Cow genome map
| Conread name: | rnco1915b_h18.y2 |
| Conread position: | 17-621 |
| Cow position: | chr1:69182535-69181945 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 38-621 |
| Cow position: | chr1:70203403-70202833 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 130-351 |
| Cow position: | chr10:44457283-44457490 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 4-173 |
| Cow position: | chr13:1618844-1619022 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 170-283 |
| Cow position: | chr13:1618992-1619105 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-583 |
| Cow position: | chr16:7130652-7130098 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 216-387 |
| Cow position: | chr16:7128978-7128806 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 401-608 |
| Cow position: | chr16:7128770-7128574 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 169-621 |
| Cow position: | chr17:38408105-38408549 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 239 |
| Conread position: | 176-364 |
| Cow position: | chr17:42689833-42690025 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 179-364 |
| Cow position: | chr17:42737545-42737734 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 93-204 |
| Cow position: | chr22:10083435-10083324 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-621 |
| Cow position: | chr22:19410207-19410683 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 20 |
| Conread position: | 195-370 |
| Cow position: | chr22:10083225-10083049 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 215-621 |
| Cow position: | chr22:840038-840436 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 15 |
| Conread position: | 361-491 |
| Cow position: | chr22:10082940-10082810 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 123 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 489-621 |
| Cow position: | chr22:10082063-10081931 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 119 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-373 |
| Cow position: | chr23:30246742-30246374 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 160-621 |
| Cow position: | chr24:17027571-17028028 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 151-621 |
| Cow position: | chr25:2095691-2096126 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 33-260 |
| Cow position: | chr28:20002330-20002111 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 81-621 |
| Cow position: | chr28:17580797-17580272 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 249 |
| Conread position: | 269-620 |
| Cow position: | chr28:20001895-20001562 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 307-621 |
| Cow position: | chr28:27243664-27243975 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 173-368 |
| Cow position: | chr29:45631909-45632102 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 434-621 |
| Cow position: | chr29:45632564-45632744 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-594 |
| Cow position: | chr3:13439165-13439746 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 29 |
| Conread position: | 36-541 |
| Cow position: | chr3:23874085-23874580 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 81-339 |
| Cow position: | chr3:58278105-58277837 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 81-492 |
| Cow position: | chr3:41698256-41697843 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 17-371 |
| Cow position: | chr4:42105594-42105245 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 213-495 |
| Cow position: | chr4:4973519-4973797 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 418-619 |
| Cow position: | chr4:42105036-42104839 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 17-602 |
| Cow position: | chr5:12261709-12262245 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 93-495 |
| Cow position: | chr5:32567169-32566769 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 36-182 |
| Cow position: | chr6:58470629-58470490 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-208 |
| Cow position: | chr8:49966909-49967108 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 264-593 |
| Cow position: | chr8:49967132-49967451 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 20-180 |
| Cow position: | chrX:26022162-26022317 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 42-541 |
| Cow position: | chrX:487361-486873 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 525-621 |
| Cow position: | chrX:486868-486772 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |