Non-Coding RNA Search

Cow genome map


           Conread name:
           rplac_6992.y1
        

               Conread position:
               71-352
               

               Cow position:
               chr1:31158157-31158433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               79-350
               

               Cow position:
               chr1:49595448-49595729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               79-352
               

               Cow position:
               chr1:87031961-87031683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               154, 80
               

               Conread position:
               79-354
               

               Cow position:
               chr1:90320464-90320741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               83-348
               

               Cow position:
               chr1:15917073-15916815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               87-352
               

               Cow position:
               chr1:43226367-43226635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               97-346
               

               Cow position:
               chr1:97432813-97432571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               97-352
               

               Cow position:
               chr1:62137974-62138218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               112-355
               

               Cow position:
               chr1:37556751-37556512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               122, 97
               

               Conread position:
               152-354
               

               Cow position:
               chr1:80960923-80960724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               78-350
               

               Cow position:
               chr10:33265062-33265329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               79-348
               

               Cow position:
               chr10:36505401-36505671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               81-351
               

               Cow position:
               chr10:45507346-45507607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 86
               

               Conread position:
               81-352
               

               Cow position:
               chr10:4402942-4402678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               83-350
               

               Cow position:
               chr10:60427872-60428141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               83-350
               

               Cow position:
               chr10:60486338-60486080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               216, 44
               

               Conread position:
               83-355
               

               Cow position:
               chr10:25976613-25976343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 167
               

               Conread position:
               84-350
               

               Cow position:
               chr10:2085968-2086234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               87-354
               

               Cow position:
               chr10:68980987-68980728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 55
               

               Conread position:
               97-347
               

               Cow position:
               chr10:33345391-33345641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               202, 163
               

               Conread position:
               97-350
               

               Cow position:
               chr10:10062570-10062312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               108-355
               

               Cow position:
               chr10:41230897-41230659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               115-354
               

               Cow position:
               chr10:4336580-4336820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 150
               

               Conread position:
               118-350
               

               Cow position:
               chr10:35669253-35669482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               152-352
               

               Cow position:
               chr10:27128018-27128210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               34-351
               

               Cow position:
               chr11:9969214-9969533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               73-353
               

               Cow position:
               chr11:22592887-22593166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               78-350
               

               Cow position:
               chr11:15354047-15353781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               122, 150
               

               Conread position:
               79-354
               

               Cow position:
               chr11:53922406-53922133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               80-350
               

               Cow position:
               chr11:53204247-53203981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               216, 6
               

               Conread position:
               80-350
               

               Cow position:
               chr11:75057502-75057240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               156, 23
               

               Conread position:
               81-349
               

               Cow position:
               chr11:56392306-56392035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               184, 6
               

               Conread position:
               82-357
               

               Cow position:
               chr11:15909670-15909943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               117, 82
               

               Conread position:
               84-347
               

               Cow position:
               chr11:44338330-44338070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               134, 28
               

               Conread position:
               96-350
               

               Cow position:
               chr11:22556885-22556630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               98, 65
               

               Conread position:
               97-352
               

               Cow position:
               chr11:84212633-84212890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 136
               

               Conread position:
               106-352
               

               Cow position:
               chr11:15406344-15406586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               157-352
               

               Cow position:
               chr11:9340249-9340048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 113
               

               Conread position:
               69-352
               

               Cow position:
               chr12:6118524-6118807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               70-354
               

               Cow position:
               chr12:26318843-26319127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               126, 15
               

               Conread position:
               84-352
               

               Cow position:
               chr12:27353135-27353394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               87-353
               

               Cow position:
               chr12:23786696-23786952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               111-350
               

               Cow position:
               chr12:13225718-13225474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               68-348
               

               Cow position:
               chr13:34825074-34824798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 163
               

               Conread position:
               69-346
               

               Cow position:
               chr13:12708639-12708362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 141
               

               Conread position:
               69-348
               

               Cow position:
               chr13:21277002-21277279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               174, 120
               

               Conread position:
               79-350
               

               Cow position:
               chr13:52277933-52278202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               79-352
               

               Cow position:
               chr13:56463195-56463474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               177, 152
               

               Conread position:
               81-352
               

               Cow position:
               chr13:40188554-40188819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               81-354
               

               Cow position:
               chr13:12612593-12612309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               83-352
               

               Cow position:
               chr13:47850145-47850427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 87
               

               Conread position:
               84-351
               

               Cow position:
               chr13:2838698-2838967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               84-352
               

               Cow position:
               chr13:8409827-8409572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               86-347
               

               Cow position:
               chr13:38263897-38263637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 145
               

               Conread position:
               87-349
               

               Cow position:
               chr13:5289612-5289348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               105-352
               

               Cow position:
               chr13:2832680-2832933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               105-362
               

               Cow position:
               chr13:32802358-32802614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               123-355
               

               Cow position:
               chr13:49286516-49286283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               154, 92
               

               Conread position:
               81-354
               

               Cow position:
               chr14:35263548-35263813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               81-355
               

               Cow position:
               chr14:19733791-19733515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               83-352
               

               Cow position:
               chr14:25132173-25132443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               113, 156
               

               Conread position:
               111-350
               

               Cow position:
               chr14:42801533-42801778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 98
               

               Conread position:
               136-350
               

               Cow position:
               chr14:20523335-20523550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 131
               

               Conread position:
               66-350
               

               Cow position:
               chr15:40640626-40640353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               69-348
               

               Cow position:
               chr15:33490340-33490619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               77-352
               

               Cow position:
               chr15:22965759-22965489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               78-352
               

               Cow position:
               chr15:18755108-18755385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               137, 131
               

               Conread position:
               79-355
               

               Cow position:
               chr15:48290181-48289897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               83-348
               

               Cow position:
               chr15:20433241-20432981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               213, 44
               

               Conread position:
               83-350
               

               Cow position:
               chr15:34717989-34717719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               142, 156
               

               Conread position:
               84-352
               

               Cow position:
               chr15:38324291-38324020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 59
               

               Conread position:
               85-352
               

               Cow position:
               chr15:24544780-24545049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               97-350
               

               Cow position:
               chr15:22971596-22971848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 135
               

               Conread position:
               97-350
               

               Cow position:
               chr15:32907013-32907265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               103, 133
               

               Conread position:
               108-352
               

               Cow position:
               chr15:34224997-34225244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               131, 11
               

               Conread position:
               115-350
               

               Cow position:
               chr15:9077035-9076807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               124-352
               

               Cow position:
               chr15:34215764-34215542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               175, 43
               

               Conread position:
               131-355
               

               Cow position:
               chr15:6283551-6283329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               112, 61
               

               Conread position:
               76-354
               

               Cow position:
               chr16:40384847-40384577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               79-350
               

               Cow position:
               chr16:44755654-44755915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               79-352
               

               Cow position:
               chr16:36882315-36882063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               185, 25
               

               Conread position:
               83-347
               

               Cow position:
               chr16:33339646-33339382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               187, 77
               

               Conread position:
               86-352
               

               Cow position:
               chr16:16840129-16840388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 60
               

               Conread position:
               96-352
               

               Cow position:
               chr16:30665316-30665568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 166
               

               Conread position:
               97-354
               

               Cow position:
               chr16:27550208-27550458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               112-359
               

               Cow position:
               chr16:17026506-17026747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 105
               

               Conread position:
               78-354
               

               Cow position:
               chr17:28210180-28209915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               152, 188
               

               Conread position:
               81-352
               

               Cow position:
               chr17:28100413-28100685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               84-352
               

               Cow position:
               chr17:35997956-35998216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 27
               

               Conread position:
               84-355
               

               Cow position:
               chr17:33303489-33303759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               90-352
               

               Cow position:
               chr17:37976816-37977081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 153
               

               Conread position:
               96-347
               

               Cow position:
               chr17:26073018-26073266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               97-350
               

               Cow position:
               chr17:28035536-28035290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               163, 44
               

               Conread position:
               97-351
               

               Cow position:
               chr17:24996518-24996259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 170
               

               Conread position:
               97-352
               

               Cow position:
               chr17:32337285-32337545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 171
               

               Conread position:
               110-349
               

               Cow position:
               chr17:32530670-32530909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 96
               

               Conread position:
               117-352
               

               Cow position:
               chr17:20700023-20700256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 124
               

               Conread position:
               152-355
               

               Cow position:
               chr17:42535025-42535219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               63-354
               

               Cow position:
               chr18:7445999-7445706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               133, 104
               

               Conread position:
               67-352
               

               Cow position:
               chr18:43779323-43779602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               209, 5
               

               Conread position:
               70-351
               

               Cow position:
               chr18:33872811-33873090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               79-350
               

               Cow position:
               chr18:21240291-21240018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 189
               

               Conread position:
               79-352
               

               Cow position:
               chr18:9854522-9854794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               184, 31
               

               Conread position:
               83-357
               

               Cow position:
               chr18:23051443-23051724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               84-350
               

               Cow position:
               chr18:17358499-17358765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 59
               

               Conread position:
               84-350
               

               Cow position:
               chr18:19274232-19273965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               185, 147
               

               Conread position:
               84-355
               

               Cow position:
               chr18:32538561-32538827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               87-355
               

               Cow position:
               chr18:7085978-7085716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               127, 56
               

               Conread position:
               96-355
               

               Cow position:
               chr18:17358158-17357902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               115-355
               

               Cow position:
               chr18:6090255-6090498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 151
               

               Conread position:
               116-352
               

               Cow position:
               chr18:39751324-39751562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               118-352
               

               Cow position:
               chr18:42722795-42722561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               119-352
               

               Cow position:
               chr18:21357946-21357714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               154-350
               

               Cow position:
               chr18:740887-740687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 113
               

               Conread position:
               63-352
               

               Cow position:
               chr19:36997226-36997501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               205, 32
               

               Conread position:
               79-348
               

               Cow position:
               chr19:16808977-16808713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               116, 73
               

               Conread position:
               79-352
               

               Cow position:
               chr19:37859573-37859311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 115
               

               Conread position:
               79-355
               

               Cow position:
               chr19:35461852-35462131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               83-349
               

               Cow position:
               chr19:1631395-1631648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 77
               

               Conread position:
               97-360
               

               Cow position:
               chr19:41851075-41851335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 226
               

               Conread position:
               115-352
               

               Cow position:
               chr19:44007887-44007654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 148
               

               Conread position:
               129-352
               

               Cow position:
               chr19:43416423-43416644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               139-352
               

               Cow position:
               chr19:40367967-40367760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               141-352
               

               Cow position:
               chr19:39795947-39795741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               155, 68
               

               Conread position:
               83-352
               

               Cow position:
               chr2:52671788-52671520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               83-352
               

               Cow position:
               chr2:64102242-64102508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 45
               

               Conread position:
               84-346
               

               Cow position:
               chr2:16370157-16369903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               84-352
               

               Cow position:
               chr2:79658979-79659244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 5
               

               Conread position:
               90-351
               

               Cow position:
               chr2:86053871-86053614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 103
               

               Conread position:
               96-348
               

               Cow position:
               chr2:10553447-10553702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 184
               

               Conread position:
               97-348
               

               Cow position:
               chr2:71743955-71743710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               100-350
               

               Cow position:
               chr2:42467262-42467517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               114-352
               

               Cow position:
               chr2:64505071-64505321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               79-354
               

               Cow position:
               chr20:8407280-8407010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               55, 5
               

               Conread position:
               83-352
               

               Cow position:
               chr20:12575075-12575353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               147, 84
               

               Conread position:
               97-366
               

               Cow position:
               chr20:14933905-14933644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               103, 70
               

               Conread position:
               131-350
               

               Cow position:
               chr20:26318990-26319202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               69, 80
               

               Conread position:
               69-350
               

               Cow position:
               chr21:31447330-31447611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               79-350
               

               Cow position:
               chr21:5091289-5091018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               83-352
               

               Cow position:
               chr21:20316146-20315893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               83-354
               

               Cow position:
               chr21:46385718-46385982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               84-354
               

               Cow position:
               chr21:34767747-34767480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 145
               

               Conread position:
               95-350
               

               Cow position:
               chr21:4539747-4539491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               98-354
               

               Cow position:
               chr21:12271770-12271515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 112
               

               Conread position:
               152-354
               

               Cow position:
               chr21:21126989-21126788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               81-350
               

               Cow position:
               chr22:25881412-25881144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               120, 70
               

               Conread position:
               81-355
               

               Cow position:
               chr22:7288602-7288326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               78, 126
               

               Conread position:
               82-350
               

               Cow position:
               chr22:34085068-34085339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               148, 156
               

               Conread position:
               83-352
               

               Cow position:
               chr22:35073746-35073473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 45
               

               Conread position:
               85-352
               

               Cow position:
               chr22:27666619-27666361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               194, 71
               

               Conread position:
               90-350
               

               Cow position:
               chr22:39310168-39309909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               187, 77
               

               Conread position:
               96-352
               

               Cow position:
               chr22:7237828-7238085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 145
               

               Conread position:
               98-350
               

               Cow position:
               chr22:27566810-27567056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 106
               

               Conread position:
               101-367
               

               Cow position:
               chr22:41876902-41876638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               99, 57
               

               Conread position:
               128-354
               

               Cow position:
               chr22:30065060-30065283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               81-352
               

               Cow position:
               chr23:7904637-7904368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               81-352
               

               Cow position:
               chr23:26581809-26582066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               83-350
               

               Cow position:
               chr23:10956716-10956454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               135, 118
               

               Conread position:
               83-352
               

               Cow position:
               chr23:30338642-30338377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 149
               

               Conread position:
               83-354
               

               Cow position:
               chr23:31615581-31615308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               147, 182
               

               Conread position:
               84-351
               

               Cow position:
               chr23:13504660-13504927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 174
               

               Conread position:
               84-352
               

               Cow position:
               chr23:17492912-17492646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 87
               

               Conread position:
               86-348
               

               Cow position:
               chr23:35312900-35313155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               112, 55
               

               Conread position:
               99-352
               

               Cow position:
               chr23:26292810-26293062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               115-355
               

               Cow position:
               chr23:11400193-11399959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               161, 117
               

               Conread position:
               79-354
               

               Cow position:
               chr24:39902548-39902822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               114, 186
               

               Conread position:
               81-352
               

               Cow position:
               chr24:20289098-20289357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 86
               

               Conread position:
               83-352
               

               Cow position:
               chr24:15415984-15416254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 72
               

               Conread position:
               99-356
               

               Cow position:
               chr24:35638253-35638513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               114, 139
               

               Conread position:
               115-349
               

               Cow position:
               chr24:24626281-24626512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               73-355
               

               Cow position:
               chr25:9870299-9870573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               78-346
               

               Cow position:
               chr25:8099261-8098993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 154
               

               Conread position:
               78-354
               

               Cow position:
               chr25:14013175-14012899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               199, 159
               

               Conread position:
               79-350
               

               Cow position:
               chr25:24120908-24121165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               79-352
               

               Cow position:
               chr25:2196589-2196309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               79-354
               

               Cow position:
               chr25:4258702-4258973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 84
               

               Conread position:
               83-352
               

               Cow position:
               chr25:9467604-9467330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 108
               

               Conread position:
               84-350
               

               Cow position:
               chr25:17717671-17717412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               215, 67
               

               Conread position:
               90-350
               

               Cow position:
               chr25:30161964-30162209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               97-355
               

               Cow position:
               chr25:38382973-38382714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               133-350
               

               Cow position:
               chr25:27423665-27423887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               65-352
               

               Cow position:
               chr26:26828745-26828454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               202, 180
               

               Conread position:
               66-348
               

               Cow position:
               chr26:25478225-25477939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               176, 23
               

               Conread position:
               66-349
               

               Cow position:
               chr26:21638441-21638712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               162, 29
               

               Conread position:
               79-349
               

               Cow position:
               chr26:231049-231310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               210, 55
               

               Conread position:
               79-352
               

               Cow position:
               chr26:19859645-19859372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               121, 50
               

               Conread position:
               83-363
               

               Cow position:
               chr26:10598977-10599261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               84-355
               

               Cow position:
               chr26:16612680-16612404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 102
               

               Conread position:
               89-350
               

               Cow position:
               chr26:11789845-11789599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               192, 99
               

               Conread position:
               90-352
               

               Cow position:
               chr26:11959519-11959775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 140
               

               Conread position:
               90-352
               

               Cow position:
               chr26:19328516-19328262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               206, 62
               

               Conread position:
               97-350
               

               Cow position:
               chr26:23213002-23212740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 55
               

               Conread position:
               97-352
               

               Cow position:
               chr26:6737007-6736748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               142, 6
               

               Conread position:
               99-352
               

               Cow position:
               chr26:7521559-7521812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               133, 91
               

               Conread position:
               152-352
               

               Cow position:
               chr26:14398920-14399120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               79-352
               

               Cow position:
               chr27:15761354-15761628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               120-352
               

               Cow position:
               chr27:11006110-11006341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 8
               

               Conread position:
               79-350
               

               Cow position:
               chr28:22843806-22843543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               80-348
               

               Cow position:
               chr28:17127702-17127430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               123, 153
               

               Conread position:
               83-350
               

               Cow position:
               chr28:3544409-3544663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               84-348
               

               Cow position:
               chr28:3562950-3562691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 107
               

               Conread position:
               84-348
               

               Cow position:
               chr28:9916928-9917198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               164, 13
               

               Conread position:
               97-355
               

               Cow position:
               chr28:1571445-1571191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 133
               

               Conread position:
               101-354
               

               Cow position:
               chr28:19247282-19247530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 69
               

               Conread position:
               115-350
               

               Cow position:
               chr28:27680314-27680092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               79-352
               

               Cow position:
               chr29:22318061-22317798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               160, 31
               

               Conread position:
               81-352
               

               Cow position:
               chr29:34283497-34283758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               84-350
               

               Cow position:
               chr29:5177792-5178062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               153, 23
               

               Conread position:
               97-356
               

               Cow position:
               chr29:36688657-36688395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               172-342
               

               Cow position:
               chr29:20653454-20653280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               69-350
               

               Cow position:
               chr3:44394172-44393900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               146, 14
               

               Conread position:
               79-350
               

               Cow position:
               chr3:76157833-76157569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               217, 109
               

               Conread position:
               79-352
               

               Cow position:
               chr3:67001888-67002167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               80-352
               

               Cow position:
               chr3:50587651-50587383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               78, 166
               

               Conread position:
               81-349
               

               Cow position:
               chr3:38004329-38004057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               81-352
               

               Cow position:
               chr3:8044122-8044385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 168
               

               Conread position:
               81-354
               

               Cow position:
               chr3:53572176-53572454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               83-350
               

               Cow position:
               chr3:40896703-40896440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               87-350
               

               Cow position:
               chr3:31779807-31779532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               138, 226
               

               Conread position:
               89-352
               

               Cow position:
               chr3:10039693-10039424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               90-350
               

               Cow position:
               chr3:72262555-72262296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               77, 142
               

               Conread position:
               97-350
               

               Cow position:
               chr3:12276059-12275814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               98-352
               

               Cow position:
               chr3:70353330-70353578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               201, 94
               

               Conread position:
               102-352
               

               Cow position:
               chr3:44444679-44444934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               117-352
               

               Cow position:
               chr3:16882076-16882313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               120-352
               

               Cow position:
               chr3:31793420-31793654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               153-350
               

               Cow position:
               chr3:61836377-61836573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               73-352
               

               Cow position:
               chr4:1985181-1984904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 143
               

               Conread position:
               81-371
               

               Cow position:
               chr4:38695068-38694779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               82-352
               

               Cow position:
               chr4:20245760-20245490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               161, 64
               

               Conread position:
               85-352
               

               Cow position:
               chr4:52717050-52717322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               113, 169
               

               Conread position:
               85-353
               

               Cow position:
               chr4:2587742-2587476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               90-354
               

               Cow position:
               chr4:50988853-50988587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               96-354
               

               Cow position:
               chr4:41168683-41168433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               97-350
               

               Cow position:
               chr4:58160837-58161083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               177, 68
               

               Conread position:
               115-350
               

               Cow position:
               chr4:34028384-34028151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               69-352
               

               Cow position:
               chr5:45601596-45601870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 122
               

               Conread position:
               72-352
               

               Cow position:
               chr5:3466798-3467077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 194
               

               Conread position:
               81-351
               

               Cow position:
               chr5:48062095-48062360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               81-352
               

               Cow position:
               chr5:22889944-22890214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               81-352
               

               Cow position:
               chr5:72010589-72010330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 43
               

               Conread position:
               83-350
               

               Cow position:
               chr5:35445019-35444746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               61, 221
               

               Conread position:
               83-352
               

               Cow position:
               chr5:63836817-63836538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               90-352
               

               Cow position:
               chr5:62385424-62385145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               97-346
               

               Cow position:
               chr5:44437148-44437399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               100-350
               

               Cow position:
               chr5:17541388-17541146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 88
               

               Conread position:
               119-352
               

               Cow position:
               chr5:18479541-18479317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 137
               

               Conread position:
               152-349
               

               Cow position:
               chr5:51192739-51192547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               148, 75
               

               Conread position:
               78-348
               

               Cow position:
               chr6:31531192-31530923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               79-352
               

               Cow position:
               chr6:20028897-20029174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 208
               

               Conread position:
               81-346
               

               Cow position:
               chr6:7795174-7794912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               147, 64
               

               Conread position:
               81-355
               

               Cow position:
               chr6:50177719-50178002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               85-347
               

               Cow position:
               chr6:53101200-53100938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 126
               

               Conread position:
               97-351
               

               Cow position:
               chr6:32342530-32342779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               98-352
               

               Cow position:
               chr6:19429607-19429361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               198, 60
               

               Conread position:
               106-352
               

               Cow position:
               chr6:16278444-16278201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               115-346
               

               Cow position:
               chr6:20517514-20517286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               144, 52
               

               Conread position:
               128-352
               

               Cow position:
               chr6:47661828-47661612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               69-352
               

               Cow position:
               chr7:30715102-30715376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               79-350
               

               Cow position:
               chr7:36242387-36242127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               121, 64
               

               Conread position:
               81-351
               

               Cow position:
               chr7:2136811-2137076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 151
               

               Conread position:
               81-354
               

               Cow position:
               chr7:23270036-23269766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               89-350
               

               Cow position:
               chr7:31297356-31297095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               90-354
               

               Cow position:
               chr7:36274588-36274323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               185, 56
               

               Conread position:
               95-347
               

               Cow position:
               chr7:37183264-37183016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 29
               

               Conread position:
               97-352
               

               Cow position:
               chr7:9803515-9803761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               97-352
               

               Cow position:
               chr7:12316437-12316679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               164, 70
               

               Conread position:
               98-350
               

               Cow position:
               chr7:1780595-1780836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               99-352
               

               Cow position:
               chr7:60533937-60533688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               200, 102
               

               Conread position:
               101-352
               

               Cow position:
               chr7:23997121-23996876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               98, 103
               

               Conread position:
               101-352
               

               Cow position:
               chr7:65155561-65155805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               102-352
               

               Cow position:
               chr7:29576678-29576430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               79-349
               

               Cow position:
               chr8:23641416-23641699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               153, 5
               

               Conread position:
               79-354
               

               Cow position:
               chr8:31802219-31802496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 25
               

               Conread position:
               79-363
               

               Cow position:
               chr8:35521968-35521690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 14
               

               Conread position:
               81-352
               

               Cow position:
               chr8:19783886-19783616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               82-348
               

               Cow position:
               chr8:44446172-44445907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               82-354
               

               Cow position:
               chr8:29690020-29689746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               145, 128
               

               Conread position:
               83-351
               

               Cow position:
               chr8:35192839-35192580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               213, 10
               

               Conread position:
               83-352
               

               Cow position:
               chr8:25285534-25285799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               213, 38
               

               Conread position:
               98-354
               

               Cow position:
               chr8:16199039-16198783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               104-350
               

               Cow position:
               chr8:19713088-19712839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               168, 87
               

               Conread position:
               77-352
               

               Cow position:
               chr9:5867666-5867936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               82-350
               

               Cow position:
               chr9:20178451-20178717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               84-349
               

               Cow position:
               chr9:20225885-20226146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               97-361
               

               Cow position:
               chr9:47705950-47706208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               136, 52
               

               Conread position:
               115-351
               

               Cow position:
               chr9:33258934-33259165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               138-350
               

               Cow position:
               chr9:19885120-19885331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 101
               

               Conread position:
               62-353
               

               Cow position:
               chrX:519403-519128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               160, 73
               

               Conread position:
               69-352
               

               Cow position:
               chrX:16472056-16471785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               70-352
               

               Cow position:
               chrX:18798895-18799171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               226, 97
               

               Conread position:
               78-352
               

               Cow position:
               chrX:1394770-1394499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 85
               

               Conread position:
               79-349
               

               Cow position:
               chrX:27418835-27419098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 159
               

               Conread position:
               79-350
               

               Cow position:
               chrX:29024607-29024333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 165
               

               Conread position:
               79-356
               

               Cow position:
               chrX:5807534-5807818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               170, 112
               

               Conread position:
               81-350
               

               Cow position:
               chrX:68176-67906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               81-350
               

               Cow position:
               chrX:22075768-22076034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               108, 124
               

               Conread position:
               82-352
               

               Cow position:
               chrX:21287518-21287786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               178, 82
               

               Conread position:
               87-350
               

               Cow position:
               chrX:11914701-11914442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 146
               

               Conread position:
               90-348
               

               Cow position:
               chrX:26288541-26288796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 31
               

               Conread position:
               90-349
               

               Cow position:
               chrX:16554255-16553999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 163
               

               Conread position:
               90-352
               

               Cow position:
               chrX:26339747-26340008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               96-350
               

               Cow position:
               chrX:20655017-20654767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               97-346
               

               Cow position:
               chrX:46092292-46092541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               97-350
               

               Cow position:
               chrX:33673693-33673944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               97-350
               

               Cow position:
               chrX:38390689-38390938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               100-349
               

               Cow position:
               chrX:29871312-29871559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               100-350
               

               Cow position:
               chrX:34461549-34461305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               102-350
               

               Cow position:
               chrX:14625918-14625678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               102-352
               

               Cow position:
               chrX:30074912-30074670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               113, 17
               

               Conread position:
               107-346
               

               Cow position:
               chrX:6660608-6660367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               128, 63
               

               Conread position:
               108-352
               

               Cow position:
               chrX:20591111-20590860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               134-359
               

               Cow position:
               chrX:18459354-18459577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               140-355
               

               Cow position:
               chrX:42141549-42141758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 106
Conread position:	71-352
Cow position:	chr1:31158157-31158433 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	192
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	159, 13
Conread position:	79-350
Cow position:	chr1:49595448-49595729 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	210
Alignm E-value:	8e-40
Alignm gaps (pig, cow):	74, 59
Conread position:	79-352
Cow position:	chr1:87031961-87031683 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	199
Alignm E-value:	8.99998e-41
Alignm gaps (pig, cow):	154, 80
Conread position:	79-354
Cow position:	chr1:90320464-90320741 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	198
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	45, 76
Conread position:	83-348
Cow position:	chr1:15917073-15916815 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	182
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	156, 96
Conread position:	87-352
Cow position:	chr1:43226367-43226635 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	195
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	143, 80
Conread position:	97-346
Cow position:	chr1:97432813-97432571 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	172
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	132, 63
Conread position:	97-352
Cow position:	chr1:62137974-62138218 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	178
Alignm E-value:	1e-20
Alignm gaps (pig, cow):	103, 32
Conread position:	112-355
Cow position:	chr1:37556751-37556512 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	164
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	122, 97
Conread position:	152-354
Cow position:	chr1:80960923-80960724 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	147
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	44, 29
Conread position:	78-350
Cow position:	chr10:33265062-33265329 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	187
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	104, 58
Conread position:	79-348
Cow position:	chr10:36505401-36505671 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	185
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	80, 160
Conread position:	81-351
Cow position:	chr10:45507346-45507607 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	189
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	120, 86
Conread position:	81-352
Cow position:	chr10:4402942-4402678 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	187
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	120, 0
Conread position:	83-350
Cow position:	chr10:60427872-60428141 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	189
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	117, 69
Conread position:	83-355
Cow position:	chr10:25976613-25976343 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	195
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	150, 167
Conread position:	84-350
Cow position:	chr10:2085968-2086234 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	181
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	31, 87
Conread position:	87-354
Cow position:	chr10:68980987-68980728 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	189
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	138, 55
Conread position:	97-347
Cow position:	chr10:33345391-33345641 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	170
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	202, 163
Conread position:	97-350
Cow position:	chr10:10062570-10062312 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	183
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	54, 39