Cow genome map
| Conread name: | rlyg18_b16.y1 |
| Conread position: | 33-326 |
| Cow position: | chr1:93854553-93854860 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 241 |
| Conread position: | 44-408 |
| Cow position: | chr1:99375005-99375371 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 55-576 |
| Cow position: | chr1:82355776-82356311 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 55-581 |
| Cow position: | chr1:44101692-44101163 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 58-442 |
| Cow position: | chr1:99020902-99020531 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 200 |
| Conread position: | 61-487 |
| Cow position: | chr1:98865091-98864645 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 216 |
| Conread position: | 62-330 |
| Cow position: | chr1:39481920-39481639 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 62-579 |
| Cow position: | chr1:31422198-31421703 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 142 |
| Conread position: | 81-337 |
| Cow position: | chr1:44138263-44137998 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 81-581 |
| Cow position: | chr1:38396310-38396796 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 235 |
| Conread position: | 340-578 |
| Cow position: | chr1:44137692-44137470 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 341-569 |
| Cow position: | chr1:33389094-33389312 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 417-539 |
| Cow position: | chr1:34511570-34511693 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 58-581 |
| Cow position: | chr10:6260715-6260179 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 228 |
| Conread position: | 58-581 |
| Cow position: | chr10:24978054-24977521 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 61-561 |
| Cow position: | chr10:11820418-11820947 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 501 |
| Conread position: | 107-487 |
| Cow position: | chr10:39880916-39880517 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 223-579 |
| Cow position: | chr10:64302883-64302532 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 180 |
| Conread position: | 242-568 |
| Cow position: | chr10:28116200-28115880 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 156 |
| Conread position: | 44-578 |
| Cow position: | chr11:30187000-30187529 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 219 |
| Conread position: | 47-578 |
| Cow position: | chr11:44230826-44231367 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 48-581 |
| Cow position: | chr11:36761803-36762329 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 56 |
| Conread position: | 168-334 |
| Cow position: | chr11:30205087-30205256 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 219-580 |
| Cow position: | chr11:13162844-13163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 82 |
| Conread position: | 219-581 |
| Cow position: | chr11:13067160-13066809 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 242-376 |
| Cow position: | chr11:9415226-9415091 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 340-570 |
| Cow position: | chr11:30205558-30205777 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 341-578 |
| Cow position: | chr11:36713480-36713250 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 370-579 |
| Cow position: | chr12:17976803-17977007 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 58-579 |
| Cow position: | chr13:21131107-21131638 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 285-581 |
| Cow position: | chr13:22185574-22185298 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 288-581 |
| Cow position: | chr13:34048267-34048556 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 364-564 |
| Cow position: | chr13:30261842-30262048 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 44-554 |
| Cow position: | chr14:38816557-38816043 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 54-541 |
| Cow position: | chr14:43553081-43553588 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 345 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 65-301 |
| Cow position: | chr14:32534076-32533842 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 99-581 |
| Cow position: | chr14:30706982-30706486 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 440 |
| Conread position: | 146-478 |
| Cow position: | chr14:34044259-34043943 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 29 |
| Conread position: | 285-567 |
| Cow position: | chr14:42123059-42122785 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 288-581 |
| Cow position: | chr14:33487461-33487751 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 317-581 |
| Cow position: | chr14:9516271-9516006 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 48-337 |
| Cow position: | chr15:18023133-18022821 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 48-581 |
| Cow position: | chr15:20357631-20357089 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 331 |
| Conread position: | 60-467 |
| Cow position: | chr15:32672553-32672965 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 401 |
| Conread position: | 107-580 |
| Cow position: | chr15:30810345-30810814 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 116-581 |
| Cow position: | chr15:498111-498567 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 260-576 |
| Cow position: | chr15:1254355-1254658 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 55-359 |
| Cow position: | chr16:41758134-41757822 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 58-564 |
| Cow position: | chr16:24155129-24154608 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 58-577 |
| Cow position: | chr16:28438473-28437944 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 368-546 |
| Cow position: | chr16:41757275-41757105 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 386-558 |
| Cow position: | chr16:25170608-25170775 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 219-581 |
| Cow position: | chr17:15383959-15384302 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 48-572 |
| Cow position: | chr18:9186675-9186158 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 57-311 |
| Cow position: | chr18:51480940-51481207 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 58-337 |
| Cow position: | chr18:46877906-46877615 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 61-295 |
| Cow position: | chr18:16078822-16079069 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 183-581 |
| Cow position: | chr18:4885348-4884940 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 209 |
| Conread position: | 28-298 |
| Cow position: | chr19:35376862-35377140 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 55-576 |
| Cow position: | chr19:17018568-17019072 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 58-581 |
| Cow position: | chr19:7449917-7449372 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 123-437 |
| Cow position: | chr19:20111077-20110763 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 61, 136 |
| Conread position: | 54-576 |
| Cow position: | chr2:77208190-77208740 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 58-546 |
| Cow position: | chr2:45921710-45921213 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 61-455 |
| Cow position: | chr2:15580433-15580030 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 72-527 |
| Cow position: | chr2:45968790-45968324 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 96-579 |
| Cow position: | chr2:63977505-63977999 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 221-581 |
| Cow position: | chr20:18325305-18324953 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 249-352 |
| Cow position: | chr20:19367254-19367150 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 58-358 |
| Cow position: | chr21:3194567-3194875 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 79-554 |
| Cow position: | chr21:23601397-23601867 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 210 |
| Conread position: | 339-556 |
| Cow position: | chr21:21517642-21517852 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 412-581 |
| Cow position: | chr21:37292737-37292902 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 42-579 |
| Cow position: | chr22:36581182-36580646 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 13 |
| Conread position: | 55-576 |
| Cow position: | chr22:11782522-11782009 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 58-581 |
| Cow position: | chr22:298326-297778 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 265-505 |
| Cow position: | chr22:36552880-36552650 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 333-561 |
| Cow position: | chr22:36591528-36591303 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 368-581 |
| Cow position: | chr22:8875549-8875767 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 378-580 |
| Cow position: | chr22:292514-292315 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 58-552 |
| Cow position: | chr23:6216582-6217114 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 58-581 |
| Cow position: | chr23:26836288-26836817 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 214 |
| Conread position: | 81-581 |
| Cow position: | chr23:13509090-13509586 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 113-358 |
| Cow position: | chr23:3863013-3863265 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 57-297 |
| Cow position: | chr24:6335784-6336029 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 58-578 |
| Cow position: | chr24:14873258-14872747 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 250 |
| Conread position: | 72-535 |
| Cow position: | chr24:6510723-6510239 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 329 |
| Conread position: | 65-581 |
| Cow position: | chr25:3378699-3378151 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 360 |
| Conread position: | 61-462 |
| Cow position: | chr27:6013443-6013846 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 58-579 |
| Cow position: | chr28:5800677-5801184 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 184 |
| Conread position: | 328-581 |
| Cow position: | chr28:10230282-10230020 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 248 |
| Conread position: | 329-578 |
| Cow position: | chr28:29436921-29436672 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 58-581 |
| Cow position: | chr29:8062881-8062327 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 458 |
| Conread position: | 58-581 |
| Cow position: | chr29:16017130-16016590 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 55-576 |
| Cow position: | chr3:18729206-18728687 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 57-581 |
| Cow position: | chr3:21305246-21304699 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 107-581 |
| Cow position: | chr3:64821598-64822058 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 112-504 |
| Cow position: | chr3:49601943-49601552 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 340-562 |
| Cow position: | chr3:37624529-37624744 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 340-576 |
| Cow position: | chr3:70886984-70887208 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 376-581 |
| Cow position: | chr3:31415412-31415616 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 126, 8 |
| Conread position: | 58-578 |
| Cow position: | chr4:969302-968753 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 58-581 |
| Cow position: | chr4:4176171-4176706 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 208 |
| Conread position: | 61-578 |
| Cow position: | chr4:1497014-1496494 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 251 |
| Conread position: | 105-336 |
| Cow position: | chr4:17382639-17382404 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 245-581 |
| Cow position: | chr4:44925968-44925642 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 340-580 |
| Cow position: | chr4:32622025-32622255 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 138 |
| Conread position: | 33-297 |
| Cow position: | chr5:32673933-32673652 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 55-576 |
| Cow position: | chr5:28022989-28023483 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 284 |
| Conread position: | 239-576 |
| Cow position: | chr5:58055443-58055104 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 98 |
| Conread position: | 288-575 |
| Cow position: | chr5:41358385-41358103 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 295-581 |
| Cow position: | chr5:18402284-18402011 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 63-579 |
| Cow position: | chr6:69142017-69142532 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 78-579 |
| Cow position: | chr6:6542956-6543466 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 313 |
| Conread position: | 138-375 |
| Cow position: | chr6:31637801-31637556 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 72, 215 |
| Conread position: | 266-486 |
| Cow position: | chr6:34025217-34025440 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 132 |
| Conread position: | 347-576 |
| Cow position: | chr6:35434046-35434262 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 365-581 |
| Cow position: | chr6:31637619-31637414 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 370-581 |
| Cow position: | chr6:10630881-10631095 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 52-541 |
| Cow position: | chr7:63951765-63951267 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 57-337 |
| Cow position: | chr7:25102096-25102385 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 58-454 |
| Cow position: | chr7:19048822-19048425 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 108-366 |
| Cow position: | chr7:41487674-41487936 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 91, 207 |
| Conread position: | 165-581 |
| Cow position: | chr7:26851477-26851896 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 222-581 |
| Cow position: | chr7:30302474-30302827 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 339-555 |
| Cow position: | chr7:40270139-40269928 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 419-581 |
| Cow position: | chr7:19048487-19048332 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 434-581 |
| Cow position: | chr7:41876197-41876048 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 65-541 |
| Cow position: | chr8:51327832-51328323 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 246 |
| Conread position: | 238-580 |
| Cow position: | chr8:16084801-16085133 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 130 |
| Conread position: | 384-581 |
| Cow position: | chr8:38578164-38577972 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 384-581 |
| Cow position: | chr8:38586085-38585896 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 188, 80 |
| Conread position: | 429-579 |
| Cow position: | chr8:24874873-24874724 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 6-579 |
| Cow position: | chr9:29328151-29328711 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 58-354 |
| Cow position: | chr9:59510700-59511008 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 268 |
| Conread position: | 58-581 |
| Cow position: | chr9:3394077-3393555 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 205 |
| Conread position: | 58-581 |
| Cow position: | chr9:3726182-3726733 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 466 |
| Conread position: | 288-576 |
| Cow position: | chr9:64159289-64159572 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 377-577 |
| Cow position: | chr9:59511224-59511430 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 126, 152 |
| Conread position: | 42-576 |
| Cow position: | chrX:26428250-26427697 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 58-349 |
| Cow position: | chrX:24114374-24114070 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 247 |
| Conread position: | 61-366 |
| Cow position: | chrX:29813521-29813822 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 139 |
| Conread position: | 76-337 |
| Cow position: | chrX:10418119-10417852 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 152-556 |
| Cow position: | chrX:13417902-13417480 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 196 |
| Conread position: | 223-576 |
| Cow position: | chrX:2013048-2012692 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 293-525 |
| Cow position: | chrX:6251190-6250966 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 355-581 |
| Cow position: | chrX:10417568-10417351 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 426-581 |
| Cow position: | chrX:29814646-29814810 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 0 |