Cow genome map
| Conread name: | rpliv0134_m23.y1 |
| Conread position: | 149-320 |
| Cow position: | chr1:46243963-46244131 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 167-320 |
| Cow position: | chr1:81825888-81826041 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-318 |
| Cow position: | chr10:25502406-25502621 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 105-320 |
| Cow position: | chr10:29744303-29744518 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-285 |
| Cow position: | chr10:25932018-25931850 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 104-327 |
| Cow position: | chr14:26159400-26159177 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 93 |
| Conread position: | 101-320 |
| Cow position: | chr15:6174398-6174615 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 101-320 |
| Cow position: | chr15:6184591-6184804 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 159-292 |
| Cow position: | chr15:527388-527520 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 101-291 |
| Cow position: | chr16:32592201-32592018 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 101-320 |
| Cow position: | chr16:23666704-23666486 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 118-296 |
| Cow position: | chr16:21566731-21566903 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 50-297 |
| Cow position: | chr17:31601852-31601601 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 101-320 |
| Cow position: | chr17:2805746-2805545 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 200-319 |
| Cow position: | chr17:24983407-24983288 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-226 |
| Cow position: | chr18:44762973-44762769 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 118-320 |
| Cow position: | chr18:32296994-32296805 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 122, 86 |
| Conread position: | 101-277 |
| Cow position: | chr19:36474994-36474819 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 103-320 |
| Cow position: | chr19:13877810-13877591 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 104-320 |
| Cow position: | chr19:28439724-28439923 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 158-296 |
| Cow position: | chr19:4324560-4324426 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 172-371 |
| Cow position: | chr19:35608870-35609074 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 128-320 |
| Cow position: | chr22:12964396-12964204 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-318 |
| Cow position: | chr23:11730710-11730499 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 96, 7 |
| Conread position: | 108-328 |
| Cow position: | chr23:23937574-23937354 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-306 |
| Cow position: | chr23:8201415-8201229 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 35, 142 |
| Conread position: | 155-302 |
| Cow position: | chr23:26323282-26323134 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 188-321 |
| Cow position: | chr24:16956787-16956918 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 156-317 |
| Cow position: | chr25:33789202-33789361 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 198-320 |
| Cow position: | chr25:24491869-24491990 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 104-326 |
| Cow position: | chr26:17662139-17661924 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 218, 61 |
| Conread position: | 104-299 |
| Cow position: | chr27:25168376-25168571 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-320 |
| Cow position: | chr28:8638305-8638583 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 103-328 |
| Cow position: | chr29:39588206-39588429 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 151 |
| Conread position: | 33-315 |
| Cow position: | chr3:69218938-69219234 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 101-247 |
| Cow position: | chr3:67824681-67824535 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 101-286 |
| Cow position: | chr3:35467337-35467151 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 101-318 |
| Cow position: | chr4:44648817-44649033 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 7 |
| Conread position: | 101-320 |
| Cow position: | chr5:2190721-2190502 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 104-320 |
| Cow position: | chr5:69097346-69097563 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1-320 |
| Cow position: | chr6:26948037-26947696 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 34-320 |
| Cow position: | chr7:43306217-43305919 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 288 |
| Conread position: | 101-319 |
| Cow position: | chr7:1791376-1791599 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 132, 7 |
| Conread position: | 101-320 |
| Cow position: | chr7:58446035-58445819 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 198, 7 |
| Conread position: | 101-295 |
| Cow position: | chrX:30096186-30096379 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 101-320 |
| Cow position: | chrX:41748730-41748941 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 108-318 |
| Cow position: | chrX:36190228-36190024 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 130, 34 |