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Cow genome map

           
Conread name:
           
rpldo0109_b3.y1
        

               
Conread position:
               
42-282
               

               
Cow position:
               
chr1:22778097-22777861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr1:50931784-50931579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr1:72790655-72790869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
59-299
               

               
Cow position:
               
chr1:25856184-25856412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
59-346
               

               
Cow position:
               
chr1:24561974-24561711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr1:60280611-60280915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
270, 63
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr1:92433542-92433853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr1:101634221-101634536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr1:9111493-9111165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr1:24571359-24571054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr1:39069450-39069115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr1:3340443-3340778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr1:30034072-30034386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 57
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr1:54933709-54934035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 28
               

               
Conread position:
               
60-300
               

               
Cow position:
               
chr1:95050625-95050397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr1:84240428-84240735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
61-329
               

               
Cow position:
               
chr1:26811291-26811023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr1:37309993-37309675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr1:38418597-38418911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 58
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr1:79590621-79590941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr1:79843993-79844309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr1:86597335-86597658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
227, 52
               

               
Conread position:
               
62-299
               

               
Cow position:
               
chr1:60554350-60554125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
62-307
               

               
Cow position:
               
chr1:19883834-19883594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr1:56718839-56719152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 56
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr1:11226721-11226405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 45
               

               
Conread position:
               
63-364
               

               
Cow position:
               
chr1:98618441-98618728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
64-385
               

               
Cow position:
               
chr1:71797369-71797067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 54
               

               
Conread position:
               
65-293
               

               
Cow position:
               
chr1:93111129-93110913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
65-323
               

               
Cow position:
               
chr1:76095745-76095992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr1:42053796-42053483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 48
               

               
Conread position:
               
66-240
               

               
Cow position:
               
chr1:13762071-13761901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr1:7790023-7789718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
223, 47
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr1:77762168-77762493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr1:12871494-12871171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr1:522804-523015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
221, 54
               

               
Conread position:
               
70-385
               

               
Cow position:
               
chr1:99642827-99642537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
260, 48
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr1:100816078-100816377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr1:51983184-51983423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr1:101551035-101551298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr1:78586435-78586182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
152, 93
               

               
Conread position:
               
157-388
               

               
Cow position:
               
chr1:58889690-58889460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
132, 97
               

               
Conread position:
               
44-306
               

               
Cow position:
               
chr10:20568471-20568721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
59-260
               

               
Cow position:
               
chr10:48389946-48389753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr10:15318146-15318350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
59-288
               

               
Cow position:
               
chr10:66212024-66211806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
59-359
               

               
Cow position:
               
chr10:18885464-18885156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr10:34661827-34661516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 23
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr10:60358218-60358536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr10:29278944-29279247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr10:53058187-53057856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr10:11247469-11247779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 54
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr10:24308404-24308096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr10:32093284-32093613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
230, 43
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr10:51288505-51288721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
60-361
               

               
Cow position:
               
chr10:41255408-41255110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr10:52288085-52287756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
61-275
               

               
Cow position:
               
chr10:1423208-1423010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr10:46378280-46377967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:10573346-10573658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 42
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:14189311-14189007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:29933029-29932702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:34662841-34662524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:38725160-38725465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:43451432-43451114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr10:46829366-46829680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 57
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr10:32928255-32928573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr10:24222678-24222362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 16
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr10:33084918-33084590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr10:44681012-44681328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr10:58066643-58066324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 59
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr10:15292730-15292937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr10:4711127-4711426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 50
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chr10:24972103-24971796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr10:53336905-53336600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 36
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr10:30281687-30281998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 13
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr10:30745899-30746206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 55
               

               
Conread position:
               
66-292
               

               
Cow position:
               
chr10:19093715-19093929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
223, 35
               

               
Conread position:
               
70-388
               

               
Cow position:
               
chr10:52278225-52278532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 44
               

               
Conread position:
               
73-287
               

               
Cow position:
               
chr10:34299989-34300184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
73-392
               

               
Cow position:
               
chr10:41396970-41397290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 30
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr10:46150084-46150306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
211, 31
               

               
Conread position:
               
135-316
               

               
Cow position:
               
chr10:60355626-60355802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr10:8403746-8404019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
138-390
               

               
Cow position:
               
chr10:47582553-47582807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr11:49935304-49935073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
59-365
               

               
Cow position:
               
chr11:34112744-34113062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr11:63157413-63157102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr11:31885009-31885332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 15
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr11:30171851-30172187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr11:38638616-38638936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr11:58989994-58990326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
60-392
               

               
Cow position:
               
chr11:32749595-32749923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 41
               

               
Conread position:
               
61-313
               

               
Cow position:
               
chr11:67295562-67295312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
61-365
               

               
Cow position:
               
chr11:75558549-75558257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr11:78819601-78819917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr11:44244633-44244291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr11:33350202-33349886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 50
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr11:47573089-47572759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr11:68571174-68570857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr11:72314038-72314361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 57
               

               
Conread position:
               
65-372
               

               
Cow position:
               
chr11:7873662-7873957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 38
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr11:64352222-64351905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr11:54134748-54134435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
135-303
               

               
Cow position:
               
chr11:17514653-17514817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr11:24030302-24030552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
154, 195
               

               
Conread position:
               
58-392
               

               
Cow position:
               
chr12:40806872-40807192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
59-246
               

               
Cow position:
               
chr12:43103544-43103719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr12:21828543-21828875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr12:3716548-3716209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
192, 59
               

               
Conread position:
               
61-299
               

               
Cow position:
               
chr12:28650391-28650622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
61-325
               

               
Cow position:
               
chr12:29428572-29428317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr12:35311202-35310886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr12:8172635-8172962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
195, 71
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr12:18944175-18943853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr12:18010913-18011230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 31
               

               
Conread position:
               
65-282
               

               
Cow position:
               
chr12:19715869-19715674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
66-389
               

               
Cow position:
               
chr12:4544521-4544186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
66-392
               

               
Cow position:
               
chr12:36013142-36012813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
67-378
               

               
Cow position:
               
chr12:28707891-28707584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
222, 51
               

               
Conread position:
               
67-387
               

               
Cow position:
               
chr12:5146303-5146621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr12:44766565-44766875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
68-386
               

               
Cow position:
               
chr12:1884033-1883717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
76-311
               

               
Cow position:
               
chr12:3905823-3906045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr12:12178085-12178263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 153
               

               
Conread position:
               
56-388
               

               
Cow position:
               
chr13:26079924-26079606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
56-392
               

               
Cow position:
               
chr13:19396826-19396500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
233, 70
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr13:45072951-45073149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr13:20465111-20465355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 205
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr13:40722213-40722443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr13:53069979-53069743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
59-329
               

               
Cow position:
               
chr13:24059860-24060112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
249, 63
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr13:17820792-17821099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 58
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr13:19426227-19426538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 55
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr13:19425436-19425744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr13:32825936-32826251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr13:37483793-37484114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr13:32836227-32835913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
61-287
               

               
Cow position:
               
chr13:3419426-3419207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr13:22117071-22116853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr13:24156337-24156119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr13:11821789-11821561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-313
               

               
Cow position:
               
chr13:54094464-54094219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
61-371
               

               
Cow position:
               
chr13:36346472-36346165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr13:27984972-27985264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
186, 13
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr13:3480221-3479900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
240, 61
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr13:22571030-22570688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
62-287
               

               
Cow position:
               
chr13:14063032-14063239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr13:4420778-4420516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr13:60690249-60690571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 56
               

               
Conread position:
               
65-299
               

               
Cow position:
               
chr13:50063641-50063865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
223, 53
               

               
Conread position:
               
65-390
               

               
Cow position:
               
chr13:15869588-15869274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr13:6552943-6552625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 55
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr13:21235225-21235534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
70-388
               

               
Cow position:
               
chr13:25062878-25062566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
73-392
               

               
Cow position:
               
chr13:42277129-42277431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
74-275
               

               
Cow position:
               
chr13:9587151-9587338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
98-392
               

               
Cow position:
               
chr13:50689948-50690241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
132-360
               

               
Cow position:
               
chr13:8651846-8652075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
135-301
               

               
Cow position:
               
chr13:17970590-17970757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
135-390
               

               
Cow position:
               
chr13:20243331-20243581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
135-390
               

               
Cow position:
               
chr13:36771015-36771271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
136-329
               

               
Cow position:
               
chr13:2839276-2839083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
153, 136
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr13:24754296-24754040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
25-388
               

               
Cow position:
               
chr14:25695946-25695594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
43-375
               

               
Cow position:
               
chr14:28708572-28708259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 75
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr14:46304769-46305092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
59-269
               

               
Cow position:
               
chr14:47591360-47591561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr14:5630719-5630506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
59-294
               

               
Cow position:
               
chr14:20518357-20518131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr14:34984369-34984140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
59-313
               

               
Cow position:
               
chr14:44083729-44083973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
59-333
               

               
Cow position:
               
chr14:36880275-36880006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chr14:17900005-17899714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
227, 36
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr14:25385357-25385675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr14:27792063-27791739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr14:27865608-27865923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
60-364
               

               
Cow position:
               
chr14:47936393-47936099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
229, 53
               

               
Conread position:
               
61-298
               

               
Cow position:
               
chr14:30758818-30758592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
61-360
               

               
Cow position:
               
chr14:1802598-1802880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
228, 46
               

               
Conread position:
               
61-378
               

               
Cow position:
               
chr14:28988217-28987917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr14:34395131-34395450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr14:24683597-24683916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr14:36440449-36440125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr14:45513020-45512709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
62-291
               

               
Cow position:
               
chr14:5169599-5169834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
62-300
               

               
Cow position:
               
chr14:34354958-34355187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr14:13723074-13723390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 50
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr14:35650674-35650997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
65-387
               

               
Cow position:
               
chr14:18940791-18941089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 46
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr14:14589093-14589405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
66-385
               

               
Cow position:
               
chr14:50027732-50027432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
68-392
               

               
Cow position:
               
chr14:35543996-35544306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 55
               

               
Conread position:
               
69-297
               

               
Cow position:
               
chr14:5836454-5836240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr14:10912464-10912764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr14:18130229-18130494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr14:28378826-28378578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr14:8784640-8784388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
46-388
               

               
Cow position:
               
chr15:32226303-32226626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 54
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr15:16927476-16927689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr15:21894392-21894182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr15:24993931-24994150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
59-303
               

               
Cow position:
               
chr15:19725139-19725370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
59-360
               

               
Cow position:
               
chr15:49258644-49258360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr15:608736-608446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr15:13285622-13285294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr15:13669330-13669643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr15:35041296-35041610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr15:39363435-39363756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr15:41087289-41087602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr15:9870831-9871155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr15:30046962-30047284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr15:35824786-35825014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
228, 53
               

               
Conread position:
               
61-311
               

               
Cow position:
               
chr15:4817217-4817457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
61-313
               

               
Cow position:
               
chr15:39406533-39406296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-375
               

               
Cow position:
               
chr15:1776556-1776865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr15:45112138-45111819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr15:20352415-20352093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr15:50302777-50302438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
65-313
               

               
Cow position:
               
chr15:29811423-29811187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
65-385
               

               
Cow position:
               
chr15:21695604-21695910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 55
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr15:25666646-25666968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
66-312
               

               
Cow position:
               
chr15:38883773-38883538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr15:12723794-12723557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr15:16112974-16112660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
68-392
               

               
Cow position:
               
chr15:23332298-23332626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
75-388
               

               
Cow position:
               
chr15:29910660-29910974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
135-372
               

               
Cow position:
               
chr15:52148729-52148494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
42-363
               

               
Cow position:
               
chr16:37474441-37474128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 74
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr16:49230264-49229939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 62
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr16:41576265-41576460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr16:29205942-29205628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr16:40561740-40562061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 55
               

               
Conread position:
               
60-312
               

               
Cow position:
               
chr16:45263840-45263595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
61-291
               

               
Cow position:
               
chr16:46254205-46253976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr16:53087074-53086846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr16:11304607-11304366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
61-326
               

               
Cow position:
               
chr16:33235721-33235472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
61-335
               

               
Cow position:
               
chr16:3111674-3111913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
264, 62
               

               
Conread position:
               
61-371
               

               
Cow position:
               
chr16:28922293-28922600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr16:25174282-25174582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr16:23563653-23563966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr16:48398727-48398417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr16:13698020-13698342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr16:32522726-32523046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr16:42970414-42970097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 34
               

               
Conread position:
               
62-300
               

               
Cow position:
               
chr16:27817893-27817658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr16:51043150-51043467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr16:22810525-22810310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr16:56149830-56150139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr16:22158087-22157766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr16:13176917-13177228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
128-385
               

               
Cow position:
               
chr16:16425036-16424778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
128-390
               

               
Cow position:
               
chr16:49141987-49141727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr16:19643473-19643721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr16:42339780-42340034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr16:31159988-31159744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr17:21924089-21923890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr17:6082102-6082398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
59-382
               

               
Cow position:
               
chr17:41029501-41029817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr17:4601986-4601681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr17:20800371-20800684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:5748254-5747927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:5899927-5900248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:21807268-21806932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:28539596-28539903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
266, 30
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:29472036-29472345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 49
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr17:40701220-40701541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr17:27305720-27306033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr17:35223104-35223443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 59
               

               
Conread position:
               
61-387
               

               
Cow position:
               
chr17:35184589-35184904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 39
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr17:11102233-11101924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr17:14034103-14033774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr17:23101657-23101336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 61
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr17:34317160-34316834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
62-389
               

               
Cow position:
               
chr17:18569343-18569034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr17:20269173-20269477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr17:26230500-26230814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 51
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr17:29715628-29715311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 36
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr17:5898963-5898655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
195, 45
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr17:21362975-21363277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
76-388
               

               
Cow position:
               
chr17:2006265-2006573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr17:18494907-18494641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr17:26764632-26764888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 149
               

               
Conread position:
               
42-362
               

               
Cow position:
               
chr18:13877269-13876958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
58-313
               

               
Cow position:
               
chr18:12123471-12123215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr18:27457272-27457094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-298
               

               
Cow position:
               
chr18:25206815-25206592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr18:1955042-1954805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr18:29759200-29759453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr18:23682076-23681807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
59-376
               

               
Cow position:
               
chr18:19193863-19193565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
59-380
               

               
Cow position:
               
chr18:48451156-48451458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr18:47183808-47183487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr18:50637980-50637666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr18:4182720-4182390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr18:40892735-40893088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr18:26844172-26843857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
228, 55
               

               
Conread position:
               
61-387
               

               
Cow position:
               
chr18:33606115-33606428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr18:33756375-33756675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr18:7964715-7965029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr18:37691112-37690813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr18:13292993-13293311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 59
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr18:50851853-50851524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
219, 47
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr18:36649207-36649438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
62-371
               

               
Cow position:
               
chr18:27194332-27194623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr18:47314824-47314497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr18:35295046-35295365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 62
               

               
Conread position:
               
63-292
               

               
Cow position:
               
chr18:23137730-23137512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr18:24021879-24022177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr18:38090097-38089771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 55
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr18:55119358-55119679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
66-382
               

               
Cow position:
               
chr18:6878138-6877839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 52
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr18:28539909-28539589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr18:16378460-16378773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 55
               

               
Conread position:
               
76-294
               

               
Cow position:
               
chr18:44484554-44484352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
135-303
               

               
Cow position:
               
chr18:10890796-10890962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
135-360
               

               
Cow position:
               
chr18:24267296-24267073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr18:6290325-6290580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr18:3179966-3180222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr18:30786397-30786243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
46-382
               

               
Cow position:
               
chr19:25655895-25655573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr19:30435699-30436039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr19:45878804-45879002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr19:47187663-47187433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr19:20433408-20433175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
59-316
               

               
Cow position:
               
chr19:10212885-10213127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr19:53801744-53801496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr19:34287314-34287629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 53
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr19:18016388-18016170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr19:29471083-29471328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr19:52214594-52214906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 65
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr19:19500047-19499737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
62-361
               

               
Cow position:
               
chr19:29416375-29416656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
226, 48
               

               
Conread position:
               
62-373
               

               
Cow position:
               
chr19:39697580-39697874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 33
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chr19:1901498-1901185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr19:29071217-29070888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr19:176314-176646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr19:24215586-24215849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
75-369
               

               
Cow position:
               
chr19:20316358-20316075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
214, 47
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr19:30232312-30232544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr19:21198693-21198945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr19:6892210-6891955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr19:10786791-10786536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr19:15068426-15068171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
40-311
               

               
Cow position:
               
chr2:46058837-46058578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
58-382
               

               
Cow position:
               
chr2:27338273-27337951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr2:27076212-27076546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr2:29802620-29802396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr2:19871975-19872237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
232, 61
               

               
Conread position:
               
59-357
               

               
Cow position:
               
chr2:45562969-45563252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
59-382
               

               
Cow position:
               
chr2:31457004-31457310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr2:56797734-56797412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr2:4796272-4796597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr2:16514302-16514620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr2:43473702-43474025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr2:43596653-43596336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr2:81927353-81927690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr2:1202662-1202887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
61-361
               

               
Cow position:
               
chr2:44189686-44189974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr2:32659711-32660020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 57
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr2:56737845-56737522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr2:30388895-30389218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr2:36008061-36007755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr2:28611577-28611255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 68
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr2:51921289-51920963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 61
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr2:77281454-77281775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 47
               

               
Conread position:
               
62-300
               

               
Cow position:
               
chr2:42938873-42938649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr2:24668656-24668991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr2:64522552-64522222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr2:5297257-5297574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr2:45517921-45518235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 57
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr2:22081185-22081511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
75-392
               

               
Cow position:
               
chr2:78744232-78744535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 37
               

               
Conread position:
               
101-352
               

               
Cow position:
               
chr2:29297003-29296761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
121-388
               

               
Cow position:
               
chr2:76861987-76861712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 218
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr2:82270050-82270299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr2:306267-306013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr20:4911646-4911840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
59-256
               

               
Cow position:
               
chr20:28067831-28067650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr20:4672484-4672715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
204, 61
               

               
Conread position:
               
59-304
               

               
Cow position:
               
chr20:13094472-13094236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
59-359
               

               
Cow position:
               
chr20:7527807-7527518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
59-363
               

               
Cow position:
               
chr20:5644380-5644676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
220, 36
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr20:5939419-5939099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr20:4706599-4706280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr20:34836307-34835999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
267, 61
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr20:35970502-35970815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 52
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr20:3599841-3599513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr20:13269184-13269500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr20:14719183-14718864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
61-286
               

               
Cow position:
               
chr20:5117027-5116814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
61-287
               

               
Cow position:
               
chr20:34776687-34776904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr20:20353355-20353049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr20:5538944-5539258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr20:14740529-14740221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr20:22850679-22850901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr20:11453797-11453483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr20:8429314-8429618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 48
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr20:32846916-32847230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 51
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr20:746581-746822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr21:31510925-31511137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
59-299
               

               
Cow position:
               
chr21:44861684-44861452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
59-303
               

               
Cow position:
               
chr21:6051055-6051289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr21:16292993-16293306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
59-376
               

               
Cow position:
               
chr21:3236107-3236411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
230, 58
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr21:23683120-23683447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr21:24887557-24887901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr21:34391388-34391078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr21:36657147-36657466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr21:30849359-30849045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
218, 63
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr21:18494545-18494863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr21:20549344-20549013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr21:24698055-24698388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
61-282
               

               
Cow position:
               
chr21:20243713-20243503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr21:12802203-12801975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr21:18289244-18289555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 57
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr21:34738174-34738491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 53
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr21:7815153-7814813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr21:33832068-33831752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
328, 52
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr21:13585538-13585315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
62-358
               

               
Cow position:
               
chr21:363234-363518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr21:8126204-8125910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
64-392
               

               
Cow position:
               
chr21:5455407-5455089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
65-385
               

               
Cow position:
               
chr21:23293570-23293267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 55
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr21:26633093-26632766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr21:37942104-37941790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr21:4998897-4998594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr21:28617189-28617480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr21:19237310-19237567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 43
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr21:42190526-42190275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr21:33579834-33580071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr21:2366983-2367233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr21:26865084-26865335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
154, 133
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr21:13070221-13069984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr22:22022380-22022717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 70
               

               
Conread position:
               
59-288
               

               
Cow position:
               
chr22:2624038-2623821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr22:3332374-3332691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr22:26106568-26106884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr22:27148449-27148771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr22:31497599-31497277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr22:46439596-46439286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr22:32951972-32952305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr22:7912995-7913307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr22:26315990-26316304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 63
               

               
Conread position:
               
61-360
               

               
Cow position:
               
chr22:877037-877319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 39
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr22:41045412-41045092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr22:39472860-39472550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
61-391
               

               
Cow position:
               
chr22:30689143-30689461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 47
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr22:12569780-12569445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr22:21502250-21502570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
62-341
               

               
Cow position:
               
chr22:13017267-13017003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
62-385
               

               
Cow position:
               
chr22:44740619-44740926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 54
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr22:11612942-11613251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 56
               

               
Conread position:
               
65-256
               

               
Cow position:
               
chr22:39602005-39602179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
65-301
               

               
Cow position:
               
chr22:24911581-24911810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
65-364
               

               
Cow position:
               
chr22:35161818-35161519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
65-382
               

               
Cow position:
               
chr22:12086861-12086559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr22:31870734-31870426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 48
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr22:13950697-13950999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr22:31213090-31213399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr22:40121345-40121047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
258, 41
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr22:10650091-10649887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr22:11969539-11969336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 149
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr23:5416743-5416959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr23:3282869-3282642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
59-382
               

               
Cow position:
               
chr23:19002558-19002244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr23:1640327-1640642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr23:2370886-2371206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
230, 51
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr23:16170208-16170529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr23:35937534-35937849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
60-311
               

               
Cow position:
               
chr23:27288748-27288502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr23:7324269-7324570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr23:20605787-20605447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 55
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr23:36146944-36146624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr23:3167761-3168081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
61-390
               

               
Cow position:
               
chr23:1670435-1670749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr23:18797184-18796854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 60
               

               
Conread position:
               
65-285
               

               
Cow position:
               
chr23:7221734-7221519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
65-390
               

               
Cow position:
               
chr23:6720755-6720444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
66-322
               

               
Cow position:
               
chr23:22606075-22605832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr23:25865164-25864853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr23:2033132-2033363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
68-386
               

               
Cow position:
               
chr23:7791392-7791086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
220, 33
               

               
Conread position:
               
75-274
               

               
Cow position:
               
chr23:21659484-21659676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
134-287
               

               
Cow position:
               
chr23:5420929-5420781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
135-300
               

               
Cow position:
               
chr23:16664987-16664830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr23:26986701-26986452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr23:20745009-20744761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr24:36729948-36730189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr24:27754181-27754499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 49
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr24:31816044-31816251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr24:17833959-17833727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr24:8886372-8886636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr24:16897355-16897087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr24:6341652-6341975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
60-392
               

               
Cow position:
               
chr24:4616255-4615936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 54
               

               
Conread position:
               
61-293
               

               
Cow position:
               
chr24:28601239-28601022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-315
               

               
Cow position:
               
chr24:34761330-34761568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
228, 55
               

               
Conread position:
               
61-331
               

               
Cow position:
               
chr24:36722222-36722478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr24:15372611-15372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
61-385
               

               
Cow position:
               
chr24:3794305-3794619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr24:40056227-40055917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 51
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr24:7001576-7001258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr24:32609131-32609448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
65-329
               

               
Cow position:
               
chr24:29191110-29191359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
223, 53
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr24:36174279-36173978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr24:12198531-12198214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
223, 36
               

               
Conread position:
               
135-295
               

               
Cow position:
               
chr24:23695370-23695214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
135-300
               

               
Cow position:
               
chr24:18331239-18331404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr24:6450086-6450320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr24:18742016-18741761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
140-392
               

               
Cow position:
               
chr24:38655537-38655282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr25:19367183-19366983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
59-316
               

               
Cow position:
               
chr25:40906764-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr25:598845-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr25:14569874-14570195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr25:26111796-26112101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr25:36779008-36779320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr25:2047043-2046721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
199, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr25:17658127-17658445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
62-335
               

               
Cow position:
               
chr25:35077149-35076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
227, 60
               

               
Conread position:
               
65-387
               

               
Cow position:
               
chr25:22314719-22315027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr25:22412960-22412651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
66-327
               

               
Cow position:
               
chr25:16316302-16316559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
73-389
               

               
Cow position:
               
chr25:18490601-18490900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr25:10011189-10010895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr25:6891956-6891692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr25:9943869-9943625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr25:11830319-11830065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
138-392
               

               
Cow position:
               
chr25:2414412-2414661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
59-242
               

               
Cow position:
               
chr26:9840723-9840559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr26:9604067-9604405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr26:1013327-1013660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr26:6030229-6029918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 58
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr26:6714753-6714437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr26:8820519-8820218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr26:31138197-31137879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
59-391
               

               
Cow position:
               
chr26:32670966-32670643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
61-258
               

               
Cow position:
               
chr26:3559495-3559309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
61-300
               

               
Cow position:
               
chr26:26282368-26282595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
62-289
               

               
Cow position:
               
chr26:8746500-8746288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
64-313
               

               
Cow position:
               
chr26:20130545-20130307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
65-364
               

               
Cow position:
               
chr26:3904600-3904889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
224, 51
               

               
Conread position:
               
66-375
               

               
Cow position:
               
chr26:9850549-9850260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
70-378
               

               
Cow position:
               
chr26:33012125-33011827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr26:11338036-11338335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 45
               

               
Conread position:
               
96-392
               

               
Cow position:
               
chr26:17571465-17571762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr26:12965056-12964841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
137-392
               

               
Cow position:
               
chr26:3725983-3726235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
157-392
               

               
Cow position:
               
chr26:17428326-17428088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr27:20284861-20284687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr27:4719454-4719763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr27:23472695-23472384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr27:19388468-19388145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr27:25784035-25783729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr27:26033799-26033489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr27:27064003-27064312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr27:6523502-6523168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr27:20866081-20866403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr27:21283523-21283200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr27:20828262-20828579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 54
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr27:27867239-27867565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr27:4664916-4664597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr27:2557262-2556933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr27:10306837-10307057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr27:10324200-10323980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
65-313
               

               
Cow position:
               
chr27:21452179-21452422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
210, 59
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr27:15508991-15509304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr27:24055420-24055671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
67-384
               

               
Cow position:
               
chr27:1354031-1353717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 51
               

               
Conread position:
               
135-287
               

               
Cow position:
               
chr27:30814840-30814684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
135-293
               

               
Cow position:
               
chr27:7648154-7648311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr27:17397076-17397319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
38-388
               

               
Cow position:
               
chr28:2280180-2279830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
58-214
               

               
Cow position:
               
chr28:19026648-19026494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr28:30370280-30370636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr28:13865321-13865537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr28:13881315-13881555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
59-314
               

               
Cow position:
               
chr28:31842163-31841922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
59-330
               

               
Cow position:
               
chr28:16387091-16387350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
59-341
               

               
Cow position:
               
chr28:34208233-34208497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
265, 57
               

               
Conread position:
               
59-360
               

               
Cow position:
               
chr28:8716976-8716686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr28:11752627-11752310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr28:34082495-34082187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
61-313
               

               
Cow position:
               
chr28:2629293-2629047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
61-367
               

               
Cow position:
               
chr28:2522898-2523202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
61-378
               

               
Cow position:
               
chr28:24671793-24672098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 59
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr28:7697481-7697168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
265, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr28:17762174-17762493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr28:22132444-22132766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
62-365
               

               
Cow position:
               
chr28:32174173-32174465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr28:11827018-11827329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
66-384
               

               
Cow position:
               
chr28:23801015-23801320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr28:22359137-22359389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr28:5837674-5837952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
142-392
               

               
Cow position:
               
chr28:5817439-5817686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
58-295
               

               
Cow position:
               
chr29:23154737-23154956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr29:40300454-40300259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr29:95066-94837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr29:29770973-29770747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
59-376
               

               
Cow position:
               
chr29:6218069-6217731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr29:4875392-4875079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 63
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr29:24952178-24952509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr29:19761788-19762100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr29:24578366-24578712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
227, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr29:38910496-38910171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr29:20254911-20255224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
227, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr29:14116560-14116875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr29:17794927-17795253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
62-300
               

               
Cow position:
               
chr29:14050697-14050475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
227, 41
               

               
Conread position:
               
65-364
               

               
Cow position:
               
chr29:33520477-33520186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
65-382
               

               
Cow position:
               
chr29:24345946-24345642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr29:7960011-7959687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr29:11136368-11136058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
70-388
               

               
Cow position:
               
chr29:19755971-19756276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 52
               

               
Conread position:
               
135-288
               

               
Cow position:
               
chr29:27858386-27858539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr29:34298171-34298003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr29:26017933-26017686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
137-388
               

               
Cow position:
               
chr29:5948218-5947959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
37-313
               

               
Cow position:
               
chr3:62883441-62883709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr3:2118111-2118385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr3:39172020-39171801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
59-291
               

               
Cow position:
               
chr3:39970408-39970192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr3:4031407-4031634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr3:73467073-73467306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr3:5420384-5420060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr3:18393897-18393578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr3:26920387-26920702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr3:70566247-70565932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr3:8900903-8901228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr3:55010674-55010348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr3:38497424-38497762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
60-300
               

               
Cow position:
               
chr3:56400229-56400458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr3:3845349-3845095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
244, 61
               

               
Conread position:
               
61-365
               

               
Cow position:
               
chr3:56302147-56301840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
61-385
               

               
Cow position:
               
chr3:1831079-1830761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr3:11254653-11254344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr3:26554235-26553906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr3:27289417-27289743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr3:11410613-11410292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr3:17100503-17100176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr3:23169577-23169259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr3:24350617-24350938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
65-303
               

               
Cow position:
               
chr3:33693117-33693343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr3:9843073-9843394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
76-388
               

               
Cow position:
               
chr3:70130316-70130006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
228, 45
               

               
Conread position:
               
135-246
               

               
Cow position:
               
chr3:70894292-70894399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr3:47284391-47284644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
47-392
               

               
Cow position:
               
chr4:19584190-19584531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr4:68944670-68944363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 54
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr4:24119409-24119087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 68
               

               
Conread position:
               
59-267
               

               
Cow position:
               
chr4:35940488-35940296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr4:23508787-23508984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chr4:20298740-20298954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr4:21364706-21364945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
59-299
               

               
Cow position:
               
chr4:61066134-61066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr4:19493024-19493264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr4:8120658-8120344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr4:3475121-3475453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr4:10992701-10992381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr4:11091173-11090865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr4:13877700-13878014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr4:25369620-25369940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr4:37620386-37620061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr4:56409673-56410008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
60-371
               

               
Cow position:
               
chr4:10837854-10837550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr4:54190616-54190912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr4:59106396-59106161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr4:5777535-5777208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr4:18255373-18255685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr4:18519219-18519549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr4:34166458-34166153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
61-390
               

               
Cow position:
               
chr4:13143014-13142708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr4:67444638-67444970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
65-286
               

               
Cow position:
               
chr4:27287639-27287428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
65-312
               

               
Cow position:
               
chr4:37691909-37691683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
224, 37
               

               
Conread position:
               
65-378
               

               
Cow position:
               
chr4:18973955-18974244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr4:53134117-53134431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr4:57555472-57555786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
224, 57
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr4:25972406-25972719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 48
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr4:58834892-58834584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr4:20328200-20327889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr4:38998946-38999253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr4:8674199-8674432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
223, 37
               

               
Conread position:
               
66-383
               

               
Cow position:
               
chr4:3893241-3893545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr4:5610554-5610248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 53
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr4:53999995-53999680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr4:25889287-25889010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr4:22115158-22115428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
154, 85
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr4:22138663-22138414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr4:69017939-69018189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
48-392
               

               
Cow position:
               
chr5:2333004-2332654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr5:62436683-62437002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chr5:69099044-69099383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr5:53835235-53835443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr5:54110761-54110990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr5:63457008-63456799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
59-303
               

               
Cow position:
               
chr5:43991824-43992064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
59-370
               

               
Cow position:
               
chr5:59303742-59303432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
59-382
               

               
Cow position:
               
chr5:55176426-55176735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr5:44848474-44848166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr5:14630368-14630052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 61
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr5:15088725-15089041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
240, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr5:16894229-16893921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr5:34638433-34638745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 53
               

               
Conread position:
               
60-376
               

               
Cow position:
               
chr5:1054813-1054500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr5:10261702-10261384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 50
               

               
Conread position:
               
61-293
               

               
Cow position:
               
chr5:42727249-42727033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-328
               

               
Cow position:
               
chr5:24485872-24485620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
61-342
               

               
Cow position:
               
chr5:7721797-7722079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
61-359
               

               
Cow position:
               
chr5:17645345-17645067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 51
               

               
Conread position:
               
61-362
               

               
Cow position:
               
chr5:25231466-25231184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
61-370
               

               
Cow position:
               
chr5:4348145-4347877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr5:8024651-8024340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr5:23141035-23140718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr5:38831448-38831139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 59
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr5:51151819-51151508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr5:41532647-41532310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr5:55942855-55942538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 61
               

               
Conread position:
               
62-358
               

               
Cow position:
               
chr5:56442825-56443098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr5:55233226-55232953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
227, 59
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr5:28247720-28248036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 54
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr5:45025600-45025276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 49
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr5:59082649-59082336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 51
               

               
Conread position:
               
65-367
               

               
Cow position:
               
chr5:45941088-45940772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
65-385
               

               
Cow position:
               
chr5:27010835-27011145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr5:6129902-6130207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 57
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr5:46611558-46611231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr5:51858737-51858500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr5:16508634-16508950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr5:54405345-54405041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
73-327
               

               
Cow position:
               
chr5:46653448-46653696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
215, 40
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr5:60752534-60752321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
132-270
               

               
Cow position:
               
chr5:24996853-24996719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
132-388
               

               
Cow position:
               
chr5:55684725-55684982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr5:15425849-15426009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr5:48224971-48224719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
169, 99
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr5:41936189-41935939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
42-286
               

               
Cow position:
               
chr6:28101001-28100751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr6:143818-143610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
58-386
               

               
Cow position:
               
chr6:28476720-28477049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr6:1096033-1095796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
59-346
               

               
Cow position:
               
chr6:28156569-28156290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
59-365
               

               
Cow position:
               
chr6:119519-119824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
59-371
               

               
Cow position:
               
chr6:33949461-33949144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chr6:58370121-58370430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr6:9733277-9732971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr6:10612411-10612731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr6:36651978-36652288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr6:46570680-46570987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr6:52478889-52478553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
60-302
               

               
Cow position:
               
chr6:26914654-26914877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
61-269
               

               
Cow position:
               
chr6:40760735-40760939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
61-284
               

               
Cow position:
               
chr6:32335135-32335356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
61-322
               

               
Cow position:
               
chr6:46246539-46246304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
61-371
               

               
Cow position:
               
chr6:24757792-24757496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 59
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr6:46292773-46292469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr6:48872650-48872338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
227, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr6:28791384-28791707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
62-291
               

               
Cow position:
               
chr6:17326727-17326509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
65-375
               

               
Cow position:
               
chr6:33451531-33451822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
66-316
               

               
Cow position:
               
chr6:19695103-19695338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
67-322
               

               
Cow position:
               
chr6:61136728-61136967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr6:38994083-38993772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
70-256
               

               
Cow position:
               
chr6:28977484-28977312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
70-388
               

               
Cow position:
               
chr6:46465393-46465697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 48
               

               
Conread position:
               
75-284
               

               
Cow position:
               
chr6:50114417-50114609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
75-388
               

               
Cow position:
               
chr6:6944115-6943812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr6:60017691-60017934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr6:62925382-62925119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
136-389
               

               
Cow position:
               
chr6:55205822-55205569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
137-392
               

               
Cow position:
               
chr6:39358715-39358467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr7:9928864-9928654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chr7:61762911-61763142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr7:4840397-4840621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
59-303
               

               
Cow position:
               
chr7:49467430-49467200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr7:47876229-47875987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
59-376
               

               
Cow position:
               
chr7:53153550-53153252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr7:1261577-1261883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
59-383
               

               
Cow position:
               
chr7:31171391-31171086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 57
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr7:59438030-59438339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chr7:268546-268863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr7:5208971-5209293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
202, 57
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr7:42431379-42431695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr7:48815178-48815503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr7:50076168-50075855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr7:53988601-53988930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
59-390
               

               
Cow position:
               
chr7:48666983-48667300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
211, 24
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr7:12994716-12995035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr7:34412731-34412416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr7:49647918-49648240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr7:23818489-23818802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr7:44544511-44544197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
61-378
               

               
Cow position:
               
chr7:42296510-42296208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr7:10760301-10759997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr7:18256141-18255828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
227, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr7:13645803-13645478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr7:46187806-46188123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr7:13229152-13228947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
62-301
               

               
Cow position:
               
chr7:23090868-23091096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr7:58351345-58351080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr7:17591029-17591344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr7:15654514-15654200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 12
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr7:34433718-34433403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 46
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr7:49844482-49844153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
65-249
               

               
Cow position:
               
chr7:39988004-39988169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
65-291
               

               
Cow position:
               
chr7:42334926-42335141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
65-313
               

               
Cow position:
               
chr7:13848544-13848783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
65-389
               

               
Cow position:
               
chr7:59688095-59688413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr7:27515805-27515484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
260, 43
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr7:41297094-41296883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
68-319
               

               
Cow position:
               
chr7:34083241-34083479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr7:35779016-35779319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr7:9661746-9661489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr7:7096480-7096175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
216, 49
               

               
Conread position:
               
77-361
               

               
Cow position:
               
chr7:68772937-68772651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr7:39529412-39529129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
247, 33
               

               
Conread position:
               
121-319
               

               
Cow position:
               
chr7:11951951-11952148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
135-287
               

               
Cow position:
               
chr7:36995979-36996125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr7:30044029-30044265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr7:44039115-44039360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 23
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr7:53361759-53361505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
136-389
               

               
Cow position:
               
chr7:15566391-15566642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
145-347
               

               
Cow position:
               
chr7:21228905-21228706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
179, 58
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr8:14933174-14932966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr8:58636295-58636608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr8:12539077-12538757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr8:18395255-18395570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr8:24904823-24905147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr8:1303436-1303750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 64
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr8:12814368-12814686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 30
               

               
Conread position:
               
61-311
               

               
Cow position:
               
chr8:55026488-55026725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
228, 53
               

               
Conread position:
               
61-313
               

               
Cow position:
               
chr8:22058686-22058443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
61-347
               

               
Cow position:
               
chr8:39182521-39182248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 47
               

               
Conread position:
               
61-371
               

               
Cow position:
               
chr8:42556719-42556419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr8:4745378-4745060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr8:1999155-1999466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 51
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr8:35291246-35290924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
227, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr8:45824405-45824742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr8:51861769-51862096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr8:55122925-55122609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 51
               

               
Conread position:
               
62-299
               

               
Cow position:
               
chr8:24868243-24868024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
227, 58
               

               
Conread position:
               
62-312
               

               
Cow position:
               
chr8:40744038-40743796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
227, 51
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr8:18404141-18404441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
65-376
               

               
Cow position:
               
chr8:16143654-16143952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr8:21206418-21206715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr8:27368623-27368940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
77-293
               

               
Cow position:
               
chr8:16092791-16092993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
212, 37
               

               
Conread position:
               
135-300
               

               
Cow position:
               
chr8:11611838-11611999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr8:42442773-42442996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr8:38464600-38464850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr8:6795043-6795285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr8:25387548-25387802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr8:672942-673194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr8:52230119-52229866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr8:53429366-53429615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 23
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr8:18049193-18049442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
59-286
               

               
Cow position:
               
chr9:30138670-30138448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
59-296
               

               
Cow position:
               
chr9:17871290-17871510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
230, 16
               

               
Conread position:
               
59-367
               

               
Cow position:
               
chr9:63654592-63654897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr9:22617133-22616827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 55
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr9:42628163-42628473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
59-391
               

               
Cow position:
               
chr9:19382851-19382520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr9:28747011-28747327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chr9:45756877-45756555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 77
               

               
Conread position:
               
61-293
               

               
Cow position:
               
chr9:55983214-55983434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-296
               

               
Cow position:
               
chr9:8289491-8289262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr9:1997644-1997338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr9:5839508-5839189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chr9:55651547-55651221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
61-390
               

               
Cow position:
               
chr9:20393617-20393933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 42
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr9:17410676-17410989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 48
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr9:18427245-18426923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 40
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr9:26478069-26477755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 48
               

               
Conread position:
               
62-291
               

               
Cow position:
               
chr9:19278826-19278603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
227, 60
               

               
Conread position:
               
62-304
               

               
Cow position:
               
chr9:33077789-33078022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr9:11750808-11750485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr9:38753664-38753993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr9:33056332-33056012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr9:10143926-10144131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr9:10665527-10665749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr9:23540937-23541152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr9:54610721-54611031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr9:62442795-62442484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr9:56773545-56773286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
134-286
               

               
Cow position:
               
chr9:34689134-34689282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
135-328
               

               
Cow position:
               
chr9:4126496-4126309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr9:19593863-19594113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
194, 146
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr9:34918832-34919066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr9:20680975-20681206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 130
               

               
Conread position:
               
44-351
               

               
Cow position:
               
chrX:27117488-27117782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chrX:45448184-45448425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
58-388
               

               
Cow position:
               
chrX:24169780-24169459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chrX:39352114-39351909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
59-287
               

               
Cow position:
               
chrX:22623993-22624209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
59-300
               

               
Cow position:
               
chrX:20131349-20131115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chrX:17200328-17200581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chrX:13785842-13785543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chrX:41594741-41594443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chrX:27019746-27020042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-386
               

               
Cow position:
               
chrX:11083069-11082760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 30
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:14974197-14973878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:16790276-16789982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:17497637-17497952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:25281949-25281612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:35288195-35288515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chrX:42470396-42470081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
59-392
               

               
Cow position:
               
chrX:32871245-32870926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
61-285
               

               
Cow position:
               
chrX:33493275-33493483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
61-296
               

               
Cow position:
               
chrX:17265508-17265283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
61-383
               

               
Cow position:
               
chrX:32128451-32128130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
228, 51
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chrX:3807936-3808264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
61-388
               

               
Cow position:
               
chrX:4633314-4632995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chrX:34238263-34238577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chrX:878827-878512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chrX:30981625-30981304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
62-331
               

               
Cow position:
               
chrX:21415621-21415886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chrX:37071944-37072260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 60
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chrX:43648214-43647887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
62-390
               

               
Cow position:
               
chrX:41122614-41122929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chrX:10415981-10415665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chrX:6654783-6654446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chrX:30143737-30143429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
223, 53
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chrX:20340343-20340031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
135-298
               

               
Cow position:
               
chrX:6695745-6695580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chrX:42171694-42171444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
150-380
               

               
Cow position:
               
chrX:7178528-7178755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
157-371
               

               
Cow position:
               
chrX:15545520-15545733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 173