Cow genome map
| Conread name: | rjej40b_b6.y1 |
| Conread position: | 194-582 |
| Cow position: | chr1:43452709-43452321 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-590 |
| Cow position: | chr12:48464026-48464639 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 9-582 |
| Cow position: | chr12:36191436-36190869 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 125-589 |
| Cow position: | chr13:60611540-60612005 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 194-586 |
| Cow position: | chr13:30334624-30335005 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 227-582 |
| Cow position: | chr13:57445509-57445864 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-590 |
| Cow position: | chr15:22547610-22547053 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 290-422 |
| Cow position: | chr16:17938127-17938262 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-590 |
| Cow position: | chr17:18745704-18746302 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 290-590 |
| Cow position: | chr17:11243258-11242956 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 27 |
| Conread position: | 58-572 |
| Cow position: | chr18:50297966-50298465 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 245-471 |
| Cow position: | chr20:38066545-38066337 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 21-590 |
| Cow position: | chr21:30160295-30159718 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 194-582 |
| Cow position: | chr21:47003355-47002967 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-582 |
| Cow position: | chr24:38465831-38465445 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 178, 143 |
| Conread position: | 227-582 |
| Cow position: | chr28:25598919-25598562 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 108, 205 |
| Conread position: | 1-290 |
| Cow position: | chr29:31523572-31523885 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 290-437 |
| Cow position: | chr29:31525240-31525387 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-590 |
| Cow position: | chr29:14578214-14578389 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 436-569 |
| Cow position: | chr29:31525675-31525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-136 |
| Cow position: | chr3:5120747-5120609 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 80-590 |
| Cow position: | chr3:5120692-5120198 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 170-590 |
| Cow position: | chr3:75190048-75190468 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 206 |
| Conread position: | 194-582 |
| Cow position: | chr3:27172191-27171802 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 191, 66 |
| Conread position: | 206-560 |
| Cow position: | chr3:79273976-79274317 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 265, 39 |
| Conread position: | 195-582 |
| Cow position: | chr4:44409343-44408955 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 168, 72 |
| Conread position: | 171-582 |
| Cow position: | chr9:42068506-42068092 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 212 |
| Conread position: | 194-582 |
| Cow position: | chr9:51909251-51908862 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 1-590 |
| Cow position: | chrX:17102489-17101867 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 397-590 |
| Cow position: | chrX:13392375-13392174 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 162 |