Non-Coding RNA Search

Cow genome map


           Conread name:
           rpgl19_p16.y1
        

               Conread position:
               1-262
               

               Cow position:
               chr1:21998833-21999092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr1:56193044-56193318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr1:74285666-74285940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-264
               

               Cow position:
               chr1:63502950-63502688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               8-253
               

               Cow position:
               chr1:55320958-55321202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               8-262
               

               Cow position:
               chr1:68606421-68606680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               8-264
               

               Cow position:
               chr1:22843760-22843501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               79, 39
               

               Conread position:
               8-272
               

               Cow position:
               chr1:49973066-49973338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               8-274
               

               Cow position:
               chr1:24652397-24652134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 182
               

               Conread position:
               11-164
               

               Cow position:
               chr1:84226923-84226769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               11-244
               

               Cow position:
               chr1:31417382-31417629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               12-179
               

               Cow position:
               chr1:32566807-32566974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-222
               

               Cow position:
               chr1:3934143-3934356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr1:76620563-76620824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr1:26517772-26518036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr1:33552042-33551776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr1:62243526-62243790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 189
               

               Conread position:
               12-272
               

               Cow position:
               chr1:69404121-69403856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr1:69921319-69921585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr1:82923067-82923337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 231
               

               Conread position:
               12-272
               

               Cow position:
               chr1:99914541-99914273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr1:102433926-102434188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               13-264
               

               Cow position:
               chr1:8826160-8825907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               14-264
               

               Cow position:
               chr1:56164673-56164408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               16-263
               

               Cow position:
               chr1:6195355-6195095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               16-272
               

               Cow position:
               chr1:72185771-72186032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               18-270
               

               Cow position:
               chr1:1460082-1460345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               19-178
               

               Cow position:
               chr1:33713177-33713021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               28-272
               

               Cow position:
               chr1:79111588-79111341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               32-264
               

               Cow position:
               chr1:81863404-81863644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               41-261
               

               Cow position:
               chr1:88131862-88131636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               50-264
               

               Cow position:
               chr1:58336917-58336697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               56-263
               

               Cow position:
               chr1:77115629-77115842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr10:41568248-41567986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               1-264
               

               Cow position:
               chr10:47908083-47907813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr10:14334702-14334976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr10:22102393-22102110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               3-273
               

               Cow position:
               chr10:11821902-11821620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               4-264
               

               Cow position:
               chr10:41878067-41877799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               8-214
               

               Cow position:
               chr10:64146070-64145866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               11-272
               

               Cow position:
               chr10:7280947-7281215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               12-254
               

               Cow position:
               chr10:19512728-19512486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               12-263
               

               Cow position:
               chr10:58597506-58597268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               12-272
               

               Cow position:
               chr10:8291123-8290851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr10:29845509-29845775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr10:38537361-38537624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               36-272
               

               Cow position:
               chr10:26597735-26597487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               39-272
               

               Cow position:
               chr10:21488032-21487794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               42-273
               

               Cow position:
               chr10:29110036-29110269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               89-273
               

               Cow position:
               chr10:29631707-29631899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-254
               

               Cow position:
               chr11:28053830-28054079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               1-264
               

               Cow position:
               chr11:44156463-44156727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr11:26124143-26124416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr11:44252581-44252310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               4-208
               

               Cow position:
               chr11:72310249-72310455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               4-264
               

               Cow position:
               chr11:1495302-1495568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               4-264
               

               Cow position:
               chr11:9601529-9601812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               8-264
               

               Cow position:
               chr11:12094346-12094088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               11-264
               

               Cow position:
               chr11:7110331-7110584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               12-272
               

               Cow position:
               chr11:24394089-24393826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr11:44582559-44582825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               14-272
               

               Cow position:
               chr11:71981741-71982017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               15-214
               

               Cow position:
               chr11:49409490-49409299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               19-272
               

               Cow position:
               chr11:26564318-26564569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               46-273
               

               Cow position:
               chr11:26070324-26070549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               54-273
               

               Cow position:
               chr11:77253994-77254218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               65-273
               

               Cow position:
               chr11:31874062-31874269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               2-212
               

               Cow position:
               chr12:17979803-17979597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               4-272
               

               Cow position:
               chr12:27931832-27932107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               10-172
               

               Cow position:
               chr12:32677872-32678033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               12-252
               

               Cow position:
               chr12:27854901-27855145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               12-264
               

               Cow position:
               chr12:600297-600548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               194, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr12:22204679-22204945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               14-262
               

               Cow position:
               chr12:35313616-35313863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               198, 45
               

               Conread position:
               1-272
               

               Cow position:
               chr13:13900720-13900447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr13:31611455-31611728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               4-272
               

               Cow position:
               chr13:4484648-4484376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               5-273
               

               Cow position:
               chr13:34324703-34324982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               12-241
               

               Cow position:
               chr13:4942228-4942001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               12-291
               

               Cow position:
               chr13:35758127-35757831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               14-239
               

               Cow position:
               chr13:34938305-34938078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               18-264
               

               Cow position:
               chr13:11797881-11798122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               198, 45
               

               Conread position:
               54-258
               

               Cow position:
               chr13:5625199-5625411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               55-262
               

               Cow position:
               chr13:57024501-57024289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               89-264
               

               Cow position:
               chr13:30239003-30238827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               123, 81
               

               Conread position:
               144-272
               

               Cow position:
               chr13:48358419-48358286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr14:37224918-37224654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr14:5529800-5529521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr14:16272565-16272843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr14:22030718-22030987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               3-272
               

               Cow position:
               chr14:37455336-37455606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               4-264
               

               Cow position:
               chr14:190695-190430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               4-264
               

               Cow position:
               chr14:46391803-46392069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               4-269
               

               Cow position:
               chr14:50111523-50111251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 270
               

               Conread position:
               8-264
               

               Cow position:
               chr14:29775491-29775754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               8-272
               

               Cow position:
               chr14:16918995-16919261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 28
               

               Conread position:
               8-272
               

               Cow position:
               chr14:40341776-40341504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               8-273
               

               Cow position:
               chr14:44131608-44131348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               86, 54
               

               Conread position:
               10-264
               

               Cow position:
               chr14:40168998-40169250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               11-195
               

               Cow position:
               chr14:44582081-44581887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               12-254
               

               Cow position:
               chr14:7473082-7472830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr14:5512543-5512287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr14:15275514-15275775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr14:17686118-17685852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               14-264
               

               Cow position:
               chr14:27978077-27977824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               15-264
               

               Cow position:
               chr14:45028275-45028539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               15-273
               

               Cow position:
               chr14:35385356-35385618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               76, 61
               

               Conread position:
               17-272
               

               Cow position:
               chr14:32447506-32447249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               18-272
               

               Cow position:
               chr14:12611163-12610905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               40-272
               

               Cow position:
               chr14:44689748-44689508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               56-272
               

               Cow position:
               chr14:44552556-44552339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 149
               

               Conread position:
               56-273
               

               Cow position:
               chr14:13462258-13462040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               209, 49
               

               Conread position:
               89-263
               

               Cow position:
               chr14:50393415-50393590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               96, 119
               

               Conread position:
               1-274
               

               Cow position:
               chr15:32204338-32204071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               211, 14
               

               Conread position:
               8-156
               

               Cow position:
               chr15:7892805-7892955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               8-181
               

               Cow position:
               chr15:499479-499306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               8-264
               

               Cow position:
               chr15:6079478-6079219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               11-245
               

               Cow position:
               chr15:36668470-36668230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               11-264
               

               Cow position:
               chr15:35646947-35647202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               12-210
               

               Cow position:
               chr15:2013067-2012860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr15:4386481-4386225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               12-272
               

               Cow position:
               chr15:2077379-2077113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr15:7837983-7837705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr15:31359601-31359338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               16-258
               

               Cow position:
               chr15:9003406-9003649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               18-272
               

               Cow position:
               chr15:21665028-21665290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               19-273
               

               Cow position:
               chr15:5981060-5980802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               32-272
               

               Cow position:
               chr15:2901773-2902017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               40-273
               

               Cow position:
               chr15:51675415-51675171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               42-270
               

               Cow position:
               chr15:3889571-3889336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               50-264
               

               Cow position:
               chr15:21450354-21450128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               38, 119
               

               Conread position:
               52-264
               

               Cow position:
               chr15:44829484-44829266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               81-273
               

               Cow position:
               chr15:51715580-51715382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               89-264
               

               Cow position:
               chr15:21948604-21948782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr16:1567067-1567340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr16:2410579-2410854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr16:37455634-37455900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               3-216
               

               Cow position:
               chr16:41570673-41570452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 89
               

               Conread position:
               3-267
               

               Cow position:
               chr16:10565372-10565638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               8-156
               

               Cow position:
               chr16:49234250-49234398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               8-264
               

               Cow position:
               chr16:1860600-1860344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               208, 39
               

               Conread position:
               9-262
               

               Cow position:
               chr16:34530704-34530437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-226
               

               Cow position:
               chr16:51405575-51405791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               12-263
               

               Cow position:
               chr16:4478593-4478860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr16:1432568-1432309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               12-264
               

               Cow position:
               chr16:26664130-26663872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr16:8815727-8815994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               12-272
               

               Cow position:
               chr16:12537549-12537812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr16:25342347-25342081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               12-272
               

               Cow position:
               chr16:25442008-25441739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr16:29047400-29047135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               12-272
               

               Cow position:
               chr16:40295797-40296064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               16-264
               

               Cow position:
               chr16:28169986-28170249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               18-272
               

               Cow position:
               chr16:27733427-27733679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               19-198
               

               Cow position:
               chr16:837690-837503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               19-272
               

               Cow position:
               chr16:2726918-2727176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               32-273
               

               Cow position:
               chr16:29034409-29034162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               37-264
               

               Cow position:
               chr16:42736048-42736270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 169
               

               Conread position:
               54-264
               

               Cow position:
               chr16:45798898-45798685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               54-273
               

               Cow position:
               chr16:25258290-25258057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               4-264
               

               Cow position:
               chr17:24783118-24782852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               8-234
               

               Cow position:
               chr17:239303-239067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               8-264
               

               Cow position:
               chr17:150942-151204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               8-272
               

               Cow position:
               chr17:20488893-20488625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               8-273
               

               Cow position:
               chr17:20080920-20081183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               12-272
               

               Cow position:
               chr17:6260809-6260541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr17:40805759-40805493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-273
               

               Cow position:
               chr17:2580571-2580305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 207
               

               Conread position:
               14-273
               

               Cow position:
               chr17:20099524-20099794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               15-154
               

               Cow position:
               chr17:16121595-16121735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               27-264
               

               Cow position:
               chr17:251095-250856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               30-273
               

               Cow position:
               chr17:20086824-20087067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 91
               

               Conread position:
               36-272
               

               Cow position:
               chr17:54530-54770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               36-273
               

               Cow position:
               chr17:20403345-20403107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               101-264
               

               Cow position:
               chr17:11025657-11025820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               135
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr18:37507116-37506864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               12-272
               

               Cow position:
               chr18:14131552-14131286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr18:32653377-32653110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               16-264
               

               Cow position:
               chr18:27988356-27988094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               16-272
               

               Cow position:
               chr18:23798804-23798542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               18-264
               

               Cow position:
               chr18:54022979-54023231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               55-271
               

               Cow position:
               chr18:33269939-33269719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 194
               

               Conread position:
               1-272
               

               Cow position:
               chr19:438267-438541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-273
               

               Cow position:
               chr19:1588044-1588317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               8-254
               

               Cow position:
               chr19:205150-204898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               81, 227
               

               Conread position:
               8-263
               

               Cow position:
               chr19:3139098-3138839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               12-264
               

               Cow position:
               chr19:33942773-33942512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr19:2273222-2273485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr19:7489513-7489242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr19:28580500-28580761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               19-273
               

               Cow position:
               chr19:28405548-28405811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               54-272
               

               Cow position:
               chr19:4386744-4386521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr2:81257784-81257522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               1-272
               

               Cow position:
               chr2:16900871-16900591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr2:19011965-19011684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               2-273
               

               Cow position:
               chr2:5484385-5484653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               4-264
               

               Cow position:
               chr2:39422235-39421971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               4-272
               

               Cow position:
               chr2:28648985-28649259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               8-264
               

               Cow position:
               chr2:1691585-1691325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               8-272
               

               Cow position:
               chr2:47811456-47811184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               8-273
               

               Cow position:
               chr2:51617864-51617586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               9-273
               

               Cow position:
               chr2:16291062-16290800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 154
               

               Conread position:
               11-260
               

               Cow position:
               chr2:78743196-78742947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               12-240
               

               Cow position:
               chr2:13045109-13045341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr2:8119146-8118880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr2:42670101-42670367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               14-249
               

               Cow position:
               chr2:55483543-55483776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               14-264
               

               Cow position:
               chr2:4926815-4927055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               16-272
               

               Cow position:
               chr2:80292360-80292614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               20-280
               

               Cow position:
               chr2:73193698-73193441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               191, 39
               

               Conread position:
               28-264
               

               Cow position:
               chr2:49605531-49605291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               53-273
               

               Cow position:
               chr2:41151168-41150956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               54-253
               

               Cow position:
               chr2:36029806-36030009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               54-273
               

               Cow position:
               chr2:53554519-53554302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               152, 107
               

               Conread position:
               1-272
               

               Cow position:
               chr20:12437578-12437850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               4-264
               

               Cow position:
               chr20:8973686-8973952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               7-236
               

               Cow position:
               chr20:13678922-13679153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 124
               

               Conread position:
               8-264
               

               Cow position:
               chr20:8216641-8216381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               8-264
               

               Cow position:
               chr20:10101569-10101836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               8-264
               

               Cow position:
               chr20:18314220-18314482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 165
               

               Conread position:
               8-272
               

               Cow position:
               chr20:24615739-24616011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-254
               

               Cow position:
               chr20:15096759-15097004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               12-272
               

               Cow position:
               chr20:13764027-13763764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr20:15293124-15292859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr20:17660956-17661217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               12-272
               

               Cow position:
               chr20:23468540-23468806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               16-272
               

               Cow position:
               chr20:12569640-12569377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               41-272
               

               Cow position:
               chr20:28564495-28564733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               63-273
               

               Cow position:
               chr20:37442236-37442441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               4-272
               

               Cow position:
               chr21:1192999-1192731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               4-272
               

               Cow position:
               chr21:5840019-5840293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               8-273
               

               Cow position:
               chr21:30318-30051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               8-273
               

               Cow position:
               chr21:9893136-9892861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               9-273
               

               Cow position:
               chr21:25782876-25782610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               12-272
               

               Cow position:
               chr21:147167-146900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               12-272
               

               Cow position:
               chr21:27069726-27069996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               13-264
               

               Cow position:
               chr21:6625008-6624753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               13-272
               

               Cow position:
               chr21:31515082-31515357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               14-273
               

               Cow position:
               chr21:18817313-18817584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               19-273
               

               Cow position:
               chr21:4185133-4184874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               32-258
               

               Cow position:
               chr21:360862-360630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               54-264
               

               Cow position:
               chr21:37718822-37719039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               136-264
               

               Cow position:
               chr21:5015196-5015328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr22:3803263-3802997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               1-264
               

               Cow position:
               chr22:39468446-39468712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr22:34169411-34169137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               4-272
               

               Cow position:
               chr22:31314419-31314145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               4-277
               

               Cow position:
               chr22:44350588-44350867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               8-262
               

               Cow position:
               chr22:8737262-8737519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               8-273
               

               Cow position:
               chr22:1281658-1281933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 133
               

               Conread position:
               10-282
               

               Cow position:
               chr22:37133722-37133446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               11-216
               

               Cow position:
               chr22:36579518-36579725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 164
               

               Conread position:
               11-264
               

               Cow position:
               chr22:1323272-1323021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               11-269
               

               Cow position:
               chr22:37140964-37140705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               12-264
               

               Cow position:
               chr22:18815301-18815572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr22:42992238-42991988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               12-271
               

               Cow position:
               chr22:37292600-37292858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               12-272
               

               Cow position:
               chr22:1519956-1520221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 222
               

               Conread position:
               12-272
               

               Cow position:
               chr22:44397519-44397244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               14-264
               

               Cow position:
               chr22:538168-537909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 223
               

               Conread position:
               18-264
               

               Cow position:
               chr22:6502080-6502330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 143
               

               Conread position:
               19-150
               

               Cow position:
               chr22:40370509-40370376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               19-273
               

               Cow position:
               chr22:44458117-44457852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               1-264
               

               Cow position:
               chr23:15218826-15219094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               1-272
               

               Cow position:
               chr23:14963974-14964245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-236
               

               Cow position:
               chr23:38581797-38581566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               4-264
               

               Cow position:
               chr23:3707196-3706929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               7-273
               

               Cow position:
               chr23:5873509-5873781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               8-272
               

               Cow position:
               chr23:2717457-2717192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               8-273
               

               Cow position:
               chr23:25682875-25683138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               11-198
               

               Cow position:
               chr23:2440791-2440978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               12-272
               

               Cow position:
               chr23:4818085-4817820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               16-264
               

               Cow position:
               chr23:2780909-2781160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               16-276
               

               Cow position:
               chr23:19490602-19490333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 193
               

               Conread position:
               18-264
               

               Cow position:
               chr23:2576485-2576234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               85, 181
               

               Conread position:
               19-272
               

               Cow position:
               chr23:36030319-36030576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               24-263
               

               Cow position:
               chr23:1401485-1401717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               32-273
               

               Cow position:
               chr23:4511101-4510865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               41-264
               

               Cow position:
               chr23:27400545-27400316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               104-262
               

               Cow position:
               chr23:14973593-14973759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr24:6407194-6406924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-264
               

               Cow position:
               chr24:19834553-19834286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               4-264
               

               Cow position:
               chr24:6659339-6659597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               8-214
               

               Cow position:
               chr24:36709526-36709312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-273
               

               Cow position:
               chr24:6332538-6332811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               8-273
               

               Cow position:
               chr24:6337542-6337269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               142, 39
               

               Conread position:
               8-273
               

               Cow position:
               chr24:36558619-36558889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               11-217
               

               Cow position:
               chr24:6049703-6049490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 136
               

               Conread position:
               11-262
               

               Cow position:
               chr24:12205155-12205411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr24:12087356-12087101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 190
               

               Conread position:
               12-264
               

               Cow position:
               chr24:17695832-17696088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr24:4414381-4414647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               12-272
               

               Cow position:
               chr24:9545213-9544949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               15-264
               

               Cow position:
               chr24:12109557-12109813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               19-212
               

               Cow position:
               chr24:29353028-29353229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               28-197
               

               Cow position:
               chr24:17370833-17370996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               57-267
               

               Cow position:
               chr24:40656159-40655942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               65-273
               

               Cow position:
               chr24:29183250-29183034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr25:12941562-12941824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               12-272
               

               Cow position:
               chr25:25507813-25507549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               1-264
               

               Cow position:
               chr26:19350384-19350640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               208, 13
               

               Conread position:
               3-272
               

               Cow position:
               chr26:6848308-6848580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               3-272
               

               Cow position:
               chr26:9561639-9561917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               10-273
               

               Cow position:
               chr26:21825551-21825823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               11-175
               

               Cow position:
               chr26:6805958-6806121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               12-145
               

               Cow position:
               chr26:17325201-17325065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr26:17395783-17396049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               1-264
               

               Cow position:
               chr27:28079507-28079252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr27:23336246-23335961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               50, 125
               

               Conread position:
               7-264
               

               Cow position:
               chr27:9330805-9330538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               12-166
               

               Cow position:
               chr27:27664066-27663909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr27:9992134-9992387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               54-272
               

               Cow position:
               chr27:5911894-5911668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               56-248
               

               Cow position:
               chr27:26554649-26554839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               38, 144
               

               Conread position:
               1-272
               

               Cow position:
               chr28:5938606-5938330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               1-272
               

               Cow position:
               chr28:26425136-26425410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-264
               

               Cow position:
               chr28:1386279-1386536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               3-264
               

               Cow position:
               chr28:15684362-15684093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               3-273
               

               Cow position:
               chr28:10072390-10072119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               4-272
               

               Cow position:
               chr28:5113177-5113451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 48
               

               Conread position:
               4-272
               

               Cow position:
               chr28:12151427-12151151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 157
               

               Conread position:
               8-264
               

               Cow position:
               chr28:10460491-10460748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               8-272
               

               Cow position:
               chr28:8719830-8720101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               8-273
               

               Cow position:
               chr28:21360611-21360329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               11-251
               

               Cow position:
               chr28:29760817-29761062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               12-272
               

               Cow position:
               chr28:3191144-3191410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr28:7003107-7002841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr28:7741558-7741296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr28:13461092-13460819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               14-264
               

               Cow position:
               chr28:3019593-3019862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               15-264
               

               Cow position:
               chr28:10646302-10646544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               28-272
               

               Cow position:
               chr28:1166783-1167031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               56-272
               

               Cow position:
               chr28:5814443-5814221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               68-272
               

               Cow position:
               chr28:783727-783518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               8-264
               

               Cow position:
               chr29:9642677-9642941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               8-264
               

               Cow position:
               chr29:14085046-14085305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               9-258
               

               Cow position:
               chr29:38237443-38237698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr29:2100927-2100669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               12-264
               

               Cow position:
               chr29:20252243-20251985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr29:6265191-6265464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr29:7430142-7430408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr29:14586999-14586731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr29:32541171-32540905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr29:38228054-38227789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr29:43323636-43323370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               14-258
               

               Cow position:
               chr29:15967788-15968035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               14-273
               

               Cow position:
               chr29:2949284-2949534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               16-272
               

               Cow position:
               chr29:34798737-34798994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               16-272
               

               Cow position:
               chr29:39078633-39078895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               17-234
               

               Cow position:
               chr29:35263754-35263530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               30-226
               

               Cow position:
               chr29:13651114-13650916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               43-216
               

               Cow position:
               chr29:14448946-14448776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               58-248
               

               Cow position:
               chr29:34585402-34585211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               5, 133
               

               Conread position:
               1-264
               

               Cow position:
               chr3:24445078-24445343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               3-264
               

               Cow position:
               chr3:77424630-77424370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               4-264
               

               Cow position:
               chr3:32622031-32622307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               8-212
               

               Cow position:
               chr3:37625991-37625788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               8-272
               

               Cow position:
               chr3:5953188-5953455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               8-272
               

               Cow position:
               chr3:63002547-63002818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               8-273
               

               Cow position:
               chr3:29579622-29579351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               11-215
               

               Cow position:
               chr3:15181354-15181153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               12-262
               

               Cow position:
               chr3:10240650-10240394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr3:40824380-40824127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-264
               

               Cow position:
               chr3:48058366-48058619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               12-272
               

               Cow position:
               chr3:18541150-18541415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr3:18812491-18812234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               253, 53
               

               Conread position:
               12-272
               

               Cow position:
               chr3:21181709-21181975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr3:48229484-48229747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               12-272
               

               Cow position:
               chr3:59862368-59862098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               14-264
               

               Cow position:
               chr3:19939878-19939628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               16-264
               

               Cow position:
               chr3:3840818-3841075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               42-264
               

               Cow position:
               chr3:2906808-2907035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 37
               

               Conread position:
               51-255
               

               Cow position:
               chr3:24588812-24589022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               89-264
               

               Cow position:
               chr3:18462656-18462834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr4:16639417-16639153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-264
               

               Cow position:
               chr4:43881911-43881648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               1-265
               

               Cow position:
               chr4:17925158-17925420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr4:25598693-25598963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 15
               

               Conread position:
               1-272
               

               Cow position:
               chr4:43318836-43319110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-258
               

               Cow position:
               chr4:14776259-14775990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               3-280
               

               Cow position:
               chr4:47254127-47254407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               4-264
               

               Cow position:
               chr4:5444027-5444294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               4-272
               

               Cow position:
               chr4:6489558-6489831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               4-272
               

               Cow position:
               chr4:18517705-18517431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               8-214
               

               Cow position:
               chr4:51042488-51042696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               11-264
               

               Cow position:
               chr4:46665323-46665060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               11-273
               

               Cow position:
               chr4:45298284-45298554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr4:356707-356442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr4:12588127-12587865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               200, 47
               

               Conread position:
               12-272
               

               Cow position:
               chr4:13494126-13493851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr4:36897172-36896905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               14-264
               

               Cow position:
               chr4:49716470-49716218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               16-264
               

               Cow position:
               chr4:159954-159700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               37-273
               

               Cow position:
               chr4:28832334-28832091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               29, 132
               

               Conread position:
               43-273
               

               Cow position:
               chr4:11110495-11110733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               47-273
               

               Cow position:
               chr4:34183774-34184009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               1-254
               

               Cow position:
               chr5:54791731-54791984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               1-254
               

               Cow position:
               chr5:57481637-57481891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr5:3786829-3786547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr5:55628893-55628619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr5:64781114-64781387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               3-271
               

               Cow position:
               chr5:18400788-18401058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 39
               

               Conread position:
               4-264
               

               Cow position:
               chr5:46004953-46005215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               4-268
               

               Cow position:
               chr5:10919724-10919460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               8-264
               

               Cow position:
               chr5:27055778-27056042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               8-264
               

               Cow position:
               chr5:39245915-39246174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               8-273
               

               Cow position:
               chr5:41960836-41961097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               8-273
               

               Cow position:
               chr5:45701213-45700941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 177
               

               Conread position:
               9-264
               

               Cow position:
               chr5:10775372-10775631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               11-264
               

               Cow position:
               chr5:23669233-23669482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               11-264
               

               Cow position:
               chr5:41527891-41528136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 67
               

               Conread position:
               11-264
               

               Cow position:
               chr5:49757776-49758027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               11-264
               

               Cow position:
               chr5:51770054-51770306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               195, 170
               

               Conread position:
               12-264
               

               Cow position:
               chr5:1341139-1341394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-264
               

               Cow position:
               chr5:4070102-4069858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               204, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr5:30580232-30579957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               15-264
               

               Cow position:
               chr5:32947950-32947694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               36-272
               

               Cow position:
               chr5:3503252-3503490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               59-274
               

               Cow position:
               chr5:49591251-49591473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               42, 138
               

               Conread position:
               88-272
               

               Cow position:
               chr5:29766700-29766512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               123, 39
               

               Conread position:
               112-272
               

               Cow position:
               chr5:7274621-7274459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               1-214
               

               Cow position:
               chr6:3888460-3888664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               1-264
               

               Cow position:
               chr6:44149511-44149778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               1-272
               

               Cow position:
               chr6:30273853-30274123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr6:34891082-34891356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr6:40866282-40866549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-273
               

               Cow position:
               chr6:6474822-6475100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               4-264
               

               Cow position:
               chr6:13105103-13104836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               4-264
               

               Cow position:
               chr6:13944952-13944686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 193
               

               Conread position:
               4-272
               

               Cow position:
               chr6:25215259-25214990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               8-234
               

               Cow position:
               chr6:7178249-7178486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-250
               

               Cow position:
               chr6:18973368-18973616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               8-262
               

               Cow position:
               chr6:38271927-38271670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               8-264
               

               Cow position:
               chr6:13316421-13316695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               12-262
               

               Cow position:
               chr6:27528962-27529224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr6:3276338-3276596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               12-264
               

               Cow position:
               chr6:41190352-41190100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               12-264
               

               Cow position:
               chr6:58027708-58027454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               12-264
               

               Cow position:
               chr6:65882246-65881990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               12-272
               

               Cow position:
               chr6:35875678-35875948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr6:65842660-65842393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               14-268
               

               Cow position:
               chr6:10644773-10644521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 37
               

               Conread position:
               16-151
               

               Cow position:
               chr6:29312531-29312396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               16-272
               

               Cow position:
               chr6:8203215-8202951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               16-272
               

               Cow position:
               chr6:24240083-24239826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               18-179
               

               Cow position:
               chr6:1535547-1535711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               19-264
               

               Cow position:
               chr6:28133959-28133709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               41-264
               

               Cow position:
               chr6:1821618-1821848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               49, 155
               

               Conread position:
               42-272
               

               Cow position:
               chr6:21973660-21973425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               50-197
               

               Cow position:
               chr6:11273915-11274065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               56-264
               

               Cow position:
               chr6:40316381-40316159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr7:39792903-39792639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               4-264
               

               Cow position:
               chr7:545980-545712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               8-262
               

               Cow position:
               chr7:51015390-51015136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               208, 58
               

               Conread position:
               8-264
               

               Cow position:
               chr7:29368894-29369151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               8-264
               

               Cow position:
               chr7:67429702-67429440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               8-264
               

               Cow position:
               chr7:67676227-67675967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               8-273
               

               Cow position:
               chr7:19990156-19989886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               8-273
               

               Cow position:
               chr7:33332688-33332424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               10-273
               

               Cow position:
               chr7:42871270-42871001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               10-285
               

               Cow position:
               chr7:59679979-59679694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               11-249
               

               Cow position:
               chr7:68334069-68333830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               11-264
               

               Cow position:
               chr7:24807329-24807586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               12-225
               

               Cow position:
               chr7:66905847-66905631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               82, 189
               

               Conread position:
               12-264
               

               Cow position:
               chr7:13532777-13533031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr7:10430298-10430564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               12-272
               

               Cow position:
               chr7:14138470-14138737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr7:27787754-27787494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               12-272
               

               Cow position:
               chr7:38397940-38397674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               12-272
               

               Cow position:
               chr7:46900957-46901214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               12-273
               

               Cow position:
               chr7:526101-525834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               13-272
               

               Cow position:
               chr7:1371520-1371786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               14-264
               

               Cow position:
               chr7:54670947-54671212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               14-269
               

               Cow position:
               chr7:63386857-63386592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 263
               

               Conread position:
               14-272
               

               Cow position:
               chr7:7210875-7211137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               15-272
               

               Cow position:
               chr7:33405120-33405381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               16-272
               

               Cow position:
               chr7:61578584-61578314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               52-227
               

               Cow position:
               chr7:27606246-27606422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               159, 49
               

               Conread position:
               1-254
               

               Cow position:
               chr8:12450343-12450085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               1-264
               

               Cow position:
               chr8:44243263-44243524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr8:33589698-33589422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr8:42485236-42484963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr8:46051502-46051234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               1-273
               

               Cow position:
               chr8:28877778-28878054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               4-264
               

               Cow position:
               chr8:47068479-47068756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               4-273
               

               Cow position:
               chr8:42419106-42419391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 272
               

               Conread position:
               8-184
               

               Cow position:
               chr8:47674165-47673989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               8-195
               

               Cow position:
               chr8:25417539-25417728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               8-199
               

               Cow position:
               chr8:45450093-45449903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               8-264
               

               Cow position:
               chr8:45450622-45450361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               10-273
               

               Cow position:
               chr8:41644358-41644625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               11-214
               

               Cow position:
               chr8:48787740-48787538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               11-258
               

               Cow position:
               chr8:38585029-38585279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 32
               

               Conread position:
               12-264
               

               Cow position:
               chr8:29007949-29007699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-269
               

               Cow position:
               chr8:50929805-50930077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               5, 270
               

               Conread position:
               12-272
               

               Cow position:
               chr8:5017492-5017226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr8:50287604-50287878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 233
               

               Conread position:
               12-272
               

               Cow position:
               chr8:60061696-60061430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               16-255
               

               Cow position:
               chr8:32815579-32815823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               16-272
               

               Cow position:
               chr8:14590592-14590855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               32-214
               

               Cow position:
               chr8:25437609-25437428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               36-273
               

               Cow position:
               chr8:2170083-2170327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               55-213
               

               Cow position:
               chr8:47887159-47887000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               99-264
               

               Cow position:
               chr8:11969058-11969226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               99-272
               

               Cow position:
               chr8:49215666-49215488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1-254
               

               Cow position:
               chr9:60277044-60277297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               1-272
               

               Cow position:
               chr9:37161842-37162115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-215
               

               Cow position:
               chr9:30435544-30435330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               10-273
               

               Cow position:
               chr9:35315914-35316168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               11-264
               

               Cow position:
               chr9:43664758-43664510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               11-273
               

               Cow position:
               chr9:13474819-13475089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               12-177
               

               Cow position:
               chr9:27783150-27782982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-254
               

               Cow position:
               chr9:29627787-29628032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               12-262
               

               Cow position:
               chr9:10322766-10322514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-264
               

               Cow position:
               chr9:16176735-16176480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 228
               

               Conread position:
               12-272
               

               Cow position:
               chr9:2172017-2171745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               12-272
               

               Cow position:
               chr9:7061117-7061384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               82, 110
               

               Conread position:
               12-272
               

               Cow position:
               chr9:29027248-29027510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr9:37970232-37970498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chr9:51181214-51181487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               14-214
               

               Cow position:
               chr9:52292366-52292172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               47-272
               

               Cow position:
               chr9:34722838-34722604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-272
               

               Cow position:
               chrX:38148473-38148197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               1-273
               

               Cow position:
               chrX:26766323-26766607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               1-273
               

               Cow position:
               chrX:28650675-28650945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               3-268
               

               Cow position:
               chrX:13182247-13182507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               211, 39
               

               Conread position:
               4-214
               

               Cow position:
               chrX:16780185-16779975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               4-264
               

               Cow position:
               chrX:11148457-11148722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               4-268
               

               Cow position:
               chrX:29852686-29852954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               4-272
               

               Cow position:
               chrX:23455139-23455413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 47
               

               Conread position:
               4-274
               

               Cow position:
               chrX:31186336-31186622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               8-264
               

               Cow position:
               chrX:6281881-6282146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-274
               

               Cow position:
               chrX:21059657-21059384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               82, 174
               

               Conread position:
               11-273
               

               Cow position:
               chrX:6241734-6241988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 127
               

               Conread position:
               12-214
               

               Cow position:
               chrX:29097065-29096862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               12-272
               

               Cow position:
               chrX:16700187-16699909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 219
               

               Conread position:
               12-272
               

               Cow position:
               chrX:23040254-23040518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               12-272
               

               Cow position:
               chrX:26528845-26528582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               13-272
               

               Cow position:
               chrX:971651-971379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               16-239
               

               Cow position:
               chrX:39563068-39563296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               63, 112
               

               Conread position:
               18-191
               

               Cow position:
               chrX:29885852-29885676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               27-264
               

               Cow position:
               chrX:16015576-16015824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               36-264
               

               Cow position:
               chrX:23020177-23019943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               36-272
               

               Cow position:
               chrX:21589815-21589571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
Conread position:	1-262
Cow position:	chr1:21998833-21999092 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	199
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	95, 13
Conread position:	1-272
Cow position:	chr1:56193044-56193318 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	206
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	54, 13
Conread position:	3-264
Cow position:	chr1:63502950-63502688 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	183
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	120, 39
Conread position:	8-253
Cow position:	chr1:55320958-55321202 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	189
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	86, 58
Conread position:	8-262
Cow position:	chr1:68606421-68606680 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	199
Alignm E-value:	0
Alignm gaps (pig, cow):	81, 43
Conread position:	8-264
Cow position:	chr1:22843760-22843501 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	186
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	79, 39
Conread position:	8-272
Cow position:	chr1:49973066-49973338 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	208
Alignm E-value:	0
Alignm gaps (pig, cow):	86, 0
Conread position:	8-274
Cow position:	chr1:24652397-24652134 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	198
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	79, 182
Conread position:	11-164
Cow position:	chr1:84226923-84226769 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	118
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	79, 40
Conread position:	11-244
Cow position:	chr1:31417382-31417629 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	185
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	65, 50
Conread position:	12-179
Cow position:	chr1:32566807-32566974 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	132
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	82, 39
Conread position:	12-222
Cow position:	chr1:3934143-3934356 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	164
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	82, 0
Conread position:	12-264
Cow position:	chr1:76620563-76620824 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	197
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 0
Conread position:	12-272
Cow position:	chr1:26517772-26518036 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	199
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	82, 39
Conread position:	13-264
Cow position:	chr1:8826160-8825907 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	188
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	92, 45
Conread position:	14-264
Cow position:	chr1:56164673-56164408 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	190
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	40, 0
Conread position:	16-263
Cow position:	chr1:6195355-6195095 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	198
Alignm E-value:	0
Alignm gaps (pig, cow):	31, 0
Conread position:	16-272
Cow position:	chr1:72185771-72186032 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	199
Alignm E-value:	0
Alignm gaps (pig, cow):	78, 35
Conread position:	18-270
Cow position:	chr1:1460082-1460345 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	194
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	58, 32
Conread position:	19-178
Cow position:	chr1:33713177-33713021 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	119
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	41, 0