Cow genome map
| Conread name: | rpigcb_13478.y1 |
| Conread position: | 3-340 |
| Cow position: | chr1:85529423-85529758 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 8-339 |
| Cow position: | chr1:75744262-75743931 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 11-340 |
| Cow position: | chr1:90604851-90605175 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 19-305 |
| Cow position: | chr1:63260515-63260796 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 25-281 |
| Cow position: | chr1:31964128-31964381 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 25-339 |
| Cow position: | chr1:3340648-3340331 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 25-340 |
| Cow position: | chr1:28877074-28876763 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 58-334 |
| Cow position: | chr1:55429300-55429569 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 242, 49 |
| Conread position: | 67-349 |
| Cow position: | chr1:96298344-96298620 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 11-340 |
| Cow position: | chr10:2504718-2504393 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 25-339 |
| Cow position: | chr10:32174428-32174119 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 34-277 |
| Cow position: | chr10:41626287-41626044 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 58-305 |
| Cow position: | chr10:27362149-27361905 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 61-339 |
| Cow position: | chr10:14942339-14942611 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 234, 52 |
| Conread position: | 69-343 |
| Cow position: | chr10:40707478-40707206 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 11-339 |
| Cow position: | chr11:75401875-75402195 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 14-334 |
| Cow position: | chr11:21842082-21842412 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 25-340 |
| Cow position: | chr11:74564172-74564483 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 61-340 |
| Cow position: | chr11:6047187-6047466 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 78-339 |
| Cow position: | chr11:67951310-67951565 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 133-340 |
| Cow position: | chr11:30701020-30700813 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 182 |
| Conread position: | 170-339 |
| Cow position: | chr11:10364884-10365052 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 14-285 |
| Cow position: | chr12:13957477-13957207 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 25-339 |
| Cow position: | chr12:6469373-6469679 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 61-339 |
| Cow position: | chr12:25265448-25265720 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 121-340 |
| Cow position: | chr12:19713627-19713845 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 22-339 |
| Cow position: | chr13:17820988-17820680 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 29-339 |
| Cow position: | chr13:24370678-24370988 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 61-345 |
| Cow position: | chr13:32980562-32980839 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 66-340 |
| Cow position: | chr13:49514425-49514150 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 127, 251 |
| Conread position: | 66-340 |
| Cow position: | chr14:41081100-41081368 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 232, 54 |
| Conread position: | 1-339 |
| Cow position: | chr15:26079013-26078680 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 31-339 |
| Cow position: | chr15:23567742-23567436 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 58-339 |
| Cow position: | chr15:39090675-39090943 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 58-340 |
| Cow position: | chr15:794605-794332 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 61-305 |
| Cow position: | chr15:33376392-33376153 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 120-339 |
| Cow position: | chr15:34283599-34283381 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 1-334 |
| Cow position: | chr16:35255581-35255912 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 25-339 |
| Cow position: | chr16:659805-659492 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 34-338 |
| Cow position: | chr16:36768947-36768642 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 58-333 |
| Cow position: | chr17:29715469-29715738 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 62 |
| Conread position: | 62-305 |
| Cow position: | chr17:3388575-3388339 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 141-340 |
| Cow position: | chr17:2006333-2006137 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 32-305 |
| Cow position: | chr19:15071312-15071040 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 143-305 |
| Cow position: | chr19:39077898-39077735 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-336 |
| Cow position: | chr2:76180676-76181007 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 34-340 |
| Cow position: | chr2:41057969-41058280 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 56-382 |
| Cow position: | chr2:15701911-15702232 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 61-338 |
| Cow position: | chr2:45312240-45312515 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 133-340 |
| Cow position: | chr2:32391935-32391730 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 142-339 |
| Cow position: | chr2:16410889-16410692 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 173 |
| Conread position: | 156-334 |
| Cow position: | chr2:22669339-22669516 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 61-333 |
| Cow position: | chr20:9419264-9419529 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 25-340 |
| Cow position: | chr21:29907975-29908308 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 58-339 |
| Cow position: | chr21:44658058-44657784 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 58-340 |
| Cow position: | chr21:5634760-5634480 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 66-340 |
| Cow position: | chr21:31706811-31706532 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 126, 139 |
| Conread position: | 134-339 |
| Cow position: | chr21:36297166-36296963 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 136-334 |
| Cow position: | chr21:23489665-23489863 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 156, 178 |
| Conread position: | 165-349 |
| Cow position: | chr21:29500501-29500319 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-328 |
| Cow position: | chr22:9695957-9695638 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 4-248 |
| Cow position: | chr22:6513351-6513594 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 166, 31 |
| Conread position: | 61-339 |
| Cow position: | chr22:16203685-16203416 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 26-334 |
| Cow position: | chr23:26829167-26828863 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 61-339 |
| Cow position: | chr23:23949672-23949396 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 15-340 |
| Cow position: | chr24:13373476-13373801 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 62-339 |
| Cow position: | chr24:31067076-31067346 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 66-339 |
| Cow position: | chr24:12090946-12090681 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 144-389 |
| Cow position: | chr24:29180249-29180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 183, 163 |
| Conread position: | 203-416 |
| Cow position: | chr24:26555369-26555158 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 25-319 |
| Cow position: | chr25:4522108-4522396 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 95-340 |
| Cow position: | chr25:19093976-19093731 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 157, 122 |
| Conread position: | 131-339 |
| Cow position: | chr25:25827068-25826856 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 25-339 |
| Cow position: | chr26:13706260-13706569 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 25-339 |
| Cow position: | chr26:19797109-19796800 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 120-338 |
| Cow position: | chr26:29488964-29488748 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 136-338 |
| Cow position: | chr26:19178032-19177829 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 112, 174 |
| Conread position: | 61-333 |
| Cow position: | chr27:3239729-3239463 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 193, 59 |
| Conread position: | 133-332 |
| Cow position: | chr27:22330304-22330112 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 4-337 |
| Cow position: | chr28:4046885-4046551 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 1-343 |
| Cow position: | chr29:19596516-19596859 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 61-333 |
| Cow position: | chr29:17077910-17077650 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 119-343 |
| Cow position: | chr29:44945043-44944815 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 148 |
| Conread position: | 5-339 |
| Cow position: | chr3:57900816-57900484 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 13-340 |
| Cow position: | chr3:54346523-54346864 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 16-340 |
| Cow position: | chr3:43425002-43424675 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 17-340 |
| Cow position: | chr3:25690489-25690172 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 40-339 |
| Cow position: | chr3:60389317-60389029 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 43-343 |
| Cow position: | chr3:62075945-62075644 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 218 |
| Conread position: | 57-334 |
| Cow position: | chr3:26304795-26304524 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 156-339 |
| Cow position: | chr3:16752658-16752840 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 34-332 |
| Cow position: | chr4:40958321-40958026 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 61-340 |
| Cow position: | chr4:43895876-43896148 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 66-339 |
| Cow position: | chr4:1007508-1007242 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 73-340 |
| Cow position: | chr4:38825659-38825926 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 130-337 |
| Cow position: | chr4:45644708-45644910 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 165-333 |
| Cow position: | chr4:5984465-5984631 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 171-340 |
| Cow position: | chr4:64986106-64985937 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 201-340 |
| Cow position: | chr4:26540752-26540612 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 19-279 |
| Cow position: | chr5:62341657-62341387 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 29-373 |
| Cow position: | chr5:34709525-34709191 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 58-342 |
| Cow position: | chr5:15722593-15722877 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 175, 62 |
| Conread position: | 61-339 |
| Cow position: | chr5:31145083-31145348 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 222, 16 |
| Conread position: | 1-329 |
| Cow position: | chr6:2088436-2088110 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 1-339 |
| Cow position: | chr6:7175346-7175683 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 12-340 |
| Cow position: | chr6:25223506-25223832 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 25-378 |
| Cow position: | chr6:39998580-39998923 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 30-340 |
| Cow position: | chr6:16737767-16737461 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 58-334 |
| Cow position: | chr6:29077445-29077174 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 241, 62 |
| Conread position: | 61-305 |
| Cow position: | chr6:39088485-39088247 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 61-333 |
| Cow position: | chr6:57309084-57308819 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 133-329 |
| Cow position: | chr6:5302751-5302946 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 142-339 |
| Cow position: | chr6:50446268-50446465 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 153, 173 |
| Conread position: | 1-339 |
| Cow position: | chr7:59660522-59660192 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 7-352 |
| Cow position: | chr7:43414980-43415326 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 14-214 |
| Cow position: | chr7:11051978-11051771 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 16-349 |
| Cow position: | chr7:41169923-41169584 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 19-333 |
| Cow position: | chr7:34412523-34412837 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 25-340 |
| Cow position: | chr7:23091066-23090752 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 29-339 |
| Cow position: | chr7:26737568-26737874 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 61-334 |
| Cow position: | chr7:11419434-11419700 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 148-346 |
| Cow position: | chr7:43109890-43110090 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 174-339 |
| Cow position: | chr7:64013271-64013106 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-340 |
| Cow position: | chr7:5333883-5334043 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-333 |
| Cow position: | chr8:50429955-50430273 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 15-340 |
| Cow position: | chr8:2410353-2410029 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 23-330 |
| Cow position: | chr8:18395457-18395152 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 25-339 |
| Cow position: | chr8:8987241-8987549 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 61-332 |
| Cow position: | chr8:42424566-42424827 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 120-334 |
| Cow position: | chr8:12779209-12779423 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 135-339 |
| Cow position: | chr8:46615391-46615188 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 139-339 |
| Cow position: | chr8:24908706-24908904 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 159, 77 |
| Conread position: | 25-339 |
| Cow position: | chr9:29825627-29825936 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 25-349 |
| Cow position: | chr9:59432336-59432012 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 30-204 |
| Cow position: | chr9:41527406-41527232 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 34-332 |
| Cow position: | chr9:34689259-34688969 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 46-334 |
| Cow position: | chr9:32812669-32812957 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 68-340 |
| Cow position: | chr9:11524074-11523808 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 117-340 |
| Cow position: | chr9:33658887-33659109 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 142-305 |
| Cow position: | chr9:3312003-3311840 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-340 |
| Cow position: | chr9:57300895-57301068 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 1-334 |
| Cow position: | chrX:35609745-35609419 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 11-340 |
| Cow position: | chrX:22811639-22811314 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 15-333 |
| Cow position: | chrX:1499342-1499023 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 34-340 |
| Cow position: | chrX:31489241-31488939 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 137-340 |
| Cow position: | chrX:10301749-10301547 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 139-339 |
| Cow position: | chrX:4482579-4482379 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 143 |
| Conread position: | 180-339 |
| Cow position: | chrX:8796060-8795902 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 0 |