Cow genome map
| Conread name: | rfce17c_g10.y1 |
| Conread position: | 75-286 |
| Cow position: | chr1:57982010-57981793 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 75-249 |
| Cow position: | chr10:39438774-39438599 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 75-254 |
| Cow position: | chr10:19503926-19503754 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 75-435 |
| Cow position: | chr10:57460848-57461192 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 50 |
| Conread position: | 102-437 |
| Cow position: | chr10:48259720-48259397 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 102 |
| Conread position: | 308-436 |
| Cow position: | chr10:58259811-58259680 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 308-438 |
| Cow position: | chr10:8923639-8923776 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 309-438 |
| Cow position: | chr10:7367078-7366948 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 310-437 |
| Cow position: | chr10:1976614-1976484 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 74-244 |
| Cow position: | chr11:9653997-9653830 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 165, 91 |
| Conread position: | 74-248 |
| Cow position: | chr11:2911263-2911098 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 165, 79 |
| Conread position: | 75-256 |
| Cow position: | chr11:23138526-23138340 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 75-437 |
| Cow position: | chr11:49935250-49934898 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 81-246 |
| Cow position: | chr11:2343843-2344004 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 84-238 |
| Cow position: | chr11:81551625-81551472 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 299-438 |
| Cow position: | chr11:63920587-63920443 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 305-438 |
| Cow position: | chr11:80530077-80530209 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 311-438 |
| Cow position: | chr11:18086625-18086496 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 77-246 |
| Cow position: | chr12:8841256-8841087 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 161, 124 |
| Conread position: | 266-438 |
| Cow position: | chr12:17031272-17031438 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 75-234 |
| Cow position: | chr13:49805384-49805227 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 284-428 |
| Cow position: | chr13:43629495-43629638 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 288-433 |
| Cow position: | chr13:30693978-30693830 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 142 |
| Conread position: | 299-429 |
| Cow position: | chr13:48251726-48251859 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 80-272 |
| Cow position: | chr14:40999561-40999363 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 180 |
| Conread position: | 84-284 |
| Cow position: | chr14:12857113-12856908 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 119-414 |
| Cow position: | chr14:23230659-23230943 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 285-438 |
| Cow position: | chr14:27312758-27312607 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 119-438 |
| Cow position: | chr15:53232005-53231694 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 297, 32 |
| Conread position: | 76-230 |
| Cow position: | chr16:15848569-15848417 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 119-424 |
| Cow position: | chr16:36911502-36911189 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 175, 85 |
| Conread position: | 123-284 |
| Cow position: | chr16:23680950-23681113 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 135-252 |
| Cow position: | chr16:25661084-25660968 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 308-438 |
| Cow position: | chr16:44744404-44744277 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 240-435 |
| Cow position: | chr17:9746221-9746417 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 299-433 |
| Cow position: | chr17:5745483-5745350 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 312-435 |
| Cow position: | chr17:11216110-11215987 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 102, 115 |
| Conread position: | 74-280 |
| Cow position: | chr18:50381533-50381753 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 194 |
| Conread position: | 308-436 |
| Cow position: | chr18:25206496-25206363 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 311-421 |
| Cow position: | chr18:36769226-36769118 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 74-238 |
| Cow position: | chr19:33932587-33932424 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 84-238 |
| Cow position: | chr19:8375733-8375582 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 134-438 |
| Cow position: | chr19:11146073-11145759 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 308-438 |
| Cow position: | chr19:9293987-9294119 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 311-437 |
| Cow position: | chr19:14347730-14347861 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 75-230 |
| Cow position: | chr2:16018718-16018556 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 310-438 |
| Cow position: | chr2:22372214-22372085 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 75-435 |
| Cow position: | chr20:22007067-22007401 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 299-437 |
| Cow position: | chr20:12420859-12420715 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 75-248 |
| Cow position: | chr21:22140710-22140532 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 53, 131 |
| Conread position: | 119-281 |
| Cow position: | chr21:28944730-28944570 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 299-436 |
| Cow position: | chr21:34835640-34835503 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 74-424 |
| Cow position: | chr22:9286901-9286552 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 131-263 |
| Cow position: | chr22:31513486-31513352 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 133-434 |
| Cow position: | chr22:13274041-13274321 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 142-359 |
| Cow position: | chr22:17339983-17340202 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 287-436 |
| Cow position: | chr22:4563069-4563218 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 311-438 |
| Cow position: | chr22:38940221-38940091 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 74-230 |
| Cow position: | chr23:24562319-24562160 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 75-298 |
| Cow position: | chr23:31423063-31422837 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 75-255 |
| Cow position: | chr24:27732618-27732432 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 84-226 |
| Cow position: | chr24:9044813-9044672 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 120-415 |
| Cow position: | chr24:6151278-6151559 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 84 |
| Conread position: | 84-337 |
| Cow position: | chr26:6487257-6487000 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 299-434 |
| Cow position: | chr26:6827902-6828038 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 299-438 |
| Cow position: | chr27:19577911-19577770 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 75-238 |
| Cow position: | chr29:2136538-2136370 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 131 |
| Conread position: | 84-216 |
| Cow position: | chr29:33599529-33599398 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 84-244 |
| Cow position: | chr29:10122529-10122367 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 144, 117 |
| Conread position: | 269-437 |
| Cow position: | chr29:21933427-21933256 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 299-438 |
| Cow position: | chr29:16195570-16195709 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 122, 115 |
| Conread position: | 75-244 |
| Cow position: | chr3:73930854-73930688 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 75-248 |
| Cow position: | chr3:19711770-19711597 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 164, 123 |
| Conread position: | 75-285 |
| Cow position: | chr3:48630074-48629865 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 86-249 |
| Cow position: | chr3:55117412-55117251 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 132-437 |
| Cow position: | chr3:54050469-54050182 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 284, 72 |
| Conread position: | 288-438 |
| Cow position: | chr3:9641247-9641403 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 297-438 |
| Cow position: | chr3:17937145-17936997 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 299-438 |
| Cow position: | chr3:23471772-23471626 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 74-427 |
| Cow position: | chr4:55522862-55523212 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 130 |
| Conread position: | 75-246 |
| Cow position: | chr4:66119251-66119082 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 84-244 |
| Cow position: | chr4:3446669-3446507 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 144, 117 |
| Conread position: | 84-248 |
| Cow position: | chr4:24119341-24119177 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 155, 117 |
| Conread position: | 84-436 |
| Cow position: | chr4:3252031-3251687 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 85-281 |
| Cow position: | chr4:46370388-46370195 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 149, 120 |
| Conread position: | 117-430 |
| Cow position: | chr4:49741087-49741394 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 257, 87 |
| Conread position: | 119-284 |
| Cow position: | chr4:46083342-46083172 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 138-414 |
| Cow position: | chr4:59106266-59105984 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 309-437 |
| Cow position: | chr4:22849988-22849862 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 309-438 |
| Cow position: | chr4:20139797-20139667 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 74-235 |
| Cow position: | chr5:64823711-64823547 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 75-279 |
| Cow position: | chr5:32088166-32087963 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 79-278 |
| Cow position: | chr5:6670558-6670363 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 240-429 |
| Cow position: | chr5:54350674-54350487 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 286-438 |
| Cow position: | chr5:55967150-55966992 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 311-438 |
| Cow position: | chr5:54311090-54311219 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 74-248 |
| Cow position: | chr6:7111983-7111813 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 74-256 |
| Cow position: | chr6:42742353-42742533 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 167, 28 |
| Conread position: | 75-230 |
| Cow position: | chr6:14949902-14949750 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 75-251 |
| Cow position: | chr6:33865482-33865308 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 79-238 |
| Cow position: | chr6:10706298-10706137 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 127 |
| Conread position: | 79-438 |
| Cow position: | chr6:44195007-44194646 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 135 |
| Conread position: | 90-281 |
| Cow position: | chr6:31048926-31048726 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 311-438 |
| Cow position: | chr6:68049207-68049336 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 50-438 |
| Cow position: | chr7:33719568-33719952 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 182 |
| Conread position: | 75-224 |
| Cow position: | chr7:54638014-54637867 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 75-232 |
| Cow position: | chr7:23619474-23619319 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 134 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 75-254 |
| Cow position: | chr7:19798322-19798142 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 164, 126 |
| Conread position: | 75-304 |
| Cow position: | chr7:37454900-37455123 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 211, 130 |
| Conread position: | 107-254 |
| Cow position: | chr7:27133781-27133924 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 291-438 |
| Cow position: | chr7:20827863-20827717 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 124 |
| Conread position: | 299-429 |
| Cow position: | chr7:25867744-25867611 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 299-438 |
| Cow position: | chr7:29346175-29346037 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 299-438 |
| Cow position: | chr7:32260511-32260376 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 299-438 |
| Cow position: | chr7:56838736-56838591 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 308-414 |
| Cow position: | chr7:40263883-40263776 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 74-248 |
| Cow position: | chr8:28229891-28229718 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 75-244 |
| Cow position: | chr8:45245434-45245266 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 164, 125 |
| Conread position: | 84-238 |
| Cow position: | chr8:28295397-28295244 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 299-437 |
| Cow position: | chr8:53451242-53451384 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 299-438 |
| Cow position: | chr9:49404064-49403921 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 75-238 |
| Cow position: | chrX:42470342-42470180 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 90-244 |
| Cow position: | chrX:38218328-38218481 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 299-438 |
| Cow position: | chrX:23514272-23514127 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 70 |
| Conread position: | 308-430 |
| Cow position: | chrX:26625922-26625799 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 0 |