Cow genome map
| Conread name: | rpfco0124_o15.y1 |
| Conread position: | 1-288 |
| Cow position: | chr1:31421034-31421323 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 34 |
| Conread position: | 40-402 |
| Cow position: | chr1:61737616-61737975 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 155-408 |
| Cow position: | chr1:38396962-38396725 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 92, 24 |
| Conread position: | 1-368 |
| Cow position: | chr10:39879793-39880153 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 84-402 |
| Cow position: | chr10:6259928-6260247 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 1-330 |
| Cow position: | chr11:30188065-30187736 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 39 |
| Conread position: | 114-408 |
| Cow position: | chr11:36713024-36713320 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 6-402 |
| Cow position: | chr13:22184968-22185365 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 164-324 |
| Cow position: | chr13:54142247-54142080 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 1-365 |
| Cow position: | chr14:34043515-34043853 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 230, 39 |
| Conread position: | 1-365 |
| Cow position: | chr14:38815655-38816033 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 190 |
| Conread position: | 1-408 |
| Cow position: | chr14:33488101-33487678 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 188 |
| Conread position: | 4-408 |
| Cow position: | chr15:498905-498494 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 88-408 |
| Cow position: | chr15:11298333-11298660 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 121, 277 |
| Conread position: | 1-408 |
| Cow position: | chr16:25171156-25170725 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 312 |
| Conread position: | 226-408 |
| Cow position: | chr18:4884836-4885013 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 1-368 |
| Cow position: | chr2:11692577-11692226 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 230, 30 |
| Conread position: | 1-408 |
| Cow position: | chr2:63978343-63977928 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 93 |
| Conread position: | 140-408 |
| Cow position: | chr2:77208950-77208672 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 1-398 |
| Cow position: | chr22:36551964-36552352 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 28 |
| Conread position: | 2-409 |
| Cow position: | chr22:36580311-36580718 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 20-390 |
| Cow position: | chr22:8148000-8148356 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 8 |
| Conread position: | 120-407 |
| Cow position: | chr22:36591063-36591355 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 149-408 |
| Cow position: | chr22:297594-297851 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 8-408 |
| Cow position: | chr23:26837151-26836743 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 113 |
| Conread position: | 1-407 |
| Cow position: | chr28:5801539-5801114 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 111-408 |
| Cow position: | chr28:29436431-29436742 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 199 |
| Conread position: | 11-408 |
| Cow position: | chr29:8061999-8062399 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 36 |
| Conread position: | 1-356 |
| Cow position: | chr3:37625394-37625030 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 1-408 |
| Cow position: | chr3:70887564-70887142 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 1-408 |
| Cow position: | chr4:19251783-19251406 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 165-410 |
| Cow position: | chr5:58054918-58055174 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 213-408 |
| Cow position: | chr5:18401883-18402084 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 58-304 |
| Cow position: | chr6:34025675-34025431 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 190, 50 |
| Conread position: | 133-408 |
| Cow position: | chr6:35434473-35434194 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 208-408 |
| Cow position: | chr6:10631220-10631023 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 1-408 |
| Cow position: | chr7:41875716-41876121 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 68 |
| Conread position: | 213-408 |
| Cow position: | chr9:64159699-64159504 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-408 |
| Cow position: | chrX:2012366-2012759 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 7-401 |
| Cow position: | chrX:6250136-6250543 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 86-408 |
| Cow position: | chrX:29815065-29814737 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 21 |