Cow genome map
| Conread name: | rpgl02_c14.y1 |
| Conread position: | 139-304 |
| Cow position: | chr1:90621282-90621464 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 166-300 |
| Cow position: | chr11:30830453-30830591 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 167-303 |
| Cow position: | chr12:18582852-18582994 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 179-300 |
| Cow position: | chr13:37405532-37405656 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-300 |
| Cow position: | chr13:52249225-52249103 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 180-305 |
| Cow position: | chr13:23399585-23399716 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 166-300 |
| Cow position: | chr14:13845850-13845987 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 166-300 |
| Cow position: | chr15:47844185-47844044 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 201-300 |
| Cow position: | chr16:19402622-19402721 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-300 |
| Cow position: | chr18:49038631-49038469 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 159-300 |
| Cow position: | chr18:47096583-47096436 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 179-300 |
| Cow position: | chr19:18054102-18054227 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-303 |
| Cow position: | chr19:22414110-22414241 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 180-305 |
| Cow position: | chr19:43413935-43413806 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 396-525 |
| Cow position: | chr19:40503989-40504118 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-298 |
| Cow position: | chr2:69350344-69350522 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 157-300 |
| Cow position: | chr2:9476240-9476393 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 147-295 |
| Cow position: | chr21:28030550-28030397 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 166-304 |
| Cow position: | chr22:8357761-8357619 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 166-305 |
| Cow position: | chr22:1384256-1384113 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 166-300 |
| Cow position: | chr23:2281999-2282139 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 166-303 |
| Cow position: | chr23:17597611-17597465 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 166-305 |
| Cow position: | chr23:1981484-1981624 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 179-316 |
| Cow position: | chr23:15056405-15056544 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 130-300 |
| Cow position: | chr24:17073068-17073242 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 126-300 |
| Cow position: | chr26:7524971-7525149 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 149-300 |
| Cow position: | chr26:13802328-13802168 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 142-305 |
| Cow position: | chr27:299630-299458 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 131-303 |
| Cow position: | chr28:24646809-24646632 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 144-313 |
| Cow position: | chr29:17110165-17109981 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 166-295 |
| Cow position: | chr29:32963708-32963580 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 162-306 |
| Cow position: | chr3:4549183-4549036 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 166-305 |
| Cow position: | chr3:74234343-74234197 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 166-321 |
| Cow position: | chr3:52845717-52845547 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 145-300 |
| Cow position: | chr4:60141334-60141489 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 164-301 |
| Cow position: | chr4:59001958-59002108 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 179-300 |
| Cow position: | chr4:68590929-68590804 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 123-321 |
| Cow position: | chr5:40109738-40109539 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 166-300 |
| Cow position: | chr5:38833327-38833187 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 123-300 |
| Cow position: | chr7:10414866-10415052 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 166-304 |
| Cow position: | chr8:6224245-6224391 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 179-316 |
| Cow position: | chr9:36627983-36628122 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 160-321 |
| Cow position: | chrX:34836851-34837017 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 162-300 |
| Cow position: | chrX:24633905-24633762 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 166-316 |
| Cow position: | chrX:20583875-20583718 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 179-304 |
| Cow position: | chrX:11529535-11529405 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-304 |
| Cow position: | chrX:14275551-14275681 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-311 |
| Cow position: | chrX:23497500-23497637 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 0 |