Cow genome map
| Conread name: | rnms26_l2.y1 |
| Conread position: | 112-443 |
| Cow position: | chr1:32955010-32954673 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 154, 74 |
| Conread position: | 156-436 |
| Cow position: | chr1:63316392-63316096 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 94, 219 |
| Conread position: | 284-418 |
| Cow position: | chr1:43285263-43285127 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 306-429 |
| Cow position: | chr1:9355805-9355930 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 256-428 |
| Cow position: | chr10:63647092-63646917 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 1-444 |
| Cow position: | chr11:13942442-13942870 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 320, 59 |
| Conread position: | 92-411 |
| Cow position: | chr11:49097000-49096683 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 13 |
| Conread position: | 117-421 |
| Cow position: | chr12:4656859-4656559 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 130, 90 |
| Conread position: | 73-415 |
| Cow position: | chr13:21694283-21694625 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 189, 32 |
| Conread position: | 113-428 |
| Cow position: | chr13:40543881-40543572 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 129, 22 |
| Conread position: | 95-443 |
| Cow position: | chr14:35359024-35358674 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 152, 10 |
| Conread position: | 105-267 |
| Cow position: | chr14:12602179-12602021 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 107-423 |
| Cow position: | chr17:22232483-22232158 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 319-439 |
| Cow position: | chr17:21875017-21874895 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 221-429 |
| Cow position: | chr18:40262889-40263105 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 145 |
| Conread position: | 255-436 |
| Cow position: | chr18:30200072-30199882 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 1-409 |
| Cow position: | chr19:33621167-33620741 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 5-263 |
| Cow position: | chr19:22423363-22423101 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 108-407 |
| Cow position: | chr19:22508733-22508428 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 113-324 |
| Cow position: | chr19:42465751-42465544 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 167-429 |
| Cow position: | chr2:58815700-58815433 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 201 |
| Conread position: | 255-429 |
| Cow position: | chr2:24528004-24527827 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 1-429 |
| Cow position: | chr20:27565714-27566128 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 75 |
| Conread position: | 152-429 |
| Cow position: | chr22:44689801-44690084 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 263-427 |
| Cow position: | chr23:38560102-38559936 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 107-429 |
| Cow position: | chr25:36513258-36513565 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 160-429 |
| Cow position: | chr25:21904212-21904489 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 98, 66 |
| Conread position: | 1-443 |
| Cow position: | chr28:22081202-22081674 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 182 |
| Conread position: | 129-347 |
| Cow position: | chr28:4375415-4375187 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 19-426 |
| Cow position: | chr3:82165990-82165615 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 89-374 |
| Cow position: | chr3:56686049-56686325 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 107-341 |
| Cow position: | chr3:19560401-19560178 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 201, 32 |
| Conread position: | 213-429 |
| Cow position: | chr3:35158393-35158186 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 271-443 |
| Cow position: | chr3:65581116-65580951 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 1-418 |
| Cow position: | chr4:30960164-30960569 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 277, 59 |
| Conread position: | 6-314 |
| Cow position: | chr4:47773983-47773698 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 284, 35 |
| Conread position: | 273-443 |
| Cow position: | chr4:44573491-44573667 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 90 |
| Conread position: | 1-436 |
| Cow position: | chr5:50864033-50864473 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 107-421 |
| Cow position: | chr5:44703110-44703424 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 28 |
| Conread position: | 138-429 |
| Cow position: | chr5:70756986-70756707 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 186, 43 |
| Conread position: | 113-429 |
| Cow position: | chr6:31879584-31879262 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 1-432 |
| Cow position: | chr7:58301525-58301111 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 2-429 |
| Cow position: | chr7:32478280-32478709 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 29 |
| Conread position: | 89-429 |
| Cow position: | chr8:20281758-20282093 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 1-429 |
| Cow position: | chr9:47547373-47547794 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 181, 58 |
| Conread position: | 108-460 |
| Cow position: | chr9:26282125-26282471 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 158, 27 |
| Conread position: | 89-429 |
| Cow position: | chrX:26880362-26880703 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 97-429 |
| Cow position: | chrX:10373065-10373429 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 9, 348 |