Cow genome map
| Conread name: | rpigcb_11866.y1 |
| Conread position: | 9-245 |
| Cow position: | chr1:35246666-35246439 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 9-311 |
| Cow position: | chr1:71017005-71017298 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 166, 82 |
| Conread position: | 9-317 |
| Cow position: | chr1:23578463-23578760 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 9-329 |
| Cow position: | chr1:54116589-54116280 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 9-329 |
| Cow position: | chr1:88266799-88267102 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 10-328 |
| Cow position: | chr1:81001019-81001322 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 13-213 |
| Cow position: | chr1:78073844-78074036 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 178, 88 |
| Conread position: | 13-319 |
| Cow position: | chr1:57694311-57694605 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 14-330 |
| Cow position: | chr1:81925843-81926151 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 15-283 |
| Cow position: | chr1:86021003-86021269 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 15-329 |
| Cow position: | chr1:21430972-21431271 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 16-209 |
| Cow position: | chr1:91449618-91449441 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 8-287 |
| Cow position: | chr10:19598268-19598531 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 8-317 |
| Cow position: | chr10:58600968-58600672 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 14-329 |
| Cow position: | chr10:31542003-31541705 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 20-240 |
| Cow position: | chr10:5641045-5641257 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 20-257 |
| Cow position: | chr10:14730595-14730821 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 27-310 |
| Cow position: | chr10:60363325-60363052 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 56-276 |
| Cow position: | chr10:22573575-22573782 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 186, 45 |
| Conread position: | 9-189 |
| Cow position: | chr11:12010085-12009915 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 9-294 |
| Cow position: | chr11:1285117-1285392 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 12-275 |
| Cow position: | chr11:8551814-8551557 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 13-280 |
| Cow position: | chr11:76960461-76960206 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 13-305 |
| Cow position: | chr11:35369405-35369123 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 13-318 |
| Cow position: | chr11:67741024-67741319 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 14-216 |
| Cow position: | chr11:27667049-27667229 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 14-274 |
| Cow position: | chr11:20494106-20494353 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 14-312 |
| Cow position: | chr11:45651912-45652201 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 18-308 |
| Cow position: | chr11:2812225-2811933 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 18-329 |
| Cow position: | chr11:31628513-31628220 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 57-293 |
| Cow position: | chr11:24108887-24108666 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 92-355 |
| Cow position: | chr11:2835195-2834934 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 94-355 |
| Cow position: | chr11:15835841-15835577 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 183, 39 |
| Conread position: | 9-246 |
| Cow position: | chr12:35347890-35347669 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 12-316 |
| Cow position: | chr12:542132-542425 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 13-301 |
| Cow position: | chr12:23491451-23491721 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 13-311 |
| Cow position: | chr12:8136705-8136988 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 13-329 |
| Cow position: | chr12:41288617-41288316 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 15-205 |
| Cow position: | chr12:5165665-5165485 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 15-311 |
| Cow position: | chr12:30501923-30501637 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 5-228 |
| Cow position: | chr13:19290161-19290375 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 9-192 |
| Cow position: | chr13:17328948-17329123 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 14-311 |
| Cow position: | chr13:6441915-6441634 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 16-354 |
| Cow position: | chr13:25882304-25881974 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 20-316 |
| Cow position: | chr13:55780462-55780744 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 6-248 |
| Cow position: | chr14:24124572-24124326 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 6-353 |
| Cow position: | chr14:31759629-31759959 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 9-198 |
| Cow position: | chr14:41767000-41766823 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 13-311 |
| Cow position: | chr14:11564483-11564194 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 14-315 |
| Cow position: | chr14:49219279-49218992 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 15-224 |
| Cow position: | chr14:17610759-17610560 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 16-311 |
| Cow position: | chr14:38226063-38226343 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 17-250 |
| Cow position: | chr14:7598711-7598493 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 19-329 |
| Cow position: | chr14:13282726-13282430 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 2-317 |
| Cow position: | chr15:17287956-17287652 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 4-317 |
| Cow position: | chr15:33260251-33260550 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 9-297 |
| Cow position: | chr15:33718211-33717930 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 9-311 |
| Cow position: | chr15:50870410-50870117 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 14-223 |
| Cow position: | chr15:47341439-47341241 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 14-311 |
| Cow position: | chr15:24097550-24097269 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 5 |
| Conread position: | 14-313 |
| Cow position: | chr15:32876969-32876691 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 16-275 |
| Cow position: | chr15:19256798-19257048 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 16-329 |
| Cow position: | chr15:3778234-3777931 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 7-283 |
| Cow position: | chr16:28855603-28855860 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 53, 35 |
| Conread position: | 10-299 |
| Cow position: | chr16:12018372-12018096 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 13-317 |
| Cow position: | chr16:13777511-13777219 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 13-329 |
| Cow position: | chr16:25263204-25262908 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 14-311 |
| Cow position: | chr16:19722558-19722269 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 14-317 |
| Cow position: | chr16:28473332-28473616 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 15-317 |
| Cow position: | chr16:50874238-50874532 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 15-329 |
| Cow position: | chr16:4846061-4846366 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 23-223 |
| Cow position: | chr16:45680905-45681094 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 166, 32 |
| Conread position: | 99-317 |
| Cow position: | chr16:23533474-23533689 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-257 |
| Cow position: | chr17:4298308-4298059 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 7-275 |
| Cow position: | chr17:4941041-4941300 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 9-355 |
| Cow position: | chr17:26173564-26173236 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 13-329 |
| Cow position: | chr17:10843424-10843125 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 12-311 |
| Cow position: | chr18:37541100-37540812 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 231, 84 |
| Conread position: | 13-332 |
| Cow position: | chr18:2296717-2297025 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 14-256 |
| Cow position: | chr18:226027-226263 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 14-313 |
| Cow position: | chr18:30232173-30232443 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 16-310 |
| Cow position: | chr18:23682513-23682793 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 94-317 |
| Cow position: | chr18:29863291-29863513 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 14-298 |
| Cow position: | chr19:26804404-26804677 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 14-311 |
| Cow position: | chr19:35982162-35981878 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 14-328 |
| Cow position: | chr19:39726183-39725885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 18-294 |
| Cow position: | chr19:13095282-13095550 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 108, 73 |
| Conread position: | 9-312 |
| Cow position: | chr2:26909600-26909320 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 283, 10 |
| Conread position: | 9-327 |
| Cow position: | chr2:64766077-64766369 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 9-329 |
| Cow position: | chr2:39116632-39116323 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 13-310 |
| Cow position: | chr2:30924301-30924016 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 13-311 |
| Cow position: | chr2:15751126-15750838 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 18 |
| Conread position: | 13-329 |
| Cow position: | chr2:35303286-35302986 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 14-190 |
| Cow position: | chr2:16414949-16414785 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 14-355 |
| Cow position: | chr2:62039206-62039536 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 20-255 |
| Cow position: | chr2:38082303-38082525 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 139, 76 |
| Conread position: | 6-242 |
| Cow position: | chr20:37583396-37583177 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 13-249 |
| Cow position: | chr20:27896094-27896310 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 14-317 |
| Cow position: | chr20:13816976-13816682 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 14-329 |
| Cow position: | chr20:13024975-13025280 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 16-239 |
| Cow position: | chr20:36197732-36197950 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 2-205 |
| Cow position: | chr21:29665494-29665690 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 9-313 |
| Cow position: | chr21:25604015-25604305 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 9-329 |
| Cow position: | chr21:20577921-20578227 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 13-329 |
| Cow position: | chr21:35389687-35389991 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 14-301 |
| Cow position: | chr21:29253731-29254014 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 14-329 |
| Cow position: | chr21:30858427-30858120 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 16-228 |
| Cow position: | chr21:36711064-36710868 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 201, 40 |
| Conread position: | 16-329 |
| Cow position: | chr21:22944270-22943970 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 5-329 |
| Cow position: | chr22:17677007-17676700 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 9-289 |
| Cow position: | chr22:24048541-24048808 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 9-355 |
| Cow position: | chr22:11970093-11970424 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 241, 61 |
| Conread position: | 14-353 |
| Cow position: | chr22:36357348-36357012 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 18-184 |
| Cow position: | chr22:15918601-15918757 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 20-328 |
| Cow position: | chr22:17893273-17893565 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 161-350 |
| Cow position: | chr22:38553195-38553003 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 13-224 |
| Cow position: | chr23:24487414-24487611 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 13-274 |
| Cow position: | chr23:26684226-26683975 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 14-311 |
| Cow position: | chr23:7065480-7065763 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 14-314 |
| Cow position: | chr23:6441747-6442026 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 15-329 |
| Cow position: | chr23:16611524-16611831 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 8-222 |
| Cow position: | chr24:12038903-12038695 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 13-329 |
| Cow position: | chr24:42938579-42938887 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 15-317 |
| Cow position: | chr24:17998706-17998412 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 94-331 |
| Cow position: | chr24:9390455-9390213 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 8-195 |
| Cow position: | chr25:30811009-30810832 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 15-199 |
| Cow position: | chr25:18452375-18452200 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 16-282 |
| Cow position: | chr25:34494075-34494338 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 8-329 |
| Cow position: | chr26:35520060-35520379 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 9-249 |
| Cow position: | chr26:19013195-19012967 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 16-311 |
| Cow position: | chr26:15892307-15892022 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 56-309 |
| Cow position: | chr26:1620942-1620695 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 35 |
| Conread position: | 8-189 |
| Cow position: | chr27:25677122-25677289 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 9-230 |
| Cow position: | chr27:26654152-26654359 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 14-308 |
| Cow position: | chr27:25964675-25964958 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 14-332 |
| Cow position: | chr27:17568385-17568078 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 28-301 |
| Cow position: | chr27:18954314-18954053 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 13-340 |
| Cow position: | chr28:4457664-4457337 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 14-256 |
| Cow position: | chr28:17209832-17210060 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 14-264 |
| Cow position: | chr28:28635437-28635206 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 14-280 |
| Cow position: | chr28:6506777-6506521 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 14-317 |
| Cow position: | chr28:23467246-23466954 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 17-317 |
| Cow position: | chr28:10326387-10326097 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 49-316 |
| Cow position: | chr28:34649666-34649408 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 56-311 |
| Cow position: | chr28:13880807-13880562 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 187, 36 |
| Conread position: | 8-317 |
| Cow position: | chr29:22949592-22949887 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 9-215 |
| Cow position: | chr29:37451396-37451208 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 9-254 |
| Cow position: | chr29:254194-253956 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 12-331 |
| Cow position: | chr29:3486348-3486042 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 13-298 |
| Cow position: | chr29:18413278-18413003 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 14-198 |
| Cow position: | chr29:26428027-26428200 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 35-317 |
| Cow position: | chr29:8511763-8511502 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 129, 55 |
| Conread position: | 2-201 |
| Cow position: | chr3:15557117-15556935 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 6-212 |
| Cow position: | chr3:31810520-31810329 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 6-238 |
| Cow position: | chr3:2627403-2627184 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 9-298 |
| Cow position: | chr3:37015457-37015177 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 9-316 |
| Cow position: | chr3:22867747-22868044 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 9-317 |
| Cow position: | chr3:3790845-3790530 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 9-317 |
| Cow position: | chr3:14881303-14881602 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 150, 81 |
| Conread position: | 13-208 |
| Cow position: | chr3:58211728-58211546 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 13-298 |
| Cow position: | chr3:45615548-45615281 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 13-317 |
| Cow position: | chr3:42993660-42993948 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 13-317 |
| Cow position: | chr3:75164855-75165145 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 41 |
| Conread position: | 13-327 |
| Cow position: | chr3:12254261-12253960 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 14-316 |
| Cow position: | chr3:58953373-58953081 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 16-311 |
| Cow position: | chr3:11509635-11509915 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 35-301 |
| Cow position: | chr3:46135879-46136136 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 4-290 |
| Cow position: | chr4:62672749-62672477 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 9-316 |
| Cow position: | chr4:1187328-1187625 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 9-317 |
| Cow position: | chr4:59555231-59555529 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 10-355 |
| Cow position: | chr4:45197176-45196830 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 12-213 |
| Cow position: | chr4:59119077-59119267 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 13-246 |
| Cow position: | chr4:24021103-24021328 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 14-313 |
| Cow position: | chr4:48502866-48502587 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 14-329 |
| Cow position: | chr4:44646727-44647035 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 16-237 |
| Cow position: | chr4:49697088-49697294 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 18-316 |
| Cow position: | chr4:26911798-26911511 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 35-319 |
| Cow position: | chr4:39840705-39840437 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 43-329 |
| Cow position: | chr4:1258021-1257737 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 63-317 |
| Cow position: | chr4:29528293-29528533 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 9-247 |
| Cow position: | chr5:34471814-34472038 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 9-328 |
| Cow position: | chr5:40897226-40897516 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 9-329 |
| Cow position: | chr5:46470618-46470927 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 12-317 |
| Cow position: | chr5:52605503-52605796 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 12-327 |
| Cow position: | chr5:12502043-12502346 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 13-329 |
| Cow position: | chr5:59771170-59770862 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 35-273 |
| Cow position: | chr5:70607410-70607184 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 1-316 |
| Cow position: | chr6:6163407-6163099 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 6-311 |
| Cow position: | chr6:43330150-43330446 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 9-170 |
| Cow position: | chr6:40031317-40031166 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 9-199 |
| Cow position: | chr6:67098493-67098318 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 9-311 |
| Cow position: | chr6:47848645-47848933 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-294 |
| Cow position: | chr6:13405490-13405218 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 13-250 |
| Cow position: | chr6:38988560-38988779 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 13-317 |
| Cow position: | chr6:16596244-16595951 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 14-316 |
| Cow position: | chr6:49815464-49815171 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 14-329 |
| Cow position: | chr6:2087783-2087475 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 35-311 |
| Cow position: | chr6:49626069-49625805 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 46-327 |
| Cow position: | chr6:58951897-58952165 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 56-317 |
| Cow position: | chr6:41414128-41414381 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 135, 40 |
| Conread position: | 6-294 |
| Cow position: | chr7:22341916-22342188 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 8-250 |
| Cow position: | chr7:42814192-42813962 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 10-228 |
| Cow position: | chr7:26829424-26829635 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 11-316 |
| Cow position: | chr7:14865624-14865330 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 13-311 |
| Cow position: | chr7:6534042-6534329 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 228, 46 |
| Conread position: | 13-311 |
| Cow position: | chr7:21877370-21877652 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 13-311 |
| Cow position: | chr7:23682242-23682527 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 76 |
| Conread position: | 13-329 |
| Cow position: | chr7:31447080-31447382 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 14-251 |
| Cow position: | chr7:36096390-36096163 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 15-316 |
| Cow position: | chr7:24059853-24059564 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 16-255 |
| Cow position: | chr7:51941604-51941377 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-216 |
| Cow position: | chr8:55343129-55342926 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 2-329 |
| Cow position: | chr8:27535321-27535633 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 9-292 |
| Cow position: | chr8:26196132-26196404 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 9-317 |
| Cow position: | chr8:16758283-16758578 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 9-332 |
| Cow position: | chr8:1385128-1384815 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 13-329 |
| Cow position: | chr8:9994988-9994691 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 14-320 |
| Cow position: | chr8:13696477-13696768 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 15-317 |
| Cow position: | chr8:19823039-19823329 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 15-329 |
| Cow position: | chr8:53004357-53004664 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 16-329 |
| Cow position: | chr8:38276159-38275854 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 35-316 |
| Cow position: | chr8:37169444-37169719 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 56-238 |
| Cow position: | chr8:33855309-33855137 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-311 |
| Cow position: | chr9:15987203-15986910 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 9-329 |
| Cow position: | chr9:49457519-49457208 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 13-264 |
| Cow position: | chr9:44580033-44580276 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 14-297 |
| Cow position: | chr9:4676392-4676119 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 21-318 |
| Cow position: | chr9:35023145-35022867 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 49-317 |
| Cow position: | chr9:62131191-62130934 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 2-280 |
| Cow position: | chrX:35028373-35028106 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 8-328 |
| Cow position: | chrX:28212923-28212613 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 9-317 |
| Cow position: | chrX:4299838-4300134 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 9-329 |
| Cow position: | chrX:25847918-25847614 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 14-311 |
| Cow position: | chrX:38152624-38152911 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 14-317 |
| Cow position: | chrX:502590-502884 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 14-329 |
| Cow position: | chrX:5649303-5649612 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 15-317 |
| Cow position: | chrX:40496485-40496773 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 16-311 |
| Cow position: | chrX:29029606-29029881 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 246, 75 |
| Conread position: | 186-327 |
| Cow position: | chrX:36839628-36839486 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |