Cow genome map
| Conread name: | rlin16_g9.y1 |
| Conread position: | 104-334 |
| Cow position: | chr1:53593516-53593742 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 141, 24 |
| Conread position: | 104-369 |
| Cow position: | chr1:44522245-44521974 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 104-389 |
| Cow position: | chr10:51427442-51427738 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 145, 24 |
| Conread position: | 106-369 |
| Cow position: | chr10:51213390-51213656 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 105-389 |
| Cow position: | chr12:8728799-8729091 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 104-321 |
| Cow position: | chr14:43567678-43567892 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 108-320 |
| Cow position: | chr14:18531448-18531660 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 88-320 |
| Cow position: | chr15:9053040-9053268 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 93-350 |
| Cow position: | chr15:27758591-27758338 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 104-393 |
| Cow position: | chr15:11684766-11685064 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 106-336 |
| Cow position: | chr15:17695032-17695259 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 157-319 |
| Cow position: | chr15:47351519-47351682 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 169-398 |
| Cow position: | chr15:32843236-32843009 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 105-391 |
| Cow position: | chr16:29979375-29979095 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 144, 23 |
| Conread position: | 133-337 |
| Cow position: | chr17:16082951-16083154 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 105-331 |
| Cow position: | chr18:39459336-39459568 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 104-389 |
| Cow position: | chr19:35782619-35782339 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 104-336 |
| Cow position: | chr2:26755683-26755453 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 104-338 |
| Cow position: | chr2:76783959-76784189 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 107-288 |
| Cow position: | chr2:49197384-49197207 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 153-369 |
| Cow position: | chr2:1315205-1314988 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 177-391 |
| Cow position: | chr2:73358680-73358464 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 106-321 |
| Cow position: | chr21:17168480-17168692 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 192, 22 |
| Conread position: | 107-391 |
| Cow position: | chr21:49661465-49661170 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 177-367 |
| Cow position: | chr21:18335765-18335571 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 182-387 |
| Cow position: | chr21:2727595-2727805 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 104-302 |
| Cow position: | chr22:20931508-20931704 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 104-408 |
| Cow position: | chr22:25905373-25905052 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 146, 9 |
| Conread position: | 110-315 |
| Cow position: | chr22:43566639-43566437 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 104-314 |
| Cow position: | chr23:11399616-11399818 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 194, 24 |
| Conread position: | 104-368 |
| Cow position: | chr23:7257773-7258043 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 1-123 |
| Cow position: | chr24:2398933-2398811 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-336 |
| Cow position: | chr24:22924067-22924307 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 157, 38 |
| Conread position: | 182-395 |
| Cow position: | chr25:17717152-17717364 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 187-391 |
| Cow position: | chr29:8608720-8608518 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 104-307 |
| Cow position: | chr3:38324237-38324039 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 105-320 |
| Cow position: | chr4:7408649-7408858 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 107-339 |
| Cow position: | chr4:14194074-14194303 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 104-314 |
| Cow position: | chr6:5340581-5340786 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 116-387 |
| Cow position: | chr7:46925992-46926267 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 126-391 |
| Cow position: | chr7:34007442-34007167 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 182-404 |
| Cow position: | chr7:26018652-26018432 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 88-396 |
| Cow position: | chr8:14358024-14358335 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 104-314 |
| Cow position: | chr9:51760709-51760918 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 16 |
| Conread position: | 104-289 |
| Cow position: | chrX:3952389-3952571 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 104-389 |
| Cow position: | chrX:37949324-37949608 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 104-405 |
| Cow position: | chrX:25176337-25176640 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 174, 24 |
| Conread position: | 116-334 |
| Cow position: | chrX:13114028-13114245 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 185-389 |
| Cow position: | chrX:27604356-27604562 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 114 |