Cow genome map
| Conread name: | rnmm11c_g21.y1 |
| Conread position: | 56-405 |
| Cow position: | chr10:14296815-14296466 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 56-405 |
| Cow position: | chr10:14339503-14339154 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 96-374 |
| Cow position: | chr10:16615169-16614891 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 103-353 |
| Cow position: | chr10:16831064-16831314 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 106-358 |
| Cow position: | chr10:16653128-16652877 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 106-370 |
| Cow position: | chr10:16638505-16638243 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 22-342 |
| Cow position: | chr11:75271185-75271505 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 22-351 |
| Cow position: | chr11:75246983-75247312 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 23-339 |
| Cow position: | chr11:74294281-74294597 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 155 |
| Conread position: | 23-395 |
| Cow position: | chr11:74315101-74315473 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 131, 148 |
| Conread position: | 23-397 |
| Cow position: | chr11:74303102-74302728 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 62-351 |
| Cow position: | chr11:75219590-75219879 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 62-351 |
| Cow position: | chr11:75235151-75235440 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 110-338 |
| Cow position: | chr11:75279840-75280068 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 48 |
| Conread position: | 76-340 |
| Cow position: | chr15:50131396-50131132 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 91, 83 |
| Conread position: | 106-450 |
| Cow position: | chr15:50066946-50067290 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 18-352 |
| Cow position: | chr19:18495481-18495147 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 123, 116 |
| Conread position: | 62-352 |
| Cow position: | chr19:18456295-18456005 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 62-352 |
| Cow position: | chr19:18679035-18678746 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 62-354 |
| Cow position: | chr19:20837684-20837392 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 151, 165 |
| Conread position: | 95-393 |
| Cow position: | chr23:25123065-25123363 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 49-339 |
| Cow position: | chr24:1815290-1815582 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 13-362 |
| Cow position: | chr25:33030508-33030159 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 67-342 |
| Cow position: | chr25:34487083-34486810 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 75-390 |
| Cow position: | chr25:401926-402241 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 95, 82 |
| Conread position: | 22-339 |
| Cow position: | chr29:21188391-21188074 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 150, 136 |
| Conread position: | 22-339 |
| Cow position: | chr29:21207959-21207642 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 150, 136 |
| Conread position: | 37-398 |
| Cow position: | chr29:18876802-18877166 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 167, 275 |
| Conread position: | 59-398 |
| Cow position: | chr29:20217331-20216989 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 99 |
| Conread position: | 72-376 |
| Cow position: | chr29:18715223-18714919 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 126, 85 |
| Conread position: | 2-450 |
| Cow position: | chr6:39619151-39618703 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-450 |
| Cow position: | chr6:39629143-39628695 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-450 |
| Cow position: | chr6:39644406-39643958 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-352 |
| Cow position: | chr7:26931060-26931411 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-416 |
| Cow position: | chr7:26857347-26857764 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 1-450 |
| Cow position: | chr7:26833430-26832979 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 1-450 |
| Cow position: | chr7:26854900-26854451 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 1-450 |
| Cow position: | chr7:26908267-26908716 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 423 |
| Conread position: | 2-405 |
| Cow position: | chr7:27487946-27488347 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 163, 135 |
| Conread position: | 2-449 |
| Cow position: | chr7:27381672-27382119 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-391 |
| Cow position: | chr7:27504142-27504528 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 287 |
| Conread position: | 13-390 |
| Cow position: | chr7:28654842-28655219 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 174 |
| Conread position: | 17-410 |
| Cow position: | chr7:27614835-27614442 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 361 |
| Conread position: | 19-450 |
| Cow position: | chr7:27947269-27946838 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-352 |
| Cow position: | chr7:54118109-54118439 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 149, 138 |
| Conread position: | 22-371 |
| Cow position: | chr7:32774081-32773732 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 22-450 |
| Cow position: | chr7:14395880-14396308 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 193, 181 |
| Conread position: | 22-450 |
| Cow position: | chr7:26873292-26872864 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-376 |
| Cow position: | chr7:8766503-8766838 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 121, 117 |
| Conread position: | 53-449 |
| Cow position: | chr7:27694855-27694459 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 331, 325 |
| Conread position: | 62-353 |
| Cow position: | chr7:27314459-27314750 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 149, 116 |
| Conread position: | 66-336 |
| Cow position: | chr7:27138865-27138596 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 67-365 |
| Cow position: | chr7:27963723-27963425 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-443 |
| Cow position: | chr7:27463572-27463941 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-354 |
| Cow position: | chr7:28629834-28630106 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-406 |
| Cow position: | chr7:27562442-27562118 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-410 |
| Cow position: | chr7:27732279-27731952 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 295 |
| Conread position: | 83-410 |
| Cow position: | chr7:27752271-27752598 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 295 |
| Conread position: | 94-353 |
| Cow position: | chr7:27340667-27340926 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 94 |
| Conread position: | 97-366 |
| Cow position: | chr7:54046417-54046148 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 157, 147 |
| Conread position: | 106-416 |
| Cow position: | chr7:27596215-27595905 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 278, 272 |
| Conread position: | 106-449 |
| Cow position: | chr7:27777576-27777919 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 278, 272 |
| Conread position: | 22-352 |
| Cow position: | chr8:29348882-29349212 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 37-357 |
| Cow position: | chr8:28620643-28620323 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-360 |
| Cow position: | chr8:28633389-28633067 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 109 |
| Conread position: | 37-360 |
| Cow position: | chr8:29340702-29341025 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-354 |
| Cow position: | chr8:51584213-51583912 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 106-380 |
| Cow position: | chr8:51873213-51873487 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 18 |