Cow genome map
| Conread name: | rpfco0133_j17.y1 |
| Conread position: | 11-305 |
| Cow position: | chr1:43821790-43822092 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 93 |
| Conread position: | 13-298 |
| Cow position: | chr1:32630408-32630683 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 213, 41 |
| Conread position: | 13-305 |
| Cow position: | chr1:55043607-55043314 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 84 |
| Conread position: | 14-298 |
| Cow position: | chr1:98412379-98412652 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 32-294 |
| Cow position: | chr1:73761875-73761605 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 9 |
| Conread position: | 109-305 |
| Cow position: | chr1:101550966-101551172 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 193-304 |
| Cow position: | chr1:61735839-61735728 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-305 |
| Cow position: | chr10:9517299-9517595 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 89 |
| Conread position: | 11-305 |
| Cow position: | chr10:10046669-10046364 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 11-305 |
| Cow position: | chr10:50016606-50016305 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 89 |
| Conread position: | 13-304 |
| Cow position: | chr10:40376670-40376963 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 87 |
| Conread position: | 18-305 |
| Cow position: | chr10:35791251-35791545 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 82 |
| Conread position: | 21-298 |
| Cow position: | chr10:40255935-40256212 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 181, 85 |
| Conread position: | 113-305 |
| Cow position: | chr10:61922826-61922632 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 193-303 |
| Cow position: | chr10:24296587-24296477 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-305 |
| Cow position: | chr10:25390-25502 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-305 |
| Cow position: | chr10:15292809-15292921 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-305 |
| Cow position: | chr10:54375868-54375756 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-305 |
| Cow position: | chr11:40819250-40818955 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 173, 54 |
| Conread position: | 11-298 |
| Cow position: | chr11:7120632-7120342 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 11-298 |
| Cow position: | chr11:25808365-25808073 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 69, 104 |
| Conread position: | 11-305 |
| Cow position: | chr11:32956520-32956224 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 11-305 |
| Cow position: | chr11:32977710-32977407 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 11-305 |
| Cow position: | chr11:64029870-64029566 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 13-291 |
| Cow position: | chr11:70424706-70424992 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 14-305 |
| Cow position: | chr11:4032165-4031875 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 113, 86 |
| Conread position: | 17-294 |
| Cow position: | chr11:61427026-61427293 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 18-298 |
| Cow position: | chr11:27386941-27386657 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 88 |
| Conread position: | 28-305 |
| Cow position: | chr11:26118664-26118372 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 130, 72 |
| Conread position: | 32-305 |
| Cow position: | chr11:65409752-65409472 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 155, 11 |
| Conread position: | 33-296 |
| Cow position: | chr11:43526740-43526475 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 56-305 |
| Cow position: | chr11:43593442-43593682 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 104-305 |
| Cow position: | chr11:16900742-16900954 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 11-298 |
| Cow position: | chr12:43036667-43036374 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 11-305 |
| Cow position: | chr12:33297230-33297528 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 16-298 |
| Cow position: | chr12:48416148-48415869 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 43-297 |
| Cow position: | chr12:3600495-3600231 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 68-304 |
| Cow position: | chr12:31532969-31532744 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 11-303 |
| Cow position: | chr13:25891939-25892221 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 63-298 |
| Cow position: | chr13:31757157-31756911 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 137, 37 |
| Conread position: | 193-305 |
| Cow position: | chr13:33876052-33875939 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-303 |
| Cow position: | chr14:20863662-20863960 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 11-298 |
| Cow position: | chr14:9103485-9103782 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 160, 86 |
| Conread position: | 11-304 |
| Cow position: | chr14:41716956-41716665 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 91-303 |
| Cow position: | chr14:22912108-22911896 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 17-305 |
| Cow position: | chr15:25133235-25133529 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 83 |
| Conread position: | 23-305 |
| Cow position: | chr15:6588655-6588372 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 171, 61 |
| Conread position: | 34-298 |
| Cow position: | chr15:50323717-50323447 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 70 |
| Conread position: | 100-298 |
| Cow position: | chr15:16475799-16475996 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 186-305 |
| Cow position: | chr15:23716553-23716671 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 11-305 |
| Cow position: | chr16:14385354-14385651 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 176, 89 |
| Conread position: | 17-305 |
| Cow position: | chr16:49142145-49141850 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 87 |
| Conread position: | 39-305 |
| Cow position: | chr16:1957788-1957524 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 65-298 |
| Cow position: | chr16:15974368-15974130 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 97-305 |
| Cow position: | chr16:49388637-49388860 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 99-305 |
| Cow position: | chr16:5363350-5363563 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 193-305 |
| Cow position: | chr16:31978592-31978480 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-297 |
| Cow position: | chr17:20078200-20077917 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 38-297 |
| Cow position: | chr17:41394226-41393968 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 11-305 |
| Cow position: | chr18:6103717-6103427 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 11-305 |
| Cow position: | chr18:8726399-8726702 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 56 |
| Conread position: | 11-305 |
| Cow position: | chr18:41837388-41837093 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 160, 89 |
| Conread position: | 12-305 |
| Cow position: | chr18:37509661-37509963 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 88 |
| Conread position: | 11-305 |
| Cow position: | chr19:10080237-10080528 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-305 |
| Cow position: | chr19:33945274-33945568 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 89 |
| Conread position: | 13-305 |
| Cow position: | chr19:12776951-12777250 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 87 |
| Conread position: | 17-305 |
| Cow position: | chr19:40015879-40015586 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 83 |
| Conread position: | 57-288 |
| Cow position: | chr19:18115704-18115461 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 193-304 |
| Cow position: | chr19:7472967-7473077 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 11-298 |
| Cow position: | chr2:19014501-19014782 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 11-305 |
| Cow position: | chr2:72930940-72930639 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 89 |
| Conread position: | 11-305 |
| Cow position: | chr20:3034562-3034848 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 93 |
| Conread position: | 193-304 |
| Cow position: | chr20:22007095-22007206 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-305 |
| Cow position: | chr21:4035511-4035221 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 159, 89 |
| Conread position: | 11-305 |
| Cow position: | chr21:16278178-16278483 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 78 |
| Conread position: | 11-305 |
| Cow position: | chr21:27521915-27521621 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 59 |
| Conread position: | 50-305 |
| Cow position: | chr21:46849593-46849347 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 82-305 |
| Cow position: | chr21:35898082-35897849 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 11-305 |
| Cow position: | chr22:3324957-3325256 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 11-305 |
| Cow position: | chr22:26759570-26759875 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 92, 240 |
| Conread position: | 13-305 |
| Cow position: | chr22:6498132-6497832 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 87 |
| Conread position: | 66-305 |
| Cow position: | chr22:2403358-2403593 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 67-305 |
| Cow position: | chr22:4631463-4631711 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 193-305 |
| Cow position: | chr22:30190556-30190668 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-298 |
| Cow position: | chr23:11712101-11711798 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 96 |
| Conread position: | 7-305 |
| Cow position: | chr23:26066504-26066811 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 151, 93 |
| Conread position: | 11-298 |
| Cow position: | chr23:26093627-26093333 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 90 |
| Conread position: | 11-305 |
| Cow position: | chr23:11376717-11376421 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 89 |
| Conread position: | 13-302 |
| Cow position: | chr23:28118681-28118393 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 32 |
| Conread position: | 18-305 |
| Cow position: | chr23:38940468-38940754 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 42 |
| Conread position: | 11-298 |
| Cow position: | chr24:11748416-11748126 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 93 |
| Conread position: | 14-305 |
| Cow position: | chr25:37469182-37469484 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 11-274 |
| Cow position: | chr26:10966363-10966094 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 170, 21 |
| Conread position: | 11-298 |
| Cow position: | chr26:18287615-18287900 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 11-298 |
| Cow position: | chr27:3340324-3340043 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 89 |
| Conread position: | 32-305 |
| Cow position: | chr27:26330550-26330824 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 68 |
| Conread position: | 34-301 |
| Cow position: | chr27:30765846-30765582 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 111-305 |
| Cow position: | chr27:28036456-28036665 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 145 |
| Conread position: | 11-305 |
| Cow position: | chr28:6484846-6484560 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-305 |
| Cow position: | chr28:10589611-10589315 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 193-305 |
| Cow position: | chr28:746772-746884 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-295 |
| Cow position: | chr29:11003805-11004084 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 194, 18 |
| Conread position: | 23-305 |
| Cow position: | chr29:32543769-32544057 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 77 |
| Conread position: | 193-304 |
| Cow position: | chr29:9332739-9332850 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-297 |
| Cow position: | chr3:37020691-37020399 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 213, 89 |
| Conread position: | 11-298 |
| Cow position: | chr3:19978067-19977776 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 11-305 |
| Cow position: | chr3:16752852-16752562 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 60 |
| Conread position: | 11-305 |
| Cow position: | chr3:74233603-74233895 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 11-305 |
| Cow position: | chr3:75728192-75727904 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 16 |
| Conread position: | 12-298 |
| Cow position: | chr3:12750430-12750701 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 26-302 |
| Cow position: | chr3:37040840-37041122 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 110-298 |
| Cow position: | chr3:57554360-57554167 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 114 |
| Conread position: | 193-305 |
| Cow position: | chr3:14456329-14456218 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 193-305 |
| Cow position: | chr3:17709913-17710025 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-305 |
| Cow position: | chr3:25011873-25011985 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-298 |
| Cow position: | chr4:10397401-10397681 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 89 |
| Conread position: | 11-305 |
| Cow position: | chr4:26745844-26746135 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 54 |
| Conread position: | 11-305 |
| Cow position: | chr4:40218176-40218477 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 93 |
| Conread position: | 12-305 |
| Cow position: | chr4:19096700-19096996 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 12-305 |
| Cow position: | chr4:61450162-61450469 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 85 |
| Conread position: | 12-305 |
| Cow position: | chr4:68387209-68387496 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 88 |
| Conread position: | 13-296 |
| Cow position: | chr4:9445283-9444997 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 144, 87 |
| Conread position: | 13-302 |
| Cow position: | chr4:41999773-41999485 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 32 |
| Conread position: | 65-305 |
| Cow position: | chr4:9849-9613 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 165, 35 |
| Conread position: | 193-305 |
| Cow position: | chr4:18602668-18602556 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-305 |
| Cow position: | chr5:11638952-11639254 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 89 |
| Conread position: | 11-305 |
| Cow position: | chr5:18404632-18404345 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 89 |
| Conread position: | 17-297 |
| Cow position: | chr5:1344447-1344157 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 177, 72 |
| Conread position: | 22-305 |
| Cow position: | chr5:39936551-39936837 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 55-305 |
| Cow position: | chr5:5785955-5785705 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 61-298 |
| Cow position: | chr5:14703775-14703553 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 97-304 |
| Cow position: | chr5:46697060-46697276 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 155 |
| Conread position: | 114-298 |
| Cow position: | chr5:70127732-70127920 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 193-305 |
| Cow position: | chr5:65312595-65312706 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-298 |
| Cow position: | chr6:7112137-7111848 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 86 |
| Conread position: | 11-298 |
| Cow position: | chr6:34843114-34842818 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 106, 89 |
| Conread position: | 11-298 |
| Cow position: | chr6:37217216-37217509 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 11-304 |
| Cow position: | chr6:15923782-15923478 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 11-305 |
| Cow position: | chr6:24125829-24125535 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 176, 89 |
| Conread position: | 53-305 |
| Cow position: | chr6:15938375-15938116 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 129, 47 |
| Conread position: | 75-305 |
| Cow position: | chr6:66532286-66532054 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 8-305 |
| Cow position: | chr7:28089703-28089991 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-298 |
| Cow position: | chr7:35920636-35920927 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 51 |
| Conread position: | 11-298 |
| Cow position: | chr7:64372403-64372110 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 89 |
| Conread position: | 11-305 |
| Cow position: | chr7:64199147-64198856 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 191, 89 |
| Conread position: | 27-298 |
| Cow position: | chr7:49735458-49735740 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 127-298 |
| Cow position: | chr7:27329568-27329739 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 188-304 |
| Cow position: | chr7:58966908-58967024 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 193-305 |
| Cow position: | chr7:40709747-40709859 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-298 |
| Cow position: | chr8:14628982-14628700 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 89 |
| Conread position: | 11-298 |
| Cow position: | chr8:42748898-42749194 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 154 |
| Conread position: | 17-298 |
| Cow position: | chr8:43903210-43903479 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 54-298 |
| Cow position: | chr8:10802706-10802453 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 67-305 |
| Cow position: | chr8:16052448-16052671 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 227, 33 |
| Conread position: | 11-305 |
| Cow position: | chr9:55032008-55032302 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 89 |
| Conread position: | 14-284 |
| Cow position: | chr9:10004375-10004096 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 180, 86 |
| Conread position: | 188-305 |
| Cow position: | chr9:1464134-1464019 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 11-298 |
| Cow position: | chrX:37080105-37079811 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 89 |
| Conread position: | 11-298 |
| Cow position: | chrX:39556381-39556088 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 86 |
| Conread position: | 13-302 |
| Cow position: | chrX:18990367-18990068 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 38-305 |
| Cow position: | chrX:34502387-34502658 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 54-305 |
| Cow position: | chrX:14924494-14924735 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 20 |
| Conread position: | 56-302 |
| Cow position: | chrX:31373058-31373310 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 44 |
| Conread position: | 58-302 |
| Cow position: | chrX:25848411-25848647 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 104-305 |
| Cow position: | chrX:41198628-41198821 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 193-305 |
| Cow position: | chrX:24788093-24787981 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |