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Cow genome map

           
Conread name:
           
rfce15c_d5.y1
        

               
Conread position:
               
6-264
               

               
Cow position:
               
chr1:55705272-55705019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr1:54206839-54206573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
223, 64
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr1:79146840-79146614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 14
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr1:23998958-23998695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr1:56618673-56618444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr1:1981136-1980879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 193
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr1:58754816-58754605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr1:41027057-41027264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr1:12464682-12464472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr1:71078978-71078765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr1:42887295-42887074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr1:61884895-61885121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 132
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr1:78857347-78857116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
153, 183
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr1:81569046-81568819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr1:102529875-102529643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr1:81481400-81481173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr1:55753233-55753002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr1:84811957-84811724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr1:54267955-54267719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr1:81290489-81290728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr1:87197802-87198054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
200, 133
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr1:86682578-86682335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr1:89448883-89449091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 129
               

               
Conread position:
               
16-256
               

               
Cow position:
               
chr1:41056661-41056896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 148
               

               
Conread position:
               
17-246
               

               
Cow position:
               
chr1:68855149-68855376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr1:43505513-43505735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr1:79003960-79004202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
17-261
               

               
Cow position:
               
chr1:45315652-45315409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
151, 131
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr1:20104252-20104475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
20-272
               

               
Cow position:
               
chr1:24133073-24132827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
218, 58
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr1:41138142-41137918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
42-244
               

               
Cow position:
               
chr1:55685969-55685770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
42-264
               

               
Cow position:
               
chr1:71946075-71945854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 165
               

               
Conread position:
               
42-268
               

               
Cow position:
               
chr1:70483325-70483105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr1:102730747-102730532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
106, 156
               

               
Conread position:
               
88-266
               

               
Cow position:
               
chr1:64811290-64811467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr10:35245999-35245766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 99
               

               
Conread position:
               
11-246
               

               
Cow position:
               
chr10:33665791-33666026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
223, 148
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr10:10148601-10148813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
15-178
               

               
Cow position:
               
chr10:35778948-35778788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr10:5151299-5151513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 77
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr10:6384483-6384688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr10:30352803-30353013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr10:37426181-37425975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr10:56828364-56828157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr10:52695774-52695555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr10:17149832-17150049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
216, 135
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr10:9576096-9575870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr10:20095713-20095946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 157
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr10:38995181-38995414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr10:46327643-46327869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr10:31027691-31027459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr10:34655158-34654929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 152
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr10:60697671-60697449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr10:1978719-1978482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr10:61509991-61509757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr10:14947214-14947444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr10:6489824-6490069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 135
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr10:23311075-23310831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr10:19191712-19191950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr10:23346350-23346109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr10:24756364-24756611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
242, 133
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr10:49634020-49634235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr10:49923420-49923158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 190
               

               
Conread position:
               
17-258
               

               
Cow position:
               
chr10:43586330-43586088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
206, 122
               

               
Conread position:
               
18-229
               

               
Cow position:
               
chr10:22390552-22390759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr10:2857006-2857210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
200, 5
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr10:19679077-19679269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 164
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr11:17036573-17036361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr11:1625269-1625031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
137, 115
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr11:46922931-46922697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 138
               

               
Conread position:
               
11-250
               

               
Cow position:
               
chr11:21885787-21886022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr11:39060647-39060403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-173
               

               
Cow position:
               
chr11:16342270-16342111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr11:80564252-80564468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 118
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr11:29960257-29960473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr11:20238635-20238863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr11:30830655-30830435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr11:80556182-80556423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
223, 18
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr11:2917627-2917391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr11:44031964-44032208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
16-200
               

               
Cow position:
               
chr11:34121158-34121341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
16-202
               

               
Cow position:
               
chr11:45646633-45646448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
16-214
               

               
Cow position:
               
chr11:11558131-11558327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr11:39499316-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr11:18851868-18852090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-256
               

               
Cow position:
               
chr11:62812990-62812758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-272
               

               
Cow position:
               
chr11:52380912-52380657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
222, 151
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr11:77319377-77319583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr11:62620340-62620547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
20-268
               

               
Cow position:
               
chr11:34646553-34646805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 185
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr12:18518606-18518842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr12:19261133-19261340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr12:12232821-12233066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr12:18123607-18123848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr12:36261627-36261881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
133, 188
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr12:15089454-15089722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
271, 81
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr12:9143327-9143533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
16-258
               

               
Cow position:
               
chr12:25561309-25561544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr12:9766938-9766694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr12:45820424-45820271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr12:17269744-17269945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
26-249
               

               
Cow position:
               
chr12:5554385-5554168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
33-259
               

               
Cow position:
               
chr12:14986705-14986924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
82-276
               

               
Cow position:
               
chr12:2964052-2964237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr13:15257350-15257567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 82
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr13:20784609-20784358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
243, 145
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr13:23667270-23667020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
226, 10
               

               
Conread position:
               
6-173
               

               
Cow position:
               
chr13:23856228-23856063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr13:21288067-21288323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
232, 161
               

               
Conread position:
               
8-224
               

               
Cow position:
               
chr13:15288909-15289115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr13:971885-972088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr13:23479040-23478853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 134
               

               
Conread position:
               
14-482
               

               
Cow position:
               
chr13:11821163-11820717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr13:20666380-20666561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr13:20314613-20314826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
187, 135
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr13:35557102-35557312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr13:52057566-52057342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
188, 133
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr13:55674199-55674424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr13:13320806-13320577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr13:25817535-25817309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr13:41806781-41806558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-253
               

               
Cow position:
               
chr13:17292127-17292354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
234, 50
               

               
Conread position:
               
15-253
               

               
Cow position:
               
chr13:54389012-54389251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 129
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr13:55494517-55494748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr13:18058241-18058476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr13:54582881-54582643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr13:45439531-45439298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
15-271
               

               
Cow position:
               
chr13:43480066-43479820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr13:21135892-21136158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr13:20473673-20473938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
219, 139
               

               
Conread position:
               
15-410
               

               
Cow position:
               
chr13:14063512-14063905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
216, 152
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr13:20217390-20217599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chr13:54702194-54701948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr13:38329624-38329377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 132
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr13:18197602-18197831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
217, 26
               

               
Conread position:
               
18-228
               

               
Cow position:
               
chr13:19022277-19022064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 187
               

               
Conread position:
               
20-254
               

               
Cow position:
               
chr13:46329602-46329831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
211, 130
               

               
Conread position:
               
23-244
               

               
Cow position:
               
chr13:8450331-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr13:53850811-53850580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
38-245
               

               
Cow position:
               
chr13:33854698-33854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr14:1646113-1646325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr14:43868380-43868144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 88
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr14:3949034-3949295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
156, 112
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr14:16760465-16760254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr14:33791254-33791048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr14:13846051-13845826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
211, 118
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr14:20640564-20640793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
15-255
               

               
Cow position:
               
chr14:41749694-41749928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
223, 26
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr14:18345666-18345898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
16-262
               

               
Cow position:
               
chr14:4848412-4848172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
16-263
               

               
Cow position:
               
chr14:18302026-18301780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 196
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chr14:24945427-24945616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr14:48838659-48838416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 215
               

               
Conread position:
               
17-261
               

               
Cow position:
               
chr14:11577132-11576895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
17-276
               

               
Cow position:
               
chr14:20826554-20826301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr14:29734303-29734541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
10-258
               

               
Cow position:
               
chr15:14988106-14987865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
224, 5
               

               
Conread position:
               
14-161
               

               
Cow position:
               
chr15:16307536-16307390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr15:33643203-33643004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
15-219
               

               
Cow position:
               
chr15:24982065-24982267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr15:24994400-24994609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr15:8354154-8353942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr15:53716547-53716326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
153, 124
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr15:17763017-17762783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr15:36353781-36353537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr15:26442327-26442079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr15:36952093-36952316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr15:36887946-36887722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
18-248
               

               
Cow position:
               
chr15:50333090-50332859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
18-258
               

               
Cow position:
               
chr15:30470862-30471102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 188
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr15:34223957-34223795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 111
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr16:12324422-12324670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 111
               

               
Conread position:
               
10-295
               

               
Cow position:
               
chr16:19643860-19644137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr16:9553036-9553216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr16:21370210-21370023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 63
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr16:11135004-11134799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr16:25386954-25387155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr16:38708860-38708648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr16:13689643-13689865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr16:45122012-45122245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 191
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr16:47820545-47820775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
144, 67
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr16:20824454-20824682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr16:52170033-52170261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
222, 9
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr16:45677955-45678183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr16:25839597-25839821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr16:48398277-48398042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
222, 136
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr16:42078870-42078626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
223, 67
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr16:33198460-33198215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr16:30305835-30305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
15-273
               

               
Cow position:
               
chr16:1582949-1582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr16:11584427-11584177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr16:23729946-23729725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr16:424835-424605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 107
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr16:31149356-31149594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr16:48956775-48957020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
18-179
               

               
Cow position:
               
chr16:33235181-33235024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
20-248
               

               
Cow position:
               
chr16:45294526-45294756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
21-230
               

               
Cow position:
               
chr16:33645998-33646204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 127
               

               
Conread position:
               
23-258
               

               
Cow position:
               
chr16:17135075-17134845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
33-229
               

               
Cow position:
               
chr16:34205069-34204877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
180, 118
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr16:19478761-19478544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
82-248
               

               
Cow position:
               
chr16:31011371-31011535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr17:21718990-21718727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr17:12959114-12959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr17:21114938-21114730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr17:11664568-11664349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr17:31037360-31037149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 135
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr17:42150408-42150616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr17:908758-908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
219, 18
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr17:26575212-26574978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 158
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr17:37341021-37340788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr17:25800865-25800639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr17:29995419-29995187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
219, 152
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr17:43315269-43315043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr17:7810738-7810499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr17:12325748-12325507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr17:25901217-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 192
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr17:32138407-32138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
138, 192
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr17:21325349-21325602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
178, 133
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chr17:24004390-24004602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 105
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr17:32989495-32989720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr17:32993605-32993380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
16-259
               

               
Cow position:
               
chr17:24824260-24824502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
134, 190
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chr17:7959198-7959444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr17:30728522-30728770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 134
               

               
Conread position:
               
17-250
               

               
Cow position:
               
chr17:25128334-25128103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
221, 131
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr17:3577559-3577895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
342, 113
               

               
Conread position:
               
19-252
               

               
Cow position:
               
chr17:1634471-1634241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
212, 129
               

               
Conread position:
               
22-260
               

               
Cow position:
               
chr17:32333067-32332837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
146, 128
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr17:9824697-9824911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
83-257
               

               
Cow position:
               
chr17:20836175-20836345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr18:55505340-55505595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
8-247
               

               
Cow position:
               
chr18:51383459-51383224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
226, 30
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr18:28657973-28657780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr18:44917698-44917929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
15-209
               

               
Cow position:
               
chr18:52413908-52414108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr18:12242220-12242444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr18:38937765-38937991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr18:2773449-2773214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr18:2776952-2776717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
153, 130
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr18:22790142-22789918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr18:23630661-23630440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
219, 61
               

               
Conread position:
               
15-252
               

               
Cow position:
               
chr18:1954646-1954404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 193
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr18:31082405-31082166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 177
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr18:22569123-22568887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr18:17391050-17390804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 72
               

               
Conread position:
               
15-267
               

               
Cow position:
               
chr18:49038405-49038642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr18:1571292-1571027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
216, 42
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr18:10891459-10891680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
17-245
               

               
Cow position:
               
chr18:9974383-9974160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
21-229
               

               
Cow position:
               
chr18:9365868-9366076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 147
               

               
Conread position:
               
24-248
               

               
Cow position:
               
chr18:50632490-50632271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
214, 115
               

               
Conread position:
               
33-243
               

               
Cow position:
               
chr18:11672004-11672222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr18:41702807-41703020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
44-248
               

               
Cow position:
               
chr18:49603071-49602869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr19:16096598-16096357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr19:3621395-3621603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
181, 101
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr19:33913492-33913704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 187
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr19:48960363-48960569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr19:21378503-21378289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr19:42517290-42517077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr19:23394752-23394970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr19:38732104-38732327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 111
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr19:42768133-42767913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr19:28810352-28810124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr19:10238702-10238929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr19:7668667-7668891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
223, 61
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr19:22043387-22043161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
216, 95
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr19:23889522-23889291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr19:33575489-33575714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr19:23087949-23088185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr19:11560076-11559817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr19:12052880-12052650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
152, 72
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr19:12067711-12067941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
152, 72
               

               
Conread position:
               
16-255
               

               
Cow position:
               
chr19:49221655-49221422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr19:7637269-7637025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr19:15852902-15853138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr19:23378642-23378904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
261, 151
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr19:34654641-34654434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
20-245
               

               
Cow position:
               
chr19:24005625-24005846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
20-260
               

               
Cow position:
               
chr19:23784445-23784219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
233, 38
               

               
Conread position:
               
27-261
               

               
Cow position:
               
chr19:11646544-11646769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
33-229
               

               
Cow position:
               
chr19:52728595-52728787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 77
               

               
Conread position:
               
37-230
               

               
Cow position:
               
chr19:19916433-19916246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
80-247
               

               
Cow position:
               
chr19:22414236-22414073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr2:971793-972033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr2:77157373-77157160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr2:41248543-41248770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr2:50449938-50449705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr2:43591399-43591154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
14-265
               

               
Cow position:
               
chr2:29121859-29122106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
15-156
               

               
Cow position:
               
chr2:15694183-15694322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr2:46968212-46968031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr2:17842011-17841794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr2:82116067-82116284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr2:19494191-19494417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr2:46161934-46162157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr2:13001776-13002003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr2:44065554-44065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
219, 38
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr2:71437401-71437164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 135
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr2:40703689-40703459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr2:46351805-46351565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr2:21410196-21410446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr2:11599402-11599642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr2:18997697-18997938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr2:45499225-45498973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
219, 133
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr2:46189119-46188872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr2:13672501-13672742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-277
               

               
Cow position:
               
chr2:46033312-46033572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
216, 154
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr2:45542421-45542210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr2:44051289-44051513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr2:45596961-45597216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
218, 64
               

               
Conread position:
               
18-254
               

               
Cow position:
               
chr2:5604505-5604731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr2:51099991-51099786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr2:1476397-1476616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
44-255
               

               
Cow position:
               
chr2:4207562-4207357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr2:3773282-3773120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr20:15766117-15766316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 165
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr20:32463512-32463323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr20:7426183-7425923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
218, 138
               

               
Conread position:
               
11-251
               

               
Cow position:
               
chr20:24097016-24097246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
15-200
               

               
Cow position:
               
chr20:16935291-16935114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr20:3148703-3148909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr20:5702743-5702951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 111
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr20:15529880-15530100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr20:25009612-25009392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr20:18379398-18379623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr20:39398500-39398730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr20:26996550-26996782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr20:2298767-2298546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr20:3255056-3255282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr20:20158155-20158381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
223, 133
               

               
Conread position:
               
15-253
               

               
Cow position:
               
chr20:2819564-2819802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr20:7738212-7737977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr20:2204665-2204428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr20:23846646-23846408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr20:28982721-28982958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr20:12581935-12581689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr20:32847366-32847601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
18-228
               

               
Cow position:
               
chr20:28605232-28605435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
37-227
               

               
Cow position:
               
chr20:26041057-26040869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr21:47719267-47719017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr21:24875385-24875602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr21:39393782-39394030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 140
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr21:802281-802073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr21:29069287-29069072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr21:11740079-11739854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr21:34654114-34654338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr21:641627-641853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 133
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr21:33982767-33982544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr21:16498559-16498793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr21:36682365-36682608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 163
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr21:742328-742561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
222, 41
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr21:17252936-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
19-202
               

               
Cow position:
               
chr21:29214116-29213930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr21:41590521-41590286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr21:32559314-32559083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
166, 123
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr21:25012137-25012355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
201, 92
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr21:8506488-8506276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
198, 115
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr21:8509376-8509164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
198, 115
               

               
Conread position:
               
82-248
               

               
Cow position:
               
chr21:44732937-44732773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr22:4315593-4315817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
163, 77
               

               
Conread position:
               
10-200
               

               
Cow position:
               
chr22:4119594-4119407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr22:4060975-4060744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr22:43397975-43398182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr22:14141369-14141157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr22:15568042-15567838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr22:38439184-38438959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr22:18021059-18020830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
137, 88
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr22:44717689-44717923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr22:2100973-2100744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
216, 132
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr22:17152650-17152890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 162
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr22:13957671-13957441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr22:6289530-6289286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 111
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr22:12902874-12902643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr22:6709819-6709574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr22:4163952-4164205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr22:12803411-12803188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-249
               

               
Cow position:
               
chr22:2109652-2109427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr22:12157870-12157626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr22:5616277-5616493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr22:36432995-36432768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
19-268
               

               
Cow position:
               
chr22:17652412-17652656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
243, 129
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr22:42635453-42635249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr22:16813783-16813996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
27-248
               

               
Cow position:
               
chr22:7584251-7584041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
33-248
               

               
Cow position:
               
chr22:11613415-11613629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
190, 133
               

               
Conread position:
               
93-248
               

               
Cow position:
               
chr22:12981674-12981522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr23:2501883-2501667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
13-256
               

               
Cow position:
               
chr23:22238845-22238599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 194
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr23:1883372-1883582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr23:5785823-5786001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr23:22586859-22587078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr23:16881184-16880964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr23:3293674-3293916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr23:24966484-24966235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 153
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr23:21452750-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr23:12363638-12363396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr23:8698400-8698651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
138, 184
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr23:20093261-20093035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr23:5426416-5426661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
123, 184
               

               
Conread position:
               
42-264
               

               
Cow position:
               
chr23:7155687-7155477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
49-229
               

               
Cow position:
               
chr23:5686184-5686006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr24:230221-230489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr24:22133115-22133326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
216, 141
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr24:31816530-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr24:5360671-5360874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr24:28233997-28234223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-253
               

               
Cow position:
               
chr24:37975029-37974799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr24:15288779-15289018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 108
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr24:30314074-30313839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr24:13948075-13948321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 72
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr24:18357100-18356848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
198, 133
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr24:1269738-1269990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr24:30235827-30236034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr24:2402414-2402195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr24:20364456-20364234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
19-243
               

               
Cow position:
               
chr24:42687804-42688018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
19-259
               

               
Cow position:
               
chr24:37823483-37823716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
35-248
               

               
Cow position:
               
chr24:3412655-3412862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
177, 104
               

               
Conread position:
               
14-259
               

               
Cow position:
               
chr25:9843149-9843394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
154, 192
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr25:1840298-1840506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr25:4521863-4521656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr25:11432971-11432767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr25:19364085-19363875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr25:35339216-35339005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr25:23245028-23244818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr25:28597638-28597399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr25:22348489-22348244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 189
               

               
Conread position:
               
15-333
               

               
Cow position:
               
chr25:33457706-33458004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr25:18810318-18810467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr25:13222875-13223080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr25:33550484-33550712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr25:13272544-13272772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr25:7673271-7673501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr25:36873357-36873108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
214, 129
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr25:26306226-26306018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
42-257
               

               
Cow position:
               
chr25:18721119-18720911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
192, 106
               

               
Conread position:
               
45-264
               

               
Cow position:
               
chr25:24115312-24115095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
83-260
               

               
Cow position:
               
chr25:17141143-17141318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
88-258
               

               
Cow position:
               
chr25:2414844-2415007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr26:34724891-34724674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr26:647741-647491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
10-200
               

               
Cow position:
               
chr26:6487811-6487616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr26:32897881-32897677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 100
               

               
Conread position:
               
15-201
               

               
Cow position:
               
chr26:8307535-8307350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr26:5836827-5836604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 154
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr26:7314615-7314848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr26:23924843-23925064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr26:33202077-33201850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr26:12940393-12940631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 192
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr26:20291698-20291472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
17-259
               

               
Cow position:
               
chr26:19636287-19636522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
17-259
               

               
Cow position:
               
chr26:33241884-33242127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
151, 167
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr26:26888138-26887902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr26:15132656-15132858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr27:7343434-7343676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr27:23560041-23560295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr27:15002992-15003210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
11-247
               

               
Cow position:
               
chr27:19685729-19685961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
218, 139
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr27:23452441-23452232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr27:29597771-29597996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
223, 29
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr27:15454188-15453961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr27:23890918-23890666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 155
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr27:426949-426700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr27:19387997-19387770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
222, 53
               

               
Conread position:
               
16-256
               

               
Cow position:
               
chr27:19508992-19508757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
152, 132
               

               
Conread position:
               
18-258
               

               
Cow position:
               
chr27:22171274-22171040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
216, 58
               

               
Conread position:
               
18-265
               

               
Cow position:
               
chr27:16103784-16103548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr27:29615002-29614760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
199, 115
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr28:9705627-9705882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr28:5254851-5255094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr28:4158932-4159186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
143, 197
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr28:26531297-26531088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr28:29850835-29850604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr28:16346550-16346346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr28:4090072-4089857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr28:5204176-5204393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
219, 133
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr28:4181982-4182211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
219, 152
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr28:25056947-25057164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr28:3445499-3445256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr28:21868438-21868681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr28:22346002-22346257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
15-272
               

               
Cow position:
               
chr28:7350635-7350884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
249, 133
               

               
Conread position:
               
15-290
               

               
Cow position:
               
chr28:9636476-9636211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-475
               

               
Cow position:
               
chr28:11585221-11584776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
243, 133
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr28:17739807-17740016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr28:12430588-12430808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
17-245
               

               
Cow position:
               
chr28:4013067-4013291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr28:16919185-16918948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
21-246
               

               
Cow position:
               
chr28:7132100-7131882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
23-245
               

               
Cow position:
               
chr28:4364833-4364618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr28:13474290-13474523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 122
               

               
Conread position:
               
30-251
               

               
Cow position:
               
chr28:30902122-30902332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
33-268
               

               
Cow position:
               
chr28:22332527-22332762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 136
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr29:41112915-41112687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr29:40117539-40117751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
15-172
               

               
Cow position:
               
chr29:38978506-38978661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 91
               

               
Conread position:
               
15-231
               

               
Cow position:
               
chr29:32197671-32197882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr29:29923598-29923375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr29:20770321-20770547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 60
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr29:25737440-25737215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
16-202
               

               
Cow position:
               
chr29:22723576-22723759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr29:34359003-34358793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 134
               

               
Conread position:
               
16-259
               

               
Cow position:
               
chr29:36530842-36531081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
17-249
               

               
Cow position:
               
chr29:21666063-21666291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
18-266
               

               
Cow position:
               
chr29:7290753-7290986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr29:29324442-29324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
21-224
               

               
Cow position:
               
chr29:23825230-23825031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
21-248
               

               
Cow position:
               
chr29:39038289-39038064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr29:9378622-9378848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr29:36781315-36781091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
219, 121
               

               
Conread position:
               
30-262
               

               
Cow position:
               
chr29:19363700-19363927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr3:78077127-78077372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
100, 150
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr3:78092564-78092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 111
               

               
Conread position:
               
11-268
               

               
Cow position:
               
chr3:70565790-70565528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
157, 139
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr3:59610769-59610557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr3:3316864-3316585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr3:10668927-10668716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr3:15950961-15950754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr3:22165463-22165252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr3:74079684-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
15-239
               

               
Cow position:
               
chr3:44932468-44932686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
216, 90
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr3:10958288-10958070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr3:49363061-49363281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr3:52608134-52608354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr3:55177794-55177571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr3:68004750-68004525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-250
               

               
Cow position:
               
chr3:7337829-7337603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
170, 5
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr3:54506659-54506896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr3:50768631-50768877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr3:59604798-59605040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
15-273
               

               
Cow position:
               
chr3:64196778-64197030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr3:19585816-19586070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
15-390
               

               
Cow position:
               
chr3:55189802-55189413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
16-173
               

               
Cow position:
               
chr3:56059764-56059918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr3:19626553-19626377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chr3:26603602-26603382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr3:60264763-60264530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr3:48072928-48072706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
214, 131
               

               
Conread position:
               
17-257
               

               
Cow position:
               
chr3:68156676-68156918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 191
               

               
Conread position:
               
37-258
               

               
Cow position:
               
chr3:67407392-67407179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
83-290
               

               
Cow position:
               
chr3:82425059-82424862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr4:42423845-42423576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
10-260
               

               
Cow position:
               
chr4:18951937-18952189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 159
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr4:21874141-21874372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 157
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr4:8182674-8182433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 160
               

               
Conread position:
               
15-200
               

               
Cow position:
               
chr4:38935328-38935512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
15-219
               

               
Cow position:
               
chr4:38210006-38209806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr4:48485963-48486173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr4:38157119-38156915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr4:40414659-40414450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr4:52832047-52831836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr4:68590746-68590948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr4:20027134-20026908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
15-250
               

               
Cow position:
               
chr4:31136725-31136955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr4:4319183-4318943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr4:19118986-19119228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr4:44773074-44772825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
153, 190
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr4:36290593-36290834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-267
               

               
Cow position:
               
chr4:11969425-11969671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
16-173
               

               
Cow position:
               
chr4:44903264-44903417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr4:60719071-60719290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr4:69290773-69290520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 133
               

               
Conread position:
               
16-321
               

               
Cow position:
               
chr4:28772097-28771786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
205, 132
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr4:10558509-10558736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr4:13344514-13344715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
23-248
               

               
Cow position:
               
chr4:60527157-60527379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
23-269
               

               
Cow position:
               
chr4:33838823-33838588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr4:42374155-42373965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr5:35826597-35826832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr5:9894128-9893872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 138
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr5:22795214-22795439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr5:21617457-21617686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr5:69099722-69099931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr5:40109495-40109709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr5:30276692-30276913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
195, 118
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr5:30629157-30628926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr5:17087018-17086788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr5:57686735-57686511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
203, 133
               

               
Conread position:
               
15-247
               

               
Cow position:
               
chr5:65941248-65941016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr5:43402907-43403146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 118
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr5:59626969-59626725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
219, 111
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr5:26549138-26548892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
223, 131
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr5:56070862-56071090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
218, 132
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr5:60016171-60016397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr5:20288259-20288028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 188
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr5:44028299-44028073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr5:50824596-50824831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr5:35684942-35685188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr5:45845685-45845449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
24-201
               

               
Cow position:
               
chr5:38168905-38169080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 125
               

               
Conread position:
               
25-256
               

               
Cow position:
               
chr5:55942367-55942134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
129, 142
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr5:35190134-35190354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr5:3817652-3817441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
10-260
               

               
Cow position:
               
chr6:61269324-61269575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 5
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr6:30023896-30024137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
11-245
               

               
Cow position:
               
chr6:18118037-18117808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
224, 56
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr6:25615082-25614845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr6:46465837-46466056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr6:38640249-38640482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr6:60273995-60273761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 133
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr6:21470413-21470180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr6:10105963-10105725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
216, 133
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr6:3351044-3351289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr6:36202837-36203082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
15-303
               

               
Cow position:
               
chr6:26915347-26915623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
16-202
               

               
Cow position:
               
chr6:61524188-61524003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
152, 132
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr6:46860150-46859944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr6:24468378-24468155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
16-258
               

               
Cow position:
               
chr6:15243271-15243515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 191
               

               
Conread position:
               
16-273
               

               
Cow position:
               
chr6:62056631-62056878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr6:2547273-2547454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
17-245
               

               
Cow position:
               
chr6:29485100-29485326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr6:2078797-2078568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
209, 153
               

               
Conread position:
               
19-248
               

               
Cow position:
               
chr6:51581232-51581009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr6:12761301-12761541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
147, 77
               

               
Conread position:
               
23-283
               

               
Cow position:
               
chr6:52478387-52478131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
37-240
               

               
Cow position:
               
chr6:21083503-21083303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr7:42593265-42593019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 202
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr7:20534885-20535118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chr7:49751143-49751407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 75
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr7:12495103-12494875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
217, 134
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr7:11487654-11487468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr7:53053385-53053160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
178, 121
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr7:35088675-35088904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr7:15559705-15559934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
216, 134
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr7:60732618-60732383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr7:27079646-27079876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr7:26263635-26263399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr7:11796884-11796644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr7:32894230-32893979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 159
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr7:6044119-6043874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr7:36996380-36996620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr7:32946086-32946326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr7:48714872-48715136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 224
               

               
Conread position:
               
16-245
               

               
Cow position:
               
chr7:33393328-33393554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
222, 132
               

               
Conread position:
               
16-248
               

               
Cow position:
               
chr7:6469640-6469874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr7:50066096-50065851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 135
               

               
Conread position:
               
18-243
               

               
Cow position:
               
chr7:26871970-26871747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr7:8658539-8658741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
21-247
               

               
Cow position:
               
chr7:17713447-17713214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
128, 175
               

               
Conread position:
               
24-248
               

               
Cow position:
               
chr7:20968444-20968673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
42-263
               

               
Cow position:
               
chr7:17750797-17750580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 106
               

               
Conread position:
               
45-252
               

               
Cow position:
               
chr7:23671800-23672005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr8:46235675-46235929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr8:32621007-32620759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 163
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr8:834402-834611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
15-166
               

               
Cow position:
               
chr8:15856960-15857112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-166
               

               
Cow position:
               
chr8:39174256-39174104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr8:35580648-35580464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr8:41219315-41219527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr8:48527979-48527766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 139
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr8:39807586-39807812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr8:31985250-31985475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 101
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr8:35971837-35972068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
219, 87
               

               
Conread position:
               
15-250
               

               
Cow position:
               
chr8:32133256-32133485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
223, 152
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr8:10970821-10971061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr8:40280674-40280910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr8:8190077-8189828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 138
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr8:44449616-44449375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr8:55884960-55885219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
219, 133
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr8:5437753-5437976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr8:3914579-3914826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 117
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr8:37636006-37635762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr8:55716743-55716995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
17-261
               

               
Cow position:
               
chr8:47169933-47170172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 116
               

               
Conread position:
               
20-242
               

               
Cow position:
               
chr8:48555664-48555451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
20-248
               

               
Cow position:
               
chr8:1303900-1304122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
20-259
               

               
Cow position:
               
chr8:49305757-49305524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
25-248
               

               
Cow position:
               
chr8:33640362-33640580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr8:16053749-16053959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr9:57131556-57131339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr9:6189306-6189542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr9:17872057-17872265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr9:21460101-21460324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr9:45285482-45285710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 155
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr9:4341106-4341333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr9:37199180-37198938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 131
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr9:17840625-17840868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr9:33584633-33584873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr9:34286852-34286605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
153, 133
               

               
Conread position:
               
16-202
               

               
Cow position:
               
chr9:39011417-39011602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr9:43757593-43757386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
16-246
               

               
Cow position:
               
chr9:13169611-13169840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
152, 123
               

               
Conread position:
               
16-266
               

               
Cow position:
               
chr9:12910349-12910594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
16-289
               

               
Cow position:
               
chr9:41728310-41728041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
243, 82
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chr9:33119837-33120023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
19-261
               

               
Cow position:
               
chr9:61303049-61302816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
20-166
               

               
Cow position:
               
chr9:55354659-55354515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr9:34958008-34958210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr9:26279122-26279370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
40-248
               

               
Cow position:
               
chr9:19771394-19771183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
42-257
               

               
Cow position:
               
chr9:12773716-12773508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr9:32052293-32052100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
143, 97
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chrX:26843271-26843012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
14-280
               

               
Cow position:
               
chrX:22115315-22115052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 217
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chrX:1466165-1466379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
186, 135
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chrX:34837060-34836835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
228, 13
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chrX:22392981-22392747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
223, 121
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chrX:2935960-2936196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chrX:5118499-5118253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chrX:11656084-11656325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chrX:39290362-39290599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
15-272
               

               
Cow position:
               
chrX:31436477-31436728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
15-272
               

               
Cow position:
               
chrX:32208819-32208571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chrX:6599779-6599513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 194
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chrX:47345330-47345598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 156
               

               
Conread position:
               
15-282
               

               
Cow position:
               
chrX:16836283-16836032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
16-255
               

               
Cow position:
               
chrX:37781105-37780870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chrX:27145608-27145844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chrX:34505045-34504797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chrX:22482692-22482474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chrX:40685323-40685113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
151, 131
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chrX:42927819-42927595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chrX:29050257-29050476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
212, 55
               

               
Conread position:
               
22-266
               

               
Cow position:
               
chrX:38301819-38302068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
23-243
               

               
Cow position:
               
chrX:29467767-29467553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
25-262
               

               
Cow position:
               
chrX:20957251-20957483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
143, 177
               

               
Conread position:
               
26-243
               

               
Cow position:
               
chrX:9252149-9251933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
142, 124
               

               
Conread position:
               
37-260
               

               
Cow position:
               
chrX:32866900-32867119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
201, 111
               

               
Conread position:
               
41-248
               

               
Cow position:
               
chrX:37072418-37072621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0