574
Cow position: chr5:26466926-26467507 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 73

Conread position: 1-574
Cow position: chr5:55631387-55631977 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-574
Cow position: chr5:58004547-58005131 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 2-513
Cow position: chr5:39243042-39242513 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 49

Conread position: 2-560
Cow position: chr5:21828155-21828738 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 334

Conread position: 2-562
Cow position: chr5:55943111-55942522 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 347

Conread position: 3-475
Cow position: chr5:15722987-15722506 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 25

Conread position: 3-545
Cow position: chr5:59782441-59781902 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 37

Conread position: 3-552
Cow position: chr5:29827354-29827919 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 89

Conread position: 3-558
Cow position: chr5:59082889-59082324 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 166

Conread position: 3-559
Cow position: chr5:72901853-72902431 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 17

Conread position: 3-573
Cow position: chr5:66256948-66257527 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 329

Conread position: 3-574
Cow position: chr5:63648168-63647589 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 166

Conread position: 22-552
Cow position: chr5:34464264-34463719 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 43

Conread position: 29-552
Cow position: chr5:35543010-35543550 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 303

Conread position: 29-554
Cow position: chr5:55757110-55756571 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 69

Conread position: 32-563
Cow position: chr5:26094828-26094293 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 42-562
Cow position: chr5:32393951-32394477 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 289

Conread position: 45-550
Cow position: chr5:44848672-44848155 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 291

Conread position: 47-565
Cow position: chr5:10299716-10300251 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 285

Conread position: 62-451
Cow position: chr5:26156595-26156203 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 40

Conread position: 66-550
Cow position: chr5:24348488-24348975 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 75-558
Cow position: chr5:51951726-51952229 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 339
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 25

Conread position: 84-513
Cow position: chr5:7922007-7921552 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 150

Conread position: 131-438
Cow position: chr5:63388183-63388500 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-545
Cow position: chr5:59779714-59779301 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 27

Conread position: 131-554
Cow position: chr5:62827308-62826886 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 54

Conread position: 131-570
Cow position: chr5:39298962-39299411 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 197

Conread position: 131-574
Cow position: chr5:54126522-54126963 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 29

Conread position: 138-462
Cow position: chr5:41363311-41362979 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 138-563
Cow position: chr5:37645508-37645950 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 139-487
Cow position: chr5:5193858-5194216 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 33

Conread position: 141-520
Cow position: chr5:38286540-38286936 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 70

Conread position: 150-442
Cow position: chr5:68871623-68871915 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 165

Conread position: 155-558
Cow position: chr5:20408202-20407795 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 170

Conread position: 157-552
Cow position: chr5:34638356-34638751 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 8

Conread position: 165-554
Cow position: chr5:58855577-58855971 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 47

Conread position: 166-562
Cow position: chr5:16894299-16893900 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 163

Conread position: 184-552
Cow position: chr5:26378178-26377801 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 203-554
Cow position: chr5:16184602-16184955 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 213-444
Cow position: chr5:42727272-42727034 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 112

Conread position: 214-552
Cow position: chr5:44660141-44660497 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 149

Conread position: 214-555
Cow position: chr5:38831470-38831124 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 117

Conread position: 214-555
Cow position: chr5:65593393-65593748 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 115

Conread position: 221-563
Cow position: chr5:67932942-67932588 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 41, 271

Conread position: 223-463
Cow position: chr5:5337674-5337426 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 104

Conread position: 240-552
Cow position: chr5:58441099-58441406 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 70

Conread position: 245-465
Cow position: chr5:62377955-62378167 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 60

Conread position: 248-451
Cow position: chr5:68846972-68846776 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 77

Conread position: 255-558
Cow position: chr5:36793605-36793908 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 182, 56

Conread position: 259-435
Cow position: chr5:45036358-45036533 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 260-489
Cow position: chr5:30977950-30978188 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 188

Conread position: 260-541
Cow position: chr5:75756198-75756479 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 195, 48

Conread position: 260-547
Cow position: chr5:33414825-33414548 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-552
Cow position: chr5:6129936-6130218 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position: chr5:10482792-10482506 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr5:54678979-54678693 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-554
Cow position: chr5:35144923-35145220 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 260-555
Cow position: chr5:26561725-26562022 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 183, 48

Conread position: 260-558
Cow position: chr5:65776817-65776514 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 189, 79

Conread position: 260-569
Cow position: chr5:58519820-58519523 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 49

Conread position: 260-574
Cow position: chr5:6528261-6528566 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 51

Conread position: 260-574
Cow position: chr5:14420765-14420457 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 260-574
Cow position: chr5:47756345-47756656 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 261-551
Cow position: chr5:63607986-63607697 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 52

Conread position: 261-574
Cow position: chr5:55068303-55068594 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 222, 52

Conread position: 264-436
Cow position: chr5:63456965-63456799 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 264-523
Cow position: chr5:50821372-50821625 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 264-552
Cow position: chr5:12672441-12672162 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 264-552
Cow position: chr5:17027677-17027960 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 49

Conread position: 264-558
Cow position: chr5:65887430-65887143 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 54

Conread position: 264-560
Cow position: chr5:26133490-26133200 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 264-563
Cow position: chr5:41604190-41604488 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 213, 52

Conread position: 409-573
Cow position: chr5:53964088-53963924 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 447-574
Cow position: chr5:32087960-32087833 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position: chr6:45065699-45065249 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 16

Conread position: 1-460
Cow position: chr6:6459571-6460047 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 348

Conread position: 1-468
Cow position: chr6:50571653-50572114 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 264

Conread position: 1-552
Cow position: chr6:41823375-41822807 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position: chr6:51733543-51734110 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 333

Conread position: 1-555
Cow position: chr6:60456140-60456714 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 25

Conread position: 1-565
Cow position: chr6:26667563-26666981 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 332

Conread position: 1-565
Cow position: chr6:61549265-61548684 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 332

Conread position: 1-574
Cow position: chr6:10695183-10695769 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 1-574
Cow position: chr6:20215934-20215344 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 2-450
Cow position: chr6:19044651-19045116 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 333

Conread position: 2-535
Cow position: chr6:59507669-59508214 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 108

Conread position: 2-550
Cow position: chr6:65862001-65862564 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 2-552
Cow position: chr6:28147589-28148131 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 86

Conread position: 2-574
Cow position: chr6:34075332-34075916 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 226

Conread position: 3-463
Cow position: chr6:47574252-47574727 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 81

Conread position: 3-552
Cow position: chr6:49411360-49410810 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 3-574
Cow position: chr6:13741013-13741593 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 84

Conread position: 4-554
Cow position: chr6:9733514-9732952 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 183

Conread position: 5-552
Cow position: chr6:27541027-27541591 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 327

Conread position: 10-573
Cow position: chr6:36918837-36918278 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 88

Conread position: 20-539
Cow position: chr6:17049858-17050388 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 23-435
Cow position: chr6:50114185-50114609 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 79

Conread position: 32-480
Cow position: chr6:4903302-4902847 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 32-550
Cow position: chr6:47340004-47339470 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 98

Conread position: 35-552
Cow position: chr6:33508952-33509461 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 102

Conread position: 36-441
Cow position: chr6:26914452-26914867 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 51-472
Cow position: chr6:42131464-42131016 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 115

Conread position: 53-558
Cow position: chr6:10332745-10332210 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 284

Conread position: 131-558
Cow position: chr6:46465283-46465714 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 138-554
Cow position: chr6:6068228-6067795 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 147-574
Cow position: chr6:10612322-10612763 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 288

Conread position: 152-561
Cow position: chr6:42106572-42106164 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 155-523
Cow position: chr6:38233481-38233834 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 36, 16

Conread position: 166-558
Cow position: chr6:17414963-17414566 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 178-552
Cow position: chr6:41470563-41470947 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 147

Conread position: 183-563
Cow position: chr6:52478942-52478536 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 197-532
Cow position: chr6:62015161-62015505 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 203-522
Cow position: chr6:58370091-58370427 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 7

Conread position: 203-574
Cow position: chr6:61575117-61575505 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 204-552
Cow position: chr6:55720840-55721198 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 209-552
Cow position: chr6:44098617-44098964 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 214-455
Cow position: chr6:47640966-47640714 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 117

Conread position: 214-484
Cow position: chr6:50755557-50755835 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 109

Conread position: 222-511
Cow position: chr6:18955491-18955194 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 100

Conread position: 259-552
Cow position: chr6:36652017-36652299 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 75

Conread position: 260-465
Cow position: chr6:3484662-3484463 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 260-479
Cow position: chr6:12648120-12648341 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 88

Conread position: 260-547
Cow position: chr6:31636100-31635810 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 58

Conread position: 260-550
Cow position: chr6:18049431-18049148 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-552
Cow position: chr6:6578180-6577894 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position: chr6:62925406-62925113 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 260-554
Cow position: chr6:52216161-52215873 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 178, 49

Conread position: 260-554
Cow position: chr6:52235652-52235364 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 178, 49

Conread position: 260-574
Cow position: chr6:10682336-10682649 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 260-574
Cow position: chr6:24327547-24327241 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 260-574
Cow position: chr6:49399023-49398716 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 260-574
Cow position: chr6:64097057-64096749 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 261-468
Cow position: chr6:19695137-19695338 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 261-548
Cow position: chr6:48169540-48169820 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 264-517
Cow position: chr6:35103724-35103483 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 264-532
Cow position: chr6:56651920-56651660 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 44

Conread position: 264-537
Cow position: chr6:60017671-60017934 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 255, 47

Conread position: 277-574
Cow position: chr6:17090198-17090497 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 155

Conread position: 281-551
Cow position: chr6:11789011-11789281 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 32

Conread position: 1-315
Cow position: chr7:13928819-13928490 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 1-412
Cow position: chr7:54186855-54186427 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-434
Cow position: chr7:26737998-26737553 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-438
Cow position: chr7:65819174-65818724 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 178

Conread position: 1-439
Cow position: chr7:19069248-19068795 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 331

Conread position: 1-471
Cow position: chr7:34082983-34083479 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 1-544
Cow position: chr7:26837966-26838534 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 223

Conread position: 1-554
Cow position: chr7:19466945-19466383 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 331

Conread position: 1-562
Cow position: chr7:56887459-56886891 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-572
Cow position: chr7:12659674-12659095 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 1-574
Cow position: chr7:3297125-3296535 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-574
Cow position: chr7:20779454-20780052 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 222

Conread position: 1-574
Cow position: chr7:23099723-23099138 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 67

Conread position: 1-574
Cow position: chr7:35110887-35111476 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 337

Conread position: 1-574
Cow position: chr7:59437783-59438371 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 256

Conread position: 2-455
Cow position: chr7:58866886-58867363 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 262

Conread position: 2-550
Cow position: chr7:42296750-42296189 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 328

Conread position: 2-574
Cow position: chr7:48666727-48667326 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 165

Conread position: 3-438
Cow position: chr7:40404822-40405272 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 330

Conread position: 3-464
Cow position: chr7:47045775-47046239 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 328

Conread position: 3-552
Cow position: chr7:29509297-29509836 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 126

Conread position: 3-552
Cow position: chr7:30115401-30114849 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 72

Conread position: 3-555
Cow position: chr7:21315439-21315994 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 19

Conread position: 3-574
Cow position: chr7:10427870-10427282 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 3-574
Cow position: chr7:32239948-32240533 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 176

Conread position: 3-574
Cow position: chr7:39325089-39325646 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 89

Conread position: 5-463
Cow position: chr7:47876465-47875987 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 41

Conread position: 6-574
Cow position: chr7:58302626-58302039 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 330

Conread position: 14-574
Cow position: chr7:36745640-36746223 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 322

Conread position: 16-552
Cow position: chr7:23276941-23276390 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 156

Conread position: 32-552
Cow position: chr7:19798587-19798050 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 304

Conread position: 37-554
Cow position: chr7:62602561-62603067 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 45

Conread position: 37-574
Cow position: chr7:1721617-1721069 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 147

Conread position: 49-542
Cow position: chr7:1943649-1944150 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 106

Conread position: 65-574
Cow position: chr7:46857576-46857056 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 269

Conread position: 87-494
Cow position: chr7:9929018-9928585 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 90-539
Cow position: chr7:53034915-53034444 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 246

Conread position: 92-465
Cow position: chr7:33280806-33280417 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 92-552
Cow position: chr7:43907621-43908089 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 84

Conread position: 131-451
Cow position: chr7:41444786-41445107 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 94

Conread position: 131-555
Cow position: chr7:18872667-18873098 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 193

Conread position: 131-558
Cow position: chr7:38400536-38400973 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 131-572
Cow position: chr7:15654621-15654174 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 108

Conread position: 133-565
Cow position: chr7:59877889-59878330 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 195

Conread position: 137-552
Cow position: chr7:26632354-26631929 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 138-307
Cow position: chr7:51872250-51872067 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 138-455
Cow position: chr7:45955362-45955694 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 138-523
Cow position: chr7:43940798-43941193 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 187

Conread position: 139-554
Cow position: chr7:53361921-53361494 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 190

Conread position: 139-555
Cow position: chr7:45098991-45099421 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 202

Conread position: 139-574
Cow position: chr7:21572747-21573186 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 193

Conread position: 139-574
Cow position: chr7:35778912-35779353 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 184

Conread position: 142-542
Cow position: chr7:51420722-51421132 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 183

Conread position: 147-532
Cow position: chr7:28427493-28427878 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 40

Conread position: 148-574
Cow position: chr7:26011881-26012328 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 283

Conread position: 154-552
Cow position: chr7:48243151-48243556 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 157-536
Cow position: chr7:29121258-29121650 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 178

Conread position: 160-518
Cow position: chr7:53772826-53772466 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 174

Conread position: 161-550
Cow position: chr7:39903591-39903980 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 162

Conread position: 162-552
Cow position: chr7:13645879-13645472 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 165

Conread position: 169-565
Cow position: chr7:5283569-5283975 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 156

Conread position: 172-574
Cow position: chr7:31171455-31171048 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 155

Conread position: 174-574
Cow position: chr7:25414892-25415299 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 176-521
Cow position: chr7:11783922-11783568 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 184-574
Cow position: chr7:32894748-32894346 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 203-493
Cow position: chr7:55085506-55085212 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 203-513
Cow position: chr7:68772973-68772652 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 7

Conread position: 203-532
Cow position: chr7:10760333-10759997 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 211-553
Cow position: chr7:39498488-39498136 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 278

Conread position: 214-459
Cow position: chr7:4840377-4840625 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 109

Conread position: 214-562
Cow position: chr7:14631912-14632269 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 112

Conread position: 214-573
Cow position: chr7:68050650-68051001 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 108

Conread position: 214-574
Cow position: chr7:23206097-23205726 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 215-451
Cow position: chr7:29302847-29302604 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 109

Conread position: 260-443
Cow position: chr7:42894008-42894191 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 260-520
Cow position: chr7:38901729-38901985 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 217, 49

Conread position: 260-552
Cow position: chr7:18388800-18388516 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 49

Conread position: 260-554
Cow position: chr7:37568625-37568914 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 53

Conread position: 260-554
Cow position: chr7:49942816-49942542 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 260-558
Cow position: chr7:23646204-23646491 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-558
Cow position: chr7:46117053-46116763 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 53

Conread position: 260-562
Cow position: chr7:47775468-47775758 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-563
Cow position: chr7:49820985-49820696 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 260-565
Cow position: chr7:41328424-41328143 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 43, 58

Conread position: 260-569
Cow position: chr7:23619488-23619187 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 261-574
Cow position: chr7:23818533-23818835 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 264-574
Cow position: chr7:36569463-36569750 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 87, 49

Conread position: 275-547
Cow position: chr7:44039106-44039369 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 277-574
Cow position: chr7:3728701-3728991 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 298-554
Cow position: chr7:2172385-2172641 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1-441
Cow position: chr8:36858861-36858396 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 344

Conread position: 1-451
Cow position: chr8:38043396-38042924 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 335

Conread position: 1-465
Cow position: chr8:11118220-11117739 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 210

Conread position: 1-471
Cow position: chr8:53838669-53839152 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 330

Conread position: 1-523
Cow position: chr8:27152690-27152161 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 12

Conread position: 1-552
Cow position: chr8:33045265-33044697 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-574
Cow position: chr8:10739838-10739257 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 253

Conread position: 1-574
Cow position: chr8:32966858-32967447 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 1-574
Cow position: chr8:33407550-33406975 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 183

Conread position: 2-574
Cow position: chr8:28884085-28884699 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 339

Conread position: 2-574
Cow position: chr8:46480575-46479996 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 332

Conread position: 3-455
Cow position: chr8:24868482-24868020 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 172

Conread position: 3-468
Cow position: chr8:8914462-8914945 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 35

Conread position: 3-558
Cow position: chr8:33993454-33994019 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 4-560
Cow position: chr8:15973191-15972627 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 43

Conread position: 4-574
Cow position: chr8:53320259-53320849 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 31

Conread position: 5-574
Cow position: chr8:12094074-12094665 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 381
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 337

Conread position: 5-574
Cow position: chr8:48955200-48955785 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 6-552
Cow position: chr8:51702300-51702853 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 153

Conread position: 7-560
Cow position: chr8:21224784-21224210 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 321

Conread position: 12-562
Cow position: chr8:28987017-28987565 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 408

Conread position: 26-551
Cow position: chr8:56424245-56423728 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 333
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 104, 122

Conread position: 32-552
Cow position: chr8:11605641-11606185 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 316

Conread position: 42-552
Cow position: chr8:16414040-16414547 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 279

Conread position: 51-550
Cow position: chr8:3446742-3446235 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 283

Conread position: 51-552
Cow position: chr8:1472385-1472912 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 41

Conread position: 75-574
Cow position: chr8:13975243-13975766 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 351
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 94

Conread position: 130-574
Cow position: chr8:36649030-36648588 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 199

Conread position: 131-464
Cow position: chr8:28669803-28670145 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 30

Conread position: 131-552
Cow position: chr8:1303331-1303756 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 131-552
Cow position: chr8:24372290-24371865 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 204

Conread position: 138-574
Cow position: chr8:47861504-47861066 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 52

Conread position: 139-554
Cow position: chr8:50708476-50708901 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 188

Conread position: 140-442
Cow position: chr8:20080663-20080351 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 187

Conread position: 146-574
Cow position: chr8:19996285-19995857 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 150-460
Cow position: chr8:37391966-37391647 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 182

Conread position: 154-435
Cow position: chr8:27600736-27601025 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 171

Conread position: 154-544
Cow position: chr8:16939007-16938606 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 171

Conread position: 162-552
Cow position: chr8:28321426-28321827 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 165

Conread position: 164-574
Cow position: chr8:19998630-19998211 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 163

Conread position: 165-441
Cow position: chr8:34400366-34400650 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 157

Conread position: 166-563
Cow position: chr8:21206342-21206739 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 161

Conread position: 166-574
Cow position: chr8:54051769-54052178 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 158

Conread position: 169-574
Cow position: chr8:28379322-28378911 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 175-555
Cow position: chr8:10337564-10337174 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 152

Conread position: 185-453
Cow position: chr8:17180606-17180333 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 142

Conread position: 203-573
Cow position: chr8:55726769-55726402 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 214-532
Cow position: chr8:57042614-57042286 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 105

Conread position: 214-559
Cow position: chr8:39807430-39807088 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 218-554
Cow position: chr8:36398406-36398063 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 105

Conread position: 221-574
Cow position: chr8:3891927-3891553 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 134

Conread position: 260-435
Cow position: chr8:19368093-19367924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 260-443
Cow position: chr8:53787827-53788004 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 260-444
Cow position: chr8:42794784-42794607 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 260-491
Cow position: chr8:39592066-39592280 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 217, 53

Conread position: 260-539
Cow position: chr8:52230143-52229872 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-547
Cow position: chr8:5877091-5877371 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 260-552
Cow position: chr8:26650871-26651154 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position: chr8:53965180-53964889 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 162, 49

Conread position: 260-562
Cow position: chr8:38893572-38893868 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 49

Conread position: 260-563
Cow position: chr8:672918-673211 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-565
Cow position: chr8:21154247-21153948 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 260-574
Cow position: chr8:18730003-18730309 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 260-574
Cow position: chr8:24980257-24980568 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 51

Conread position: 260-574
Cow position: chr8:25387524-25387835 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 53

Conread position: 260-574
Cow position: chr8:32621430-32621123 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 51

Conread position: 261-443
Cow position: chr8:18830950-18831125 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 262-550
Cow position: chr8:46952099-46952376 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 264-554
Cow position: chr8:28120287-28119997 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 190, 174

Conread position: 264-572
Cow position: chr8:14947738-14947435 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 49

Conread position: 283-558
Cow position: chr8:11078450-11078727 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 1-465
Cow position: chr9:23540692-23541170 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-488
Cow position: chr9:34900871-34901353 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 1-544
Cow position: chr9:44920659-44921209 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 1-552
Cow position: chr9:36025714-36025146 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-555
Cow position: chr9:19155894-19155326 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 332

Conread position: 1-558
Cow position: chr9:52753830-52753258 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 333

Conread position: 1-565
Cow position: chr9:217723-217138 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 116

Conread position: 1-565
Cow position: chr9:13620606-13620025 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-565
Cow position: chr9:47171444-47172028 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-574
Cow position: chr9:1519972-1520563 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 333

Conread position: 1-574
Cow position: chr9:1991163-1990570 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 332

Conread position: 1-574
Cow position: chr9:14003367-14003956 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 331

Conread position: 1-574
Cow position: chr9:15805169-15805754 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 193

Conread position: 1-574
Cow position: chr9:22361769-22361182 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 37

Conread position: 1-574
Cow position: chr9:22656189-22656779 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 2-480
Cow position: chr9:48774083-48773585 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 2-539
Cow position: chr9:20901382-20901926 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 158

Conread position: 2-565
Cow position: chr9:2715690-2715115 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 60

Conread position: 2-574
Cow position: chr9:13181301-13181888 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 327

Conread position: 3-552
Cow position: chr9:37017634-37017073 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 67

Conread position: 3-562
Cow position: chr9:1856030-1855459 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 73

Conread position: 3-572
Cow position: chr9:20393372-20393957 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 4-562
Cow position: chr9:34696541-34697116 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 40

Conread position: 4-565
Cow position: chr9:6886972-6887552 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 328

Conread position: 5-557
Cow position: chr9:21459409-21459974 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 329

Conread position: 45-565
Cow position: chr9:26518121-26518660 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 287

Conread position: 46-543
Cow position: chr9:26115141-26115649 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 114

Conread position: 48-555
Cow position: chr9:5161363-5161880 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 158

Conread position: 48-574
Cow position: chr9:9723178-9723713 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 131

Conread position: 52-574
Cow position: chr9:20407330-20406805 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 40

Conread position: 64-511
Cow position: chr9:35129518-35129053 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 270

Conread position: 69-421
Cow position: chr9:41958340-41957986 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 152

Conread position: 69-435
Cow position: chr9:9822566-9822943 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 62, 179

Conread position: 73-508
Cow position: chr9:56531540-56531094 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 259

Conread position: 73-552
Cow position: chr9:56530091-56529595 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 259

Conread position: 81-558
Cow position: chr9:31076994-31077495 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 262

Conread position: 85-468
Cow position: chr9:51621381-51620974 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 264

Conread position: 85-539
Cow position: chr9:7634929-7634469 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 79

Conread position: 88-565
Cow position: chr9:35304224-35304718 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 244

Conread position: 92-574
Cow position: chr9:15982416-15982911 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 242

Conread position: 100-555
Cow position: chr9:32236917-32236446 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 233

Conread position: 130-552
Cow position: chr9:53603031-53602602 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 38

Conread position: 131-552
Cow position: chr9:6089723-6089287 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 131-552
Cow position: chr9:23388057-23388489 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 200

Conread position: 131-552
Cow position: chr9:27994330-27993899 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-552
Cow position: chr9:61023195-61022797 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 85

Conread position: 131-572
Cow position: chr9:6880367-6879939 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 85

Conread position: 133-451
Cow position: chr9:8338660-8338340 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 75

Conread position: 138-528
Cow position: chr9:41932690-41932283 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 190

Conread position: 139-574
Cow position: chr9:18252320-18252756 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 21

Conread position: 143-573
Cow position: chr9:20816448-20816017 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 148-552
Cow position: chr9:24726076-24726489 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 179

Conread position: 150-574
Cow position: chr9:2717860-2718291 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 73

Conread position: 154-480
Cow position: chr9:51692051-51691714 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 167

Conread position: 155-429
Cow position: chr9:33067813-33067529 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 172

Conread position: 160-563
Cow position: chr9:22617208-22616801 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 169-552
Cow position: chr9:28244935-28244542 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 156

Conread position: 169-552
Cow position: chr9:28293112-28292719 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 156

Conread position: 172-438
Cow position: chr9:10143854-10144131 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 156

Conread position: 181-558
Cow position: chr9:32265831-32266204 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 186-427
Cow position: chr9:58133403-58133658 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 154

Conread position: 192-574
Cow position: chr9:28746970-28747354 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 203-518
Cow position: chr9:44500299-44500616 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 57, 7

Conread position: 203-544
Cow position: chr9:45284998-45285334 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 123

Conread position: 214-552
Cow position: chr9:29007102-29006750 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 214-555
Cow position: chr9:38183943-38184292 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 215-554
Cow position: chr9:7410313-7409969 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 115

Conread position: 217-552
Cow position: chr9:28948391-28948041 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 257-453
Cow position: chr9:8724305-8724106 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 260-444
Cow position: chr9:55983256-55983433 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 260-455
Cow position: chr9:35305608-35305801 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 177, 0

Conread position: 260-457
Cow position: chr9:34918808-34919000 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 51

Conread position: 260-484
Cow position: chr9:32071104-32070886 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 260-544
Cow position: chr9:18008392-18008670 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 260-547
Cow position: chr9:41789771-41789473 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 112, 51

Conread position: 260-547
Cow position: chr9:57950837-57951135 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 156

Conread position: 260-558
Cow position: chr9:37069069-37069386 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 260-570
Cow position: chr9:62360754-62361058 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 260-572
Cow position: chr9:10308536-10308840 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 58

Conread position: 260-572
Cow position: chr9:56031860-56032156 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-573
Cow position: chr9:8937624-8937316 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 51

Conread position: 260-574
Cow position: chr9:31124448-31124756 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 51

Conread position: 260-574
Cow position: chr9:35375896-35375595 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 261-442
Cow position: chr9:10876610-10876789 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 50

Conread position: 261-552
Cow position: chr9:5246320-5246038 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 264-490
Cow position: chr9:4126516-4126299 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 264-552
Cow position: chr9:38032658-38032961 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 284-574
Cow position: chr9:214006-214297 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 32

Conread position: 1-455
Cow position: chrX:9854577-9855050 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 43

Conread position: 1-455
Cow position: chrX:9953416-9953891 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 48

Conread position: 1-457
Cow position: chrX:17663620-17663140 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 1-458
Cow position: chrX:30824947-30825421 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-509
Cow position: chrX:6406650-6407163 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 16

Conread position: 1-552
Cow position: chrX:10923272-10922704 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position: chrX:23280308-23280879 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 331

Conread position: 1-562
Cow position: chrX:41879631-41879057 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-565
Cow position: chrX:36535436-36534855 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 331

Conread position: 2-441
Cow position: chrX:35847527-35847971 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 11

Conread position: 2-463
Cow position: chrX:4751072-4750601 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 2-487
Cow position: chrX:17891847-17892345 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 60

Conread position: 2-552
Cow position: chrX:4633556-4632985 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 217

Conread position: 2-552
Cow position: chrX:10866570-10865999 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 335

Conread position: 2-552
Cow position: chrX:11083304-11082747 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 2-565
Cow position: chrX:29049283-29049846 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 2-574
Cow position: chrX:12290038-12290625 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 165

Conread position: 2-574
Cow position: chrX:12310085-12309500 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 110

Conread position: 2-574
Cow position: chrX:31261334-31260741 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 334

Conread position: 3-491
Cow position: chrX:38852460-38852962 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 3-494
Cow position: chrX:10256839-10256335 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 95

Conread position: 3-574
Cow position: chrX:35388607-35388017 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 155

Conread position: 4-554
Cow position: chrX:45413349-45412786 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 327

Conread position: 6-552
Cow position: chrX:30965405-30965968 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 326

Conread position: 7-444
Cow position: chrX:44961028-44961472 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 60

Conread position: 19-435
Cow position: chrX:25816936-25816505 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 34-544
Cow position: chrX:41122404-41122929 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 77

Conread position: 45-550
Cow position: chrX:17497439-17497961 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 291

Conread position: 46-455
Cow position: chrX:7512836-7513260 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 202

Conread position: 47-436
Cow position: chrX:33493075-33493483 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 291

Conread position: 47-554
Cow position: chrX:12249140-12249672 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 205

Conread position: 48-554
Cow position: chrX:35268242-35268756 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 121

Conread position: 53-433
Cow position: chrX:21662455-21662843 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 102

Conread position: 66-565
Cow position: chrX:879000-878493 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 106

Conread position: 66-574
Cow position: chrX:47144440-47144980 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 359
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 265

Conread position: 69-574
Cow position: chrX:32871419-32870898 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 265

Conread position: 80-562
Cow position: chrX:39546599-39546097 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 87-443
Cow position: chrX:16324859-16324489 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 129, 57

Conread position: 89-565
Cow position: chrX:7571290-7571786 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 247

Conread position: 111-552
Cow position: chrX:20098731-20099189 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 131-552
Cow position: chrX:35409110-35409526 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 190

Conread position: 131-565
Cow position: chrX:10351297-10351741 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-574
Cow position: chrX:38438924-38439363 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 182

Conread position: 132-574
Cow position: chrX:14884525-14884073 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 193

Conread position: 134-554
Cow position: chrX:38963552-38963975 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 194

Conread position: 134-574
Cow position: chrX:28024702-28025150 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 191

Conread position: 138-565
Cow position: chrX:19022866-19022429 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 139-450
Cow position: chrX:6695904-6695580 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 23

Conread position: 152-552
Cow position: chrX:2664466-2664876 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 173

Conread position: 154-455
Cow position: chrX:41067295-41067609 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 18

Conread position: 154-550
Cow position: chrX:20504221-20504627 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 249

Conread position: 154-555
Cow position: chrX:32144703-32144293 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 102

Conread position: 156-444
Cow position: chrX:20675567-20675859 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 7, 160

Conread position: 157-452
Cow position: chrX:3596605-3596300 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 168

Conread position: 166-574
Cow position: chrX:20340418-20340003 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 170-574
Cow position: chrX:9651571-9651157 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 175-543
Cow position: chrX:42470456-42470079 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 178-555
Cow position: chrX:3154776-3154377 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 158

Conread position: 192-550
Cow position: chrX:2351559-2351927 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 194-455
Cow position: chrX:31745998-31745727 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 135

Conread position: 195-480
Cow position: chrX:12691159-12690864 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 131

Conread position: 200-560
Cow position: chrX:21862165-21861795 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 214-443
Cow position: chrX:13030120-13029883 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 109

Conread position: 214-540
Cow position: chrX:11455546-11455199 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 116

Conread position: 215-550
Cow position: chrX:18695403-18695055 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 260-453
Cow position: chrX:27679932-27680127 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 176

Conread position: 260-513
Cow position: chrX:13785797-13785544 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 183, 51

Conread position: 260-517
Cow position: chrX:47654885-47655132 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 260-547
Cow position: chrX:10916329-10916615 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 260-552
Cow position: chrX:28847301-28847012 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 260-558
Cow position: chrX:23564216-23563924 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-560
Cow position: chrX:15486044-15485752 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 51

Conread position: 260-563
Cow position: chrX:1616476-1616170 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 260-565
Cow position: chrX:11663759-11664058 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position: chrX:14599117-14599418 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 171, 51

Conread position: 260-574
Cow position: chrX:34754611-34754303 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 264-481
Cow position: chrX:25966634-25966852 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 177

Conread position: 264-515
Cow position: chrX:42221984-42221742 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 48

Conread position: 264-554
Cow position: chrX:1518860-1518570 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 264-554
Cow position: chrX:11581522-11581807 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 47

Conread position: 264-555
Cow position: chrX:48370680-48370967 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 52

Conread position: 275-558
Cow position: chrX:48224592-48224313 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 290-574
Cow position: chrX:25946231-25945948 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 21

Conread position: 294-547
Cow position: chrX:2300540-2300795 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 24