Cow genome map
| Conread name: | rnms34_n9.y1 |
| Conread position: | 1-182 |
| Cow position: | chr1:51613877-51613703 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 1-268 |
| Cow position: | chr1:60871153-60871414 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 1-310 |
| Cow position: | chr1:26169123-26169422 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 1-314 |
| Cow position: | chr1:37457132-37456829 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 1-322 |
| Cow position: | chr1:79692707-79692386 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 1-322 |
| Cow position: | chr1:102644004-102644309 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 240, 29 |
| Conread position: | 13-322 |
| Cow position: | chr1:7890109-7890409 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 28-322 |
| Cow position: | chr1:25297567-25297287 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 47-279 |
| Cow position: | chr1:13848538-13848762 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 6 |
| Conread position: | 129-313 |
| Cow position: | chr1:71964237-71964425 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 142 |
| Conread position: | 169-314 |
| Cow position: | chr1:83331450-83331599 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 1-274 |
| Cow position: | chr10:2000046-1999785 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 18-322 |
| Cow position: | chr10:37286442-37286748 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 19-269 |
| Cow position: | chr10:37278941-37279181 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 25-313 |
| Cow position: | chr10:52472296-52472579 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 28-268 |
| Cow position: | chr10:10954525-10954752 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 131, 60 |
| Conread position: | 75-322 |
| Cow position: | chr10:36408245-36408474 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 126-322 |
| Cow position: | chr10:7387740-7387927 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-259 |
| Cow position: | chr11:66879304-66879047 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 3-258 |
| Cow position: | chr11:16105067-16104826 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 19-322 |
| Cow position: | chr11:4795985-4796286 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 117 |
| Conread position: | 25-293 |
| Cow position: | chr11:72029933-72030190 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 25-322 |
| Cow position: | chr11:11784122-11784397 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 29-313 |
| Cow position: | chr11:33342037-33341756 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 37-322 |
| Cow position: | chr11:19493701-19493424 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 42-322 |
| Cow position: | chr11:33431335-33431602 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 73 |
| Conread position: | 43-322 |
| Cow position: | chr11:67456698-67456962 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 144, 15 |
| Conread position: | 62-322 |
| Cow position: | chr11:53921493-53921239 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 221-322 |
| Cow position: | chr11:55081084-55080988 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-322 |
| Cow position: | chr12:33544952-33544640 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 59-302 |
| Cow position: | chr12:26231965-26232209 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 1-320 |
| Cow position: | chr13:38688812-38689114 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 1-322 |
| Cow position: | chr13:27916996-27916688 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 137 |
| Conread position: | 1-322 |
| Cow position: | chr13:51792753-51792439 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 25-322 |
| Cow position: | chr13:24755539-24755254 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 162, 26 |
| Conread position: | 32-322 |
| Cow position: | chr13:13188343-13188064 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 1-322 |
| Cow position: | chr14:23803801-23804100 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 1-322 |
| Cow position: | chr14:40191106-40190786 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 3-260 |
| Cow position: | chr14:26835805-26835550 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 1-320 |
| Cow position: | chr15:14213558-14213240 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 7-278 |
| Cow position: | chr15:11617726-11617466 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 7-322 |
| Cow position: | chr15:44028650-44028948 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 16-258 |
| Cow position: | chr15:38836055-38835819 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 22-322 |
| Cow position: | chr15:451258-450970 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 1-294 |
| Cow position: | chr16:53799714-53799425 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 1-321 |
| Cow position: | chr16:28920270-28920586 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 131 |
| Conread position: | 1-322 |
| Cow position: | chr16:42652014-42652327 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 33-227 |
| Cow position: | chr16:50166424-50166611 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 149, 86 |
| Conread position: | 41-261 |
| Cow position: | chr16:5463961-5463738 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 61-322 |
| Cow position: | chr16:17489047-17489296 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 1-322 |
| Cow position: | chr17:42811156-42811461 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 178, 52 |
| Conread position: | 14-322 |
| Cow position: | chr17:20708925-20708638 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 28-322 |
| Cow position: | chr17:26479165-26479455 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 81-296 |
| Cow position: | chr17:23845027-23845246 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 132-314 |
| Cow position: | chr17:9327630-9327814 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 1-322 |
| Cow position: | chr18:41191659-41191964 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 80 |
| Conread position: | 14-180 |
| Cow position: | chr18:4976987-4976827 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 114 |
| Conread position: | 1-322 |
| Cow position: | chr19:24223732-24224045 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 25-308 |
| Cow position: | chr19:21047333-21047057 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 143, 91 |
| Conread position: | 36-279 |
| Cow position: | chr19:2081676-2081902 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 51-322 |
| Cow position: | chr19:26969817-26969556 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 88-320 |
| Cow position: | chr19:49867104-49867328 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 1-268 |
| Cow position: | chr2:57845007-57845271 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 1-309 |
| Cow position: | chr2:9940305-9940606 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 1-314 |
| Cow position: | chr2:33668912-33669209 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 1-322 |
| Cow position: | chr2:45119244-45119565 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-322 |
| Cow position: | chr2:78711994-78712315 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 7-307 |
| Cow position: | chr2:9113365-9113653 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 13-308 |
| Cow position: | chr2:43033434-43033145 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 14-279 |
| Cow position: | chr2:24886458-24886198 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 17-275 |
| Cow position: | chr2:27099966-27100217 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 17-322 |
| Cow position: | chr2:41064484-41064783 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 25-279 |
| Cow position: | chr2:27045315-27045072 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 58-289 |
| Cow position: | chr2:53526551-53526775 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 88-322 |
| Cow position: | chr2:86260644-86260867 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 144-322 |
| Cow position: | chr2:45105976-45106155 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 1-322 |
| Cow position: | chr20:1192805-1192487 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 19-280 |
| Cow position: | chr20:24328122-24328377 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 25-322 |
| Cow position: | chr20:12116141-12116424 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 59-279 |
| Cow position: | chr20:32980822-32980603 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 80-312 |
| Cow position: | chr20:28166753-28166978 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-322 |
| Cow position: | chr21:34817634-34817942 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 29-322 |
| Cow position: | chr21:11776181-11776466 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 94-322 |
| Cow position: | chr21:27105436-27105221 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 1-278 |
| Cow position: | chr22:5924933-5925204 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 1-295 |
| Cow position: | chr22:15047875-15048164 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-322 |
| Cow position: | chr22:12511879-12512192 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 170, 26 |
| Conread position: | 45-298 |
| Cow position: | chr22:39134104-39134350 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 51-320 |
| Cow position: | chr22:44056752-44057024 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 68-322 |
| Cow position: | chr22:15040314-15040561 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 76-322 |
| Cow position: | chr22:28448956-28448719 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 227, 6 |
| Conread position: | 1-321 |
| Cow position: | chr23:12378084-12378393 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 1-322 |
| Cow position: | chr23:19814552-19814863 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 59-322 |
| Cow position: | chr23:28728732-28728485 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 75 |
| Conread position: | 157-322 |
| Cow position: | chr23:38062294-38062470 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-278 |
| Cow position: | chr24:21782364-21782615 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 1-313 |
| Cow position: | chr24:27431537-27431835 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 2-310 |
| Cow position: | chr24:33420975-33420676 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 128-276 |
| Cow position: | chr24:30689252-30689397 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 1-322 |
| Cow position: | chr25:20240606-20240302 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 1-322 |
| Cow position: | chr25:32529671-32529347 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 17-322 |
| Cow position: | chr25:13312025-13311728 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 45-322 |
| Cow position: | chr25:12334420-12334158 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 175-322 |
| Cow position: | chr25:32530071-32529930 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 187-314 |
| Cow position: | chr25:33695327-33695446 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 17-322 |
| Cow position: | chr26:6074741-6075037 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 1-322 |
| Cow position: | chr27:9298486-9298804 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 2-230 |
| Cow position: | chr27:10886768-10886989 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 5-225 |
| Cow position: | chr27:14360965-14361170 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 177, 21 |
| Conread position: | 7-317 |
| Cow position: | chr27:11794181-11793884 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 85-322 |
| Cow position: | chr27:17371825-17372058 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 95-322 |
| Cow position: | chr27:26234693-26234471 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 2-320 |
| Cow position: | chr28:6495108-6495421 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 28-320 |
| Cow position: | chr28:4921661-4921936 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 209, 94 |
| Conread position: | 76-322 |
| Cow position: | chr28:2105518-2105289 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 19-310 |
| Cow position: | chr29:31376941-31376659 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 1-322 |
| Cow position: | chr3:4216714-4217022 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 1-322 |
| Cow position: | chr3:58546635-58546321 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 2-322 |
| Cow position: | chr3:42025678-42025991 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 14-314 |
| Cow position: | chr3:32339102-32338797 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 75-279 |
| Cow position: | chr3:68096125-68096325 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 112, 59 |
| Conread position: | 143-322 |
| Cow position: | chr3:65863932-65863747 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-322 |
| Cow position: | chr4:14417085-14417397 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 32-278 |
| Cow position: | chr4:19492673-19492912 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 155, 82 |
| Conread position: | 1-310 |
| Cow position: | chr5:28887574-28887272 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 1-314 |
| Cow position: | chr5:9578652-9578967 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 1-314 |
| Cow position: | chr5:49094703-49094406 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 1-322 |
| Cow position: | chr5:7422101-7421800 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 18-322 |
| Cow position: | chr5:14823347-14823637 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 29-322 |
| Cow position: | chr5:44494090-44494381 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 1-322 |
| Cow position: | chr6:8136856-8137166 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 25-240 |
| Cow position: | chr6:26978739-26978529 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 28-322 |
| Cow position: | chr6:26714365-26714658 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 40, 199 |
| Conread position: | 38-209 |
| Cow position: | chr6:22496885-22497051 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 58-322 |
| Cow position: | chr6:28990945-28990688 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 129 |
| Conread position: | 1-322 |
| Cow position: | chr7:27318226-27318529 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 145, 34 |
| Conread position: | 38-320 |
| Cow position: | chr7:46716412-46716137 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 89 |
| Conread position: | 59-322 |
| Cow position: | chr7:2969787-2970046 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 132-276 |
| Cow position: | chr7:6985616-6985760 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 133-322 |
| Cow position: | chr7:26970114-26969928 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 145 |
| Conread position: | 1-316 |
| Cow position: | chr8:23514811-23514502 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 187 |
| Conread position: | 1-322 |
| Cow position: | chr8:22213890-22213575 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 1-322 |
| Cow position: | chr8:24649731-24649422 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 2-322 |
| Cow position: | chr8:25311249-25310925 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 159 |
| Conread position: | 5-318 |
| Cow position: | chr8:23494714-23495023 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 19-279 |
| Cow position: | chr8:31621127-31620872 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 43-292 |
| Cow position: | chr8:59785672-59785431 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 146, 90 |
| Conread position: | 72-322 |
| Cow position: | chr8:17698392-17698633 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 66 |
| Conread position: | 145-310 |
| Cow position: | chr8:59134315-59134154 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 133 |
| Conread position: | 1-322 |
| Cow position: | chr9:22450832-22450520 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 16-310 |
| Cow position: | chr9:23398766-23399060 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 25-129 |
| Cow position: | chr9:26867823-26867719 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-322 |
| Cow position: | chr9:20501329-20501612 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 102 |
| Conread position: | 177-322 |
| Cow position: | chr9:26867455-26867314 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 1-303 |
| Cow position: | chrX:29377007-29376718 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 137 |
| Conread position: | 1-320 |
| Cow position: | chrX:36809083-36808764 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 1-320 |
| Cow position: | chrX:39519400-39519712 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 1-322 |
| Cow position: | chrX:9587731-9588033 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 1-322 |
| Cow position: | chrX:29357805-29358116 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 1-322 |
| Cow position: | chrX:35671183-35670863 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 1-322 |
| Cow position: | chrX:35822035-35821719 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 17-253 |
| Cow position: | chrX:15794557-15794794 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 25-314 |
| Cow position: | chrX:12180970-12181260 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 58 |
| Conread position: | 25-322 |
| Cow position: | chrX:35048453-35048165 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 40, 34 |