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Cow genome map

           
Conread name:
           
rlnt13c_p11.y1
        

               
Conread position:
               
8-306
               

               
Cow position:
               
chr10:5151081-5151388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
17-413
               

               
Cow position:
               
chr10:28395554-28395152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr10:15462238-15462535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
19-306
               

               
Cow position:
               
chr10:6719642-6719936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr10:22528147-22527859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr10:29251916-29252208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr10:39227911-39228230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr10:24763233-24763586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 160
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr10:41408041-41408403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr10:30352598-30352993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 263
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr10:22520411-22520120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr10:49923600-49923229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr10:8934246-8934553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr10:7816885-7817152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
85-397
               

               
Cow position:
               
chr10:19191587-19191890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
87-410
               

               
Cow position:
               
chr10:24756227-24756563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr11:42793250-42792930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr11:77319158-77319563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr11:24601715-24602105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 207
               

               
Conread position:
               
33-279
               

               
Cow position:
               
chr11:16251489-16251223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
33-287
               

               
Cow position:
               
chr11:30912233-30911973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr11:69119059-69119342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
72, 168
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr11:44637001-44636703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
33-339
               

               
Cow position:
               
chr11:62151122-62150814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
33-346
               

               
Cow position:
               
chr11:35684738-35684414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 238
               

               
Conread position:
               
33-360
               

               
Cow position:
               
chr11:47899036-47899368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 185
               

               
Conread position:
               
33-363
               

               
Cow position:
               
chr11:15632800-15632457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 277
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr11:1625455-1625079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
167, 131
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr11:30354826-30355188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
33-412
               

               
Cow position:
               
chr11:45646834-45646433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 256
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr11:53553012-53553269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
34-366
               

               
Cow position:
               
chr11:13061463-13061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr11:64044012-64044362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 270
               

               
Conread position:
               
103-306
               

               
Cow position:
               
chr11:80556053-80556268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 199
               

               
Conread position:
               
13-302
               

               
Cow position:
               
chr12:17000978-17001280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 230
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr12:9143118-9143510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
77, 174
               

               
Conread position:
               
18-404
               

               
Cow position:
               
chr12:43942205-43942602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
190, 91
               

               
Conread position:
               
33-295
               

               
Cow position:
               
chr12:39486169-39486441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 151
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr12:30170407-30170699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 242
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr12:32169276-32169570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 163
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr12:45820617-45820334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
33-406
               

               
Cow position:
               
chr12:18123426-18123798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr12:26317218-26317473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
55-306
               

               
Cow position:
               
chr12:27037686-27037422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr13:13321006-13320613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
18-306
               

               
Cow position:
               
chr13:45022986-45023290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 189
               

               
Conread position:
               
19-401
               

               
Cow position:
               
chr13:25817734-25817350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
189, 73
               

               
Conread position:
               
31-489
               

               
Cow position:
               
chr13:11808754-11808313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr13:13266009-13265768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr13:10928783-10929071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr13:55673998-55674291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
33-318
               

               
Cow position:
               
chr13:48037827-48037530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 260
               

               
Conread position:
               
33-392
               

               
Cow position:
               
chr13:52057746-52057387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 59
               

               
Conread position:
               
33-392
               

               
Cow position:
               
chr13:54702397-54702009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr13:23479236-23478853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
34-348
               

               
Cow position:
               
chr13:17439560-17439889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
71, 258
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr13:43480267-43479886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
35-306
               

               
Cow position:
               
chr13:55315984-55316272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr13:24586252-24585964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 227
               

               
Conread position:
               
35-410
               

               
Cow position:
               
chr13:152156-151777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
173, 58
               

               
Conread position:
               
38-396
               

               
Cow position:
               
chr13:61976761-61977132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 176
               

               
Conread position:
               
93-369
               

               
Cow position:
               
chr13:18696987-18696692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr13:8374627-8374936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 238
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr13:18058104-18058422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr13:54583022-54582699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
66, 213
               

               
Conread position:
               
17-408
               

               
Cow position:
               
chr14:33791468-33791063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
18-306
               

               
Cow position:
               
chr14:41211136-41210831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
32-405
               

               
Cow position:
               
chr14:18941038-18941415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr14:9308490-9308206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr14:39769965-39770339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 266
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr14:27791794-27791518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr14:13846250-13845857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 301
               

               
Conread position:
               
35-288
               

               
Cow position:
               
chr14:37131921-37131648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-309
               

               
Cow position:
               
chr14:32371481-32371767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr14:23682523-23682148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
39-408
               

               
Cow position:
               
chr14:18345471-18345854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 258
               

               
Conread position:
               
40-397
               

               
Cow position:
               
chr14:1645931-1646304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 252
               

               
Conread position:
               
55-395
               

               
Cow position:
               
chr14:16760642-16760282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
68-395
               

               
Cow position:
               
chr14:20826702-20826374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
221, 106
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr15:5730248-5729963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
33-313
               

               
Cow position:
               
chr15:16307727-16307438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 169
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr15:26079060-26079424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
33-405
               

               
Cow position:
               
chr15:22531973-22531593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
42-278
               

               
Cow position:
               
chr15:24305176-24305430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
93-350
               

               
Cow position:
               
chr15:6905310-6905058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
115, 54
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr15:36888072-36887767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chr16:25839375-25839778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr16:33226768-33226376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr16:52835115-52834739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
33-288
               

               
Cow position:
               
chr16:26342055-26342314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
33-295
               

               
Cow position:
               
chr16:7504877-7505145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
33-305
               

               
Cow position:
               
chr16:11790791-11791076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 261
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr16:48340914-48340627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr16:13752346-13752063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr16:29608296-29608578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr16:40562005-40562301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
33-361
               

               
Cow position:
               
chr16:50873397-50873051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 191
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr16:48956575-48956959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr16:54578945-54579327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
34-278
               

               
Cow position:
               
chr16:48370169-48369911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
35-403
               

               
Cow position:
               
chr16:45139449-45139832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
38-411
               

               
Cow position:
               
chr16:45677069-45676695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
59, 176
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr16:16597346-16597721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
54-333
               

               
Cow position:
               
chr16:5256795-5257091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
54-395
               

               
Cow position:
               
chr16:45677774-45678138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
72-397
               

               
Cow position:
               
chr16:51500753-51501090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 217
               

               
Conread position:
               
15-255
               

               
Cow position:
               
chr17:21207334-21207086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
31-366
               

               
Cow position:
               
chr17:25901012-25901368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
32-397
               

               
Cow position:
               
chr17:28285210-28284830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
33-278
               

               
Cow position:
               
chr17:29715367-29715120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr17:36331147-36330849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
33-341
               

               
Cow position:
               
chr17:24553823-24554136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 184
               

               
Conread position:
               
33-369
               

               
Cow position:
               
chr17:15103069-15102723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 137
               

               
Conread position:
               
33-369
               

               
Cow position:
               
chr17:17405957-17406302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
33-370
               

               
Cow position:
               
chr17:24824071-24824411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr17:12536649-12536272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
73, 303
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr17:21115129-21114753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr17:20157434-20157816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr17:32138579-32138315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
36-407
               

               
Cow position:
               
chr17:25611915-25612301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
39-368
               

               
Cow position:
               
chr17:4225666-4225329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 251
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr17:4121886-4121562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
144-401
               

               
Cow position:
               
chr17:40638882-40639155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr18:28924100-28923753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr18:44549175-44548908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr18:11811711-11811983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
33-305
               

               
Cow position:
               
chr18:47511741-47512038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr18:11684734-11685017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr18:44484012-44483738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr18:45570767-45571085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr18:15614102-15613736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
33-402
               

               
Cow position:
               
chr18:29958401-29958040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
33-406
               

               
Cow position:
               
chr18:12118098-12117716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr18:20126048-20126420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 274
               

               
Conread position:
               
37-257
               

               
Cow position:
               
chr18:10954224-10954451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 181
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr18:37002379-37002667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
45-397
               

               
Cow position:
               
chr18:17391216-17390862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
265, 56
               

               
Conread position:
               
48-308
               

               
Cow position:
               
chr18:12242041-12242309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr18:31082558-31082313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
97-363
               

               
Cow position:
               
chr18:16686525-16686246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 235
               

               
Conread position:
               
166-410
               

               
Cow position:
               
chr18:49038344-49038600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
19-307
               

               
Cow position:
               
chr19:39056998-39057300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
19-392
               

               
Cow position:
               
chr19:15068240-15067866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr19:41945943-41946218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr19:20671134-20670849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 187
               

               
Conread position:
               
33-309
               

               
Cow position:
               
chr19:13129649-13129928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr19:46454618-46454991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr19:25086305-25086677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 58
               

               
Conread position:
               
51-397
               

               
Cow position:
               
chr19:22043558-22043207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr2:38362607-38362216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
20-404
               

               
Cow position:
               
chr2:77467691-77467288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 296
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr2:40879868-40880137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr2:53851211-53851505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr2:69747842-69747547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr2:72183711-72183423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
33-339
               

               
Cow position:
               
chr2:13582362-13582681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr2:44170335-44170719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 303
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr2:46189313-46188935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr2:82581152-82580774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 243
               

               
Conread position:
               
33-400
               

               
Cow position:
               
chr2:21002964-21003339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
186, 51
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr2:80115883-80116265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr2:37009198-37009577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
144, 186
               

               
Conread position:
               
44-403
               

               
Cow position:
               
chr2:44051093-44051476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 258
               

               
Conread position:
               
80-402
               

               
Cow position:
               
chr2:46351940-46351616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
84-304
               

               
Cow position:
               
chr2:30144552-30144781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
96-397
               

               
Cow position:
               
chr2:45542551-45542240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 231
               

               
Conread position:
               
108-397
               

               
Cow position:
               
chr2:17842119-17841830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
115-272
               

               
Cow position:
               
chr2:46223104-46222955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr20:28604994-28605410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr20:18423522-18423761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr20:3607148-3606850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
190, 146
               

               
Conread position:
               
33-287
               

               
Cow position:
               
chr20:12420800-12420529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
33-287
               

               
Cow position:
               
chr20:23505649-23505917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr20:19363541-19363251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr20:19459826-19459554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
166, 36
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr20:15549076-15548769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
33-363
               

               
Cow position:
               
chr20:26996351-26996693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 293
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr20:7426368-7425994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr20:12582126-12581752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
35-348
               

               
Cow position:
               
chr20:38768630-38768314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
36-404
               

               
Cow position:
               
chr20:39398312-39398693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
39-308
               

               
Cow position:
               
chr20:9412319-9412599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
42-255
               

               
Cow position:
               
chr20:15235595-15235818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
42-403
               

               
Cow position:
               
chr20:3254878-3255244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
65-403
               

               
Cow position:
               
chr20:28441179-28441529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 269
               

               
Conread position:
               
115-397
               

               
Cow position:
               
chr20:7738321-7738030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 211
               

               
Conread position:
               
17-397
               

               
Cow position:
               
chr21:24598487-24598871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr21:32559526-32559146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 103
               

               
Conread position:
               
33-291
               

               
Cow position:
               
chr21:37479798-37480069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr21:33210040-33210318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr21:38120949-38121231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr21:27569319-27569041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
33-311
               

               
Cow position:
               
chr21:29214307-29214025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
179, 115
               

               
Conread position:
               
33-324
               

               
Cow position:
               
chr21:725050-724737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 185
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr21:802452-802099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
33-402
               

               
Cow position:
               
chr21:641426-641814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr21:42348834-42348563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
35-332
               

               
Cow position:
               
chr21:42540376-42540064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
35-406
               

               
Cow position:
               
chr21:7672976-7673347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
173, 64
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr21:24642364-24642652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 261
               

               
Conread position:
               
45-278
               

               
Cow position:
               
chr21:18041989-18041746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
51-404
               

               
Cow position:
               
chr21:48234299-48233942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
17-395
               

               
Cow position:
               
chr22:15568259-15567866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 132
               

               
Conread position:
               
18-257
               

               
Cow position:
               
chr22:43812658-43812410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr22:15039424-15039036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
33-257
               

               
Cow position:
               
chr22:43119954-43119716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
33-302
               

               
Cow position:
               
chr22:41271216-41270943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr22:22612887-22613170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr22:845677-845968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
33-391
               

               
Cow position:
               
chr22:17852848-17852486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
174, 118
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr22:4356874-4357243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr22:4061168-4060790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr22:10567916-10567560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
183, 37
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr22:17950182-17949820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
33-408
               

               
Cow position:
               
chr22:33448300-33447909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
33-411
               

               
Cow position:
               
chr22:33485828-33485450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
33-411
               

               
Cow position:
               
chr22:38439383-38438983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr22:18838024-18838295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr22:8324021-8324304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
34-369
               

               
Cow position:
               
chr22:17764153-17764505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 264
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:5616075-5616453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 302
               

               
Conread position:
               
35-350
               

               
Cow position:
               
chr22:10314854-10315181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
140, 260
               

               
Conread position:
               
36-308
               

               
Cow position:
               
chr22:13300187-13300476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
33-303
               

               
Cow position:
               
chr23:11045264-11045550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
33-392
               

               
Cow position:
               
chr23:1883173-1883552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr23:4968740-4968363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr23:7845069-7845455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 306
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr23:8063334-8063692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr23:24509482-24509854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
33-410
               

               
Cow position:
               
chr23:26986494-26986090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
37-406
               

               
Cow position:
               
chr23:8698227-8698598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr23:29459304-29459028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
65-397
               

               
Cow position:
               
chr23:5426239-5426601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 275
               

               
Conread position:
               
96-401
               

               
Cow position:
               
chr23:7360962-7361263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr23:21502787-21502560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
108-403
               

               
Cow position:
               
chr23:12363761-12363449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 210
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr24:6487644-6487952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
19-395
               

               
Cow position:
               
chr24:1269544-1269912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
33-287
               

               
Cow position:
               
chr24:28303595-28303343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
33-410
               

               
Cow position:
               
chr24:2402623-2402222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 309
               

               
Conread position:
               
33-490
               

               
Cow position:
               
chr24:30314282-30313813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 363
               

               
Conread position:
               
35-367
               

               
Cow position:
               
chr24:211737-212083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 276
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr25:36037025-36036671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
18-403
               

               
Cow position:
               
chr25:35347665-35348071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 277
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr25:10218275-10217985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr25:36761882-36762169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
33-339
               

               
Cow position:
               
chr25:15254555-15254253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr25:9990314-9989986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 131
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr25:20007923-20008293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
34-316
               

               
Cow position:
               
chr25:15273466-15273747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
51-408
               

               
Cow position:
               
chr25:22178715-22179080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr26:14175043-14175366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 139
               

               
Conread position:
               
32-396
               

               
Cow position:
               
chr26:10764013-10764391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr26:20291887-20291515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr26:26888339-26887960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr26:32898076-32897702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr26:33202263-33201894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr26:8307716-8307350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
72-308
               

               
Cow position:
               
chr26:23315600-23315859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr27:30890465-30890090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr27:21668947-21669317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
66-308
               

               
Cow position:
               
chr27:1123180-1122920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 222
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr27:16589575-16589814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
108-402
               

               
Cow position:
               
chr27:20481276-20481566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr28:16346756-16346354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr28:26614671-26614984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
32-395
               

               
Cow position:
               
chr28:9636674-9636294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 323
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr28:16204549-16204262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr28:15044071-15043789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr28:8347518-8347900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr28:12430393-12430773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
112, 105
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr28:25056756-25057125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
33-408
               

               
Cow position:
               
chr28:11527472-11527082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
33-410
               

               
Cow position:
               
chr28:5203983-5204369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
33-411
               

               
Cow position:
               
chr28:4070752-4071141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 262
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr28:4587881-4588160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr28:16919377-16919008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
37-348
               

               
Cow position:
               
chr28:2961037-2960719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
52-410
               

               
Cow position:
               
chr28:4809596-4809954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr28:2132100-2131843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr28:4158803-4159027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 176
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr29:34773972-34773673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr29:24578633-24578927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
33-290
               

               
Cow position:
               
chr29:10456776-10456515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
33-305
               

               
Cow position:
               
chr29:17607193-17607481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr29:29974818-29975106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr29:36216894-36217216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr29:39111530-39111164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
35-397
               

               
Cow position:
               
chr29:12679933-12680318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
9-372
               

               
Cow position:
               
chr3:75080498-75080869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
18-411
               

               
Cow position:
               
chr3:7338034-7337633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 178
               

               
Conread position:
               
33-277
               

               
Cow position:
               
chr3:23417113-23416876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr3:78076944-78077227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr3:55272288-55272001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
141, 93
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr3:63177266-63177527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
256, 71
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr3:56059562-56059914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr3:70565983-70565599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr3:55189996-55189613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr3:10958474-10958098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr3:54945879-54946267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 304
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr3:44932264-44932649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 294
               

               
Conread position:
               
36-348
               

               
Cow position:
               
chr3:60265479-60265172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
43-289
               

               
Cow position:
               
chr3:17447843-17447588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 82
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr3:68708238-68707885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr3:15506220-15506492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
93-403
               

               
Cow position:
               
chr3:74079822-74079495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr3:56523599-56523402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr3:53508458-53508693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
20-369
               

               
Cow position:
               
chr4:53100564-53100921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
30-308
               

               
Cow position:
               
chr4:25356538-25356259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
33-298
               

               
Cow position:
               
chr4:48485771-48486045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
33-305
               

               
Cow position:
               
chr4:11193953-11194243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr4:61897768-61897475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr4:17112106-17111813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 269
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr4:20139749-20139456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 275
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr4:21233100-21232813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
33-363
               

               
Cow position:
               
chr4:38952329-38952664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr4:28772296-28771916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr4:9444919-9444523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
33-406
               

               
Cow position:
               
chr4:48152598-48152209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr4:19597542-19597285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
95-257
               

               
Cow position:
               
chr4:54479069-54478909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
33-257
               

               
Cow position:
               
chr5:34915945-34916173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr5:41546090-41545799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr5:52165379-52165024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 281
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr5:46510062-46509771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 135
               

               
Conread position:
               
35-347
               

               
Cow position:
               
chr5:15598428-15598106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 281
               

               
Conread position:
               
35-397
               

               
Cow position:
               
chr5:40109307-40109672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr5:55967076-55966788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 181
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr5:56070664-56071041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 298
               

               
Conread position:
               
46-348
               

               
Cow position:
               
chr5:24996409-24996091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr5:44028480-44028122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr5:30629322-30629087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr6:28977227-28976932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
191, 80
               

               
Conread position:
               
33-272
               

               
Cow position:
               
chr6:49410871-49410626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr6:9736824-9736549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr6:47574723-47575014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-403
               

               
Cow position:
               
chr6:19401682-19402052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr6:47640604-47640301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr6:15243088-15243479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
57-403
               

               
Cow position:
               
chr6:19264658-19264291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 300
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr6:58597655-58597398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
72-348
               

               
Cow position:
               
chr6:57571330-57571625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 267
               

               
Conread position:
               
96-287
               

               
Cow position:
               
chr6:11192583-11192378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
103-363
               

               
Cow position:
               
chr6:59603317-59603046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr6:61168670-61168889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr7:48667227-48667606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr7:20968238-20968505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 194
               

               
Conread position:
               
20-348
               

               
Cow position:
               
chr7:47697831-47698153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr7:48243495-48243782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
33-345
               

               
Cow position:
               
chr7:36278115-36278443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 269
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr7:23456996-23456673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr7:26631991-26631664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
33-363
               

               
Cow position:
               
chr7:17713645-17713309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr7:48714668-48715058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 345
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr7:17967298-17966921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr7:29509774-29510137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr7:30276553-30276941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 242
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr7:31171132-31170756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 182
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr7:53053586-53053202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
33-398
               

               
Cow position:
               
chr7:33393132-33393511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr7:22793167-22793544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr7:39451312-39451039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
36-397
               

               
Cow position:
               
chr7:29300936-29300573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
41-397
               

               
Cow position:
               
chr7:50066284-50065914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
52-339
               

               
Cow position:
               
chr7:49750969-49751263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
127-397
               

               
Cow position:
               
chr7:8658430-8658717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr8:32855028-32854660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr8:61567578-61567302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
33-391
               

               
Cow position:
               
chr8:24371927-24371552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr8:35580845-35580464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
33-410
               

               
Cow position:
               
chr8:4796572-4796936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr8:4924355-4924645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 253
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr8:10970618-10971005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 358
               

               
Conread position:
               
36-369
               

               
Cow position:
               
chr8:16031780-16031442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 143
               

               
Conread position:
               
43-367
               

               
Cow position:
               
chr8:33407049-33406707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
45-397
               

               
Cow position:
               
chr8:48528157-48527791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
46-387
               

               
Cow position:
               
chr8:8190267-8189898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr9:34287066-34286655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr9:7634532-7634235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr9:57896874-57897147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 64
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr9:34374678-34374963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr9:51204976-51204628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 298
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr9:55256301-55256589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr9:34957806-34958184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 299
               

               
Conread position:
               
56-368
               

               
Cow position:
               
chr9:48628260-48627928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr9:62907836-62908057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
81-395
               

               
Cow position:
               
chr9:41728456-41728130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr9:4340981-4341297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr9:49292967-49293182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chrX:38852982-38853330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
16-408
               

               
Cow position:
               
chrX:11655877-11656279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
33-391
               

               
Cow position:
               
chrX:38642062-38642430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 184
               

               
Conread position:
               
33-392
               

               
Cow position:
               
chrX:37781313-37780926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 308
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chrX:47362802-47362530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
39-278
               

               
Cow position:
               
chrX:26876072-26875817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
53-397
               

               
Cow position:
               
chrX:27145447-27145789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
95-408
               

               
Cow position:
               
chrX:20584192-20584513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 241