Cow genome map
| Conread name: | rnco1922b_e14.y1 |
| Conread position: | 14-395 |
| Cow position: | chr10:23263574-23263196 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 27-288 |
| Cow position: | chr10:7515693-7515414 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 29-387 |
| Cow position: | chr10:51208928-51208556 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 74-395 |
| Cow position: | chr10:6716844-6717160 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 90 |
| Conread position: | 149-389 |
| Cow position: | chr10:41389288-41389530 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 32-330 |
| Cow position: | chr11:41227187-41226872 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 217 |
| Conread position: | 40-400 |
| Cow position: | chr11:1851107-1850747 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 70-327 |
| Cow position: | chr11:21614390-21614128 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 70-365 |
| Cow position: | chr11:83372146-83371833 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 72-392 |
| Cow position: | chr11:17256725-17256407 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 76-396 |
| Cow position: | chr11:73465141-73465467 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 14-364 |
| Cow position: | chr12:19417966-19417615 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 149-399 |
| Cow position: | chr13:41311800-41312057 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 72-399 |
| Cow position: | chr15:47260942-47260613 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 149-389 |
| Cow position: | chr15:21961346-21961102 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 188 |
| Conread position: | 14-395 |
| Cow position: | chr16:36311557-36311180 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 140, 40 |
| Conread position: | 17-395 |
| Cow position: | chr16:33622305-33622711 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 149-389 |
| Cow position: | chr17:43988602-43988360 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 72 |
| Conread position: | 25-319 |
| Cow position: | chr18:1393310-1393614 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 47, 206 |
| Conread position: | 14-400 |
| Cow position: | chr2:30124022-30123630 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 152-395 |
| Cow position: | chr2:60927957-60927709 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 68-402 |
| Cow position: | chr20:9539749-9539410 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 210 |
| Conread position: | 3-365 |
| Cow position: | chr21:30164970-30165347 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 32-322 |
| Cow position: | chr22:39477524-39477827 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 133-386 |
| Cow position: | chr22:33480234-33480486 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 166-395 |
| Cow position: | chr23:14300433-14300200 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 75-400 |
| Cow position: | chr24:26907270-26906933 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 67 |
| Conread position: | 39-400 |
| Cow position: | chr25:5432716-5432351 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 141 |
| Conread position: | 14-429 |
| Cow position: | chr26:16719125-16718724 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 79 |
| Conread position: | 76-395 |
| Cow position: | chr26:11635619-11635939 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 166, 199 |
| Conread position: | 70-404 |
| Cow position: | chr29:37045864-37046206 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 78, 119 |
| Conread position: | 19-261 |
| Cow position: | chr3:18632967-18633220 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 70-313 |
| Cow position: | chr3:33277609-33277351 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 101-384 |
| Cow position: | chr3:26487231-26486934 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 251 |
| Conread position: | 53-369 |
| Cow position: | chr5:31254468-31254145 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 171 |
| Conread position: | 70-282 |
| Cow position: | chr5:43343174-43343392 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 70-400 |
| Cow position: | chr5:62359879-62359536 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 165 |
| Conread position: | 73-400 |
| Cow position: | chr5:29866896-29866575 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 79-402 |
| Cow position: | chr5:35946118-35945787 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 70-395 |
| Cow position: | chr6:51329891-51330217 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 15-396 |
| Cow position: | chr7:42406717-42406326 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 40-393 |
| Cow position: | chr7:3787806-3788140 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 62-383 |
| Cow position: | chr7:53229687-53230014 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 143 |
| Conread position: | 71-385 |
| Cow position: | chr9:57900662-57900974 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 264, 71 |
| Conread position: | 16-396 |
| Cow position: | chrX:23330188-23330563 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 23-395 |
| Cow position: | chrX:14186506-14186123 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 148-395 |
| Cow position: | chrX:27602206-27601962 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 15 |