Cow genome map

Conread name: rhlv16b_h17.y1

Conread position: 58-146
Cow position: chr1:85712469-85712557 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-156
Cow position: chr1:77739751-77739850 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 58-186
Cow position: chr1:61513291-61513161 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 36

Conread position: 60-207
Cow position: chr1:98511958-98512108 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 117

Conread position: 65-158
Cow position: chr1:1242145-1242052 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-154
Cow position: chr10:41132264-41132360 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 58-156
Cow position: chr10:4109588-4109686 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 82

Conread position: 58-156
Cow position: chr10:58638013-58638112 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 59-157
Cow position: chr10:35893906-35893806 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 59

Conread position: 65-174
Cow position: chr10:49456086-49455977 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 104

Conread position: 58-156
Cow position: chr11:35669946-35669847 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 52

Conread position: 58-156
Cow position: chr11:56895969-56895870 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 58-156
Cow position: chr11:61958738-61958639 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 58-156
Cow position: chr11:84775080-84775179 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 59-156
Cow position: chr11:9270719-9270623 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 58-156
Cow position: chr12:44542251-44542349 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 91

Conread position: 52-158
Cow position: chr13:41616080-41616186 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 41

Conread position: 58-156
Cow position: chr13:11434614-11434711 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 58-156
Cow position: chr13:15808728-15808630 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 36

Conread position: 58-156
Cow position: chr13:17563701-17563602 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 78

Conread position: 58-156
Cow position: chr14:19618732-19618831 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 58-156
Cow position: chr14:25824714-25824616 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 58-187
Cow position: chr14:15039594-15039723 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 77, 91

Conread position: 58-156
Cow position: chr15:13554419-13554320 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 58-171
Cow position: chr15:35205087-35205201 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 58-155
Cow position: chr16:23472773-23472870 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 78

Conread position: 58-156
Cow position: chr16:7549992-7550090 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 42

Conread position: 58-156
Cow position: chr16:15905226-15905128 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 91

Conread position: 59-156
Cow position: chr16:11923003-11922904 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 65-156
Cow position: chr16:26069781-26069873 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 71-156
Cow position: chr16:23187581-23187667 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 43-154
Cow position: chr17:979118-979007 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 101

Conread position: 50-156
Cow position: chr17:3387774-3387880 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 13

Conread position: 58-160
Cow position: chr17:10508370-10508267 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 71-156
Cow position: chr17:10802954-10803040 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 52-156
Cow position: chr18:21768598-21768703 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 58-156
Cow position: chr18:2108237-2108336 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 78

Conread position: 63-156
Cow position: chr18:5462693-5462600 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 36-201
Cow position: chr19:21723717-21723550 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 27

Conread position: 58-156
Cow position: chr19:19919449-19919350 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 58-159
Cow position: chr19:55175468-55175365 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 94
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 48-156
Cow position: chr20:20099544-20099435 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 58-155
Cow position: chr20:36671366-36671268 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 68

Conread position: 58-161
Cow position: chr20:11008236-11008341 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 31-155
Cow position: chr21:8523698-8523824 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 60

Conread position: 58-156
Cow position: chr21:23586969-23587068 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 69

Conread position: 63-164
Cow position: chr21:40266213-40266317 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 158-356
Cow position: chr21:16220190-16220373 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 162-356
Cow position: chr21:19983708-19983890 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 60-156
Cow position: chr22:27052711-27052615 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 89

Conread position: 58-156
Cow position: chr23:11129259-11129358 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 59-156
Cow position: chr23:33232675-33232577 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 65-156
Cow position: chr23:32546236-32546145 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 79, 8

Conread position: 37-163
Cow position: chr24:2992903-2992776 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 30

Conread position: 63-155
Cow position: chr24:30202828-30202921 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 66-156
Cow position: chr24:20969657-20969566 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 65-156
Cow position: chr25:15305706-15305797 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-164
Cow position: chr26:19774259-19774151 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 58-164
Cow position: chr26:26245130-26245025 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 59

Conread position: 58-156
Cow position: chr27:27641079-27641177 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 31

Conread position: 58-160
Cow position: chr27:19452935-19452832 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 58-151
Cow position: chr28:10247517-10247611 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 58-156
Cow position: chr28:11365499-11365401 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 58-148
Cow position: chr29:16672512-16672602 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 78

Conread position: 34-155
Cow position: chr3:3401520-3401643 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 110

Conread position: 58-153
Cow position: chr3:73709046-73709142 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 78

Conread position: 58-156
Cow position: chr3:3889568-3889471 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 58-156
Cow position: chr3:80053542-80053445 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 46-156
Cow position: chr4:14058675-14058787 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 59

Conread position: 58-156
Cow position: chr4:61268207-61268306 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 64-156
Cow position: chr4:17430909-17430817 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-154
Cow position: chr5:65745716-65745619 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 58-156
Cow position: chr5:29828096-29828193 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 58-156
Cow position: chr5:57156263-57156165 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 58-158
Cow position: chr5:46322754-46322654 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 91

Conread position: 36-156
Cow position: chr6:34569447-34569569 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 58-155
Cow position: chr7:4060330-4060427 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 58-156
Cow position: chr8:37443564-37443661 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 36

Conread position: 58-156
Cow position: chr8:53633189-53633091 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 60-153
Cow position: chr8:53641451-53641546 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 37-156
Cow position: chr9:41781683-41781562 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 114

Conread position: 58-152
Cow position: chr9:54681515-54681421 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-155
Cow position: chr9:34135722-34135624 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 58-155
Cow position: chr9:35832613-35832709 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 59-156
Cow position: chr9:62668253-62668156 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 70

Conread position: 60-156
Cow position: chrX:40543469-40543373 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 65

Conread position: 65-156
Cow position: chrX:38094463-38094371 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 0