Cow genome map


           Conread name:
           rlin03_l3.y1
        

               Conread position:
               62-260
               

               Cow position:
               chr10:12875775-12875575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 33
               

               Conread position:
               63-506
               

               Cow position:
               chr10:68204059-68203603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 56
               

               Conread position:
               70-216
               

               Cow position:
               chr10:15618727-15618581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               70-337
               

               Cow position:
               chr10:28566203-28565920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               70-360
               

               Cow position:
               chr10:1351977-1352283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               122, 295
               

               Conread position:
               70-506
               

               Cow position:
               chr10:3317906-3318362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               70-506
               

               Cow position:
               chr10:16669321-16668861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               70-507
               

               Cow position:
               chr10:11275695-11276155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 55
               

               Conread position:
               80-506
               

               Cow position:
               chr10:48193625-48193214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               109, 68
               

               Conread position:
               83-265
               

               Cow position:
               chr10:41637705-41637892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               83-357
               

               Cow position:
               chr10:22860102-22859811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               107, 233
               

               Conread position:
               83-506
               

               Cow position:
               chr10:22455247-22455674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 354
               

               Conread position:
               84-336
               

               Cow position:
               chr10:45650719-45650976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               84-506
               

               Cow position:
               chr10:38472255-38472678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 247
               

               Conread position:
               87-265
               

               Cow position:
               chr10:64074343-64074162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 168
               

               Conread position:
               87-508
               

               Cow position:
               chr10:43061054-43060611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               106-426
               

               Cow position:
               chr10:25257710-25258018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               109-339
               

               Cow position:
               chr10:67050774-67051012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 165
               

               Conread position:
               109-374
               

               Cow position:
               chr10:48208707-48208435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 210
               

               Conread position:
               122-502
               

               Cow position:
               chr10:68979641-68980004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 73
               

               Conread position:
               126-361
               

               Cow position:
               chr10:60243062-60243309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               127-506
               

               Cow position:
               chr10:37428584-37428204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 198
               

               Conread position:
               128-542
               

               Cow position:
               chr10:23880058-23879638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 190
               

               Conread position:
               129-506
               

               Cow position:
               chr10:767680-767310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               129-506
               

               Cow position:
               chr10:12199107-12199503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 245
               

               Conread position:
               143-471
               

               Cow position:
               chr10:27222882-27223220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 128
               

               Conread position:
               161-461
               

               Cow position:
               chr10:53375145-53374853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               203-338
               

               Cow position:
               chr10:63621837-63621703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               203-433
               

               Cow position:
               chr10:17923199-17923431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               204-433
               

               Cow position:
               chr10:881684-881916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               208-433
               

               Cow position:
               chr10:27132824-27132591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 161
               

               Conread position:
               208-435
               

               Cow position:
               chr10:57773587-57773806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               208-515
               

               Cow position:
               chr10:50141334-50141028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               208-517
               

               Cow position:
               chr10:47583883-47584180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               210-430
               

               Cow position:
               chr10:36303631-36303404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               210-506
               

               Cow position:
               chr10:17415698-17415410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               213-433
               

               Cow position:
               chr10:36425209-36424984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 163
               

               Conread position:
               213-433
               

               Cow position:
               chr10:58264685-58264461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               215-517
               

               Cow position:
               chr10:1328288-1327997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               228-433
               

               Cow position:
               chr10:7614590-7614782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               228-433
               

               Cow position:
               chr10:39245017-39244813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               238-543
               

               Cow position:
               chr10:15824315-15824006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               257-542
               

               Cow position:
               chr10:2711503-2711217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               260-512
               

               Cow position:
               chr10:3854978-3855212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               268-505
               

               Cow position:
               chr10:17745367-17745592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               271-468
               

               Cow position:
               chr10:19128553-19128357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 52
               

               Conread position:
               272-408
               

               Cow position:
               chr10:62629270-62629404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               285-516
               

               Cow position:
               chr10:15618173-15617953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               286-506
               

               Cow position:
               chr10:35181956-35182171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               287-461
               

               Cow position:
               chr10:9464464-9464635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               303-542
               

               Cow position:
               chr10:24609062-24609307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               47, 75
               

               Conread position:
               312-506
               

               Cow position:
               chr10:52131859-52132046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               313-506
               

               Cow position:
               chr10:41638081-41638274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               314-507
               

               Cow position:
               chr10:37092795-37092602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               123, 13
               

               Conread position:
               327-506
               

               Cow position:
               chr10:5422076-5421896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               327-517
               

               Cow position:
               chr10:37665283-37665094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               328-505
               

               Cow position:
               chr10:67051199-67051371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               342-506
               

               Cow position:
               chr10:54342983-54342820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               390-506
               

               Cow position:
               chr10:60243983-60244098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               22-441
               

               Cow position:
               chr11:21893471-21893057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               62-546
               

               Cow position:
               chr11:39831183-39830698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 177
               

               Conread position:
               63-517
               

               Cow position:
               chr11:57061917-57062362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               69-301
               

               Cow position:
               chr11:1774988-1774744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               70-232
               

               Cow position:
               chr11:24008130-24008292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               70-353
               

               Cow position:
               chr11:34024612-34024914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               70-398
               

               Cow position:
               chr11:9423961-9424300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 8
               

               Conread position:
               70-483
               

               Cow position:
               chr11:52859507-52859924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               85, 204
               

               Conread position:
               70-506
               

               Cow position:
               chr11:5221382-5220941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 319
               

               Conread position:
               70-506
               

               Cow position:
               chr11:12790852-12791256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               70-506
               

               Cow position:
               chr11:18154204-18153756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 260
               

               Conread position:
               70-506
               

               Cow position:
               chr11:55119533-55119959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 5
               

               Conread position:
               70-515
               

               Cow position:
               chr11:43831745-43831298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               70-542
               

               Cow position:
               chr11:25972863-25972416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 165
               

               Conread position:
               71-499
               

               Cow position:
               chr11:35251942-35251507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               71-506
               

               Cow position:
               chr11:77772635-77772206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 5
               

               Conread position:
               71-543
               

               Cow position:
               chr11:10877301-10877783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               72-506
               

               Cow position:
               chr11:25807691-25807245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 73
               

               Conread position:
               76-506
               

               Cow position:
               chr11:77756707-77756265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 206
               

               Conread position:
               81-229
               

               Cow position:
               chr11:23738727-23738577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               83-506
               

               Cow position:
               chr11:69491481-69491905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 38
               

               Conread position:
               86-407
               

               Cow position:
               chr11:51177547-51177870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               87-517
               

               Cow position:
               chr11:82528938-82529367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               93-517
               

               Cow position:
               chr11:34761645-34761225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 170
               

               Conread position:
               99-371
               

               Cow position:
               chr11:34265484-34265759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               131, 80
               

               Conread position:
               106-506
               

               Cow position:
               chr11:57153580-57153168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 226
               

               Conread position:
               109-505
               

               Cow position:
               chr11:22851122-22851532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 173
               

               Conread position:
               110-504
               

               Cow position:
               chr11:57753302-57752889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               110-515
               

               Cow position:
               chr11:34303550-34303968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 279
               

               Conread position:
               125-250
               

               Cow position:
               chr11:74171598-74171470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               125-506
               

               Cow position:
               chr11:77820165-77819793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               133-517
               

               Cow position:
               chr11:40574664-40574272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               183-493
               

               Cow position:
               chr11:25856367-25856669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               185-515
               

               Cow position:
               chr11:34397645-34397982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               7, 188
               

               Conread position:
               192-496
               

               Cow position:
               chr11:18452969-18452669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               203-502
               

               Cow position:
               chr11:11109914-11109615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               208-508
               

               Cow position:
               chr11:21544244-21544530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 89
               

               Conread position:
               210-433
               

               Cow position:
               chr11:29014279-29014506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               210-508
               

               Cow position:
               chr11:58793804-58793513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               210-517
               

               Cow position:
               chr11:24008294-24008602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               210-542
               

               Cow position:
               chr11:8087959-8087632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               224-506
               

               Cow position:
               chr11:80269630-80269361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               253-447
               

               Cow position:
               chr11:64501803-64501997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               256-507
               

               Cow position:
               chr11:84729183-84729430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               261-437
               

               Cow position:
               chr11:80002976-80003153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               261-509
               

               Cow position:
               chr11:29785348-29785609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               263-504
               

               Cow position:
               chr11:15885547-15885787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 119
               

               Conread position:
               263-504
               

               Cow position:
               chr11:74171360-74171125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               275-438
               

               Cow position:
               chr11:58579871-58580034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               275-488
               

               Cow position:
               chr11:12064971-12065181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               290-515
               

               Cow position:
               chr11:1774617-1774383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               298-506
               

               Cow position:
               chr11:70605664-70605870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               299-506
               

               Cow position:
               chr11:77713370-77713169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               163, 78
               

               Conread position:
               308-506
               

               Cow position:
               chr11:44064176-44064377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               126, 69
               

               Conread position:
               319-506
               

               Cow position:
               chr11:21909843-21909642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               328-506
               

               Cow position:
               chr11:19567355-19567530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               328-517
               

               Cow position:
               chr11:35284417-35284596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               331-517
               

               Cow position:
               chr11:55283211-55283016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               355-542
               

               Cow position:
               chr11:54204481-54204297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               153, 16
               

               Conread position:
               63-327
               

               Cow position:
               chr12:23498156-23498430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               63-547
               

               Cow position:
               chr12:26311068-26310589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               70-216
               

               Cow position:
               chr12:12982835-12982686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-324
               

               Cow position:
               chr12:25513911-25514169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               70-339
               

               Cow position:
               chr12:29760609-29760338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 219
               

               Conread position:
               70-506
               

               Cow position:
               chr12:2838216-2837791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 51
               

               Conread position:
               70-537
               

               Cow position:
               chr12:16961633-16962095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               71-362
               

               Cow position:
               chr12:23892559-23892848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 33
               

               Conread position:
               72-506
               

               Cow position:
               chr12:10161930-10161478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 166
               

               Conread position:
               72-506
               

               Cow position:
               chr12:27423288-27423725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 121
               

               Conread position:
               72-507
               

               Cow position:
               chr12:33277939-33278379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 335
               

               Conread position:
               75-506
               

               Cow position:
               chr12:1993547-1993101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               75-506
               

               Cow position:
               chr12:21066233-21066683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               124-517
               

               Cow position:
               chr12:36975350-36974949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               127-508
               

               Cow position:
               chr12:8468100-8467722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               141-506
               

               Cow position:
               chr12:7025354-7024975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               153-506
               

               Cow position:
               chr12:18442783-18443130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 85
               

               Conread position:
               192-508
               

               Cow position:
               chr12:7936928-7936608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               208-422
               

               Cow position:
               chr12:33875683-33875473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               209-504
               

               Cow position:
               chr12:33277438-33277151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               217-496
               

               Cow position:
               chr12:8767451-8767174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               221-373
               

               Cow position:
               chr12:38632187-38632342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               227-506
               

               Cow position:
               chr12:28214288-28214561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               233-505
               

               Cow position:
               chr12:20227181-20226912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               263-517
               

               Cow position:
               chr12:11306412-11306156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               291-508
               

               Cow position:
               chr12:38223295-38223069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               291-516
               

               Cow position:
               chr12:5896818-5896591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               303-512
               

               Cow position:
               chr12:27718094-27718290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               330-506
               

               Cow position:
               chr12:12763916-12763742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               342-542
               

               Cow position:
               chr12:29759186-29758979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               63-375
               

               Cow position:
               chr13:37497804-37498112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 64
               

               Conread position:
               63-505
               

               Cow position:
               chr13:34885037-34885495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-506
               

               Cow position:
               chr13:38535304-38534882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 53
               

               Conread position:
               70-215
               

               Cow position:
               chr13:46349584-46349732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-216
               

               Cow position:
               chr13:1367933-1367783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               70-216
               

               Cow position:
               chr13:43384712-43384862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-471
               

               Cow position:
               chr13:39487408-39487813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 51
               

               Conread position:
               70-488
               

               Cow position:
               chr13:55406742-55407165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 99
               

               Conread position:
               70-499
               

               Cow position:
               chr13:34931369-34931762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 37
               

               Conread position:
               70-506
               

               Cow position:
               chr13:12325187-12325602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 193
               

               Conread position:
               70-506
               

               Cow position:
               chr13:38362199-38361780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               72-506
               

               Cow position:
               chr13:19115504-19115926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               75-506
               

               Cow position:
               chr13:46464735-46464308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               80-542
               

               Cow position:
               chr13:45497344-45497815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 185
               

               Conread position:
               81-519
               

               Cow position:
               chr13:34336353-34336769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               90-309
               

               Cow position:
               chr13:11441448-11441672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               111-542
               

               Cow position:
               chr13:34264980-34264554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 233
               

               Conread position:
               117-516
               

               Cow position:
               chr13:51240852-51241251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               122-506
               

               Cow position:
               chr13:47325775-47325382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 280
               

               Conread position:
               124-323
               

               Cow position:
               chr13:59997899-59997688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 108
               

               Conread position:
               124-350
               

               Cow position:
               chr13:9103773-9103547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               124-375
               

               Cow position:
               chr13:62271996-62271742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 206
               

               Conread position:
               125-488
               

               Cow position:
               chr13:24675801-24676162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               134-542
               

               Cow position:
               chr13:25955478-25955067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               136-358
               

               Cow position:
               chr13:30833978-30834196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               145-506
               

               Cow position:
               chr13:17169350-17169706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               166-503
               

               Cow position:
               chr13:44144242-44143895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               168-375
               

               Cow position:
               chr13:18839096-18839313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               177-460
               

               Cow position:
               chr13:26942985-26943280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               178-499
               

               Cow position:
               chr13:24404186-24403861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               207-433
               

               Cow position:
               chr13:21826381-21826593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               207-447
               

               Cow position:
               chr13:43848879-43848642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               207-506
               

               Cow position:
               chr13:43803135-43803448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               207-530
               

               Cow position:
               chr13:20656543-20656876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 171
               

               Conread position:
               208-438
               

               Cow position:
               chr13:17127538-17127306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               208-441
               

               Cow position:
               chr13:46131798-46131567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               208-505
               

               Cow position:
               chr13:28605624-28605932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 184
               

               Conread position:
               208-506
               

               Cow position:
               chr13:7804067-7803761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               208-509
               

               Cow position:
               chr13:33239730-33240036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               208-537
               

               Cow position:
               chr13:15731349-15731029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               70, 170
               

               Conread position:
               209-508
               

               Cow position:
               chr13:26255508-26255208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               210-522
               

               Cow position:
               chr13:21878461-21878148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               243-504
               

               Cow position:
               chr13:51142759-51142503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 130
               

               Conread position:
               250-517
               

               Cow position:
               chr13:11223161-11222899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               258-433
               

               Cow position:
               chr13:11570721-11570551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               263-501
               

               Cow position:
               chr13:27844136-27843911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               263-547
               

               Cow position:
               chr13:47280006-47279721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 5
               

               Conread position:
               264-508
               

               Cow position:
               chr13:5619407-5619160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               268-504
               

               Cow position:
               chr13:12213758-12213994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               278-506
               

               Cow position:
               chr13:51435192-51434967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               290-516
               

               Cow position:
               chr13:4796125-4796354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               291-514
               

               Cow position:
               chr13:27726256-27726467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 49
               

               Conread position:
               298-506
               

               Cow position:
               chr13:698697-698890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               305-506
               

               Cow position:
               chr13:22193726-22193923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               311-504
               

               Cow position:
               chr13:59997477-59997279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               315-506
               

               Cow position:
               chr13:18597037-18596849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               317-504
               

               Cow position:
               chr13:22984781-22984970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               317-516
               

               Cow position:
               chr13:57611549-57611747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 60
               

               Conread position:
               322-506
               

               Cow position:
               chr13:10854683-10854500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               324-504
               

               Cow position:
               chr13:2416382-2416561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 58
               

               Conread position:
               331-506
               

               Cow position:
               chr13:48580645-48580476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               341-506
               

               Cow position:
               chr13:9103264-9103103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               359-542
               

               Cow position:
               chr13:14708733-14708924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               397-517
               

               Cow position:
               chr13:15489927-15490049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               62-506
               

               Cow position:
               chr14:35605329-35605779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               63-506
               

               Cow position:
               chr14:27578810-27579244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               63-521
               

               Cow position:
               chr14:47880148-47880593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               64-452
               

               Cow position:
               chr14:2298935-2299318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 204
               

               Conread position:
               65-476
               

               Cow position:
               chr14:21864053-21864445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               121, 147
               

               Conread position:
               70-321
               

               Cow position:
               chr14:3436962-3436711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               119, 222
               

               Conread position:
               70-374
               

               Cow position:
               chr14:38000495-38000199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 92
               

               Conread position:
               70-410
               

               Cow position:
               chr14:45018525-45018861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               114, 90
               

               Conread position:
               70-506
               

               Cow position:
               chr14:37983431-37983867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 57
               

               Conread position:
               70-506
               

               Cow position:
               chr14:40244145-40243706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 99
               

               Conread position:
               70-521
               

               Cow position:
               chr14:41712991-41712546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 194
               

               Conread position:
               71-503
               

               Cow position:
               chr14:44454428-44453986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               312
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               71-506
               

               Cow position:
               chr14:46546013-46546443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               121, 192
               

               Conread position:
               72-220
               

               Cow position:
               chr14:25993987-25994137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               115, 98
               

               Conread position:
               72-364
               

               Cow position:
               chr14:3588469-3588776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               120, 96
               

               Conread position:
               73-506
               

               Cow position:
               chr14:28007584-28007150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               75-467
               

               Cow position:
               chr14:45185316-45184927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               118, 160
               

               Conread position:
               76-473
               

               Cow position:
               chr14:24783188-24783591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 45
               

               Conread position:
               83-517
               

               Cow position:
               chr14:15011504-15011950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 221
               

               Conread position:
               84-415
               

               Cow position:
               chr14:31810597-31810275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               86-505
               

               Cow position:
               chr14:44886506-44886089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 93
               

               Conread position:
               87-506
               

               Cow position:
               chr14:42693604-42693183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 289
               

               Conread position:
               97-513
               

               Cow position:
               chr14:42258895-42258485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               102-506
               

               Cow position:
               chr14:24193280-24192858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               109-488
               

               Cow position:
               chr14:14835201-14835595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               76, 158
               

               Conread position:
               123-547
               

               Cow position:
               chr14:19339757-19340196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 272
               

               Conread position:
               124-375
               

               Cow position:
               chr14:30020928-30021189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 131
               

               Conread position:
               126-506
               

               Cow position:
               chr14:50650454-50650080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               138-422
               

               Cow position:
               chr14:32509777-32509489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               204-506
               

               Cow position:
               chr14:19734921-19735227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               208-432
               

               Cow position:
               chr14:33099275-33099052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               208-478
               

               Cow position:
               chr14:45151906-45152176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 163
               

               Conread position:
               209-506
               

               Cow position:
               chr14:34912129-34912414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               210-498
               

               Cow position:
               chr14:46980179-46980468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               210-506
               

               Cow position:
               chr14:20642844-20643114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               210-506
               

               Cow position:
               chr14:24739080-24738776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 108
               

               Conread position:
               210-517
               

               Cow position:
               chr14:16715689-16715390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               211-520
               

               Cow position:
               chr14:27247296-27246991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               213-472
               

               Cow position:
               chr14:1314569-1314321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 42
               

               Conread position:
               214-517
               

               Cow position:
               chr14:10949686-10949979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               269-547
               

               Cow position:
               chr14:50484583-50484293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               273-506
               

               Cow position:
               chr14:17556405-17556170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               277-542
               

               Cow position:
               chr14:22046605-22046352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               278-444
               

               Cow position:
               chr14:44249933-44249769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               287-517
               

               Cow position:
               chr14:17051330-17051103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               289-461
               

               Cow position:
               chr14:25393849-25393675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               320-506
               

               Cow position:
               chr14:30762378-30762201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               322-517
               

               Cow position:
               chr14:25994305-25994492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               331-506
               

               Cow position:
               chr14:38722574-38722408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               153, 46
               

               Conread position:
               333-546
               

               Cow position:
               chr14:9500206-9500415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               335-506
               

               Cow position:
               chr14:32903930-32904094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               358-516
               

               Cow position:
               chr14:36420358-36420508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               360-506
               

               Cow position:
               chr14:38000079-37999940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               63-506
               

               Cow position:
               chr15:53712566-53713013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 211
               

               Conread position:
               65-507
               

               Cow position:
               chr15:23265514-23265951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 169
               

               Conread position:
               70-178
               

               Cow position:
               chr15:5912691-5912583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-230
               

               Cow position:
               chr15:35041819-35041982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-290
               

               Cow position:
               chr15:40065671-40065907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               70-410
               

               Cow position:
               chr15:9072424-9072778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 322
               

               Conread position:
               70-506
               

               Cow position:
               chr15:17641940-17642374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 165
               

               Conread position:
               70-506
               

               Cow position:
               chr15:25683425-25683873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 319
               

               Conread position:
               70-506
               

               Cow position:
               chr15:37470229-37469784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               70-506
               

               Cow position:
               chr15:37633089-37633540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               70-542
               

               Cow position:
               chr15:44797549-44797052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 330
               

               Conread position:
               71-326
               

               Cow position:
               chr15:31918232-31917985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               73-506
               

               Cow position:
               chr15:52868567-52868993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 151
               

               Conread position:
               75-506
               

               Cow position:
               chr15:11997476-11997932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               80-506
               

               Cow position:
               chr15:18403680-18404092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 118
               

               Conread position:
               83-425
               

               Cow position:
               chr15:37491947-37491609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               84-506
               

               Cow position:
               chr15:6523682-6523268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               84-506
               

               Cow position:
               chr15:53728526-53728103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               106-303
               

               Cow position:
               chr15:4721307-4721503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 132
               

               Conread position:
               108-471
               

               Cow position:
               chr15:27972005-27971638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               78, 217
               

               Conread position:
               109-343
               

               Cow position:
               chr15:50243089-50243327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               110-506
               

               Cow position:
               chr15:30569931-30570316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 112
               

               Conread position:
               166-312
               

               Cow position:
               chr15:1992622-1992775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               198-443
               

               Cow position:
               chr15:35052317-35052078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               203-506
               

               Cow position:
               chr15:578926-579223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               208-433
               

               Cow position:
               chr15:31882918-31883138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               208-433
               

               Cow position:
               chr15:43233222-43232992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               208-472
               

               Cow position:
               chr15:26365298-26365556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               208-508
               

               Cow position:
               chr15:1887952-1888249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               209-509
               

               Cow position:
               chr15:2436995-2437280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               210-336
               

               Cow position:
               chr15:5912572-5912442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               210-485
               

               Cow position:
               chr15:38902576-38902309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               210-506
               

               Cow position:
               chr15:12048858-12048566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               210-506
               

               Cow position:
               chr15:16669551-16669248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               210-542
               

               Cow position:
               chr15:49271828-49272145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               212-506
               

               Cow position:
               chr15:10581296-10581584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               213-516
               

               Cow position:
               chr15:31855352-31855651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               214-472
               

               Cow position:
               chr15:41344177-41343924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               214-486
               

               Cow position:
               chr15:14811047-14810769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               214-517
               

               Cow position:
               chr15:19813610-19813314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               91, 43
               

               Conread position:
               217-511
               

               Cow position:
               chr15:36864666-36864376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               225-433
               

               Cow position:
               chr15:1233766-1233552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               225-433
               

               Cow position:
               chr15:1241116-1240902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               225-499
               

               Cow position:
               chr15:35042276-35042551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               252-432
               

               Cow position:
               chr15:3593520-3593340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               263-483
               

               Cow position:
               chr15:26866789-26866989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               278-504
               

               Cow position:
               chr15:12283120-12283338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               173, 99
               

               Conread position:
               281-505
               

               Cow position:
               chr15:16972189-16971973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               281-506
               

               Cow position:
               chr15:52131791-52132015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               284-506
               

               Cow position:
               chr15:21802504-21802715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               287-499
               

               Cow position:
               chr15:8630296-8630508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               289-500
               

               Cow position:
               chr15:9437459-9437667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               309-507
               

               Cow position:
               chr15:39809484-39809682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               312-497
               

               Cow position:
               chr15:36582575-36582393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               317-517
               

               Cow position:
               chr15:9428039-9427837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               326-542
               

               Cow position:
               chr15:11287394-11287171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               328-504
               

               Cow position:
               chr15:5912390-5912211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               345-516
               

               Cow position:
               chr15:40065906-40066073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               349-542
               

               Cow position:
               chr15:53335368-53335567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               67-214
               

               Cow position:
               chr16:2375948-2375799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               70-314
               

               Cow position:
               chr16:4856418-4856167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               70-375
               

               Cow position:
               chr16:14443980-14444286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 213
               

               Conread position:
               70-375
               

               Cow position:
               chr16:29204971-29204677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               189, 94
               

               Conread position:
               70-506
               

               Cow position:
               chr16:4295456-4295023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               70-506
               

               Cow position:
               chr16:41680699-41680256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 115
               

               Conread position:
               70-506
               

               Cow position:
               chr16:43850760-43850323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               70-508
               

               Cow position:
               chr16:16118525-16118967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 100
               

               Conread position:
               70-510
               

               Cow position:
               chr16:23035229-23034787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               70-515
               

               Cow position:
               chr16:15508998-15509447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 148
               

               Conread position:
               70-517
               

               Cow position:
               chr16:12243491-12243036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               71-322
               

               Cow position:
               chr16:36910974-36910710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               115, 210
               

               Conread position:
               71-406
               

               Cow position:
               chr16:53516560-53516224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               120, 51
               

               Conread position:
               71-432
               

               Cow position:
               chr16:11161483-11161819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               72-251
               

               Cow position:
               chr16:45551904-45552080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               72-374
               

               Cow position:
               chr16:17867411-17867110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               72-506
               

               Cow position:
               chr16:14799671-14799231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 35
               

               Conread position:
               74-334
               

               Cow position:
               chr16:19152777-19153047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 48
               

               Conread position:
               76-294
               

               Cow position:
               chr16:15734647-15734869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               76-506
               

               Cow position:
               chr16:22785968-22785539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 284
               

               Conread position:
               76-506
               

               Cow position:
               chr16:47781370-47781807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 191
               

               Conread position:
               80-506
               

               Cow position:
               chr16:13043900-13044352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 397
               

               Conread position:
               82-216
               

               Cow position:
               chr16:23747520-23747384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               88-446
               

               Cow position:
               chr16:47391127-47391479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               115-305
               

               Cow position:
               chr16:37442015-37441821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 12
               

               Conread position:
               115-320
               

               Cow position:
               chr16:2732026-2731820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               75, 7
               

               Conread position:
               116-383
               

               Cow position:
               chr16:5131641-5131362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               128-506
               

               Cow position:
               chr16:30572499-30572119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               138-454
               

               Cow position:
               chr16:42405995-42406320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               164-339
               

               Cow position:
               chr16:6031479-6031300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               181-506
               

               Cow position:
               chr16:48894640-48894320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               203-515
               

               Cow position:
               chr16:23301547-23301849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               242, 73
               

               Conread position:
               205-442
               

               Cow position:
               chr16:11597686-11597443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               207-447
               

               Cow position:
               chr16:55910168-55909924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 163
               

               Conread position:
               209-433
               

               Cow position:
               chr16:16608022-16608244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               209-441
               

               Cow position:
               chr16:17003647-17003875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 151
               

               Conread position:
               210-506
               

               Cow position:
               chr16:45057615-45057918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               213-438
               

               Cow position:
               chr16:45698703-45698480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 158
               

               Conread position:
               226-505
               

               Cow position:
               chr16:9703387-9703104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               251-506
               

               Cow position:
               chr16:2371548-2371301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               259-506
               

               Cow position:
               chr16:23878604-23878857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               260-503
               

               Cow position:
               chr16:52650259-52650017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               263-478
               

               Cow position:
               chr16:43741837-43741634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 5
               

               Conread position:
               290-506
               

               Cow position:
               chr16:56373587-56373377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               290-517
               

               Cow position:
               chr16:43850216-43850006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               297-493
               

               Cow position:
               chr16:48604491-48604305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               305-506
               

               Cow position:
               chr16:30109523-30109320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               135, 30
               

               Conread position:
               309-516
               

               Cow position:
               chr16:37508394-37508598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               313-516
               

               Cow position:
               chr16:2722734-2722530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 69
               

               Conread position:
               315-484
               

               Cow position:
               chr16:608569-608402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               315-501
               

               Cow position:
               chr16:14423217-14423404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               357-506
               

               Cow position:
               chr16:14084794-14084645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 11
               

               Conread position:
               357-506
               

               Cow position:
               chr16:32352474-32352621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               373-517
               

               Cow position:
               chr16:29204517-29204374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               375-517
               

               Cow position:
               chr16:31374535-31374392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               399-516
               

               Cow position:
               chr16:52813521-52813411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               61-506
               

               Cow position:
               chr17:1310155-1309714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 49
               

               Conread position:
               62-269
               

               Cow position:
               chr17:30329775-30329986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               69-218
               

               Cow position:
               chr17:36149213-36149366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               70-375
               

               Cow position:
               chr17:24608929-24609248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               70-459
               

               Cow position:
               chr17:25117077-25117472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               70-506
               

               Cow position:
               chr17:701514-701942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 52
               

               Conread position:
               70-506
               

               Cow position:
               chr17:28847551-28847101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               71-290
               

               Cow position:
               chr17:17501790-17501564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               71-329
               

               Cow position:
               chr17:13236589-13236325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               115, 81
               

               Conread position:
               73-484
               

               Cow position:
               chr17:30358398-30358014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               288
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               81-427
               

               Cow position:
               chr17:20208706-20208343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 86
               

               Conread position:
               84-252
               

               Cow position:
               chr17:403737-403907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               85-214
               

               Cow position:
               chr17:7210473-7210605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               109-506
               

               Cow position:
               chr17:32451524-32451109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 243
               

               Conread position:
               139-517
               

               Cow position:
               chr17:2735879-2736272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               184-506
               

               Cow position:
               chr17:19789638-19789334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               189-309
               

               Cow position:
               chr17:30180488-30180610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               194-402
               

               Cow position:
               chr17:67783-67575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               199-309
               

               Cow position:
               chr17:30180854-30180966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               199-309
               

               Cow position:
               chr17:30181210-30181322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               210-486
               

               Cow position:
               chr17:18417993-18417714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               48, 135
               

               Conread position:
               210-506
               

               Cow position:
               chr17:6980500-6980191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 105
               

               Conread position:
               213-512
               

               Cow position:
               chr17:27622658-27622361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               50, 87
               

               Conread position:
               214-506
               

               Cow position:
               chr17:12842511-12842814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               217-506
               

               Cow position:
               chr17:13703564-13703840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               225-506
               

               Cow position:
               chr17:7210888-7211158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               237-436
               

               Cow position:
               chr17:7683881-7684078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               270-506
               

               Cow position:
               chr17:3849041-3849275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 115
               

               Conread position:
               276-545
               

               Cow position:
               chr17:27623659-27623396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               291-517
               

               Cow position:
               chr17:11225517-11225739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               321-542
               

               Cow position:
               chr17:33271414-33271196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               132, 15
               

               Conread position:
               323-506
               

               Cow position:
               chr17:3223724-3223897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               330-506
               

               Cow position:
               chr17:15450868-15451045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 52
               

               Conread position:
               357-504
               

               Cow position:
               chr17:404254-404401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               392-506
               

               Cow position:
               chr17:26481252-26481369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               26-339
               

               Cow position:
               chr18:39468860-39468560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               204, 33
               

               Conread position:
               26-542
               

               Cow position:
               chr18:39475265-39474754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 33
               

               Conread position:
               70-296
               

               Cow position:
               chr18:8204566-8204796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               70-330
               

               Cow position:
               chr18:8170216-8170487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               116, 18
               

               Conread position:
               70-506
               

               Cow position:
               chr18:29224731-29225152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 99
               

               Conread position:
               72-221
               

               Cow position:
               chr18:21290971-21290815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               73-248
               

               Cow position:
               chr18:31393629-31393805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 105
               

               Conread position:
               80-341
               

               Cow position:
               chr18:48550035-48550298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               80-517
               

               Cow position:
               chr18:28085618-28086061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 238
               

               Conread position:
               87-444
               

               Cow position:
               chr18:35471749-35471393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 195
               

               Conread position:
               106-375
               

               Cow position:
               chr18:14480496-14480778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               108-506
               

               Cow position:
               chr18:1700667-1701056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 119
               

               Conread position:
               109-542
               

               Cow position:
               chr18:32860728-32861163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               124-356
               

               Cow position:
               chr18:23504511-23504265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               124-506
               

               Cow position:
               chr18:22433698-22433307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               124-515
               

               Cow position:
               chr18:53028793-53029188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               63, 220
               

               Conread position:
               126-520
               

               Cow position:
               chr18:22065269-22064878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 95
               

               Conread position:
               134-505
               

               Cow position:
               chr18:23316671-23316300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 135
               

               Conread position:
               147-499
               

               Cow position:
               chr18:25846910-25846567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               167-506
               

               Cow position:
               chr18:16259394-16259739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               208-421
               

               Cow position:
               chr18:37493232-37493445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               208-429
               

               Cow position:
               chr18:33896014-33896238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 172
               

               Conread position:
               208-442
               

               Cow position:
               chr18:17228083-17227846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               208-542
               

               Cow position:
               chr18:5060377-5060022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 227
               

               Conread position:
               209-432
               

               Cow position:
               chr18:54166228-54166000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               209-433
               

               Cow position:
               chr18:39740138-39740369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               210-542
               

               Cow position:
               chr18:50880661-50880997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 78
               

               Conread position:
               211-410
               

               Cow position:
               chr18:21290593-21290394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               214-371
               

               Cow position:
               chr18:26667334-26667482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               227-435
               

               Cow position:
               chr18:16539107-16539316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               249-506
               

               Cow position:
               chr18:19152600-19152845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               259-518
               

               Cow position:
               chr18:53047827-53047569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               260-517
               

               Cow position:
               chr18:24664210-24663963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               272-509
               

               Cow position:
               chr18:29081256-29081488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               319-506
               

               Cow position:
               chr18:21123234-21123048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               319-542
               

               Cow position:
               chr18:50242347-50242570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               341-517
               

               Cow position:
               chr18:49436661-49436834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               387-509
               

               Cow position:
               chr18:52870964-52871085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               390-506
               

               Cow position:
               chr18:36456395-36456512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               58-316
               

               Cow position:
               chr19:20700126-20700400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               62-373
               

               Cow position:
               chr19:426219-425911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               6, 122
               

               Conread position:
               70-320
               

               Cow position:
               chr19:36478954-36479201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               70-499
               

               Cow position:
               chr19:3082143-3082562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               70-506
               

               Cow position:
               chr19:30746466-30746915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 226
               

               Conread position:
               70-517
               

               Cow position:
               chr19:19242154-19242588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               71-375
               

               Cow position:
               chr19:33285243-33284927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 171
               

               Conread position:
               72-356
               

               Cow position:
               chr19:14534588-14534318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               75-327
               

               Cow position:
               chr19:4609924-4610168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               84-216
               

               Cow position:
               chr19:4600428-4600560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               108, 78
               

               Conread position:
               123-506
               

               Cow position:
               chr19:17439974-17439601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 67
               

               Conread position:
               123-506
               

               Cow position:
               chr19:30350111-30349735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               127-542
               

               Cow position:
               chr19:25846443-25846842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               136-517
               

               Cow position:
               chr19:30051881-30051504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               164-348
               

               Cow position:
               chr19:30452382-30452194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               202-506
               

               Cow position:
               chr19:30188600-30188286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               210-408
               

               Cow position:
               chr19:43806286-43806090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               210-486
               

               Cow position:
               chr19:51070679-51070406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 146
               

               Conread position:
               210-506
               

               Cow position:
               chr19:4600710-4601002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               213-508
               

               Cow position:
               chr19:49483955-49484251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               214-506
               

               Cow position:
               chr19:28560618-28560312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 160
               

               Conread position:
               216-517
               

               Cow position:
               chr19:22670648-22670353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               166, 35
               

               Conread position:
               258-517
               

               Cow position:
               chr19:6362532-6362793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               264-506
               

               Cow position:
               chr19:30880071-30880313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               283-517
               

               Cow position:
               chr19:4548380-4548147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               283-542
               

               Cow position:
               chr19:28606081-28605818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               288-438
               

               Cow position:
               chr19:33954974-33955122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               311-506
               

               Cow position:
               chr19:41504270-41504464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               312-506
               

               Cow position:
               chr19:47772326-47772515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               318-506
               

               Cow position:
               chr19:13448471-13448660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               122, 65
               

               Conread position:
               332-508
               

               Cow position:
               chr19:6478494-6478316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               343-468
               

               Cow position:
               chr19:50843607-50843729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               360-506
               

               Cow position:
               chr19:33590063-33590217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               387-499
               

               Cow position:
               chr19:30385144-30385262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               397-506
               

               Cow position:
               chr19:14534093-14533983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               62-494
               

               Cow position:
               chr2:7211854-7212292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 48
               

               Conread position:
               63-301
               

               Cow position:
               chr2:76055495-76055248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               123, 187
               

               Conread position:
               64-515
               

               Cow position:
               chr2:41490710-41491162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               70-210
               

               Cow position:
               chr2:66435354-66435492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 86
               

               Conread position:
               70-216
               

               Cow position:
               chr2:6292700-6292849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               70-216
               

               Cow position:
               chr2:50017512-50017368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               70-368
               

               Cow position:
               chr2:18249814-18249508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               70-373
               

               Cow position:
               chr2:64073619-64073935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               70-433
               

               Cow position:
               chr2:62674169-62673819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 123
               

               Conread position:
               70-465
               

               Cow position:
               chr2:71121096-71121483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               70-502
               

               Cow position:
               chr2:72598874-72599320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 226
               

               Conread position:
               70-506
               

               Cow position:
               chr2:31420076-31420503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               70-506
               

               Cow position:
               chr2:32393483-32393903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               70-547
               

               Cow position:
               chr2:77968432-77967960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 94
               

               Conread position:
               71-338
               

               Cow position:
               chr2:33825863-33825598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               189, 114
               

               Conread position:
               71-506
               

               Cow position:
               chr2:43345221-43344778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 311
               

               Conread position:
               72-502
               

               Cow position:
               chr2:21697661-21697217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 96
               

               Conread position:
               75-542
               

               Cow position:
               chr2:74388048-74387580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               80-346
               

               Cow position:
               chr2:31490318-31490582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               80-506
               

               Cow position:
               chr2:63288072-63287647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 197
               

               Conread position:
               80-517
               

               Cow position:
               chr2:33791400-33790963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 172
               

               Conread position:
               81-350
               

               Cow position:
               chr2:3296265-3296546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               69, 145
               

               Conread position:
               83-506
               

               Cow position:
               chr2:53716899-53716475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 221
               

               Conread position:
               90-504
               

               Cow position:
               chr2:3182412-3182009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               117-504
               

               Cow position:
               chr2:47746341-47746726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               73, 217
               

               Conread position:
               125-506
               

               Cow position:
               chr2:82828249-82827871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               128-517
               

               Cow position:
               chr2:14037585-14037200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               143-355
               

               Cow position:
               chr2:24884134-24884357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               164-406
               

               Cow position:
               chr2:37003460-37003707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 219
               

               Conread position:
               195-374
               

               Cow position:
               chr2:13048411-13048600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               201-430
               

               Cow position:
               chr2:4830615-4830384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               203-431
               

               Cow position:
               chr2:16123193-16122961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               203-442
               

               Cow position:
               chr2:3628276-3628031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 188
               

               Conread position:
               207-433
               

               Cow position:
               chr2:79075796-79075570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               208-437
               

               Cow position:
               chr2:11340945-11340716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               208-504
               

               Cow position:
               chr2:1287661-1287957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               208-509
               

               Cow position:
               chr2:74848056-74848374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               209-468
               

               Cow position:
               chr2:40680029-40680279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               209-508
               

               Cow position:
               chr2:9242922-9243210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               209-514
               

               Cow position:
               chr2:9043408-9043718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 167
               

               Conread position:
               210-476
               

               Cow position:
               chr2:42286283-42286019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 115
               

               Conread position:
               210-503
               

               Cow position:
               chr2:20281700-20282000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               211-506
               

               Cow position:
               chr2:7779264-7778979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               213-437
               

               Cow position:
               chr2:32406212-32405988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               213-542
               

               Cow position:
               chr2:4927851-4927529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               225-506
               

               Cow position:
               chr2:23062688-23062414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               227-515
               

               Cow position:
               chr2:56823108-56822814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               231-486
               

               Cow position:
               chr2:3544363-3544118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               231-505
               

               Cow position:
               chr2:57501466-57501737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               251-506
               

               Cow position:
               chr2:39411897-39412161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               7, 209
               

               Conread position:
               260-459
               

               Cow position:
               chr2:37955689-37955881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 53
               

               Conread position:
               268-516
               

               Cow position:
               chr2:80604059-80603811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               268-517
               

               Cow position:
               chr2:52347500-52347257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               285-506
               

               Cow position:
               chr2:18274376-18274156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               162, 21
               

               Conread position:
               287-517
               

               Cow position:
               chr2:7365929-7365702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               288-542
               

               Cow position:
               chr2:40370473-40370232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               298-506
               

               Cow position:
               chr2:62463693-62463484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               299-491
               

               Cow position:
               chr2:13684901-13685091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               299-542
               

               Cow position:
               chr2:52183256-52183495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 13
               

               Conread position:
               301-506
               

               Cow position:
               chr2:44983364-44983159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               311-506
               

               Cow position:
               chr2:46130617-46130423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               317-492
               

               Cow position:
               chr2:76055070-76054898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               319-539
               

               Cow position:
               chr2:5767721-5767508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               322-506
               

               Cow position:
               chr2:12777244-12777069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               325-517
               

               Cow position:
               chr2:38583594-38583401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               330-517
               

               Cow position:
               chr2:38806015-38805832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               332-542
               

               Cow position:
               chr2:3730445-3730655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 47
               

               Conread position:
               347-516
               

               Cow position:
               chr2:9709814-9709979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               57-264
               

               Cow position:
               chr20:20350893-20350682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 152
               

               Conread position:
               63-344
               

               Cow position:
               chr20:23422296-23422006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               5, 206
               

               Conread position:
               63-430
               

               Cow position:
               chr20:25293700-25294084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 275
               

               Conread position:
               70-214
               

               Cow position:
               chr20:21403017-21403162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 18
               

               Conread position:
               70-352
               

               Cow position:
               chr20:16585519-16585229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               70-375
               

               Cow position:
               chr20:17474672-17474351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               70-440
               

               Cow position:
               chr20:4851268-4851654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 256
               

               Conread position:
               70-484
               

               Cow position:
               chr20:27977597-27977174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 184
               

               Conread position:
               70-506
               

               Cow position:
               chr20:15147873-15147443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               70-506
               

               Cow position:
               chr20:22920055-22919603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               70-506
               

               Cow position:
               chr20:24280083-24280512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               70-506
               

               Cow position:
               chr20:35249477-35249034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               290
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               70-517
               

               Cow position:
               chr20:14864758-14864308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               81-504
               

               Cow position:
               chr20:13589040-13588601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 191
               

               Conread position:
               84-506
               

               Cow position:
               chr20:31563847-31563425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 130
               

               Conread position:
               110-465
               

               Cow position:
               chr20:36707305-36706948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               122-359
               

               Cow position:
               chr20:12119452-12119201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               123-408
               

               Cow position:
               chr20:25991924-25991620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 238
               

               Conread position:
               146-506
               

               Cow position:
               chr20:10722523-10722866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               148-406
               

               Cow position:
               chr20:26992960-26993226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 238
               

               Conread position:
               164-503
               

               Cow position:
               chr20:27844218-27844578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               201-433
               

               Cow position:
               chr20:22695075-22694847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               207-517
               

               Cow position:
               chr20:13790245-13790559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 212
               

               Conread position:
               208-496
               

               Cow position:
               chr20:22420541-22420258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               210-438
               

               Cow position:
               chr20:16788371-16788605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               225-506
               

               Cow position:
               chr20:9918735-9919025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 170
               

               Conread position:
               226-506
               

               Cow position:
               chr20:21002272-21001990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               237-506
               

               Cow position:
               chr20:5668506-5668226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               263-506
               

               Cow position:
               chr20:3377001-3376754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               268-523
               

               Cow position:
               chr20:21847586-21847335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 56
               

               Conread position:
               285-504
               

               Cow position:
               chr20:31098043-31098261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               286-515
               

               Cow position:
               chr20:20350454-20350232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               287-517
               

               Cow position:
               chr20:21415329-21415113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               293-506
               

               Cow position:
               chr20:23422020-23421807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               306-479
               

               Cow position:
               chr20:28617750-28617583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               312-504
               

               Cow position:
               chr20:30285726-30285915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               321-517
               

               Cow position:
               chr20:887285-887490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               332-506
               

               Cow position:
               chr20:7284237-7284409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               340-506
               

               Cow position:
               chr20:23400672-23400836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               387-506
               

               Cow position:
               chr20:20072116-20071993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               55-429
               

               Cow position:
               chr21:24972489-24972115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 170
               

               Conread position:
               67-483
               

               Cow position:
               chr21:1991416-1991839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               70-270
               

               Cow position:
               chr21:24944762-24944549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               70-360
               

               Cow position:
               chr21:16166507-16166205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               70-480
               

               Cow position:
               chr21:25018998-25019405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               70-503
               

               Cow position:
               chr21:37355814-37356226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               70-516
               

               Cow position:
               chr21:23399087-23399546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 244
               

               Conread position:
               70-516
               

               Cow position:
               chr21:45447722-45448160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 271
               

               Conread position:
               71-516
               

               Cow position:
               chr21:15543817-15543370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               72-346
               

               Cow position:
               chr21:6280424-6280707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               5, 191
               

               Conread position:
               81-375
               

               Cow position:
               chr21:8273405-8273094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               109-373
               

               Cow position:
               chr21:39765999-39766276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               78, 155
               

               Conread position:
               110-504
               

               Cow position:
               chr21:16678979-16679353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               116-459
               

               Cow position:
               chr21:5597332-5597669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 214
               

               Conread position:
               129-517
               

               Cow position:
               chr21:26632265-26631882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               130-472
               

               Cow position:
               chr21:40442422-40442074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 251
               

               Conread position:
               134-460
               

               Cow position:
               chr21:7724754-7724443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               165-472
               

               Cow position:
               chr21:37941272-37940967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               203-437
               

               Cow position:
               chr21:37341890-37341652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 176
               

               Conread position:
               207-430
               

               Cow position:
               chr21:20575496-20575275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 74
               

               Conread position:
               208-409
               

               Cow position:
               chr21:27089848-27089645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               208-477
               

               Cow position:
               chr21:3614312-3614569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               238, 49
               

               Conread position:
               209-374
               

               Cow position:
               chr21:32813866-32813697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               210-496
               

               Cow position:
               chr21:39075202-39074920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               210-506
               

               Cow position:
               chr21:22941658-22941945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               210-516
               

               Cow position:
               chr21:12756196-12756514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               210-517
               

               Cow position:
               chr21:26742227-26741945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               213-499
               

               Cow position:
               chr21:6667475-6667757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 168
               

               Conread position:
               242-431
               

               Cow position:
               chr21:30793964-30793770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               273-512
               

               Cow position:
               chr21:26579643-26579878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               174, 21
               

               Conread position:
               285-504
               

               Cow position:
               chr21:29644009-29643783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               292-515
               

               Cow position:
               chr21:28709125-28709360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               298-508
               

               Cow position:
               chr21:5994614-5994409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               311-499
               

               Cow position:
               chr21:30567588-30567398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               326-499
               

               Cow position:
               chr21:37282915-37283087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               343-504
               

               Cow position:
               chr21:42396391-42396549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 34
               

               Conread position:
               62-352
               

               Cow position:
               chr22:45291561-45291866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               69-487
               

               Cow position:
               chr22:25457908-25458331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 25
               

               Conread position:
               70-261
               

               Cow position:
               chr22:24335430-24335229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               70-321
               

               Cow position:
               chr22:45496641-45496900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               70-327
               

               Cow position:
               chr22:12628432-12628172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 197
               

               Conread position:
               70-352
               

               Cow position:
               chr22:28755435-28755149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               114, 35
               

               Conread position:
               70-410
               

               Cow position:
               chr22:14508519-14508181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               70-438
               

               Cow position:
               chr22:609869-609506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               76-516
               

               Cow position:
               chr22:32018560-32018115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               88-447
               

               Cow position:
               chr22:47385893-47385513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               98, 317
               

               Conread position:
               100-506
               

               Cow position:
               chr22:4057870-4058286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 287
               

               Conread position:
               109-506
               

               Cow position:
               chr22:7281319-7281722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 240
               

               Conread position:
               130-373
               

               Cow position:
               chr22:29005477-29005217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 171
               

               Conread position:
               160-517
               

               Cow position:
               chr22:44637730-44638092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               28, 164
               

               Conread position:
               191-444
               

               Cow position:
               chr22:39904636-39904385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               191-506
               

               Cow position:
               chr22:29064515-29064830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               206-433
               

               Cow position:
               chr22:14330241-14330473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               208-430
               

               Cow position:
               chr22:40853351-40853566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               208-437
               

               Cow position:
               chr22:20912363-20912135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               209-437
               

               Cow position:
               chr22:6014244-6014014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               209-517
               

               Cow position:
               chr22:45327342-45327663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               210-476
               

               Cow position:
               chr22:246515-246777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               210-515
               

               Cow position:
               chr22:8714080-8714374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               213-491
               

               Cow position:
               chr22:26787526-26787240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               218-506
               

               Cow position:
               chr22:15873524-15873796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               219-506
               

               Cow position:
               chr22:12537372-12537086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               223-424
               

               Cow position:
               chr22:5715081-5714880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               237-517
               

               Cow position:
               chr22:15890141-15890417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 155
               

               Conread position:
               265-506
               

               Cow position:
               chr22:13083300-13083526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               267-506
               

               Cow position:
               chr22:41321565-41321801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               271-515
               

               Cow position:
               chr22:4932154-4932403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               279-515
               

               Cow position:
               chr22:44037453-44037690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               281-446
               

               Cow position:
               chr22:34087254-34087093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               310-465
               

               Cow position:
               chr22:45787904-45787752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               320-506
               

               Cow position:
               chr22:12627964-12627780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               328-517
               

               Cow position:
               chr22:45497032-45497225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               63-246
               

               Cow position:
               chr23:15694424-15694607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               123, 31
               

               Conread position:
               63-370
               

               Cow position:
               chr23:25079119-25078811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 62
               

               Conread position:
               63-506
               

               Cow position:
               chr23:16170771-16171229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 328
               

               Conread position:
               70-506
               

               Cow position:
               chr23:25408904-25409335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               71-367
               

               Cow position:
               chr23:5265440-5265142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               84-368
               

               Cow position:
               chr23:30127885-30127583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               84-506
               

               Cow position:
               chr23:9546469-9546902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 298
               

               Conread position:
               103-369
               

               Cow position:
               chr23:7253188-7253459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 233
               

               Conread position:
               106-517
               

               Cow position:
               chr23:39070115-39069695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 214
               

               Conread position:
               112-361
               

               Cow position:
               chr23:30572702-30572451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               125-506
               

               Cow position:
               chr23:36674645-36674266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               126-516
               

               Cow position:
               chr23:24401082-24400664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               131-373
               

               Cow position:
               chr23:9724893-9724655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               164-504
               

               Cow position:
               chr23:23917036-23917383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 182
               

               Conread position:
               175-447
               

               Cow position:
               chr23:6964169-6963904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               180-431
               

               Cow position:
               chr23:38026504-38026251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               207-431
               

               Cow position:
               chr23:5418558-5418784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               211-437
               

               Cow position:
               chr23:36217574-36217347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               225-517
               

               Cow position:
               chr23:30302181-30301882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               258-468
               

               Cow position:
               chr23:1250837-1250636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               262-506
               

               Cow position:
               chr23:16479638-16479392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               42, 6
               

               Conread position:
               272-438
               

               Cow position:
               chr23:19913807-19913646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               272-542
               

               Cow position:
               chr23:5258621-5258879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               273-506
               

               Cow position:
               chr23:15147721-15147492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               290-503
               

               Cow position:
               chr23:9654534-9654322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               329-506
               

               Cow position:
               chr23:36484088-36483918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               341-483
               

               Cow position:
               chr23:34514541-34514394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               363-517
               

               Cow position:
               chr23:15694244-15694087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               375-517
               

               Cow position:
               chr23:9425830-9425688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               390-506
               

               Cow position:
               chr23:32869397-32869279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               55-508
               

               Cow position:
               chr24:38643643-38644111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               63-359
               

               Cow position:
               chr24:7038801-7039101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               125, 47
               

               Conread position:
               63-453
               

               Cow position:
               chr24:19961478-19961087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               5, 60
               

               Conread position:
               65-216
               

               Cow position:
               chr24:6665402-6665248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               67-506
               

               Cow position:
               chr24:43351055-43350613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 254
               

               Conread position:
               70-255
               

               Cow position:
               chr24:36853368-36853563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               70-323
               

               Cow position:
               chr24:19627375-19627636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               70-399
               

               Cow position:
               chr24:25343107-25343439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               117, 62
               

               Conread position:
               70-506
               

               Cow position:
               chr24:6424008-6423580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 48
               

               Conread position:
               70-506
               

               Cow position:
               chr24:37386302-37385885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               70-506
               

               Cow position:
               chr24:42817305-42817753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 128
               

               Conread position:
               70-516
               

               Cow position:
               chr24:14913516-14913086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               70-542
               

               Cow position:
               chr24:17763218-17762745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               72-506
               

               Cow position:
               chr24:6177443-6177885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 294
               

               Conread position:
               75-459
               

               Cow position:
               chr24:25246087-25246473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 48
               

               Conread position:
               83-337
               

               Cow position:
               chr24:43492448-43492195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               103, 38
               

               Conread position:
               85-324
               

               Cow position:
               chr24:12234246-12234002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               87-502
               

               Cow position:
               chr24:31301597-31301197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 180
               

               Conread position:
               114-372
               

               Cow position:
               chr24:36551267-36551004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 157
               

               Conread position:
               115-488
               

               Cow position:
               chr24:41405227-41404863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               124-339
               

               Cow position:
               chr24:25934504-25934724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 135
               

               Conread position:
               131-506
               

               Cow position:
               chr24:9867370-9866988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 151
               

               Conread position:
               134-504
               

               Cow position:
               chr24:35835909-35835550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               138-521
               

               Cow position:
               chr24:32579293-32579689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               164-432
               

               Cow position:
               chr24:15474832-15475100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               166-506
               

               Cow position:
               chr24:17417219-17417576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 207
               

               Conread position:
               205-542
               

               Cow position:
               chr24:30899638-30899297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               208-453
               

               Cow position:
               chr24:22839420-22839176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 179
               

               Conread position:
               208-517
               

               Cow position:
               chr24:13238265-13238580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               211-542
               

               Cow position:
               chr24:31845624-31845295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               248-506
               

               Cow position:
               chr24:21714971-21714714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               253-517
               

               Cow position:
               chr24:36853592-36853843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               281-506
               

               Cow position:
               chr24:33274122-33274339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               287-503
               

               Cow position:
               chr24:36097734-36097945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               299-506
               

               Cow position:
               chr24:1295979-1295779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               152, 39
               

               Conread position:
               311-506
               

               Cow position:
               chr24:19627710-19627908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               312-503
               

               Cow position:
               chr24:36098886-36098701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               341-496
               

               Cow position:
               chr24:620883-621037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               375-503
               

               Cow position:
               chr24:25934910-25935040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               63-288
               

               Cow position:
               chr25:35038581-35038346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 152
               

               Conread position:
               70-289
               

               Cow position:
               chr25:30035617-30035830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               70-307
               

               Cow position:
               chr25:18644007-18643753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 221
               

               Conread position:
               70-452
               

               Cow position:
               chr25:5567697-5567301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 327
               

               Conread position:
               70-506
               

               Cow position:
               chr25:16240531-16240118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               70-517
               

               Cow position:
               chr25:18206236-18205801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 214
               

               Conread position:
               75-230
               

               Cow position:
               chr25:10013360-10013204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               80-282
               

               Cow position:
               chr25:14279345-14279544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               107, 40
               

               Conread position:
               106-517
               

               Cow position:
               chr25:36235714-36235309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 119
               

               Conread position:
               135-504
               

               Cow position:
               chr25:33924831-33925203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 227
               

               Conread position:
               160-506
               

               Cow position:
               chr25:13123366-13123723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 230
               

               Conread position:
               167-506
               

               Cow position:
               chr25:23014320-23014665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               175-505
               

               Cow position:
               chr25:13704175-13704516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               191-542
               

               Cow position:
               chr25:19686564-19686207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 191
               

               Conread position:
               202-542
               

               Cow position:
               chr25:17472866-17473203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               209-433
               

               Cow position:
               chr25:18262541-18262319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               210-506
               

               Cow position:
               chr25:16940650-16940350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               210-518
               

               Cow position:
               chr25:16193319-16193018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               214-484
               

               Cow position:
               chr25:8618193-8617933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               266-506
               

               Cow position:
               chr25:23559628-23559388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 104
               

               Conread position:
               272-517
               

               Cow position:
               chr25:20180743-20180982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               283-506
               

               Cow position:
               chr25:14279729-14279941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               284-474
               

               Cow position:
               chr25:5377356-5377167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               285-516
               

               Cow position:
               chr25:30036035-30036264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 54
               

               Conread position:
               315-517
               

               Cow position:
               chr25:33345962-33346154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               327-542
               

               Cow position:
               chr25:40833106-40832887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               343-516
               

               Cow position:
               chr25:35038088-35037922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               58-332
               

               Cow position:
               chr26:15558578-15558846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               131, 55
               

               Conread position:
               70-217
               

               Cow position:
               chr26:15938924-15939072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               116, 45
               

               Conread position:
               70-309
               

               Cow position:
               chr26:12871473-12871727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               84, 251
               

               Conread position:
               70-339
               

               Cow position:
               chr26:22161777-22161495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               114, 268
               

               Conread position:
               70-375
               

               Cow position:
               chr26:4560163-4559860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               70-506
               

               Cow position:
               chr26:14509763-14509326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               70-506
               

               Cow position:
               chr26:15632572-15633000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 135
               

               Conread position:
               70-506
               

               Cow position:
               chr26:28421676-28421233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               71-506
               

               Cow position:
               chr26:30603016-30602585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 26
               

               Conread position:
               91-506
               

               Cow position:
               chr26:4663983-4663570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               109-506
               

               Cow position:
               chr26:16214383-16214787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               115-293
               

               Cow position:
               chr26:34089810-34089994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               124-347
               

               Cow position:
               chr26:19492900-19493130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 178
               

               Conread position:
               175-369
               

               Cow position:
               chr26:30011619-30011434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               189-453
               

               Cow position:
               chr26:3311696-3311430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               191-494
               

               Cow position:
               chr26:21013574-21013876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               208-433
               

               Cow position:
               chr26:16510721-16510948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               209-442
               

               Cow position:
               chr26:19791187-19790949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               6, 175
               

               Conread position:
               210-502
               

               Cow position:
               chr26:33214591-33214304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               254-508
               

               Cow position:
               chr26:14081659-14081903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               255-506
               

               Cow position:
               chr26:34037967-34037709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               260-446
               

               Cow position:
               chr26:4651045-4651225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               268-504
               

               Cow position:
               chr26:5718062-5717824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               38, 128
               

               Conread position:
               279-506
               

               Cow position:
               chr26:6828279-6828505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               287-517
               

               Cow position:
               chr26:28864716-28864481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               309-453
               

               Cow position:
               chr26:12070095-12070236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               319-505
               

               Cow position:
               chr26:19958175-19958362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               63-506
               

               Cow position:
               chr27:9261725-9261265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 217
               

               Conread position:
               63-516
               

               Cow position:
               chr27:3934789-3935264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 335
               

               Conread position:
               70-200
               

               Cow position:
               chr27:5530638-5530506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               70-506
               

               Cow position:
               chr27:30889008-30889440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               71-496
               

               Cow position:
               chr27:26091516-26091951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 209
               

               Conread position:
               71-517
               

               Cow position:
               chr27:31238070-31238543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               63, 342
               

               Conread position:
               106-506
               

               Cow position:
               chr27:11935553-11935140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               127-483
               

               Cow position:
               chr27:13860777-13861108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 60
               

               Conread position:
               191-545
               

               Cow position:
               chr27:17564799-17564441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               203-433
               

               Cow position:
               chr27:16099947-16100181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 129
               

               Conread position:
               207-539
               

               Cow position:
               chr27:4962398-4962723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               208-480
               

               Cow position:
               chr27:9918078-9917815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               208-498
               

               Cow position:
               chr27:11755732-11756010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               208-506
               

               Cow position:
               chr27:2246743-2246452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 173
               

               Conread position:
               214-509
               

               Cow position:
               chr27:29611291-29610997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               218-431
               

               Cow position:
               chr27:26653337-26653123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               231-433
               

               Cow position:
               chr27:5261549-5261348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               249-506
               

               Cow position:
               chr27:18589446-18589191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               263-517
               

               Cow position:
               chr27:18057195-18056941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               268-489
               

               Cow position:
               chr27:4449640-4449856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               268-504
               

               Cow position:
               chr27:6534374-6534609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               275-506
               

               Cow position:
               chr27:11021435-11021215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               298-468
               

               Cow position:
               chr27:280959-281135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               303-506
               

               Cow position:
               chr27:15211413-15211204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               325-506
               

               Cow position:
               chr27:7860135-7860318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               351-504
               

               Cow position:
               chr27:12547762-12547917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               62-257
               

               Cow position:
               chr28:6277485-6277281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               62-273
               

               Cow position:
               chr28:7607300-7607515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               63-506
               

               Cow position:
               chr28:34347184-34346740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               70-350
               

               Cow position:
               chr28:22855367-22855649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               70-425
               

               Cow position:
               chr28:28630647-28631009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 162
               

               Conread position:
               70-517
               

               Cow position:
               chr28:2340611-2341068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               71-347
               

               Cow position:
               chr28:22830000-22830284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 63
               

               Conread position:
               72-294
               

               Cow position:
               chr28:15915174-15914944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 45
               

               Conread position:
               75-364
               

               Cow position:
               chr28:22360714-22361018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               80-482
               

               Cow position:
               chr28:23390416-23390827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 58
               

               Conread position:
               80-507
               

               Cow position:
               chr28:34117172-34117610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 82
               

               Conread position:
               124-465
               

               Cow position:
               chr28:16805353-16805004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 254
               

               Conread position:
               140-499
               

               Cow position:
               chr28:15349604-15349961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 109
               

               Conread position:
               171-517
               

               Cow position:
               chr28:24468206-24468568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 168
               

               Conread position:
               191-506
               

               Cow position:
               chr28:26626973-26626673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               208-437
               

               Cow position:
               chr28:25315093-25315322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               208-444
               

               Cow position:
               chr28:11690305-11690071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               208-461
               

               Cow position:
               chr28:480511-480260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               208-483
               

               Cow position:
               chr28:17762563-17762838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               208-508
               

               Cow position:
               chr28:10647866-10647575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               208-517
               

               Cow position:
               chr28:32284783-32284475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 178
               

               Conread position:
               209-543
               

               Cow position:
               chr28:6355290-6355623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               210-487
               

               Cow position:
               chr28:11379579-11379291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               61, 173
               

               Conread position:
               213-435
               

               Cow position:
               chr28:11783804-11783585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               224-518
               

               Cow position:
               chr28:31994422-31994117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               245-488
               

               Cow position:
               chr28:6277259-6277024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               263-546
               

               Cow position:
               chr28:17482664-17482402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               268, 45
               

               Conread position:
               267-438
               

               Cow position:
               chr28:3803135-3803307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               273-517
               

               Cow position:
               chr28:5912560-5912321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               281-433
               

               Cow position:
               chr28:8687235-8687087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               290-508
               

               Cow position:
               chr28:17598726-17598501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               325-517
               

               Cow position:
               chr28:3898377-3898571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 59
               

               Conread position:
               332-506
               

               Cow position:
               chr28:20095215-20095394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               67-238
               

               Cow position:
               chr29:30921625-30921444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               70-450
               

               Cow position:
               chr29:37207831-37208226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               70-504
               

               Cow position:
               chr29:18338475-18338043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               70-506
               

               Cow position:
               chr29:2481272-2480840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 69
               

               Conread position:
               70-506
               

               Cow position:
               chr29:16359688-16360125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 320
               

               Conread position:
               70-506
               

               Cow position:
               chr29:22454759-22454324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               70-517
               

               Cow position:
               chr29:8906598-8907040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 99
               

               Conread position:
               72-383
               

               Cow position:
               chr29:28115152-28115480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               80-476
               

               Cow position:
               chr29:19931408-19931815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               81-462
               

               Cow position:
               chr29:13040461-13040089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               8, 239
               

               Conread position:
               83-471
               

               Cow position:
               chr29:21198570-21198171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 313
               

               Conread position:
               86-542
               

               Cow position:
               chr29:7738613-7738149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 68
               

               Conread position:
               87-506
               

               Cow position:
               chr29:35036812-35037240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               108-407
               

               Cow position:
               chr29:30813546-30813850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 258
               

               Conread position:
               133-537
               

               Cow position:
               chr29:4458723-4459136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               167-489
               

               Cow position:
               chr29:3346129-3346455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               192-375
               

               Cow position:
               chr29:9339517-9339692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               199-433
               

               Cow position:
               chr29:34848780-34849026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               203-509
               

               Cow position:
               chr29:2848215-2847908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               206-542
               

               Cow position:
               chr29:8891048-8890717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               207-438
               

               Cow position:
               chr29:15919771-15920003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               209-507
               

               Cow position:
               chr29:23988704-23989004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               213-508
               

               Cow position:
               chr29:7959606-7959321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               272-494
               

               Cow position:
               chr29:34330963-34330730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               291-517
               

               Cow position:
               chr29:12193470-12193685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 40
               

               Conread position:
               302-499
               

               Cow position:
               chr29:44028102-44028295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               328-518
               

               Cow position:
               chr29:7892632-7892442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               341-506
               

               Cow position:
               chr29:682187-682029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               341-511
               

               Cow position:
               chr29:5174331-5174501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               378-517
               

               Cow position:
               chr29:24442943-24442804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               62-415
               

               Cow position:
               chr3:55460462-55460108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 29
               

               Conread position:
               62-506
               

               Cow position:
               chr3:56042686-56042247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 57
               

               Conread position:
               65-504
               

               Cow position:
               chr3:23478267-23478707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 197
               

               Conread position:
               70-215
               

               Cow position:
               chr3:25062206-25062061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-215
               

               Cow position:
               chr3:42489256-42489108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-215
               

               Cow position:
               chr3:45735184-45735330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               70-230
               

               Cow position:
               chr3:74849005-74848842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               70-247
               

               Cow position:
               chr3:24356794-24356971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               70-475
               

               Cow position:
               chr3:77157374-77157759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               70-516
               

               Cow position:
               chr3:27633969-27633517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 204
               

               Conread position:
               70-516
               

               Cow position:
               chr3:84153363-84153794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               198, 51
               

               Conread position:
               70-517
               

               Cow position:
               chr3:24531868-24532309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 33
               

               Conread position:
               72-471
               

               Cow position:
               chr3:80928895-80928480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               72-515
               

               Cow position:
               chr3:77467995-77468446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 117
               

               Conread position:
               72-518
               

               Cow position:
               chr3:1549326-1549804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 114
               

               Conread position:
               75-504
               

               Cow position:
               chr3:60854800-60854364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               75-506
               

               Cow position:
               chr3:32773252-32773675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 184
               

               Conread position:
               76-390
               

               Cow position:
               chr3:36538887-36538558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 76
               

               Conread position:
               80-373
               

               Cow position:
               chr3:31287054-31286778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               184, 107
               

               Conread position:
               81-217
               

               Cow position:
               chr3:19689589-19689454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               84-249
               

               Cow position:
               chr3:3690669-3690497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               84-375
               

               Cow position:
               chr3:56711591-56711283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               86-468
               

               Cow position:
               chr3:16115638-16115990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 176
               

               Conread position:
               106-547
               

               Cow position:
               chr3:75281475-75281031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               109-231
               

               Cow position:
               chr3:27347247-27347123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               109-506
               

               Cow position:
               chr3:8753534-8753934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               109-506
               

               Cow position:
               chr3:21332723-21332334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 78
               

               Conread position:
               124-504
               

               Cow position:
               chr3:26581973-26581594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               133-506
               

               Cow position:
               chr3:85085963-85086326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               141-444
               

               Cow position:
               chr3:8275553-8275863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               164-360
               

               Cow position:
               chr3:56161159-56161347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               179-506
               

               Cow position:
               chr3:43967273-43966936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 205
               

               Conread position:
               191-506
               

               Cow position:
               chr3:23274813-23274492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               193-500
               

               Cow position:
               chr3:17519635-17519318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 196
               

               Conread position:
               200-506
               

               Cow position:
               chr3:79315353-79315662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               203-517
               

               Cow position:
               chr3:35029240-35028915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               205-489
               

               Cow position:
               chr3:50499761-50500034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               208-506
               

               Cow position:
               chr3:47497710-47497995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               209-433
               

               Cow position:
               chr3:33468603-33468376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 180
               

               Conread position:
               209-434
               

               Cow position:
               chr3:40269369-40269150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               211-401
               

               Cow position:
               chr3:27879792-27879606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               213-517
               

               Cow position:
               chr3:55107225-55106929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               214-499
               

               Cow position:
               chr3:65392244-65392543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               215-438
               

               Cow position:
               chr3:73826957-73827181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               219-506
               

               Cow position:
               chr3:60948001-60947718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               221-506
               

               Cow position:
               chr3:12311271-12311557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               226-505
               

               Cow position:
               chr3:74846531-74846253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               229-442
               

               Cow position:
               chr3:16622123-16621905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               237-542
               

               Cow position:
               chr3:9420030-9419719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               244-516
               

               Cow position:
               chr3:56163981-56164252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               258-515
               

               Cow position:
               chr3:45641737-45641979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               263-433
               

               Cow position:
               chr3:15329489-15329319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               263-506
               

               Cow position:
               chr3:3690456-3690221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 5
               

               Conread position:
               268-506
               

               Cow position:
               chr3:12531871-12531639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               273-517
               

               Cow position:
               chr3:68127344-68127577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               286-517
               

               Cow position:
               chr3:27347103-27346871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               288-506
               

               Cow position:
               chr3:2284951-2285166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               289-506
               

               Cow position:
               chr3:78442626-78442407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               290-517
               

               Cow position:
               chr3:22054358-22054148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               299-506
               

               Cow position:
               chr3:39385826-39385625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               175, 61
               

               Conread position:
               303-504
               

               Cow position:
               chr3:64081743-64081942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               307-506
               

               Cow position:
               chr3:73418335-73418533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               315-506
               

               Cow position:
               chr3:13526919-13527102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               328-506
               

               Cow position:
               chr3:6798693-6798519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               328-506
               

               Cow position:
               chr3:73154259-73154430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               332-506
               

               Cow position:
               chr3:74724135-74723959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               334-506
               

               Cow position:
               chr3:43004497-43004323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               336-506
               

               Cow position:
               chr3:77589704-77589863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               381-505
               

               Cow position:
               chr3:27879575-27879450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               57-339
               

               Cow position:
               chr4:31586779-31586488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               63-331
               

               Cow position:
               chr4:8597639-8597360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               63-506
               

               Cow position:
               chr4:20925928-20925520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               70-179
               

               Cow position:
               chr4:49884939-49884830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-241
               

               Cow position:
               chr4:45114546-45114373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               70-252
               

               Cow position:
               chr4:57652301-57652484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 172
               

               Conread position:
               70-352
               

               Cow position:
               chr4:29222462-29222170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 169
               

               Conread position:
               70-367
               

               Cow position:
               chr4:17176210-17176506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 142
               

               Conread position:
               70-372
               

               Cow position:
               chr4:4300590-4300904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               70-499
               

               Cow position:
               chr4:53641382-53641802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 234
               

               Conread position:
               70-504
               

               Cow position:
               chr4:21162724-21163143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 52
               

               Conread position:
               70-506
               

               Cow position:
               chr4:5188951-5188513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               70-506
               

               Cow position:
               chr4:29067583-29067148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 103
               

               Conread position:
               70-506
               

               Cow position:
               chr4:41975655-41975226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 184
               

               Conread position:
               70-534
               

               Cow position:
               chr4:39646731-39647190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               71-369
               

               Cow position:
               chr4:27443894-27444205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               71-506
               

               Cow position:
               chr4:34043566-34043106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 198
               

               Conread position:
               72-364
               

               Cow position:
               chr4:58833155-58832856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               119, 56
               

               Conread position:
               82-453
               

               Cow position:
               chr4:59565606-59565996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 199
               

               Conread position:
               82-500
               

               Cow position:
               chr4:9822218-9822646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               94-355
               

               Cow position:
               chr4:9127784-9128047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               97-322
               

               Cow position:
               chr4:60159625-60159387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               106-476
               

               Cow position:
               chr4:46875428-46875030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               108-324
               

               Cow position:
               chr4:51905262-51905481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 150
               

               Conread position:
               108-502
               

               Cow position:
               chr4:57222128-57221725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 240
               

               Conread position:
               109-452
               

               Cow position:
               chr4:6793459-6793805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               110-506
               

               Cow position:
               chr4:47511123-47511525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 134
               

               Conread position:
               164-299
               

               Cow position:
               chr4:49884623-49884480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               164-506
               

               Cow position:
               chr4:57566060-57565723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               190-441
               

               Cow position:
               chr4:45113089-45112848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               204-425
               

               Cow position:
               chr4:12682804-12682590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               208-403
               

               Cow position:
               chr4:11175970-11176159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               208-488
               

               Cow position:
               chr4:2238032-2237760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               208-505
               

               Cow position:
               chr4:10722607-10722901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               208-506
               

               Cow position:
               chr4:58873455-58873740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               208-506
               

               Cow position:
               chr4:68107161-68106864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 170
               

               Conread position:
               209-470
               

               Cow position:
               chr4:13920209-13919958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               210-489
               

               Cow position:
               chr4:58856310-58856028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               210-517
               

               Cow position:
               chr4:58432763-58432459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               211-506
               

               Cow position:
               chr4:49741771-49742059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 95
               

               Conread position:
               213-508
               

               Cow position:
               chr4:47087198-47086917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               230-542
               

               Cow position:
               chr4:27505345-27505652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               31, 104
               

               Conread position:
               237-433
               

               Cow position:
               chr4:13926428-13926238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               240-504
               

               Cow position:
               chr4:5783956-5784208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               251-505
               

               Cow position:
               chr4:7655015-7655262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               131, 111
               

               Conread position:
               252-508
               

               Cow position:
               chr4:20311916-20312166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 126
               

               Conread position:
               257-433
               

               Cow position:
               chr4:9106289-9106459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               258-502
               

               Cow position:
               chr4:22507129-22506888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               261-516
               

               Cow position:
               chr4:36759523-36759789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               267-496
               

               Cow position:
               chr4:24713398-24713166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               269-488
               

               Cow position:
               chr4:27228724-27228951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               278-506
               

               Cow position:
               chr4:2443623-2443397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               288-518
               

               Cow position:
               chr4:15283465-15283687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               291-506
               

               Cow position:
               chr4:31003075-31002860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               291-506
               

               Cow position:
               chr4:57652493-57652706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               306-506
               

               Cow position:
               chr4:49881711-49881491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               311-506
               

               Cow position:
               chr4:51905573-51905769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               138, 71
               

               Conread position:
               312-542
               

               Cow position:
               chr4:25924655-25924429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               315-506
               

               Cow position:
               chr4:6630017-6629831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               321-502
               

               Cow position:
               chr4:62407473-62407646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               321-506
               

               Cow position:
               chr4:31586286-31586110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               331-517
               

               Cow position:
               chr4:5886662-5886841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               333-516
               

               Cow position:
               chr4:54347527-54347708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               337-475
               

               Cow position:
               chr4:1059352-1059216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               62-309
               

               Cow position:
               chr5:10786151-10785882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               62-516
               

               Cow position:
               chr5:26562234-26562676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               67-504
               

               Cow position:
               chr5:29431559-29431140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               67-506
               

               Cow position:
               chr5:15882375-15881925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 321
               

               Conread position:
               70-337
               

               Cow position:
               chr5:54156794-54157065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               70-503
               

               Cow position:
               chr5:37048145-37048570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-506
               

               Cow position:
               chr5:27492790-27493263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 348
               

               Conread position:
               70-506
               

               Cow position:
               chr5:34483438-34483017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               70-506
               

               Cow position:
               chr5:60968503-60968966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 327
               

               Conread position:
               70-517
               

               Cow position:
               chr5:21146136-21145691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               71-235
               

               Cow position:
               chr5:25927599-25927436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               72-517
               

               Cow position:
               chr5:45912202-45911767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               73-212
               

               Cow position:
               chr5:23753124-23752981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               73-506
               

               Cow position:
               chr5:57127538-57127978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 317
               

               Conread position:
               75-375
               

               Cow position:
               chr5:9233283-9232976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 188
               

               Conread position:
               83-495
               

               Cow position:
               chr5:51076537-51076104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 307
               

               Conread position:
               84-541
               

               Cow position:
               chr5:23234576-23235031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               85-331
               

               Cow position:
               chr5:21166950-21166693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 147
               

               Conread position:
               86-344
               

               Cow position:
               chr5:31550726-31550983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               96-322
               

               Cow position:
               chr5:62863952-62863736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               106-506
               

               Cow position:
               chr5:56741790-56742181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 89
               

               Conread position:
               124-266
               

               Cow position:
               chr5:34168311-34168458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 142
               

               Conread position:
               124-339
               

               Cow position:
               chr5:60725183-60725398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 139
               

               Conread position:
               124-419
               

               Cow position:
               chr5:10455506-10455804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               133-467
               

               Cow position:
               chr5:76122763-76122429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               134-506
               

               Cow position:
               chr5:13575612-13575224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               138-387
               

               Cow position:
               chr5:67577115-67577361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               145-307
               

               Cow position:
               chr5:9025123-9025288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               148-348
               

               Cow position:
               chr5:33564034-33564237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               148-514
               

               Cow position:
               chr5:9585567-9585215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               156-416
               

               Cow position:
               chr5:62579978-62580241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 202
               

               Conread position:
               195-506
               

               Cow position:
               chr5:56109943-56109626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               201-453
               

               Cow position:
               chr5:53599832-53599577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               201-506
               

               Cow position:
               chr5:51953093-51953404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               201-515
               

               Cow position:
               chr5:51360866-51361162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               207-433
               

               Cow position:
               chr5:31784836-31785056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               207-438
               

               Cow position:
               chr5:55985588-55985355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               208-433
               

               Cow position:
               chr5:57733511-57733739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 170
               

               Conread position:
               208-471
               

               Cow position:
               chr5:25925644-25925379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               208-478
               

               Cow position:
               chr5:57965065-57964809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               208-488
               

               Cow position:
               chr5:48224053-48223788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               208-517
               

               Cow position:
               chr5:38274000-38274321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               210-401
               

               Cow position:
               chr5:38911300-38911491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               210-468
               

               Cow position:
               chr5:26161749-26161509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               210-506
               

               Cow position:
               chr5:26098436-26098152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               211-348
               

               Cow position:
               chr5:73051355-73051500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               213-437
               

               Cow position:
               chr5:50770411-50770187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               213-517
               

               Cow position:
               chr5:35583867-35584162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 149
               

               Conread position:
               218-507
               

               Cow position:
               chr5:72755296-72755577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               219-517
               

               Cow position:
               chr5:11235821-11236117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               222-429
               

               Cow position:
               chr5:6149783-6149573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               43, 158
               

               Conread position:
               227-504
               

               Cow position:
               chr5:14072324-14072058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               260-506
               

               Cow position:
               chr5:67463499-67463740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               152, 41
               

               Conread position:
               260-516
               

               Cow position:
               chr5:35748823-35749071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               263-506
               

               Cow position:
               chr5:12329408-12329164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               265-506
               

               Cow position:
               chr5:71278942-71279183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               172, 50
               

               Conread position:
               268-433
               

               Cow position:
               chr5:37608542-37608708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               268-506
               

               Cow position:
               chr5:27679531-27679295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               273-445
               

               Cow position:
               chr5:54606166-54606332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               276-542
               

               Cow position:
               chr5:28371098-28370848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               286-502
               

               Cow position:
               chr5:25355312-25355530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               312-517
               

               Cow position:
               chr5:9025512-9025717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               316-508
               

               Cow position:
               chr5:39206955-39206763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               317-504
               

               Cow position:
               chr5:15808580-15808393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               319-517
               

               Cow position:
               chr5:12609953-12610138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               322-506
               

               Cow position:
               chr5:19299132-19298952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               328-506
               

               Cow position:
               chr5:20648909-20648735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               122, 54
               

               Conread position:
               328-517
               

               Cow position:
               chr5:47698039-47697853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               331-506
               

               Cow position:
               chr5:1286715-1286893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               336-497
               

               Cow position:
               chr5:29029698-29029866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               343-506
               

               Cow position:
               chr5:56826408-56826570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               62-506
               

               Cow position:
               chr6:23891657-23892096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 203
               

               Conread position:
               62-506
               

               Cow position:
               chr6:29077835-29078274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               62-515
               

               Cow position:
               chr6:23932863-23932444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 33
               

               Conread position:
               63-350
               

               Cow position:
               chr6:4666695-4666397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               63-506
               

               Cow position:
               chr6:45692559-45692124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 158
               

               Conread position:
               65-288
               

               Cow position:
               chr6:12519602-12519825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               69-408
               

               Cow position:
               chr6:6244799-6244472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 124
               

               Conread position:
               69-499
               

               Cow position:
               chr6:31688077-31687653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 142
               

               Conread position:
               70-336
               

               Cow position:
               chr6:40240645-40240900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               70-346
               

               Cow position:
               chr6:19459149-19459437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               136, 73
               

               Conread position:
               70-453
               

               Cow position:
               chr6:69274680-69274286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 259
               

               Conread position:
               70-506
               

               Cow position:
               chr6:6635252-6635688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               70-506
               

               Cow position:
               chr6:11159894-11159450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               70-517
               

               Cow position:
               chr6:44377379-44377826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 39
               

               Conread position:
               70-517
               

               Cow position:
               chr6:45617324-45616879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               72-517
               

               Cow position:
               chr6:41557579-41558036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 94
               

               Conread position:
               80-503
               

               Cow position:
               chr6:41157348-41157764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 106
               

               Conread position:
               83-216
               

               Cow position:
               chr6:51071830-51071965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               101, 129
               

               Conread position:
               83-506
               

               Cow position:
               chr6:39917286-39917713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               317
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               85-542
               

               Cow position:
               chr6:3017563-3018051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 319
               

               Conread position:
               86-506
               

               Cow position:
               chr6:58593991-58593599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               218, 100
               

               Conread position:
               102-506
               

               Cow position:
               chr6:5678904-5678492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 110
               

               Conread position:
               110-376
               

               Cow position:
               chr6:29082912-29082651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               127-504
               

               Cow position:
               chr6:62754327-62753946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               129-327
               

               Cow position:
               chr6:39293057-39293260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 168
               

               Conread position:
               138-503
               

               Cow position:
               chr6:3374271-3373877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 264
               

               Conread position:
               191-337
               

               Cow position:
               chr6:40299190-40299037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               196-506
               

               Cow position:
               chr6:32428677-32428984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               203-511
               

               Cow position:
               chr6:1077177-1076866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               208-441
               

               Cow position:
               chr6:46627250-46627484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               210-431
               

               Cow position:
               chr6:12516085-12516304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               210-506
               

               Cow position:
               chr6:6722394-6722695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               52, 116
               

               Conread position:
               210-508
               

               Cow position:
               chr6:66840113-66840417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               55, 170
               

               Conread position:
               210-517
               

               Cow position:
               chr6:53416708-53416401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               213-431
               

               Cow position:
               chr6:29299808-29300024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               228-505
               

               Cow position:
               chr6:20332576-20332858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               237-517
               

               Cow position:
               chr6:28087238-28086955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               244-502
               

               Cow position:
               chr6:55662017-55662275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               245-453
               

               Cow position:
               chr6:66676995-66677216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               252-506
               

               Cow position:
               chr6:812116-811857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 131
               

               Conread position:
               263-506
               

               Cow position:
               chr6:35698116-35697874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               268-506
               

               Cow position:
               chr6:44389941-44389705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               276-503
               

               Cow position:
               chr6:22098348-22098129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               278-506
               

               Cow position:
               chr6:35831863-35832096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 126
               

               Conread position:
               289-504
               

               Cow position:
               chr6:14279984-14280201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               304-506
               

               Cow position:
               chr6:33311452-33311649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               317-506
               

               Cow position:
               chr6:39293531-39293711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               320-499
               

               Cow position:
               chr6:37085255-37085432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               328-484
               

               Cow position:
               chr6:40241054-40241210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               115, 54
               

               Conread position:
               328-508
               

               Cow position:
               chr6:34556878-34557055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               335-536
               

               Cow position:
               chr6:43596172-43595968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 45
               

               Conread position:
               341-515
               

               Cow position:
               chr6:35126725-35126559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               357-506
               

               Cow position:
               chr6:50501993-50502138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               62-506
               

               Cow position:
               chr7:11593105-11592682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               62-517
               

               Cow position:
               chr7:39512496-39512057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               63-506
               

               Cow position:
               chr7:62516111-62516556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               70-216
               

               Cow position:
               chr7:37024939-37025086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               70-343
               

               Cow position:
               chr7:63547910-63547629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-447
               

               Cow position:
               chr7:27709553-27709163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               70-487
               

               Cow position:
               chr7:13822892-13823318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               70-502
               

               Cow position:
               chr7:20289154-20288715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               70-504
               

               Cow position:
               chr7:63328187-63328636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 92
               

               Conread position:
               70-506
               

               Cow position:
               chr7:42222326-42221877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 324
               

               Conread position:
               70-506
               

               Cow position:
               chr7:48335361-48334953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 156
               

               Conread position:
               70-506
               

               Cow position:
               chr7:61425661-61426119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 330
               

               Conread position:
               71-210
               

               Cow position:
               chr7:35754571-35754713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               71-216
               

               Cow position:
               chr7:28671909-28671765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 58
               

               Conread position:
               72-209
               

               Cow position:
               chr7:23446814-23446674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               72-216
               

               Cow position:
               chr7:11187331-11187477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               72-307
               

               Cow position:
               chr7:2967242-2967490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 46
               

               Conread position:
               72-506
               

               Cow position:
               chr7:43004494-43004932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 149
               

               Conread position:
               75-217
               

               Cow position:
               chr7:52130623-52130769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               80-339
               

               Cow position:
               chr7:1398163-1397900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               80-518
               

               Cow position:
               chr7:20104900-20104452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               84-516
               

               Cow position:
               chr7:29378029-29377602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 232
               

               Conread position:
               85-488
               

               Cow position:
               chr7:65953278-65952868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 153
               

               Conread position:
               92-339
               

               Cow position:
               chr7:27763107-27763353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               115-364
               

               Cow position:
               chr7:64366711-64366961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 150
               

               Conread position:
               124-303
               

               Cow position:
               chr7:34798414-34798597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               124-320
               

               Cow position:
               chr7:68367388-68367177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               128-506
               

               Cow position:
               chr7:67498863-67499241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 134
               

               Conread position:
               129-505
               

               Cow position:
               chr7:56664234-56664601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               130-542
               

               Cow position:
               chr7:5701086-5701509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 253
               

               Conread position:
               146-506
               

               Cow position:
               chr7:45064238-45063873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 194
               

               Conread position:
               165-504
               

               Cow position:
               chr7:28560851-28560492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 159
               

               Conread position:
               200-517
               

               Cow position:
               chr7:52131361-52131683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               207-432
               

               Cow position:
               chr7:49893427-49893205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               207-444
               

               Cow position:
               chr7:5435638-5435398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               207-451
               

               Cow position:
               chr7:5448056-5447807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               207-517
               

               Cow position:
               chr7:59844704-59845009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               208-360
               

               Cow position:
               chr7:11187791-11187947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               208-433
               

               Cow position:
               chr7:53405945-53406171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               208-438
               

               Cow position:
               chr7:33062518-33062292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               208-516
               

               Cow position:
               chr7:45099477-45099779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               208-517
               

               Cow position:
               chr7:64198628-64198326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               209-487
               

               Cow position:
               chr7:5247687-5247402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               210-381
               

               Cow position:
               chr7:12163409-12163580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 118
               

               Conread position:
               210-452
               

               Cow position:
               chr7:59164150-59164393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               210-504
               

               Cow position:
               chr7:62048666-62048954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               210-515
               

               Cow position:
               chr7:33339385-33339675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               212-509
               

               Cow position:
               chr7:68246563-68246862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 177
               

               Conread position:
               263-512
               

               Cow position:
               chr7:43231055-43231296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               268-442
               

               Cow position:
               chr7:19465530-19465359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               275-472
               

               Cow position:
               chr7:31442036-31441835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               275-506
               

               Cow position:
               chr7:46216365-46216593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               313-542
               

               Cow position:
               chr7:59204625-59204868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               315-506
               

               Cow position:
               chr7:68366894-68366697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               328-527
               

               Cow position:
               chr7:40622552-40622752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               399-506
               

               Cow position:
               chr7:43257631-43257738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               31-506
               

               Cow position:
               chr8:45686408-45685955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               63-257
               

               Cow position:
               chr8:8480871-8480674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 105
               

               Conread position:
               63-330
               

               Cow position:
               chr8:21119204-21118928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               63-506
               

               Cow position:
               chr8:40432796-40432354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               70-242
               

               Cow position:
               chr8:59137823-59137651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 132
               

               Conread position:
               70-307
               

               Cow position:
               chr8:27369165-27369407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               70-364
               

               Cow position:
               chr8:32720051-32720316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               168, 35
               

               Conread position:
               70-480
               

               Cow position:
               chr8:51877860-51877467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               200, 98
               

               Conread position:
               70-486
               

               Cow position:
               chr8:48682417-48682001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 85
               

               Conread position:
               70-499
               

               Cow position:
               chr8:19369409-19368997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               70-509
               

               Cow position:
               chr8:54158810-54159257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 254
               

               Conread position:
               70-516
               

               Cow position:
               chr8:2974728-2975191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 326
               

               Conread position:
               70-517
               

               Cow position:
               chr8:7104340-7103892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 95
               

               Conread position:
               70-517
               

               Cow position:
               chr8:19772575-19772993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               71-542
               

               Cow position:
               chr8:33437871-33438349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               75-366
               

               Cow position:
               chr8:11792281-11792597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               79-506
               

               Cow position:
               chr8:22103118-22102675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               80-375
               

               Cow position:
               chr8:21078617-21078920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 272
               

               Conread position:
               108-505
               

               Cow position:
               chr8:4336956-4336546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 283
               

               Conread position:
               110-506
               

               Cow position:
               chr8:5874269-5874657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 108
               

               Conread position:
               120-501
               

               Cow position:
               chr8:40273515-40273132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               126-451
               

               Cow position:
               chr8:952164-952487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               126-498
               

               Cow position:
               chr8:30021793-30021414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 237
               

               Conread position:
               126-506
               

               Cow position:
               chr8:18725343-18725721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               133-506
               

               Cow position:
               chr8:20341571-20341185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               189-410
               

               Cow position:
               chr8:51443359-51443142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               190-517
               

               Cow position:
               chr8:54828434-54828765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               198-506
               

               Cow position:
               chr8:12790673-12790380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               199-501
               

               Cow position:
               chr8:18810631-18810941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 163
               

               Conread position:
               208-432
               

               Cow position:
               chr8:36608828-36608608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               208-433
               

               Cow position:
               chr8:41411445-41411674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               208-447
               

               Cow position:
               chr8:43399178-43398932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               208-458
               

               Cow position:
               chr8:20672223-20671978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               208-508
               

               Cow position:
               chr8:47128786-47129084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               208-517
               

               Cow position:
               chr8:42151776-42151482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               209-443
               

               Cow position:
               chr8:60055565-60055332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 94
               

               Conread position:
               209-459
               

               Cow position:
               chr8:36686888-36687141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               210-373
               

               Cow position:
               chr8:51562248-51562413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 103
               

               Conread position:
               210-431
               

               Cow position:
               chr8:21945644-21945868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               210-453
               

               Cow position:
               chr8:51633987-51633738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 179
               

               Conread position:
               210-505
               

               Cow position:
               chr8:53891744-53892044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               212-517
               

               Cow position:
               chr8:23440884-23440586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               47, 115
               

               Conread position:
               213-506
               

               Cow position:
               chr8:15870886-15870593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               214-374
               

               Cow position:
               chr8:11974680-11974841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               214-482
               

               Cow position:
               chr8:33819011-33818741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               218-447
               

               Cow position:
               chr8:20286812-20287045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 127
               

               Conread position:
               219-374
               

               Cow position:
               chr8:9985956-9986110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               225-508
               

               Cow position:
               chr8:14617668-14617381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               40, 159
               

               Conread position:
               230-375
               

               Cow position:
               chr8:31185251-31185395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               239-516
               

               Cow position:
               chr8:6508035-6507753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               249-517
               

               Cow position:
               chr8:34439724-34439984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               260-507
               

               Cow position:
               chr8:53359693-53359441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 120
               

               Conread position:
               262-506
               

               Cow position:
               chr8:18883094-18883340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               268-506
               

               Cow position:
               chr8:8480378-8480134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               269-503
               

               Cow position:
               chr8:6764002-6763771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               272-506
               

               Cow position:
               chr8:18801518-18801750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               278-506
               

               Cow position:
               chr8:28387487-28387265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               306-508
               

               Cow position:
               chr8:9672193-9672396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 77
               

               Conread position:
               319-517
               

               Cow position:
               chr8:19793387-19793195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               326-518
               

               Cow position:
               chr8:1168112-1167918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               377-534
               

               Cow position:
               chr8:26041000-26040843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               55-254
               

               Cow position:
               chr9:59114356-59114143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               62-506
               

               Cow position:
               chr9:6109859-6109429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               63-328
               

               Cow position:
               chr9:55364861-55364583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               63-517
               

               Cow position:
               chr9:4834957-4834499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               70-216
               

               Cow position:
               chr9:55650997-55650848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 142
               

               Conread position:
               70-432
               

               Cow position:
               chr9:1281139-1281514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 223
               

               Conread position:
               70-506
               

               Cow position:
               chr9:18570425-18570865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 314
               

               Conread position:
               70-506
               

               Cow position:
               chr9:25502571-25502983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 120
               

               Conread position:
               70-506
               

               Cow position:
               chr9:34762891-34763336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 112
               

               Conread position:
               70-517
               

               Cow position:
               chr9:4985421-4985855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               71-547
               

               Cow position:
               chr9:51269828-51269358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               314
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               114, 278
               

               Conread position:
               75-215
               

               Cow position:
               chr9:14732289-14732147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               75-254
               

               Cow position:
               chr9:10761389-10761568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-328
               

               Cow position:
               chr9:15685497-15685751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               80-506
               

               Cow position:
               chr9:12198945-12199389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 88
               

               Conread position:
               81-415
               

               Cow position:
               chr9:5622072-5622408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               81-488
               

               Cow position:
               chr9:9077155-9077568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               85-374
               

               Cow position:
               chr9:44944159-44944451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 182
               

               Conread position:
               94-506
               

               Cow position:
               chr9:41318030-41318466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 305
               

               Conread position:
               97-375
               

               Cow position:
               chr9:39993678-39993964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               103-468
               

               Cow position:
               chr9:52725420-52725796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 289
               

               Conread position:
               115-504
               

               Cow position:
               chr9:7670536-7670147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 273
               

               Conread position:
               124-506
               

               Cow position:
               chr9:34188873-34188505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               125-506
               

               Cow position:
               chr9:53596899-53597294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               126-517
               

               Cow position:
               chr9:2638410-2638809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 211
               

               Conread position:
               164-504
               

               Cow position:
               chr9:35527584-35527234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 214
               

               Conread position:
               189-517
               

               Cow position:
               chr9:12565212-12564903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               191-464
               

               Cow position:
               chr9:46657817-46658084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               201-453
               

               Cow position:
               chr9:3582793-3583041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               203-441
               

               Cow position:
               chr9:24886469-24886705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               207-441
               

               Cow position:
               chr9:32688676-32688905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               207-498
               

               Cow position:
               chr9:12183550-12183251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               208-459
               

               Cow position:
               chr9:9539411-9539162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               208-542
               

               Cow position:
               chr9:47200398-47200728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               210-337
               

               Cow position:
               chr9:4915016-4915145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               210-506
               

               Cow position:
               chr9:1517485-1517765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               210-515
               

               Cow position:
               chr9:39001580-39001281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 168
               

               Conread position:
               211-380
               

               Cow position:
               chr9:19080409-19080582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               212-484
               

               Cow position:
               chr9:26197821-26198088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               213-506
               

               Cow position:
               chr9:1526983-1527279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 168
               

               Conread position:
               215-402
               

               Cow position:
               chr9:42214841-42215031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               217-515
               

               Cow position:
               chr9:31540107-31540399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               221-517
               

               Cow position:
               chr9:36508283-36508587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               239-542
               

               Cow position:
               chr9:55262464-55262754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               268-432
               

               Cow position:
               chr9:40858925-40859090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 111
               

               Conread position:
               268-506
               

               Cow position:
               chr9:6557577-6557344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               268-506
               

               Cow position:
               chr9:15855282-15855515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               268-506
               

               Cow position:
               chr9:50108838-50108605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               278-506
               

               Cow position:
               chr9:8234346-8234133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               285-432
               

               Cow position:
               chr9:7537814-7537958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               287-504
               

               Cow position:
               chr9:25812572-25812775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               290-504
               

               Cow position:
               chr9:56411392-56411596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               298-514
               

               Cow position:
               chr9:58125908-58125690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               321-542
               

               Cow position:
               chr9:19835682-19835907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               322-515
               

               Cow position:
               chr9:45140597-45140400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 55
               

               Conread position:
               324-515
               

               Cow position:
               chr9:22376964-22376771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               335-518
               

               Cow position:
               chr9:23294324-23294153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               357-511
               

               Cow position:
               chr9:15282842-15282687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               62-503
               

               Cow position:
               chrX:18814260-18814700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               67-491
               

               Cow position:
               chrX:23254111-23253695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               70-252
               

               Cow position:
               chrX:4631575-4631385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               70-325
               

               Cow position:
               chrX:24286054-24286318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               70-467
               

               Cow position:
               chrX:8558367-8557973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 316
               

               Conread position:
               70-473
               

               Cow position:
               chrX:24201279-24201679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               70-493
               

               Cow position:
               chrX:4597633-4597190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 40
               

               Conread position:
               70-506
               

               Cow position:
               chrX:956578-957023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               70-506
               

               Cow position:
               chrX:2186357-2186790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 244
               

               Conread position:
               70-506
               

               Cow position:
               chrX:11675162-11675606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 251
               

               Conread position:
               70-506
               

               Cow position:
               chrX:43647666-43647219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               70-542
               

               Cow position:
               chrX:19018162-19017661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               72-208
               

               Cow position:
               chrX:12826849-12826984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               73-359
               

               Cow position:
               chrX:16816769-16817059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 203
               

               Conread position:
               73-506
               

               Cow position:
               chrX:21816364-21816804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               74-504
               

               Cow position:
               chrX:2147441-2147845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 90
               

               Conread position:
               75-506
               

               Cow position:
               chrX:25453281-25453706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               77-485
               

               Cow position:
               chrX:31816795-31817188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               80-351
               

               Cow position:
               chrX:3405039-3404758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               80-506
               

               Cow position:
               chrX:9910647-9910224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               80-517
               

               Cow position:
               chrX:12688978-12688527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 306
               

               Conread position:
               85-484
               

               Cow position:
               chrX:25106322-25106738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 308
               

               Conread position:
               86-506
               

               Cow position:
               chrX:21885999-21885567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               93-506
               

               Cow position:
               chrX:4590072-4590482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               106-361
               

               Cow position:
               chrX:18517919-18518197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               118-339
               

               Cow position:
               chrX:19217182-19216946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               129-499
               

               Cow position:
               chrX:28938949-28939311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 195
               

               Conread position:
               129-506
               

               Cow position:
               chrX:19127466-19127100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               130-517
               

               Cow position:
               chrX:11982758-11983136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               132-369
               

               Cow position:
               chrX:9051276-9051029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 142
               

               Conread position:
               132-417
               

               Cow position:
               chrX:10311893-10312185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 253
               

               Conread position:
               135-517
               

               Cow position:
               chrX:40353471-40353857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 54
               

               Conread position:
               155-493
               

               Cow position:
               chrX:37956752-37957084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               163-517
               

               Cow position:
               chrX:20504888-20505249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               177-517
               

               Cow position:
               chrX:27458532-27458189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 217
               

               Conread position:
               199-506
               

               Cow position:
               chrX:6471929-6472244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               200-506
               

               Cow position:
               chrX:4625133-4625448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               203-373
               

               Cow position:
               chrX:5150469-5150302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               204-488
               

               Cow position:
               chrX:24203416-24203707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               205-517
               

               Cow position:
               chrX:18700128-18699814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 183
               

               Conread position:
               206-420
               

               Cow position:
               chrX:4629768-4629539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-452
               

               Cow position:
               chrX:37364653-37364901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               208-486
               

               Cow position:
               chrX:24952124-24951855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               208-506
               

               Cow position:
               chrX:2700869-2700572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               208-547
               

               Cow position:
               chrX:46372821-46372488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               209-364
               

               Cow position:
               chrX:5660283-5660444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               209-436
               

               Cow position:
               chrX:37067259-37067489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 178
               

               Conread position:
               209-516
               

               Cow position:
               chrX:10534317-10534619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               210-506
               

               Cow position:
               chrX:25921545-25921268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               210-508
               

               Cow position:
               chrX:24886545-24886259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               210-508
               

               Cow position:
               chrX:32546130-32546438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               60, 213
               

               Conread position:
               213-437
               

               Cow position:
               chrX:4794251-4794031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               213-517
               

               Cow position:
               chrX:18467697-18468008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               253-489
               

               Cow position:
               chrX:40698525-40698748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               255-506
               

               Cow position:
               chrX:37236296-37236536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               257-506
               

               Cow position:
               chrX:4631087-4630841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               260-516
               

               Cow position:
               chrX:37980679-37980927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               261-433
               

               Cow position:
               chrX:13060833-13061004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               263-461
               

               Cow position:
               chrX:39190943-39190747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               268-506
               

               Cow position:
               chrX:4440154-4440387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               169, 38
               

               Conread position:
               269-404
               

               Cow position:
               chrX:25653412-25653544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               269-506
               

               Cow position:
               chrX:4601343-4601108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               270-517
               

               Cow position:
               chrX:4948178-4947953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               271-517
               

               Cow position:
               chrX:13403445-13403203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               301-506
               

               Cow position:
               chrX:1330465-1330264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               320-455
               

               Cow position:
               chrX:38892193-38892060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               336-517
               

               Cow position:
               chrX:5956968-5956793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               381-517
               

               Cow position:
               chrX:16817059-16817191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               395-504
               

               Cow position:
               chrX:1427693-1427807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0