Non-Coding RNA Search

Cow genome map


           Conread name:
           rova028_g6.y1
        

               Conread position:
               128-370
               

               Cow position:
               chr1:52774554-52774805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               139-346
               

               Cow position:
               chr1:67319346-67319144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               178-362
               

               Cow position:
               chr1:79278529-79278710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 113
               

               Conread position:
               178-468
               

               Cow position:
               chr1:57969130-57969419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               183-362
               

               Cow position:
               chr1:56233116-56232932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 140
               

               Conread position:
               189-352
               

               Cow position:
               chr1:13456052-13455877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               192-372
               

               Cow position:
               chr1:74084295-74084475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               192-466
               

               Cow position:
               chr1:6166143-6165880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               192-467
               

               Cow position:
               chr1:95765190-95765473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               193-331
               

               Cow position:
               chr1:58341513-58341364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 145
               

               Conread position:
               193-340
               

               Cow position:
               chr1:94226649-94226802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               193-473
               

               Cow position:
               chr1:63905578-63905850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               194-346
               

               Cow position:
               chr1:30413486-30413325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr1:89835130-89834975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               197-467
               

               Cow position:
               chr1:57635358-57635077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               201-375
               

               Cow position:
               chr1:57264103-57264275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 47
               

               Conread position:
               201-468
               

               Cow position:
               chr1:102825923-102826194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               217-461
               

               Cow position:
               chr1:39702703-39702455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               217-467
               

               Cow position:
               chr1:22615754-22616007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               220-468
               

               Cow position:
               chr1:10881683-10881431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               222-468
               

               Cow position:
               chr1:15956604-15956350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               224-467
               

               Cow position:
               chr1:98023529-98023773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 154
               

               Conread position:
               249-468
               

               Cow position:
               chr1:4385189-4384958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               254-469
               

               Cow position:
               chr1:32072233-32072455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               139, 123
               

               Conread position:
               290-436
               

               Cow position:
               chr1:7631040-7630895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               134, 91
               

               Conread position:
               102-313
               

               Cow position:
               chr10:56375864-56376082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               189-338
               

               Cow position:
               chr10:2394587-2394745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               189-375
               

               Cow position:
               chr10:41151689-41151497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               189-424
               

               Cow position:
               chr10:16432426-16432668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 200
               

               Conread position:
               189-473
               

               Cow position:
               chr10:65130786-65131080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 207
               

               Conread position:
               197-338
               

               Cow position:
               chr10:35887543-35887685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               197-346
               

               Cow position:
               chr10:44681382-44681226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               197-411
               

               Cow position:
               chr10:48259367-48259579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               201-345
               

               Cow position:
               chr10:56475328-56475179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               206-338
               

               Cow position:
               chr10:2185185-2185049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               221-468
               

               Cow position:
               chr10:29360745-29360491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 159
               

               Conread position:
               222-391
               

               Cow position:
               chr10:48369773-48369938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               230-413
               

               Cow position:
               chr10:37235725-37235901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               232-468
               

               Cow position:
               chr10:15498835-15499079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               185-358
               

               Cow position:
               chr11:43430566-43430744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               189-391
               

               Cow position:
               chr11:42519621-42519414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               189-467
               

               Cow position:
               chr11:20491453-20491154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               193-348
               

               Cow position:
               chr11:15279004-15279162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 65
               

               Conread position:
               194-340
               

               Cow position:
               chr11:55117351-55117193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               195-365
               

               Cow position:
               chr11:6091784-6091953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               195-424
               

               Cow position:
               chr11:80011965-80012187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               197-333
               

               Cow position:
               chr11:27386473-27386612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               197-346
               

               Cow position:
               chr11:17112759-17112912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               197-465
               

               Cow position:
               chr11:63518882-63518602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 146
               

               Conread position:
               202-461
               

               Cow position:
               chr11:56654409-56654142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               232-467
               

               Cow position:
               chr11:46772726-46772969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               235-417
               

               Cow position:
               chr11:15408597-15408419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 5
               

               Conread position:
               284-416
               

               Cow position:
               chr11:16593338-16593213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               126-283
               

               Cow position:
               chr12:42466760-42466606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               178-339
               

               Cow position:
               chr12:40270219-40270384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               193-346
               

               Cow position:
               chr12:27038909-27039071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               194-347
               

               Cow position:
               chr12:19866091-19865936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               197-372
               

               Cow position:
               chr12:27562982-27563166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 137
               

               Conread position:
               201-469
               

               Cow position:
               chr12:4191020-4190740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               201-473
               

               Cow position:
               chr12:30590628-30590326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 124
               

               Conread position:
               206-350
               

               Cow position:
               chr12:2242047-2242194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               234-468
               

               Cow position:
               chr12:17708526-17708292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 149
               

               Conread position:
               94-332
               

               Cow position:
               chr13:17981789-17982027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               94-343
               

               Cow position:
               chr13:4546351-4546603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               135, 39
               

               Conread position:
               101-352
               

               Cow position:
               chr13:52379750-52379499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               134-385
               

               Cow position:
               chr13:46637103-46636840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               190-347
               

               Cow position:
               chr13:4208730-4208564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 126
               

               Conread position:
               193-468
               

               Cow position:
               chr13:14063433-14063158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               6, 104
               

               Conread position:
               194-340
               

               Cow position:
               chr13:9125762-9125919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               194-354
               

               Cow position:
               chr13:16014907-16015067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               195-363
               

               Cow position:
               chr13:52284902-52285084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 133
               

               Conread position:
               198-340
               

               Cow position:
               chr13:18243959-18244102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               201-468
               

               Cow position:
               chr13:25926891-25927150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               288-468
               

               Cow position:
               chr13:53069659-53069839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               138, 47
               

               Conread position:
               121-340
               

               Cow position:
               chr14:14245398-14245626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               5, 136
               

               Conread position:
               185-467
               

               Cow position:
               chr14:41128032-41128313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 125
               

               Conread position:
               193-346
               

               Cow position:
               chr14:7558283-7558122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               193-375
               

               Cow position:
               chr14:12856745-12856935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               194-323
               

               Cow position:
               chr14:33538771-33538638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               194-472
               

               Cow position:
               chr14:23107478-23107769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               41, 226
               

               Conread position:
               195-467
               

               Cow position:
               chr14:43031959-43032231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               197-367
               

               Cow position:
               chr14:8541057-8540885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               197-473
               

               Cow position:
               chr14:19850876-19850590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               201-351
               

               Cow position:
               chr14:15032917-15033071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               206-391
               

               Cow position:
               chr14:33580765-33580943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               222-468
               

               Cow position:
               chr14:36709307-36709573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               232-416
               

               Cow position:
               chr14:12559292-12559106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               234-469
               

               Cow position:
               chr14:45292726-45292492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               94-332
               

               Cow position:
               chr15:23054356-23054596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               136-391
               

               Cow position:
               chr15:3539249-3538997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               139-342
               

               Cow position:
               chr15:23332748-23332534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 190
               

               Conread position:
               156-346
               

               Cow position:
               chr15:16583551-16583356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 163
               

               Conread position:
               185-345
               

               Cow position:
               chr15:23702959-23703128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               186-391
               

               Cow position:
               chr15:14020658-14020870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               191-340
               

               Cow position:
               chr15:9267866-9267714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               192-391
               

               Cow position:
               chr15:6491399-6491194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 197
               

               Conread position:
               193-352
               

               Cow position:
               chr15:12316119-12316286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               197-338
               

               Cow position:
               chr15:21365993-21365852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               197-346
               

               Cow position:
               chr15:36621616-36621774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               201-346
               

               Cow position:
               chr15:34104474-34104622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               201-395
               

               Cow position:
               chr15:4535114-4535301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               206-346
               

               Cow position:
               chr15:20534237-20534094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 131
               

               Conread position:
               213-473
               

               Cow position:
               chr15:32287536-32287284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               189-338
               

               Cow position:
               chr16:53267623-53267470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               193-352
               

               Cow position:
               chr16:25606997-25606829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               193-391
               

               Cow position:
               chr16:46434228-46434432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               193-408
               

               Cow position:
               chr16:36911149-36911360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               197-368
               

               Cow position:
               chr16:26373064-26373239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               198-333
               

               Cow position:
               chr16:47662601-47662459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               201-346
               

               Cow position:
               chr16:820134-819984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               201-466
               

               Cow position:
               chr16:46105534-46105284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               201-469
               

               Cow position:
               chr16:50970863-50970596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               202-469
               

               Cow position:
               chr16:50661065-50661346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               206-468
               

               Cow position:
               chr16:14242253-14241995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               206-468
               

               Cow position:
               chr16:48145526-48145797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               274-468
               

               Cow position:
               chr16:3821009-3820809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               118-468
               

               Cow position:
               chr17:20157630-20157258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               127-467
               

               Cow position:
               chr17:20208816-20209143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               178-375
               

               Cow position:
               chr17:15333760-15333966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 150
               

               Conread position:
               185-344
               

               Cow position:
               chr17:12059149-12059310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               189-473
               

               Cow position:
               chr17:28359786-28359514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               198-345
               

               Cow position:
               chr17:36746395-36746543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               198-438
               

               Cow position:
               chr17:9778176-9777940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               201-360
               

               Cow position:
               chr17:21312883-21313041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 115
               

               Conread position:
               201-390
               

               Cow position:
               chr17:19237118-19236928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               127-338
               

               Cow position:
               chr18:37335046-37334822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               11, 200
               

               Conread position:
               139-469
               

               Cow position:
               chr18:45576693-45577015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               152-332
               

               Cow position:
               chr18:36186274-36186463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               160-467
               

               Cow position:
               chr18:4578582-4578880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               184-467
               

               Cow position:
               chr18:29043475-29043767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               185-436
               

               Cow position:
               chr18:11166852-11166591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 219
               

               Conread position:
               194-420
               

               Cow position:
               chr18:42060939-42060707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               195-338
               

               Cow position:
               chr18:14815478-14815626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               198-338
               

               Cow position:
               chr18:36458788-36458643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               199-338
               

               Cow position:
               chr18:49543330-49543187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               206-340
               

               Cow position:
               chr18:50082401-50082539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               209-429
               

               Cow position:
               chr18:20271174-20271404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 224
               

               Conread position:
               232-417
               

               Cow position:
               chr18:36478013-36477832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               232-467
               

               Cow position:
               chr18:11680538-11680304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               233-467
               

               Cow position:
               chr18:9806227-9805996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               94-361
               

               Cow position:
               chr19:5551917-5552180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               190, 29
               

               Conread position:
               122-391
               

               Cow position:
               chr19:39601999-39602269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               158-391
               

               Cow position:
               chr19:33033531-33033765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               175-465
               

               Cow position:
               chr19:23398864-23399142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 7
               

               Conread position:
               185-332
               

               Cow position:
               chr19:38637912-38638065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               185-465
               

               Cow position:
               chr19:7492328-7492048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               189-468
               

               Cow position:
               chr19:19924711-19925005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               193-333
               

               Cow position:
               chr19:18621792-18621642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               193-468
               

               Cow position:
               chr19:34986320-34986047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               201-473
               

               Cow position:
               chr19:43418286-43418011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               206-329
               

               Cow position:
               chr19:30925453-30925578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               81-326
               

               Cow position:
               chr2:79212750-79212996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               94-319
               

               Cow position:
               chr2:25056939-25056711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               94-346
               

               Cow position:
               chr2:717510-717758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               103-467
               

               Cow position:
               chr2:53496914-53497251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               129-391
               

               Cow position:
               chr2:14749562-14749286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               136-358
               

               Cow position:
               chr2:11706369-11706131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               147-391
               

               Cow position:
               chr2:36044410-36044666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               188-369
               

               Cow position:
               chr2:469555-469368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               189-424
               

               Cow position:
               chr2:40492272-40492036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 197
               

               Conread position:
               189-468
               

               Cow position:
               chr2:32408593-32408866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               199, 44
               

               Conread position:
               190-468
               

               Cow position:
               chr2:42309654-42309956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               192-342
               

               Cow position:
               chr2:32243887-32244046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               193-330
               

               Cow position:
               chr2:40680031-40679883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr2:76313970-76314121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 109
               

               Conread position:
               197-364
               

               Cow position:
               chr2:26339929-26340092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               205-362
               

               Cow position:
               chr2:29734391-29734220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               206-409
               

               Cow position:
               chr2:25217193-25216976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               224-472
               

               Cow position:
               chr2:46745782-46745528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               102-469
               

               Cow position:
               chr20:10575778-10576142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               189, 14
               

               Conread position:
               151-424
               

               Cow position:
               chr20:11975131-11975409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               153-468
               

               Cow position:
               chr20:16157376-16157693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               178-344
               

               Cow position:
               chr20:6571282-6571110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               178-356
               

               Cow position:
               chr20:40185726-40185907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               190-332
               

               Cow position:
               chr20:27001332-27001184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 130
               

               Conread position:
               190-346
               

               Cow position:
               chr20:18185509-18185355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               193-364
               

               Cow position:
               chr20:13465452-13465276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               194-467
               

               Cow position:
               chr20:40511828-40512098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               197-465
               

               Cow position:
               chr20:22038258-22038540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               198-346
               

               Cow position:
               chr20:33435236-33435389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               206-467
               

               Cow position:
               chr20:7442202-7442455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               208-468
               

               Cow position:
               chr20:10759550-10759799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               228-391
               

               Cow position:
               chr20:9006647-9006798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               107-468
               

               Cow position:
               chr21:12801698-12802072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               138-315
               

               Cow position:
               chr21:30192174-30192358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               140-336
               

               Cow position:
               chr21:37282326-37282116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               185-346
               

               Cow position:
               chr21:15584452-15584606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 99
               

               Conread position:
               191-468
               

               Cow position:
               chr21:3047642-3047373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               191-468
               

               Cow position:
               chr21:5137532-5137798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               193-366
               

               Cow position:
               chr21:14464537-14464354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               197-391
               

               Cow position:
               chr21:45355790-45355588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               197-468
               

               Cow position:
               chr21:8618228-8617946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 188
               

               Conread position:
               201-346
               

               Cow position:
               chr21:31278728-31278576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               201-391
               

               Cow position:
               chr21:18780023-18780216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               206-326
               

               Cow position:
               chr21:643273-643151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 120
               

               Conread position:
               224-424
               

               Cow position:
               chr21:34835504-34835693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 78
               

               Conread position:
               101-470
               

               Cow position:
               chr22:17677923-17677545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               139-331
               

               Cow position:
               chr22:29574885-29575081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               165-318
               

               Cow position:
               chr22:39452515-39452346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               178-391
               

               Cow position:
               chr22:34750586-34750376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 205
               

               Conread position:
               191-344
               

               Cow position:
               chr22:22463399-22463243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               193-374
               

               Cow position:
               chr22:9521037-9520852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               197-368
               

               Cow position:
               chr22:9278781-9278613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               201-391
               

               Cow position:
               chr22:16768852-16769042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 183
               

               Conread position:
               201-424
               

               Cow position:
               chr22:23854857-23854632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               201-469
               

               Cow position:
               chr22:44389996-44390278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               6, 198
               

               Conread position:
               202-366
               

               Cow position:
               chr22:845784-845613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               204-468
               

               Cow position:
               chr22:12892687-12892959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               206-349
               

               Cow position:
               chr22:26339634-26339486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               206-468
               

               Cow position:
               chr22:19775553-19775807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               86, 114
               

               Conread position:
               206-468
               

               Cow position:
               chr22:30963999-30963747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               207-356
               

               Cow position:
               chr22:1710446-1710296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 128
               

               Conread position:
               222-391
               

               Cow position:
               chr22:534349-534178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               230-468
               

               Cow position:
               chr22:22612961-22612723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 153
               

               Conread position:
               290-473
               

               Cow position:
               chr22:17125256-17125077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               147, 85
               

               Conread position:
               107-468
               

               Cow position:
               chr23:17092504-17092864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               189-446
               

               Cow position:
               chr23:22588364-22588627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 189
               

               Conread position:
               193-340
               

               Cow position:
               chr23:7937646-7937798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               194-356
               

               Cow position:
               chr23:11434365-11434532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               198-344
               

               Cow position:
               chr23:7596442-7596594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               206-346
               

               Cow position:
               chr23:39793334-39793188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-429
               

               Cow position:
               chr23:29242807-29242589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               277-468
               

               Cow position:
               chr23:2269489-2269666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               193-338
               

               Cow position:
               chr24:33238679-33238832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               194-369
               

               Cow position:
               chr24:33723975-33724175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               197-473
               

               Cow position:
               chr24:27096549-27096275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               201-465
               

               Cow position:
               chr24:39259027-39258761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 136
               

               Conread position:
               201-468
               

               Cow position:
               chr24:43432654-43432407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               222-468
               

               Cow position:
               chr24:40184459-40184200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 119
               

               Conread position:
               222-473
               

               Cow position:
               chr24:23695062-23695307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               246-411
               

               Cow position:
               chr24:31845638-31845801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 95
               

               Conread position:
               130-350
               

               Cow position:
               chr25:22909890-22910117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               155-346
               

               Cow position:
               chr25:25866856-25866661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 154
               

               Conread position:
               185-468
               

               Cow position:
               chr25:35612401-35612690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               187-424
               

               Cow position:
               chr25:24405840-24406078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               190-468
               

               Cow position:
               chr25:12081427-12081710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 93
               

               Conread position:
               192-347
               

               Cow position:
               chr25:26087412-26087245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               192-358
               

               Cow position:
               chr25:40321398-40321573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               192-406
               

               Cow position:
               chr25:10448816-10449022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               193-332
               

               Cow position:
               chr25:4049923-4049777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               194-333
               

               Cow position:
               chr25:17712422-17712278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               195-458
               

               Cow position:
               chr25:34669130-34668868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               197-346
               

               Cow position:
               chr25:8347391-8347240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               201-473
               

               Cow position:
               chr25:27510350-27510620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               217-468
               

               Cow position:
               chr25:18310662-18310415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               230-468
               

               Cow position:
               chr25:18013249-18013001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               140-469
               

               Cow position:
               chr26:34035628-34035303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               182-350
               

               Cow position:
               chr26:19637099-19636925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               189-370
               

               Cow position:
               chr26:12216764-12216579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               232-438
               

               Cow position:
               chr26:19763036-19763234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               239-473
               

               Cow position:
               chr26:4651034-4650813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               193-391
               

               Cow position:
               chr27:6523112-6523310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               193-468
               

               Cow position:
               chr27:8048671-8048376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               201-348
               

               Cow position:
               chr27:30765108-30765257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               230-424
               

               Cow position:
               chr27:25998809-25999007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               274-468
               

               Cow position:
               chr27:7648417-7648223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               102-468
               

               Cow position:
               chr28:22081566-22081197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               128-342
               

               Cow position:
               chr28:21382692-21382468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 196
               

               Conread position:
               185-350
               

               Cow position:
               chr28:16252950-16253120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               190-344
               

               Cow position:
               chr28:19133690-19133524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               194-340
               

               Cow position:
               chr28:23231168-23231321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 133
               

               Conread position:
               198-346
               

               Cow position:
               chr28:13371279-13371429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 104
               

               Conread position:
               199-340
               

               Cow position:
               chr28:7372358-7372506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               201-329
               

               Cow position:
               chr28:16109833-16109700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               84-290
               

               Cow position:
               chr29:4405690-4405897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               100-344
               

               Cow position:
               chr29:32809450-32809194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               126-468
               

               Cow position:
               chr29:2885488-2885846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               129-391
               

               Cow position:
               chr29:18695218-18694942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               133-348
               

               Cow position:
               chr29:19601387-19601607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               99, 186
               

               Conread position:
               189-391
               

               Cow position:
               chr29:21925108-21924899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 134
               

               Conread position:
               197-420
               

               Cow position:
               chr29:41530732-41530515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               92, 27
               

               Conread position:
               198-342
               

               Cow position:
               chr29:29057069-29056919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               201-473
               

               Cow position:
               chr29:16195734-16195467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               36, 178
               

               Conread position:
               232-468
               

               Cow position:
               chr29:42268540-42268299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               103-392
               

               Cow position:
               chr3:58130963-58130670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               115-469
               

               Cow position:
               chr3:42914402-42914044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               126-350
               

               Cow position:
               chr3:77065688-77065902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               126-350
               

               Cow position:
               chr3:77067611-77067825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               127-340
               

               Cow position:
               chr3:58285949-58286182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               130-469
               

               Cow position:
               chr3:16885949-16886293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               136-470
               

               Cow position:
               chr3:33468553-33468880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               185-340
               

               Cow position:
               chr3:41367105-41367267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 136
               

               Conread position:
               193-473
               

               Cow position:
               chr3:73467486-73467204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               197-468
               

               Cow position:
               chr3:54050152-54050449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               201-368
               

               Cow position:
               chr3:13329915-13330084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               91, 115
               

               Conread position:
               202-465
               

               Cow position:
               chr3:56513-56767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 101
               

               Conread position:
               217-468
               

               Cow position:
               chr3:53415067-53414802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               225-473
               

               Cow position:
               chr3:36085928-36086176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               35, 108
               

               Conread position:
               96-344
               

               Cow position:
               chr4:14737913-14737663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               139-338
               

               Cow position:
               chr4:5777090-5777296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 114
               

               Conread position:
               194-338
               

               Cow position:
               chr4:44496266-44496118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr4:11201702-11201543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               197-338
               

               Cow position:
               chr4:37342995-37342851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               197-346
               

               Cow position:
               chr4:51903484-51903328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               201-470
               

               Cow position:
               chr4:43837597-43837328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               202-466
               

               Cow position:
               chr4:27287235-27287506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               207-391
               

               Cow position:
               chr4:44612875-44612692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               222-391
               

               Cow position:
               chr4:26985165-26984998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               222-424
               

               Cow position:
               chr4:9714583-9714387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               230-391
               

               Cow position:
               chr4:9912573-9912423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               230-468
               

               Cow position:
               chr4:58687592-58687824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               232-391
               

               Cow position:
               chr4:55523216-55523055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               232-467
               

               Cow position:
               chr4:9482376-9482609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               59, 102
               

               Conread position:
               232-468
               

               Cow position:
               chr4:34043910-34044141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               233-391
               

               Cow position:
               chr4:3251694-3251855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               234-468
               

               Cow position:
               chr4:61624754-61624988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               192, 50
               

               Conread position:
               238-391
               

               Cow position:
               chr4:59105974-59106134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               123-468
               

               Cow position:
               chr5:51360935-51360569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               185-399
               

               Cow position:
               chr5:24837016-24837233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               185-468
               

               Cow position:
               chr5:28230084-28229798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               188-465
               

               Cow position:
               chr5:50900831-50900546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               192-366
               

               Cow position:
               chr5:25225733-25225910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               193-344
               

               Cow position:
               chr5:26562077-26561913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               201-468
               

               Cow position:
               chr5:57156686-57156418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               206-346
               

               Cow position:
               chr5:42845699-42845841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 101
               

               Conread position:
               229-391
               

               Cow position:
               chr5:52162480-52162317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               229-467
               

               Cow position:
               chr5:57890378-57890143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               232-467
               

               Cow position:
               chr5:2309688-2309908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               232-471
               

               Cow position:
               chr5:15317296-15317065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               162, 75
               

               Conread position:
               254-440
               

               Cow position:
               chr5:60960176-60959990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 128
               

               Conread position:
               94-408
               

               Cow position:
               chr6:8543463-8543147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               129-391
               

               Cow position:
               chr6:1889080-1889345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               136-450
               

               Cow position:
               chr6:1562129-1561807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 252
               

               Conread position:
               146-330
               

               Cow position:
               chr6:16676602-16676412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 168
               

               Conread position:
               191-467
               

               Cow position:
               chr6:20420309-20420025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               193-329
               

               Cow position:
               chr6:10423107-10422964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               197-338
               

               Cow position:
               chr6:50119860-50120006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               198-360
               

               Cow position:
               chr6:31564409-31564574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 129
               

               Conread position:
               201-346
               

               Cow position:
               chr6:16411116-16410969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 115
               

               Conread position:
               201-468
               

               Cow position:
               chr6:66433869-66433601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               91, 197
               

               Conread position:
               206-340
               

               Cow position:
               chr6:5302488-5302625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               206-346
               

               Cow position:
               chr6:35181337-35181480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               206-391
               

               Cow position:
               chr6:65846535-65846705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               232-395
               

               Cow position:
               chr6:9452883-9453035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               124-422
               

               Cow position:
               chr7:68522826-68523135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               147-467
               

               Cow position:
               chr7:34569185-34568855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               160-468
               

               Cow position:
               chr7:25015158-25015484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               160-468
               

               Cow position:
               chr7:25023496-25023814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               185-362
               

               Cow position:
               chr7:20827674-20827856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               189-468
               

               Cow position:
               chr7:19616761-19617048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               191-346
               

               Cow position:
               chr7:40894461-40894296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               193-333
               

               Cow position:
               chr7:61098832-61098982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               194-424
               

               Cow position:
               chr7:22153088-22152860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 103
               

               Conread position:
               195-333
               

               Cow position:
               chr7:64949047-64948910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               197-346
               

               Cow position:
               chr7:268923-268771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               197-434
               

               Cow position:
               chr7:22730139-22729903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 148
               

               Conread position:
               198-346
               

               Cow position:
               chr7:15608345-15608186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               198-356
               

               Cow position:
               chr7:59688467-59688310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               201-467
               

               Cow position:
               chr7:25867579-25867853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               30, 182
               

               Conread position:
               230-468
               

               Cow position:
               chr7:50095274-50095041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               234-467
               

               Cow position:
               chr7:52130878-52131116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               102-424
               

               Cow position:
               chr8:32719976-32719644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               121-331
               

               Cow position:
               chr8:9671839-9671631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               185-420
               

               Cow position:
               chr8:6073903-6074123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               188-468
               

               Cow position:
               chr8:58385575-58385291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               189-402
               

               Cow position:
               chr8:44664667-44664883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 199
               

               Conread position:
               189-466
               

               Cow position:
               chr8:54231204-54230931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               190-471
               

               Cow position:
               chr8:26877360-26877072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 153
               

               Conread position:
               193-473
               

               Cow position:
               chr8:25677161-25677441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               197-347
               

               Cow position:
               chr8:20339184-20339028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               201-366
               

               Cow position:
               chr8:7104511-7104679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               201-473
               

               Cow position:
               chr8:44437662-44437384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               33, 205
               

               Conread position:
               206-350
               

               Cow position:
               chr8:22755910-22755763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               206-467
               

               Cow position:
               chr8:16093168-16092906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 179
               

               Conread position:
               94-343
               

               Cow position:
               chr9:6210766-6210522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               107, 21
               

               Conread position:
               134-338
               

               Cow position:
               chr9:49271275-49271062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               181-469
               

               Cow position:
               chr9:32688693-32688385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               182-469
               

               Cow position:
               chr9:30055996-30056319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               189-344
               

               Cow position:
               chr9:34568609-34568460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               193-467
               

               Cow position:
               chr9:25958552-25958838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               194-333
               

               Cow position:
               chr9:34468450-34468310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               194-421
               

               Cow position:
               chr9:42173056-42172827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               197-343
               

               Cow position:
               chr9:3070279-3070130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               198-364
               

               Cow position:
               chr9:35533811-35533638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               201-468
               

               Cow position:
               chr9:5399862-5400147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 111
               

               Conread position:
               206-331
               

               Cow position:
               chr9:36843983-36844112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               206-354
               

               Cow position:
               chr9:49689084-49689241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               235-473
               

               Cow position:
               chr9:8570917-8571156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               191, 50
               

               Conread position:
               255-424
               

               Cow position:
               chr9:25238431-25238601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               79-468
               

               Cow position:
               chrX:42530434-42530812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               101-315
               

               Cow position:
               chrX:18248311-18248102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               124-346
               

               Cow position:
               chrX:25281473-25281708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               126-442
               

               Cow position:
               chrX:905335-905028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               127-338
               

               Cow position:
               chrX:18293923-18293700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 199
               

               Conread position:
               127-358
               

               Cow position:
               chrX:4043859-4044102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               139-323
               

               Cow position:
               chrX:2186240-2186041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               142-429
               

               Cow position:
               chrX:20129006-20129286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               185-346
               

               Cow position:
               chrX:30832916-30833078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 113
               

               Conread position:
               185-346
               

               Cow position:
               chrX:35268813-35268650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               185-354
               

               Cow position:
               chrX:27394089-27394262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               189-468
               

               Cow position:
               chrX:16284018-16284302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 195
               

               Conread position:
               189-468
               

               Cow position:
               chrX:29032336-29032058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               192-408
               

               Cow position:
               chrX:37138053-37138268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               193-332
               

               Cow position:
               chrX:25283229-25283372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               196-468
               

               Cow position:
               chrX:44961666-44961385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               197-333
               

               Cow position:
               chrX:42855329-42855181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               201-331
               

               Cow position:
               chrX:42247272-42247409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               201-360
               

               Cow position:
               chrX:4768657-4768496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               203-346
               

               Cow position:
               chrX:32870872-32871026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               206-468
               

               Cow position:
               chrX:20168115-20167826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               222-352
               

               Cow position:
               chrX:6563398-6563266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               223-468
               

               Cow position:
               chrX:9954026-9953792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               230-466
               

               Cow position:
               chrX:22624359-22624130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 106
               

               Conread position:
               231-392
               

               Cow position:
               chrX:48578293-48578141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               232-447
               

               Cow position:
               chrX:24132275-24132491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               232-449
               

               Cow position:
               chrX:33519494-33519270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 160
               

               Conread position:
               232-468
               

               Cow position:
               chrX:9855177-9854951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               301-467
               

               Cow position:
               chrX:10394490-10394316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               125, 0
Conread position:	128-370
Cow position:	chr1:52774554-52774805 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	180
Alignm E-value:	7e-36
Alignm gaps (pig, cow):	65, 0
Conread position:	139-346
Cow position:	chr1:67319346-67319144 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	149
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	111, 40
Conread position:	178-362
Cow position:	chr1:79278529-79278710 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	141
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	21, 113
Conread position:	178-468
Cow position:	chr1:57969130-57969419 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	196
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	21, 59
Conread position:	183-362
Cow position:	chr1:56233116-56232932 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	143
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	50, 140
Conread position:	189-352
Cow position:	chr1:13456052-13455877 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	133
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	11, 0
Conread position:	192-372
Cow position:	chr1:74084295-74084475 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	140
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	42, 81
Conread position:	192-466
Cow position:	chr1:6166143-6165880 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	191
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	91, 48
Conread position:	192-467
Cow position:	chr1:95765190-95765473 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	210
Alignm E-value:	5.00264e-43
Alignm gaps (pig, cow):	26, 20
Conread position:	193-331
Cow position:	chr1:58341513-58341364 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	118
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	39, 145
Conread position:	193-340
Cow position:	chr1:94226649-94226802 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	115
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	6, 0
Conread position:	193-473
Cow position:	chr1:63905578-63905850 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	194
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	18, 39
Conread position:	194-346
Cow position:	chr1:30413486-30413325 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	123
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	39, 0
Conread position:	197-467
Cow position:	chr1:57635358-57635077 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	204
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	26, 44
Conread position:	201-375
Cow position:	chr1:57264103-57264275 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	140
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	84, 47
Conread position:	201-468
Cow position:	chr1:102825923-102826194 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	181
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	34, 118
Conread position:	217-461
Cow position:	chr1:39702703-39702455 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	174
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	26, 110
Conread position:	217-467
Cow position:	chr1:22615754-22616007 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	172
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	72, 17
Conread position:	220-468
Cow position:	chr1:10881683-10881431 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	183
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	73, 12
Conread position:	222-468
Cow position:	chr1:15956604-15956350 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	186
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	57, 15