Non-Coding RNA Search

Cow genome map


           Conread name:
           rplun0138_k1.y1
        

               Conread position:
               1-126
               

               Cow position:
               chr1:85792123-85791999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr1:58336278-58336152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr1:76545098-76545226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr1:76752210-76752341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-136
               

               Cow position:
               chr1:79636495-79636627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr1:12061772-12061906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr1:30534581-30534717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:33551367-33551231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr1:57568396-57568259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:62244203-62244340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr1:69403423-69403287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr1:72186437-72186574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:73070613-73070749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:85780337-85780473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr1:88131214-88131078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:91892680-91892816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:99913859-99913724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr1:102434596-102434732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr1:3385578-3385718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr1:25179590-25179728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-140
               

               Cow position:
               chr1:49973748-49973888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr1:58883625-58883765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr1:93854964-93854823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               1-143
               

               Cow position:
               chr1:30283106-30283248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-146
               

               Cow position:
               chr1:63605336-63605479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               1-151
               

               Cow position:
               chr1:72981710-72981560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr1:8825492-8825334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               1-160
               

               Cow position:
               chr1:21999514-21999673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr1:28873517-28873358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr1:42736894-42736736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr1:52358835-52358993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr1:69921995-69922154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-161
               

               Cow position:
               chr1:102549679-102549518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               1-208
               

               Cow position:
               chr1:86610275-86610059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr1:38386910-38387126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               1-216
               

               Cow position:
               chr1:21720653-21720430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 6
               

               Conread position:
               1-507
               

               Cow position:
               chr1:40512605-40513112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               1-508
               

               Cow position:
               chr1:72137445-72136907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               2-134
               

               Cow position:
               chr1:65386768-65386640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               2-139
               

               Cow position:
               chr1:56143895-56144031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-140
               

               Cow position:
               chr1:79456531-79456670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 32
               

               Conread position:
               2-140
               

               Cow position:
               chr1:82923737-82923877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-215
               

               Cow position:
               chr1:22344359-22344151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               2-216
               

               Cow position:
               chr1:88269769-88269994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               3-133
               

               Cow position:
               chr1:69537339-69537207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-139
               

               Cow position:
               chr1:33712507-33712371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               3-140
               

               Cow position:
               chr1:78290305-78290166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               3-141
               

               Cow position:
               chr1:59674892-59674751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-146
               

               Cow position:
               chr1:29033558-29033413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               3-151
               

               Cow position:
               chr1:48246285-48246138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               3-238
               

               Cow position:
               chr1:44100929-44101168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               4-138
               

               Cow position:
               chr1:87206987-87207125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-162
               

               Cow position:
               chr1:28723315-28723156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               4-162
               

               Cow position:
               chr1:97124248-97124090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               7-216
               

               Cow position:
               chr1:55321704-55321928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               13-139
               

               Cow position:
               chr1:94660113-94659989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               13-216
               

               Cow position:
               chr1:67287259-67287051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               34-213
               

               Cow position:
               chr1:58179293-58179484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               44-216
               

               Cow position:
               chr1:29413747-29413925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               192-470
               

               Cow position:
               chr1:84150172-84149881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               198-439
               

               Cow position:
               chr1:23051650-23051386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               211-504
               

               Cow position:
               chr1:86609981-86609683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               221-509
               

               Cow position:
               chr1:78361296-78361002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               236-509
               

               Cow position:
               chr1:25886618-25886896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               243-503
               

               Cow position:
               chr1:58179610-58179871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               243-508
               

               Cow position:
               chr1:31418419-31418691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               243-509
               

               Cow position:
               chr1:30027011-30027285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 223
               

               Conread position:
               245-509
               

               Cow position:
               chr1:89479845-89479571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 133
               

               Conread position:
               245-509
               

               Cow position:
               chr1:102556569-102556315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               281-479
               

               Cow position:
               chr1:29414113-29414311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               164, 90
               

               Conread position:
               281-501
               

               Cow position:
               chr1:5319236-5319017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               281-506
               

               Cow position:
               chr1:34689861-34689610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               307-508
               

               Cow position:
               chr1:13880586-13880387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               140, 164
               

               Conread position:
               329-491
               

               Cow position:
               chr1:88295495-88295328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               329-508
               

               Cow position:
               chr1:67901470-67901663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               334-508
               

               Cow position:
               chr1:45021754-45021930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 151
               

               Conread position:
               366-509
               

               Cow position:
               chr1:55322646-55322791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               377-509
               

               Cow position:
               chr1:94253319-94253185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr10:30685048-30685169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr10:8339863-8339737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               1-129
               

               Cow position:
               chr10:25359866-25359740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr10:124777-124644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               1-134
               

               Cow position:
               chr10:54978787-54978918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               1-139
               

               Cow position:
               chr10:7281628-7281763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr10:16925997-16925866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr10:21487382-21487246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-139
               

               Cow position:
               chr10:38344894-38345031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr10:38538037-38538174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr10:39040836-39040971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr10:57989527-57989663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr10:62408384-62408520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr10:19512071-19511932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr10:29846185-29846326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr10:21400211-21400353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-149
               

               Cow position:
               chr10:17432790-17432946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               1-200
               

               Cow position:
               chr10:44294453-44294645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               1-206
               

               Cow position:
               chr10:8326833-8327034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               1-215
               

               Cow position:
               chr10:31524562-31524350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr10:3542759-3542983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               1-216
               

               Cow position:
               chr10:28930925-28931151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               1-217
               

               Cow position:
               chr10:14861725-14861493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               1-507
               

               Cow position:
               chr10:38848179-38847635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               548
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 24
               

               Conread position:
               2-139
               

               Cow position:
               chr10:32651198-32651064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               2-143
               

               Cow position:
               chr10:41157906-41157765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               128, 32
               

               Conread position:
               3-141
               

               Cow position:
               chr10:34686364-34686226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr10:62217072-62216941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               4-147
               

               Cow position:
               chr10:46693929-46694075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               12-504
               

               Cow position:
               chr10:46192155-46191652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               335
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               17-180
               

               Cow position:
               chr10:42110785-42110609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               71-216
               

               Cow position:
               chr10:33347409-33347262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               211-320
               

               Cow position:
               chr10:15860703-15860819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               218-492
               

               Cow position:
               chr10:21900636-21900910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               242-509
               

               Cow position:
               chr10:22843315-22843038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               243-505
               

               Cow position:
               chr10:60490154-60489887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               243-509
               

               Cow position:
               chr10:3543047-3543298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               243-509
               

               Cow position:
               chr10:8327714-8327981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               243-509
               

               Cow position:
               chr10:28931251-28931525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               243-509
               

               Cow position:
               chr10:33347162-33346890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               281-464
               

               Cow position:
               chr10:37107568-37107384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               165, 55
               

               Conread position:
               281-481
               

               Cow position:
               chr10:41351241-41351436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               281-509
               

               Cow position:
               chr10:20371464-20371688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               156, 58
               

               Conread position:
               281-509
               

               Cow position:
               chr10:24298340-24298570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               322-509
               

               Cow position:
               chr10:15861654-15861849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               343-509
               

               Cow position:
               chr10:49310945-49310776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr10:8339330-8339186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               366-509
               

               Cow position:
               chr10:42629058-42628913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               370-505
               

               Cow position:
               chr10:54979041-54979177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               373-509
               

               Cow position:
               chr10:31524226-31524088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 62
               

               Conread position:
               1-129
               

               Cow position:
               chr11:53431961-53432087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr11:12350960-12351096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr11:19102381-19102512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr11:85393706-85393837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr11:4027458-4027594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:11988212-11988076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:12358319-12358456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:23877408-23877271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:24393424-24393286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:30125140-30125279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-139
               

               Cow position:
               chr11:38835326-38835462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:41170588-41170723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr11:44157148-44157284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr11:4270756-4270897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr11:10847547-10847406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr11:26124823-26124967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr11:44251898-44251763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr11:58134492-58134351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr11:67450596-67450454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-151
               

               Cow position:
               chr11:43514531-43514675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-166
               

               Cow position:
               chr11:84389732-84389568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               1-171
               

               Cow position:
               chr11:62229293-62229129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               1-214
               

               Cow position:
               chr11:28063946-28063721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr11:59369921-59369700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr11:30124314-30124542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               118, 199
               

               Conread position:
               1-216
               

               Cow position:
               chr11:10090781-10090551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr11:52885945-52886166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               1-218
               

               Cow position:
               chr11:39802547-39802319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               3-145
               

               Cow position:
               chr11:31874673-31874812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               4-141
               

               Cow position:
               chr11:37065013-37065148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               5-140
               

               Cow position:
               chr11:8887058-8887194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               5-141
               

               Cow position:
               chr11:256085-256224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               5-141
               

               Cow position:
               chr11:30305349-30305215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               7-192
               

               Cow position:
               chr11:66727472-66727274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               243-465
               

               Cow position:
               chr11:65161216-65161448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               243-476
               

               Cow position:
               chr11:81852195-81852437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               243-505
               

               Cow position:
               chr11:42429532-42429265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               243-509
               

               Cow position:
               chr11:10050907-10050639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               276-509
               

               Cow position:
               chr11:43733162-43732926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 104
               

               Conread position:
               282-509
               

               Cow position:
               chr11:3240788-3240559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               283-470
               

               Cow position:
               chr11:39802178-39801986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               291-490
               

               Cow position:
               chr11:28049441-28049646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               366-509
               

               Cow position:
               chr11:8283149-8283003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               368-504
               

               Cow position:
               chr11:30124964-30125106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr12:21942154-21942024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               1-134
               

               Cow position:
               chr12:14662241-14662377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr12:22205356-22205492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr12:25100670-25100805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr12:251670-251807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr12:1402882-1402741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr12:6406259-6406400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr12:11098632-11098493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr12:28765631-28765768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               134, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr12:42859437-42859576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-508
               

               Cow position:
               chr12:21500852-21500319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               346
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               2-196
               

               Cow position:
               chr12:3631477-3631680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               4-134
               

               Cow position:
               chr12:8311568-8311437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               4-134
               

               Cow position:
               chr12:21902329-21902197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               16-140
               

               Cow position:
               chr12:27932568-27932694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               243-509
               

               Cow position:
               chr12:48405728-48405465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               33, 151
               

               Conread position:
               1-126
               

               Cow position:
               chr13:30303447-30303322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-132
               

               Cow position:
               chr13:34868913-34868781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr13:33336252-33336381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-134
               

               Cow position:
               chr13:9044671-9044540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr13:3654150-3654289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr13:4483966-4483829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr13:22766195-22766058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-139
               

               Cow position:
               chr13:23003138-23003274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr13:35757412-35757276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr13:15924213-15924354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr13:30238416-30238276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr13:34042198-34042339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr13:3057946-3058088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr13:1592986-1593143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr13:6667949-6668113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr13:46731553-46731779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr13:48357733-48357510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               1-216
               

               Cow position:
               chr13:26844257-26844056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               1-217
               

               Cow position:
               chr13:20541866-20542101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               1-508
               

               Cow position:
               chr13:34937658-34937143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               343
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               2-134
               

               Cow position:
               chr13:34325394-34325525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-141
               

               Cow position:
               chr13:2908263-2908404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-216
               

               Cow position:
               chr13:34766704-34766920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               115, 31
               

               Conread position:
               4-126
               

               Cow position:
               chr13:34142494-34142617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               4-133
               

               Cow position:
               chr13:34693334-34693203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               18-146
               

               Cow position:
               chr13:11064014-11064143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               52-214
               

               Cow position:
               chr13:34186394-34186558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               85, 139
               

               Conread position:
               61-507
               

               Cow position:
               chr13:15451128-15451560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               59, 137
               

               Conread position:
               109-499
               

               Cow position:
               chr13:34766867-34767291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               35, 366
               

               Conread position:
               190-509
               

               Cow position:
               chr13:34111599-34111276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               243-415
               

               Cow position:
               chr13:46731850-46732026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               243-445
               

               Cow position:
               chr13:48357391-48357183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 101
               

               Conread position:
               245-456
               

               Cow position:
               chr13:16342975-16343191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               274-470
               

               Cow position:
               chr13:27922782-27922982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               282-509
               

               Cow position:
               chr13:34028335-34028104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               367-509
               

               Cow position:
               chr13:20542238-20542381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 90
               

               Conread position:
               383-509
               

               Cow position:
               chr13:54284687-54284564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               1-124
               

               Cow position:
               chr14:35386766-35386888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr14:17760853-17760977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               1-131
               

               Cow position:
               chr14:2284379-2284250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr14:22242928-22242792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               1-134
               

               Cow position:
               chr14:44287204-44287339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr14:5511869-5511733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:11154119-11154255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr14:13779001-13778866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr14:15276533-15276669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:16919643-16919779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr14:17685443-17685307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:20782503-20782367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:30596337-30596473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:44686090-44685954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr14:48254256-48254394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr14:5529109-5528968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr14:19328223-19328362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr14:28993807-28993948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr14:46465124-46464985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr14:22031375-22031530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr14:17001015-17001171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr14:37223948-37223789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr14:50110614-50110454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-161
               

               Cow position:
               chr14:19620267-19620107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr14:33342178-33341955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr14:34776269-34776045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               1-216
               

               Cow position:
               chr14:44256933-44257161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               2-160
               

               Cow position:
               chr14:16273250-16273408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               3-140
               

               Cow position:
               chr14:13303066-13302934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-141
               

               Cow position:
               chr14:46529271-46529132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               4-133
               

               Cow position:
               chr14:23690184-23690315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-162
               

               Cow position:
               chr14:7830495-7830654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               7-216
               

               Cow position:
               chr14:44377849-44377634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               17-141
               

               Cow position:
               chr14:13864051-13864177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               63-215
               

               Cow position:
               chr14:48825167-48825005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               243-509
               

               Cow position:
               chr14:37413752-37414018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               15, 208
               

               Conread position:
               245-411
               

               Cow position:
               chr14:37457674-37457846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               245-509
               

               Cow position:
               chr14:12609326-12609050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               258-504
               

               Cow position:
               chr14:45236128-45235877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 122
               

               Conread position:
               281-505
               

               Cow position:
               chr14:33675913-33675686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               281-509
               

               Cow position:
               chr14:22019488-22019261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               281-509
               

               Cow position:
               chr14:34775635-34775396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               282-509
               

               Cow position:
               chr14:44776890-44777124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               295-500
               

               Cow position:
               chr14:23259076-23259280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               295-507
               

               Cow position:
               chr14:44257322-44257536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               299-508
               

               Cow position:
               chr14:38146662-38146446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               366-509
               

               Cow position:
               chr14:35387134-35387280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 72
               

               Conread position:
               373-508
               

               Cow position:
               chr14:40339691-40339552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               1-129
               

               Cow position:
               chr15:21665698-21665824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr15:8750474-8750341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr15:17292486-17292353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               115, 29
               

               Conread position:
               1-139
               

               Cow position:
               chr15:2076696-2076560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr15:4385315-4385180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr15:4682278-4682140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr15:7260677-7260539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr15:18576762-18576626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr15:31358934-31358798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr15:37392538-37392400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:4922198-4922058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:6155901-6156046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               1-140
               

               Cow position:
               chr15:7837292-7837151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:8099536-8099395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:12421118-12421258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               1-140
               

               Cow position:
               chr15:15347071-15347212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:18332780-18332921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr15:32494339-32494479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-144
               

               Cow position:
               chr15:42936760-42936616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-146
               

               Cow position:
               chr15:32673501-32673643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-151
               

               Cow position:
               chr15:524813-524963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-160
               

               Cow position:
               chr15:19738005-19738164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               140, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr15:35753549-35753709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               1-162
               

               Cow position:
               chr15:1764137-1763977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               1-196
               

               Cow position:
               chr15:35735621-35735414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-209
               

               Cow position:
               chr15:51715005-51714786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               1-216
               

               Cow position:
               chr15:9429988-9429773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               1-216
               

               Cow position:
               chr15:16508045-16507812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr15:36626247-36626445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-217
               

               Cow position:
               chr15:24794397-24794190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-508
               

               Cow position:
               chr15:1237730-1237191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               2-214
               

               Cow position:
               chr15:21449746-21449524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               101, 30
               

               Conread position:
               3-140
               

               Cow position:
               chr15:51216634-51216496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               3-155
               

               Cow position:
               chr15:24295140-24294994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               3-214
               

               Cow position:
               chr15:40105917-40105696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr15:10787082-10787213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-133
               

               Cow position:
               chr15:17271352-17271481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               4-133
               

               Cow position:
               chr15:36648955-36648823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               4-141
               

               Cow position:
               chr15:38195534-38195394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-161
               

               Cow position:
               chr15:23156795-23156954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               6-136
               

               Cow position:
               chr15:328470-328339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 28
               

               Conread position:
               8-216
               

               Cow position:
               chr15:24716905-24716701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               12-124
               

               Cow position:
               chr15:4961683-4961571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               14-216
               

               Cow position:
               chr15:36642974-36642755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               32-216
               

               Cow position:
               chr15:686931-686745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               66-216
               

               Cow position:
               chr15:35647922-35648087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 148
               

               Conread position:
               243-416
               

               Cow position:
               chr15:51802073-51801892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               243-507
               

               Cow position:
               chr15:15265525-15265787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               243-508
               

               Cow position:
               chr15:686663-686397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               243-509
               

               Cow position:
               chr15:36626530-36626799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 148
               

               Conread position:
               245-509
               

               Cow position:
               chr15:12615211-12614934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               247-506
               

               Cow position:
               chr15:21449454-21449183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               281-506
               

               Cow position:
               chr15:16507684-16507454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               281-509
               

               Cow position:
               chr15:325042-324807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               282-431
               

               Cow position:
               chr15:36268744-36268893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-497
               

               Cow position:
               chr15:11624997-11624791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               292-509
               

               Cow position:
               chr15:9429628-9429411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               154, 98
               

               Conread position:
               301-509
               

               Cow position:
               chr15:40105545-40105334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               43, 165
               

               Conread position:
               305-508
               

               Cow position:
               chr15:2007613-2007406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               319-497
               

               Cow position:
               chr15:3842758-3842938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               366-506
               

               Cow position:
               chr15:35648224-35648361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               366-509
               

               Cow position:
               chr15:36642627-36642486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               409-509
               

               Cow position:
               chr15:51801673-51801570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr16:25085342-25085217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr16:43897570-43897701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-135
               

               Cow position:
               chr16:15184504-15184372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr16:5484020-5483888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr16:10437942-10437806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr16:12538225-12538360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr16:23983011-23982875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr16:40296477-40296613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:407331-407471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:1431858-1431718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:1567753-1567894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:2727587-2727728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:8816405-8816544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:15566441-15566302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr16:23252805-23252947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:25441325-25441184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:25457764-25457905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr16:26663452-26663309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr16:27734091-27734232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr16:28471402-28471542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               1-141
               

               Cow position:
               chr16:2239039-2239181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr16:34530022-34529880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr16:9930635-9930494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr16:31832326-31832184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-155
               

               Cow position:
               chr16:2411267-2411414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr16:25341667-25341507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 89
               

               Conread position:
               1-214
               

               Cow position:
               chr16:47473271-47473062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-218
               

               Cow position:
               chr16:23808122-23807904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               1-509
               

               Cow position:
               chr16:25257637-25257128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               2-208
               

               Cow position:
               chr16:18763921-18764134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               2-216
               

               Cow position:
               chr16:5890212-5890001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               3-133
               

               Cow position:
               chr16:2483442-2483574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr16:14430292-14430162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-133
               

               Cow position:
               chr16:20254612-20254743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-509
               

               Cow position:
               chr16:25156180-25156699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               350
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               11-201
               

               Cow position:
               chr16:49235142-49235331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               26-216
               

               Cow position:
               chr16:29033723-29033522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               100, 8
               

               Conread position:
               35-216
               

               Cow position:
               chr16:49256456-49256641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               74-506
               

               Cow position:
               chr16:5652716-5652291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               300
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               243-457
               

               Cow position:
               chr16:25154182-25153959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               243-505
               

               Cow position:
               chr16:9930334-9930066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               243-509
               

               Cow position:
               chr16:32935968-32935698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 231
               

               Conread position:
               257-465
               

               Cow position:
               chr16:44966936-44966729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               189, 159
               

               Conread position:
               281-508
               

               Cow position:
               chr16:5889669-5889444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               164, 67
               

               Conread position:
               281-509
               

               Cow position:
               chr16:46582771-46582985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               312-509
               

               Cow position:
               chr16:31375558-31375758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               318-509
               

               Cow position:
               chr16:52814781-52814967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               366-508
               

               Cow position:
               chr16:23807638-23807498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               366-508
               

               Cow position:
               chr16:42739753-42739899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 111
               

               Conread position:
               366-509
               

               Cow position:
               chr16:16273165-16273311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr16:49235480-49235627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               372-509
               

               Cow position:
               chr16:49256919-49257059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               373-509
               

               Cow position:
               chr16:29033378-29033241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               1-133
               

               Cow position:
               chr17:24029721-24029854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr17:13856492-13856626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr17:14894432-14894296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr17:40805096-40804960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr17:3642558-3642698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr17:11087446-11087586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr17:15850676-15850535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr17:18103408-18103547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               1-140
               

               Cow position:
               chr17:19269089-19269228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr17:25737941-25737801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr17:6260121-6259964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr17:12669798-12670023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               1-216
               

               Cow position:
               chr17:18300117-18300347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr17:19019850-19019626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               2-139
               

               Cow position:
               chr17:2579892-2579758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr17:35592494-35592333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               4-134
               

               Cow position:
               chr17:602163-602295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-139
               

               Cow position:
               chr17:20072969-20073103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               5-133
               

               Cow position:
               chr17:22132504-22132374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               8-140
               

               Cow position:
               chr17:27346071-27345936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               76-216
               

               Cow position:
               chr17:20402277-20402137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               214-508
               

               Cow position:
               chr17:42264916-42264604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               242-509
               

               Cow position:
               chr17:4082013-4081730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               243-437
               

               Cow position:
               chr17:152136-152336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               243-449
               

               Cow position:
               chr17:22557955-22557764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               243-465
               

               Cow position:
               chr17:18300447-18300667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               243-509
               

               Cow position:
               chr17:4295715-4295446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               243-509
               

               Cow position:
               chr17:20402034-20401763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               245-505
               

               Cow position:
               chr17:18193548-18193292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               276-509
               

               Cow position:
               chr17:6001688-6001916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               281-509
               

               Cow position:
               chr17:1658241-1658464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               157, 88
               

               Conread position:
               281-509
               

               Cow position:
               chr17:4672758-4672535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               175, 61
               

               Conread position:
               282-505
               

               Cow position:
               chr17:12670168-12670385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 40
               

               Conread position:
               366-505
               

               Cow position:
               chr17:15371295-15371153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               367-509
               

               Cow position:
               chr17:14325267-14325411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr18:33336351-33336224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               1-126
               

               Cow position:
               chr18:54023639-54023763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr18:27987550-27987424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr18:54171051-54171177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr18:24700626-24700759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr18:33269314-33269178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               1-139
               

               Cow position:
               chr18:14130877-14130740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr18:14416464-14416326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr18:23798132-23797998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr18:27837830-27837966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr18:36508819-36508683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr18:32652685-32652548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr18:37505547-37505409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr18:52651404-52651265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr18:25351235-25351078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr18:28973416-28973575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               2-139
               

               Cow position:
               chr18:41840339-41840474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-216
               

               Cow position:
               chr18:8169187-8168963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               3-112
               

               Cow position:
               chr18:2019199-2019307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-140
               

               Cow position:
               chr18:40478867-40478728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr18:17991937-17992067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               4-164
               

               Cow position:
               chr18:16534462-16534302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               8-203
               

               Cow position:
               chr18:54004000-54003809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 26
               

               Conread position:
               58-509
               

               Cow position:
               chr18:29237566-29237118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               111-216
               

               Cow position:
               chr18:51275565-51275669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               243-509
               

               Cow position:
               chr18:2886441-2886712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               247-377
               

               Cow position:
               chr18:29764901-29764764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               247-505
               

               Cow position:
               chr18:16842765-16843027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               270-509
               

               Cow position:
               chr18:35289871-35289626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               281-509
               

               Cow position:
               chr18:54270117-54269884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               282-508
               

               Cow position:
               chr18:16877998-16877779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               366-509
               

               Cow position:
               chr18:56462453-56462593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               369-509
               

               Cow position:
               chr18:29763816-29763675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               1-133
               

               Cow position:
               chr19:40851947-40852080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr19:2273895-2274025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr19:75762-75904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr19:28581170-28581306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr19:39185055-39185191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr19:5729320-5729179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr19:7488802-7488663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               1-140
               

               Cow position:
               chr19:33873917-33873776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-146
               

               Cow position:
               chr19:438950-439093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr19:893117-893267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr19:27052025-27052241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr19:39669019-39669244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               1-504
               

               Cow position:
               chr19:162610-163111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               347
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               117, 15
               

               Conread position:
               1-508
               

               Cow position:
               chr19:352162-352676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               352
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               1-509
               

               Cow position:
               chr19:136521-137042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               2-141
               

               Cow position:
               chr19:28376979-28376842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               2-509
               

               Cow position:
               chr19:263637-263117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               340
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               111, 5
               

               Conread position:
               3-132
               

               Cow position:
               chr19:40817216-40817344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 31
               

               Conread position:
               3-217
               

               Cow position:
               chr19:3138425-3138200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr19:417149-417018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               5-133
               

               Cow position:
               chr19:32666010-32665880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               5-139
               

               Cow position:
               chr19:39390995-39390863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               39-215
               

               Cow position:
               chr19:43469-43282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 159
               

               Conread position:
               106-209
               

               Cow position:
               chr19:44532831-44532729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               211-509
               

               Cow position:
               chr19:35377390-35377095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               243-508
               

               Cow position:
               chr19:20126362-20126101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               245-367
               

               Cow position:
               chr19:6554382-6554252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               318-509
               

               Cow position:
               chr19:42648612-42648800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               366-492
               

               Cow position:
               chr19:44532574-44532443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               366-505
               

               Cow position:
               chr19:32222989-32223130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 104
               

               Conread position:
               1-125
               

               Cow position:
               chr2:10268727-10268850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-133
               

               Cow position:
               chr2:4926243-4926376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr2:5870426-5870556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr2:24146792-24146659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-133
               

               Cow position:
               chr2:44991364-44991496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr2:65938519-65938650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr2:81256737-81256605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr2:5904931-5905066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               1-137
               

               Cow position:
               chr2:69584693-69584834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr2:10186302-10186436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr2:11159194-11159330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr2:12224381-12224517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr2:13045773-13045909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr2:50077532-50077393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr2:8118469-8118328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr2:16900182-16900041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr2:28650301-28650439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr2:50983296-50983437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr2:175600-175737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr2:198859-198996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr2:39421505-39421363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-155
               

               Cow position:
               chr2:28793185-28793038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr2:53329687-53329533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               1-160
               

               Cow position:
               chr2:52062600-52062441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-207
               

               Cow position:
               chr2:28642885-28643099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               1-214
               

               Cow position:
               chr2:1363093-1362870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr2:39622553-39622337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               135, 38
               

               Conread position:
               1-214
               

               Cow position:
               chr2:78742242-78742012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               1-216
               

               Cow position:
               chr2:5963149-5963380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               2-139
               

               Cow position:
               chr2:36980306-36980172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-203
               

               Cow position:
               chr2:7902946-7902742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-214
               

               Cow position:
               chr2:11729795-11729586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               107, 32
               

               Conread position:
               3-141
               

               Cow position:
               chr2:82167543-82167407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-161
               

               Cow position:
               chr2:2364116-2363957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-161
               

               Cow position:
               chr2:30381512-30381353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               4-140
               

               Cow position:
               chr2:422999-422859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-141
               

               Cow position:
               chr2:26869198-26869058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               5-139
               

               Cow position:
               chr2:282764-282895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               9-209
               

               Cow position:
               chr2:36030413-36030618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 25
               

               Conread position:
               16-216
               

               Cow position:
               chr2:28748064-28747863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               36-357
               

               Cow position:
               chr2:74390587-74390915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               79-216
               

               Cow position:
               chr2:781879-782024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 123
               

               Conread position:
               165-507
               

               Cow position:
               chr2:75675812-75676158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               242-509
               

               Cow position:
               chr2:201427-201699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 139
               

               Conread position:
               246-507
               

               Cow position:
               chr2:63292540-63292807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               271-507
               

               Cow position:
               chr2:73191948-73191706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               272-503
               

               Cow position:
               chr2:7211691-7211462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               281-458
               

               Cow position:
               chr2:42333289-42333470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               281-492
               

               Cow position:
               chr2:72596449-72596241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               166, 111
               

               Conread position:
               281-509
               

               Cow position:
               chr2:32389772-32389543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 193
               

               Conread position:
               297-458
               

               Cow position:
               chr2:29145715-29145878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               147, 25
               

               Conread position:
               342-508
               

               Cow position:
               chr2:74391179-74391348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               366-508
               

               Cow position:
               chr2:1672771-1672910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr2:24393272-24393413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               366-509
               

               Cow position:
               chr2:36053751-36053896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               373-507
               

               Cow position:
               chr2:15577677-15577813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               373-509
               

               Cow position:
               chr2:7902172-7902034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 66
               

               Conread position:
               1-133
               

               Cow position:
               chr20:3271150-3271019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               1-133
               

               Cow position:
               chr20:10845674-10845807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-134
               

               Cow position:
               chr20:21394042-21393905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               1-138
               

               Cow position:
               chr20:35124943-35124807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr20:5535383-5535249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-139
               

               Cow position:
               chr20:8003780-8003914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               1-139
               

               Cow position:
               chr20:12438313-12438449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr20:28161216-28161082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-139
               

               Cow position:
               chr20:28565146-28565284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               1-140
               

               Cow position:
               chr20:23799333-23799192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr20:25850544-25850684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr20:30684768-30684627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr20:18314865-18315002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-151
               

               Cow position:
               chr20:23469218-23469368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr20:21914775-21914616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-161
               

               Cow position:
               chr20:29948947-29948787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               2-129
               

               Cow position:
               chr20:15097430-15097555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr20:16179370-16179505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               3-198
               

               Cow position:
               chr20:8992778-8992985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               4-126
               

               Cow position:
               chr20:15946935-15947058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               4-126
               

               Cow position:
               chr20:42076616-42076738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               4-139
               

               Cow position:
               chr20:13763349-13763216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               107-509
               

               Cow position:
               chr20:22207218-22206807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 101
               

               Conread position:
               243-504
               

               Cow position:
               chr20:22717196-22717464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               281-445
               

               Cow position:
               chr20:8993135-8993299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 14
               

               Conread position:
               281-507
               

               Cow position:
               chr20:31378390-31378615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               366-509
               

               Cow position:
               chr20:18315197-18315336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr21:13313332-13313210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr21:46916147-46916018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               1-134
               

               Cow position:
               chr21:2416779-2416649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr21:2502457-2502323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               1-139
               

               Cow position:
               chr21:2883181-2883318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr21:4589426-4589564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               1-139
               

               Cow position:
               chr21:10850643-10850508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr21:27282953-27282816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr21:30599361-30599495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr21:35144323-35144187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr21:3779335-3779192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr21:10567235-10567094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr21:30562369-30562228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr21:40271114-40271255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr21:48116667-48116527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr21:21915253-21915110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               1-144
               

               Cow position:
               chr21:37371805-37371662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-151
               

               Cow position:
               chr21:146489-146339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-151
               

               Cow position:
               chr21:33252072-33251922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               1-185
               

               Cow position:
               chr21:2711064-2710881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               1-213
               

               Cow position:
               chr21:2540521-2540740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr21:27565961-27565737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               1-216
               

               Cow position:
               chr21:359928-359708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr21:9892499-9892287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               124, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr21:23861886-23861658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               1-244
               

               Cow position:
               chr21:6110126-6109871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-375
               

               Cow position:
               chr21:20743945-20744323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               2-129
               

               Cow position:
               chr21:28735795-28735669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               3-133
               

               Cow position:
               chr21:7266967-7267103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               3-140
               

               Cow position:
               chr21:34293581-34293441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               67-198
               

               Cow position:
               chr21:9870561-9870426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               314-509
               

               Cow position:
               chr21:36715204-36715018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               366-508
               

               Cow position:
               chr21:30226548-30226410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               368-509
               

               Cow position:
               chr21:23812406-23812265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               372-509
               

               Cow position:
               chr21:359559-359423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr22:12731282-12731391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr22:18815992-18816114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-126
               

               Cow position:
               chr22:326777-326901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               1-126
               

               Cow position:
               chr22:36533346-36533472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr22:5308494-5308362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr22:18027666-18027533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr22:560311-560447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr22:13773287-13773152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr22:17328346-17328481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr22:42991565-42991430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr22:44396836-44396700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr22:44934370-44934237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr22:1522404-1522264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr22:31334644-31334785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr22:34168724-34168584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr22:39469129-39469270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr22:537487-537346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr22:35671969-35672111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-155
               

               Cow position:
               chr22:19143298-19143451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr22:31313733-31313574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr22:11032139-11031926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               113, 14
               

               Conread position:
               1-215
               

               Cow position:
               chr22:44610289-44610080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr22:1322516-1322299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr22:35907001-35907225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               1-216
               

               Cow position:
               chr22:37132814-37132600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               1-218
               

               Cow position:
               chr22:6502743-6502971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               1-221
               

               Cow position:
               chr22:1269400-1269630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               2-131
               

               Cow position:
               chr22:48004926-48004797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-137
               

               Cow position:
               chr22:15851707-15851573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 37
               

               Conread position:
               2-217
               

               Cow position:
               chr22:13918221-13917998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               6-139
               

               Cow position:
               chr22:46853732-46853600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               7-201
               

               Cow position:
               chr22:310771-310573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               7-216
               

               Cow position:
               chr22:23854052-23853832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               11-216
               

               Cow position:
               chr22:44476254-44476044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               21-506
               

               Cow position:
               chr22:1282947-1283439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               214-449
               

               Cow position:
               chr22:33351669-33351439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               243-509
               

               Cow position:
               chr22:7278011-7277735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               282-476
               

               Cow position:
               chr22:308059-307861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               86, 96
               

               Conread position:
               289-506
               

               Cow position:
               chr22:36275755-36275546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               310-509
               

               Cow position:
               chr22:1048824-1048618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 130
               

               Conread position:
               366-509
               

               Cow position:
               chr22:11031323-11031177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               366-509
               

               Cow position:
               chr22:13917866-13917720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr22:23853692-23853547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               367-509
               

               Cow position:
               chr22:3306371-3306518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               373-509
               

               Cow position:
               chr22:6503322-6503460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr23:16616452-16616576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr23:25683647-25683774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr23:15177464-15177332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr23:28913786-28913654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               1-134
               

               Cow position:
               chr23:22146860-22146996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr23:29451923-29452060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr23:30635907-30636043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr23:2026725-2026866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr23:4889066-4888926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr23:19489935-19489795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr23:4434846-4434708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr23:20155822-20155962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr23:36030984-36031125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               1-155
               

               Cow position:
               chr23:2716782-2716636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr23:27399893-27399738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-161
               

               Cow position:
               chr23:2757988-2757828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-161
               

               Cow position:
               chr23:3014787-3014625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr23:22874934-22875141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr23:16615045-16615266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               2-133
               

               Cow position:
               chr23:2781821-2781953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               2-139
               

               Cow position:
               chr23:4510470-4510331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 37
               

               Conread position:
               2-139
               

               Cow position:
               chr23:11778881-11778746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-139
               

               Cow position:
               chr23:14965359-14965494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-161
               

               Cow position:
               chr23:5778694-5778853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               4-133
               

               Cow position:
               chr23:31594860-31594987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               5-133
               

               Cow position:
               chr23:2574924-2574796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               113, 29
               

               Conread position:
               243-507
               

               Cow position:
               chr23:4752470-4752206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               243-509
               

               Cow position:
               chr23:31650430-31650701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               246-500
               

               Cow position:
               chr23:22875196-22875460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               269-509
               

               Cow position:
               chr23:19331951-19332192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               278-508
               

               Cow position:
               chr23:2341140-2340908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               281-509
               

               Cow position:
               chr23:16615552-16615782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               167, 85
               

               Conread position:
               366-509
               

               Cow position:
               chr23:1327111-1327257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               373-509
               

               Cow position:
               chr23:1402528-1402667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr24:6434711-6434583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr24:12086679-12086542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr24:17696498-17696634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr24:29187763-29187627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr24:148139-148280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr24:4415050-4415190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr24:12335296-12335436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr24:37217492-37217353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr24:43814237-43814095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr24:12130496-12130652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-164
               

               Cow position:
               chr24:19833865-19833702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr24:14333943-14333732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               125, 10
               

               Conread position:
               1-215
               

               Cow position:
               chr24:38638021-38637792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               1-217
               

               Cow position:
               chr24:13302063-13302292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               1-229
               

               Cow position:
               chr24:6336329-6336088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               2-134
               

               Cow position:
               chr24:33933845-33933710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               2-142
               

               Cow position:
               chr24:12232496-12232637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               4-134
               

               Cow position:
               chr24:35838144-35838276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               5-112
               

               Cow position:
               chr24:14390085-14390190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               242-504
               

               Cow position:
               chr24:14333623-14333351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 191
               

               Conread position:
               243-508
               

               Cow position:
               chr24:13302413-13302683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               243-509
               

               Cow position:
               chr24:36708409-36708149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               245-509
               

               Cow position:
               chr24:16377081-16376823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 133
               

               Conread position:
               246-505
               

               Cow position:
               chr24:38004800-38005062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               246-509
               

               Cow position:
               chr24:17303047-17303313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 165
               

               Conread position:
               251-500
               

               Cow position:
               chr24:32332110-32331852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               276-504
               

               Cow position:
               chr24:40654911-40654691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               223, 19
               

               Conread position:
               281-509
               

               Cow position:
               chr24:7091069-7091291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               162, 14
               

               Conread position:
               282-509
               

               Cow position:
               chr24:1448087-1447857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               149, 61
               

               Conread position:
               295-509
               

               Cow position:
               chr24:12145420-12145634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               151, 41
               

               Conread position:
               342-509
               

               Cow position:
               chr24:38637078-38636908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               373-509
               

               Cow position:
               chr24:12797328-12797465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               378-509
               

               Cow position:
               chr24:36559651-36559784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr25:18274546-18274673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr25:24659689-24659557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr25:18889579-18889715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr25:34014051-34014188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr25:12942264-12942405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr25:33665245-33665385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               1-160
               

               Cow position:
               chr25:8675351-8675193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr25:13781466-13781307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               2-139
               

               Cow position:
               chr25:34346582-34346717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-216
               

               Cow position:
               chr25:18094633-18094413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               4-138
               

               Cow position:
               chr25:18027011-18027147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-161
               

               Cow position:
               chr25:18303834-18303676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               5-146
               

               Cow position:
               chr25:17560205-17560342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               95-501
               

               Cow position:
               chr25:33244481-33244079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               135, 22
               

               Conread position:
               217-504
               

               Cow position:
               chr25:18254808-18255108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               243-509
               

               Cow position:
               chr25:11932999-11933272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               245-509
               

               Cow position:
               chr25:18093537-18093269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               279-507
               

               Cow position:
               chr25:12759108-12759338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               167, 226
               

               Conread position:
               281-478
               

               Cow position:
               chr25:23344858-23345061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 185
               

               Conread position:
               1-130
               

               Cow position:
               chr26:12588115-12588245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr26:17396474-17396610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr26:19351057-19351193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr26:6848983-6849121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr26:30588916-30589074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-222
               

               Cow position:
               chr26:4333847-4334079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               3-134
               

               Cow position:
               chr26:23603053-23603189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               243-509
               

               Cow position:
               chr26:9849377-9849646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               243-509
               

               Cow position:
               chr26:9852888-9853157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               296-509
               

               Cow position:
               chr26:12666601-12666383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               6, 126
               

               Conread position:
               1-129
               

               Cow position:
               chr27:23335557-23335431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr27:1209745-1209614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr27:14460063-14460198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr27:893601-893460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr27:9992809-9992950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr27:15637977-15638117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               1-143
               

               Cow position:
               chr27:16034007-16034149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-202
               

               Cow position:
               chr27:26555274-26555480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               1-204
               

               Cow position:
               chr27:8568114-8567901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               3-133
               

               Cow position:
               chr27:15277677-15277812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               242-446
               

               Cow position:
               chr27:27196700-27196904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               243-476
               

               Cow position:
               chr27:26034573-26034812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               289-465
               

               Cow position:
               chr27:26228169-26227999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               158, 101
               

               Conread position:
               331-497
               

               Cow position:
               chr27:3995830-3996005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr28:782831-782697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr28:1167444-1167579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:1505303-1505166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:5113860-5113996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:5751267-5751403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:5937914-5937778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr28:7002428-7002292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:7740917-7740783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:10581547-10581682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:13460407-13460272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:17388921-17388784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:26425813-26425949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:32791942-32792078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:33252750-33252614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr28:34594416-34594281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               1-140
               

               Cow position:
               chr28:1814429-1814570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr28:5566583-5566442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr28:12150741-12150601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr28:12409790-12409928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr28:14705233-14705374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr28:17666860-17667000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr28:22260713-22260853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr28:22232968-22233110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr28:2084030-2083875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-182
               

               Cow position:
               chr28:10071720-10071532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               1-196
               

               Cow position:
               chr28:3020312-3020510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-201
               

               Cow position:
               chr28:2988805-2989013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               1-215
               

               Cow position:
               chr28:5798183-5797974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               1-216
               

               Cow position:
               chr28:5813447-5813224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr28:10497577-10497804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr28:10617393-10617607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr28:21359776-21359548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               3-140
               

               Cow position:
               chr28:29820170-29820031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               13-198
               

               Cow position:
               chr28:7789525-7789720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               33-145
               

               Cow position:
               chr28:2886719-2886607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-217
               

               Cow position:
               chr28:8720946-8721137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 86
               

               Conread position:
               273-504
               

               Cow position:
               chr28:6656828-6657060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               281-509
               

               Cow position:
               chr28:10462664-10462889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               164, 29
               

               Conread position:
               282-509
               

               Cow position:
               chr28:29092501-29092727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               300-507
               

               Cow position:
               chr28:2845706-2845911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               315-445
               

               Cow position:
               chr28:10647435-10647306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               320-509
               

               Cow position:
               chr28:2989255-2989444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               330-509
               

               Cow position:
               chr28:34649383-34649205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               355-509
               

               Cow position:
               chr28:11357298-11357452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               366-509
               

               Cow position:
               chr28:5797840-5797693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr28:10071386-10071241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               373-509
               

               Cow position:
               chr28:5813084-5812950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               375-509
               

               Cow position:
               chr28:5764644-5764508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               377-509
               

               Cow position:
               chr28:7789888-7790023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr29:19885467-19885338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr29:39079307-39079439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr29:2100249-2100113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               1-139
               

               Cow position:
               chr29:6266097-6266233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr29:10647847-10647983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr29:14586319-14586190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr29:19622844-19622979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr29:20251562-20251427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr29:32540212-32540078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               1-139
               

               Cow position:
               chr29:43322957-43322822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               1-140
               

               Cow position:
               chr29:2690304-2690163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr29:7430815-7430956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr29:10823565-10823706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr29:25932139-25932281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr29:26164419-26164559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr29:45586964-45587097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr29:2840973-2841128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               1-160
               

               Cow position:
               chr29:40502580-40502737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr29:105430-105207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr29:14085731-14085948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               2-133
               

               Cow position:
               chr29:42650668-42650536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-133
               

               Cow position:
               chr29:42802528-42802396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-139
               

               Cow position:
               chr29:48070-48212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               2-141
               

               Cow position:
               chr29:34799407-34799545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               2-160
               

               Cow position:
               chr29:410123-410280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               133, 32
               

               Conread position:
               2-216
               

               Cow position:
               chr29:31488430-31488197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 36
               

               Conread position:
               3-160
               

               Cow position:
               chr29:38227381-38227225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr29:21426629-21426759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               4-161
               

               Cow position:
               chr29:27040370-27040528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-161
               

               Cow position:
               chr29:35197066-35196908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               243-366
               

               Cow position:
               chr29:105044-104913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               246-509
               

               Cow position:
               chr29:24708769-24709022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               203, 11
               

               Conread position:
               247-509
               

               Cow position:
               chr29:802860-803129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               122, 97
               

               Conread position:
               253-507
               

               Cow position:
               chr29:15949705-15949962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               281-508
               

               Cow position:
               chr29:13649137-13648912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               165, 185
               

               Conread position:
               281-509
               

               Cow position:
               chr29:1715698-1715468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               342-509
               

               Cow position:
               chr29:5982810-5982980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr3:6878737-6878865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               118, 23
               

               Conread position:
               1-133
               

               Cow position:
               chr3:19944365-19944232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr3:72630390-72630259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr3:46502855-46502719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:7480911-7481046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr3:10239975-10239839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:18542086-18542222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:21182366-21182501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:23290021-23290156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr3:40823708-40823573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:48060509-48060646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:49137217-49137354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:59861687-59861552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:75040848-75040984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr3:78027089-78027224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 8
               

               Conread position:
               1-140
               

               Cow position:
               chr3:5953865-5954005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr3:18811821-18811681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-140
               

               Cow position:
               chr3:19756637-19756778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr3:49544889-49545026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr3:57484408-57484549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr3:64017047-64017184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-141
               

               Cow position:
               chr3:50915647-50915508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               134, 42
               

               Conread position:
               1-143
               

               Cow position:
               chr3:46860988-46861130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-145
               

               Cow position:
               chr3:49678113-49677971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr3:594898-594739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-161
               

               Cow position:
               chr3:29330956-29331115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-161
               

               Cow position:
               chr3:77424126-77423961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-162
               

               Cow position:
               chr3:56340105-56340266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 33
               

               Conread position:
               1-194
               

               Cow position:
               chr3:48230141-48230339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 23
               

               Conread position:
               1-210
               

               Cow position:
               chr3:15179020-15178812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 22
               

               Conread position:
               1-215
               

               Cow position:
               chr3:6686129-6685900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               1-215
               

               Cow position:
               chr3:52863815-52864039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               1-216
               

               Cow position:
               chr3:66991412-66991188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               1-217
               

               Cow position:
               chr3:24591006-24591220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-217
               

               Cow position:
               chr3:58947947-58947725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-509
               

               Cow position:
               chr3:64357522-64358024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               2-131
               

               Cow position:
               chr3:66620493-66620366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-140
               

               Cow position:
               chr3:36881600-36881741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-172
               

               Cow position:
               chr3:26822188-26822353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               2-196
               

               Cow position:
               chr3:32841705-32841900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               2-216
               

               Cow position:
               chr3:18356183-18356390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-249
               

               Cow position:
               chr3:38492960-38492710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               189, 21
               

               Conread position:
               3-126
               

               Cow position:
               chr3:55229380-55229504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               3-216
               

               Cow position:
               chr3:2907450-2907658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               4-133
               

               Cow position:
               chr3:41000428-41000298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               5-141
               

               Cow position:
               chr3:5995384-5995517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               17-133
               

               Cow position:
               chr3:3806634-3806516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               17-214
               

               Cow position:
               chr3:50127404-50127620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               34-216
               

               Cow position:
               chr3:46015930-46015748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               240-507
               

               Cow position:
               chr3:83294895-83295177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               243-449
               

               Cow position:
               chr3:36127793-36127578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               243-508
               

               Cow position:
               chr3:36098304-36098573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               243-509
               

               Cow position:
               chr3:4027690-4027417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 131
               

               Conread position:
               243-509
               

               Cow position:
               chr3:32842044-32842304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               245-509
               

               Cow position:
               chr3:14753880-14754152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 224
               

               Conread position:
               275-509
               

               Cow position:
               chr3:34093066-34093304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 77
               

               Conread position:
               281-462
               

               Cow position:
               chr3:5391353-5391172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 69
               

               Conread position:
               281-506
               

               Cow position:
               chr3:3980761-3980533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               281-507
               

               Cow position:
               chr3:45774725-45774951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               281-509
               

               Cow position:
               chr3:15178675-15178459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               283-509
               

               Cow position:
               chr3:26949868-26949657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               143, 99
               

               Conread position:
               288-505
               

               Cow position:
               chr3:42631381-42631162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 130
               

               Conread position:
               313-467
               

               Cow position:
               chr3:63241404-63241559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               366-508
               

               Cow position:
               chr3:52864179-52864323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               366-509
               

               Cow position:
               chr3:6685737-6685595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               366-509
               

               Cow position:
               chr3:19802939-19802796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 132
               

               Conread position:
               366-509
               

               Cow position:
               chr3:29595482-29595339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               366-509
               

               Cow position:
               chr3:48230715-48230860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               373-509
               

               Cow position:
               chr3:14632416-14632554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               374-509
               

               Cow position:
               chr3:39326998-39326862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               1-129
               

               Cow position:
               chr4:12241091-12241217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-129
               

               Cow position:
               chr4:44725211-44725084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr4:6490238-6490374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr4:26886735-26886870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr4:31669398-31669262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr4:33493951-33493815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr4:43319520-43319656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:356035-355895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:16360008-16359869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:17926128-17926269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:25599376-25599516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:36896494-36896353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:43881235-43881094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr4:45049172-45049313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr4:18517022-18516864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr4:48026523-48026364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-192
               

               Cow position:
               chr4:34184394-34184595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr4:28831466-28831252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr4:46664642-46664414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr4:60264038-60264257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               2-143
               

               Cow position:
               chr4:4416200-4416060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               128, 32
               

               Conread position:
               3-140
               

               Cow position:
               chr4:31565180-31565318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               4-140
               

               Cow position:
               chr4:47717482-47717621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               7-134
               

               Cow position:
               chr4:66926118-66925988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               12-215
               

               Cow position:
               chr4:14550103-14549892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               211-505
               

               Cow position:
               chr4:21565349-21565043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               243-497
               

               Cow position:
               chr4:27443792-27443534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               274-509
               

               Cow position:
               chr4:23493889-23493666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               171, 24
               

               Conread position:
               279-507
               

               Cow position:
               chr4:8597980-8598207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               147, 26
               

               Conread position:
               366-509
               

               Cow position:
               chr4:21337912-21338053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr4:60264473-60264618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               1-126
               

               Cow position:
               chr5:31101406-31101529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr5:27651760-27651896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr5:2914669-2914533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr5:6155000-6155136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr5:37732567-37732431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr5:49119059-49119196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr5:57482327-57482461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr5:415501-415642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr5:73489340-73489481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-141
               

               Cow position:
               chr5:46738358-46738497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr5:32772696-32772554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr5:47830899-47831041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-146
               

               Cow position:
               chr5:10919040-10918897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               1-151
               

               Cow position:
               chr5:3503884-3504033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr5:64781797-64781956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               140, 33
               

               Conread position:
               1-190
               

               Cow position:
               chr5:39246792-39246983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-213
               

               Cow position:
               chr5:25000002-25000227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr5:14785159-14785376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr5:41961724-41961936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr5:41528539-41528760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr5:61272328-61272555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-223
               

               Cow position:
               chr5:27058520-27058736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr5:55628206-55628048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-198
               

               Cow position:
               chr5:29435353-29435543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               3-140
               

               Cow position:
               chr5:25206463-25206604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr5:32946093-32945935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               3-210
               

               Cow position:
               chr5:26068094-26068309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               3-215
               

               Cow position:
               chr5:41357872-41358082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               4-133
               

               Cow position:
               chr5:20971829-20971958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               4-133
               

               Cow position:
               chr5:45700485-45700354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               4-133
               

               Cow position:
               chr5:52805657-52805526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-134
               

               Cow position:
               chr5:38842237-38842104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               4-164
               

               Cow position:
               chr5:9686208-9686369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               14-214
               

               Cow position:
               chr5:27002241-27002040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               241-509
               

               Cow position:
               chr5:7502585-7502867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               243-509
               

               Cow position:
               chr5:18117272-18117539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               243-509
               

               Cow position:
               chr5:25000331-25000602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               243-509
               

               Cow position:
               chr5:46630126-46630397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               245-464
               

               Cow position:
               chr5:27001941-27001715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               247-471
               

               Cow position:
               chr5:39247096-39247329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               247-509
               

               Cow position:
               chr5:27058813-27059080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               247-509
               

               Cow position:
               chr5:27059716-27059983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               267-507
               

               Cow position:
               chr5:27489538-27489293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 194
               

               Conread position:
               285-489
               

               Cow position:
               chr5:23755365-23755566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               300-509
               

               Cow position:
               chr5:14785541-14785757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               310-509
               

               Cow position:
               chr5:27682493-27682700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               366-509
               

               Cow position:
               chr5:49593266-49593411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               1-131
               

               Cow position:
               chr6:65821770-65821899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr6:40867199-40867331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr6:58027115-58026983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr6:26044884-26044745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               1-138
               

               Cow position:
               chr6:65928326-65928189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr6:5949418-5949552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr6:8202099-8201964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               1-139
               

               Cow position:
               chr6:29311854-29311718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr6:30274816-30274952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr6:34892643-34892779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr6:39437909-39437774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr6:914016-913875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr6:15140821-15140958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr6:17046416-17046277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr6:55543963-55544105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               1-141
               

               Cow position:
               chr6:52693386-52693244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-143
               

               Cow position:
               chr6:2375057-2374914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               1-146
               

               Cow position:
               chr6:1822271-1822414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               1-146
               

               Cow position:
               chr6:65841948-65841810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr6:20560750-20560899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr6:702313-702154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-160
               

               Cow position:
               chr6:47042836-47042995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-162
               

               Cow position:
               chr6:6566969-6566807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-172
               

               Cow position:
               chr6:25214617-25214455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr6:8021288-8021059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr6:10643909-10643688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr6:33994965-33995183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               2-129
               

               Cow position:
               chr6:64715591-64715466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-140
               

               Cow position:
               chr6:35876354-35876496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               2-155
               

               Cow position:
               chr6:36526410-36526263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-155
               

               Cow position:
               chr6:40554219-40554370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               2-201
               

               Cow position:
               chr6:35419493-35419676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               4-133
               

               Cow position:
               chr6:19454276-19454145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-161
               

               Cow position:
               chr6:33389203-33389044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               5-131
               

               Cow position:
               chr6:59918926-59919050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               5-140
               

               Cow position:
               chr6:3277594-3277728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               5-140
               

               Cow position:
               chr6:4508067-4508204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               12-214
               

               Cow position:
               chr6:2887518-2887315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               118-509
               

               Cow position:
               chr6:59740480-59740872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               214-505
               

               Cow position:
               chr6:8020751-8020460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               243-509
               

               Cow position:
               chr6:1100134-1100401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               243-509
               

               Cow position:
               chr6:7179239-7179508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 162
               

               Conread position:
               244-509
               

               Cow position:
               chr6:32330349-32330608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               281-509
               

               Cow position:
               chr6:52805431-52805214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               161, 43
               

               Conread position:
               344-509
               

               Cow position:
               chr6:35420256-35420421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               366-509
               

               Cow position:
               chr6:10641491-10641345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               368-509
               

               Cow position:
               chr6:38232606-38232463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 70
               

               Conread position:
               373-508
               

               Cow position:
               chr6:37116458-37116322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               1-126
               

               Cow position:
               chr7:21929593-21929470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr7:1610758-1610891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr7:67799303-67799171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr7:14139148-14139279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr7:1372195-1372335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr7:8144792-8144927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr7:13537131-13537267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr7:19924374-19924510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr7:21234559-21234695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-139
               

               Cow position:
               chr7:33405789-33405925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr7:34149551-34149415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr7:39792207-39792072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr7:46901628-46901764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr7:446181-446319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr7:21985854-21985711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr7:34486367-34486226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr7:54603304-54603163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-140
               

               Cow position:
               chr7:55537469-55537606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               1-140
               

               Cow position:
               chr7:68232390-68232252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               1-141
               

               Cow position:
               chr7:21127212-21127352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-143
               

               Cow position:
               chr7:11447003-11446860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               1-182
               

               Cow position:
               chr7:59683728-59683541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-194
               

               Cow position:
               chr7:20821159-20820964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               1-198
               

               Cow position:
               chr7:51014721-51014509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-213
               

               Cow position:
               chr7:48634885-48634660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr7:54644063-54644282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               117, 42
               

               Conread position:
               1-215
               

               Cow position:
               chr7:68908767-68908548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr7:55279892-55280101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr7:58994043-58993816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-217
               

               Cow position:
               chr7:4415828-4415597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               1-232
               

               Cow position:
               chr7:39107467-39107710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               2-139
               

               Cow position:
               chr7:45948700-45948835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               3-216
               

               Cow position:
               chr7:1734339-1734565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               4-103
               

               Cow position:
               chr7:38536847-38536749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-133
               

               Cow position:
               chr7:35296820-35296950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               4-216
               

               Cow position:
               chr7:29470908-29470696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               8-133
               

               Cow position:
               chr7:27787066-27786940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               8-216
               

               Cow position:
               chr7:29369848-29370040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               19-255
               

               Cow position:
               chr7:3155551-3155305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               26-215
               

               Cow position:
               chr7:49292040-49291853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               111, 145
               

               Conread position:
               65-216
               

               Cow position:
               chr7:6488079-6488232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               190-506
               

               Cow position:
               chr7:55280211-55280526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               211-508
               

               Cow position:
               chr7:35286995-35287283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               243-448
               

               Cow position:
               chr7:27560430-27560638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               243-505
               

               Cow position:
               chr7:39555548-39555816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               243-509
               

               Cow position:
               chr7:1399821-1400083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               245-509
               

               Cow position:
               chr7:47051233-47050959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               269-509
               

               Cow position:
               chr7:49291174-49290937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               281-430
               

               Cow position:
               chr7:63960975-63961119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               281-509
               

               Cow position:
               chr7:59136916-59136678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               302-503
               

               Cow position:
               chr7:68478928-68478723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               305-509
               

               Cow position:
               chr7:63021322-63021121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               140, 120
               

               Conread position:
               311-509
               

               Cow position:
               chr7:6488862-6489062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               334-508
               

               Cow position:
               chr7:63550250-63550425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               345-509
               

               Cow position:
               chr7:68557679-68557517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               366-509
               

               Cow position:
               chr7:29470540-29470397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               372-509
               

               Cow position:
               chr7:51014356-51014221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               375-509
               

               Cow position:
               chr7:54195839-54195981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               379-508
               

               Cow position:
               chr7:53991154-53991029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               1-128
               

               Cow position:
               chr8:47661685-47661811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-129
               

               Cow position:
               chr8:33589014-33588888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-131
               

               Cow position:
               chr8:33431040-33430910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr8:46944279-46944412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               1-134
               

               Cow position:
               chr8:7161531-7161401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr8:8229141-8229277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr8:11802460-11802324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-136
               

               Cow position:
               chr8:42419797-42419930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr8:3856375-3856512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr8:5016821-5016685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr8:19051116-19050976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr8:36635905-36636040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr8:38391006-38390872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr8:39195577-39195713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr8:42484552-42484416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:10742991-10743131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:11832337-11832199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               1-140
               

               Cow position:
               chr8:23771274-23771134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:24915702-24915838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:25408363-25408228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-140
               

               Cow position:
               chr8:25523039-25522898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:44243934-44244074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:51667655-51667796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               1-140
               

               Cow position:
               chr8:59262255-59262394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr8:60061017-60060879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               1-148
               

               Cow position:
               chr8:4687035-4686891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-155
               

               Cow position:
               chr8:8911145-8910994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr8:12449587-12449429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-160
               

               Cow position:
               chr8:25776033-25776192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-196
               

               Cow position:
               chr8:61034379-61034586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               1-213
               

               Cow position:
               chr8:45160435-45160632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               188, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr8:12542811-12543011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               206, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr8:11969644-11969855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               1-216
               

               Cow position:
               chr8:24419567-24419783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chr8:58186574-58186784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               1-217
               

               Cow position:
               chr8:38606559-38606784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-238
               

               Cow position:
               chr8:47673791-47673556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               199, 31
               

               Conread position:
               1-506
               

               Cow position:
               chr8:12717607-12717070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               2-140
               

               Cow position:
               chr8:19330374-19330235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               2-222
               

               Cow position:
               chr8:42160779-42161005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               4-133
               

               Cow position:
               chr8:45316465-45316594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-140
               

               Cow position:
               chr8:27925954-27925814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               6-219
               

               Cow position:
               chr8:19188860-19188647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               7-139
               

               Cow position:
               chr8:32318915-32319045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               7-216
               

               Cow position:
               chr8:45692525-45692731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               13-215
               

               Cow position:
               chr8:42468363-42468158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               45-509
               

               Cow position:
               chr8:16084251-16083790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               70-213
               

               Cow position:
               chr8:44694165-44694022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               208-469
               

               Cow position:
               chr8:46419393-46419114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 241
               

               Conread position:
               211-471
               

               Cow position:
               chr8:12543293-12543550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               243-439
               

               Cow position:
               chr8:44106233-44106035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               243-509
               

               Cow position:
               chr8:42468057-42467787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               243-509
               

               Cow position:
               chr8:45692884-45693166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               244-509
               

               Cow position:
               chr8:25543239-25542963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               265-445
               

               Cow position:
               chr8:55438318-55438490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               281-399
               

               Cow position:
               chr8:13736175-13736057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-509
               

               Cow position:
               chr8:47673165-47672934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               298-503
               

               Cow position:
               chr8:47491154-47491364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               303-492
               

               Cow position:
               chr8:23765734-23765927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               366-506
               

               Cow position:
               chr8:11969991-11970125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               366-508
               

               Cow position:
               chr8:44693889-44693749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               373-504
               

               Cow position:
               chr8:24419937-24420070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               373-507
               

               Cow position:
               chr8:38606926-38607058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               373-508
               

               Cow position:
               chr8:45160773-45160910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               1-129
               

               Cow position:
               chr9:47002481-47002355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-131
               

               Cow position:
               chr9:2487845-2487974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr9:1995623-1995755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-133
               

               Cow position:
               chr9:42309973-42309842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-134
               

               Cow position:
               chr9:9013390-9013259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr9:16176059-16175923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chr9:18509511-18509647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr9:22653858-22653718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               1-139
               

               Cow position:
               chr9:29027912-29028045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr9:60277731-60277866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               1-140
               

               Cow position:
               chr9:2171349-2171209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr9:4532783-4532642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr9:6830220-6830358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               1-140
               

               Cow position:
               chr9:37970919-37971059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chr9:59173868-59174009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr9:9705853-9705713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-145
               

               Cow position:
               chr9:28022089-28021946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-146
               

               Cow position:
               chr9:42569192-42569051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr9:30672658-30672501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-160
               

               Cow position:
               chr9:51181898-51182061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               1-168
               

               Cow position:
               chr9:20308856-20309024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-194
               

               Cow position:
               chr9:64119520-64119315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               1-202
               

               Cow position:
               chr9:13476595-13476813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               1-206
               

               Cow position:
               chr9:3803629-3803415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-207
               

               Cow position:
               chr9:59426060-59425840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-208
               

               Cow position:
               chr9:27034971-27034764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-214
               

               Cow position:
               chr9:28688392-28688157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-509
               

               Cow position:
               chr9:44818468-44817974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               2-139
               

               Cow position:
               chr9:7003073-7002938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-140
               

               Cow position:
               chr9:7061804-7061941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               3-216
               

               Cow position:
               chr9:3354398-3354616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               4-161
               

               Cow position:
               chr9:3156310-3156155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-161
               

               Cow position:
               chr9:37129259-37129413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               4-214
               

               Cow position:
               chr9:2000713-2000939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               6-140
               

               Cow position:
               chr9:5004278-5004150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-126
               

               Cow position:
               chr9:9985676-9985558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               15-161
               

               Cow position:
               chr9:31021100-31020954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               70-216
               

               Cow position:
               chr9:44795294-44795138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               206-509
               

               Cow position:
               chr9:6110567-6110882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               211-509
               

               Cow position:
               chr9:64119247-64118933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 209
               

               Conread position:
               242-507
               

               Cow position:
               chr9:26710104-26710376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               244-509
               

               Cow position:
               chr9:3355613-3355877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               245-508
               

               Cow position:
               chr9:6974512-6974245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               245-509
               

               Cow position:
               chr9:20309152-20309416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               248-501
               

               Cow position:
               chr9:2001053-2001303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               249-509
               

               Cow position:
               chr9:13222706-13222448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               270-509
               

               Cow position:
               chr9:2053011-2052771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               274-509
               

               Cow position:
               chr9:1635894-1635657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               275-455
               

               Cow position:
               chr9:43663266-43663084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               168, 150
               

               Conread position:
               281-509
               

               Cow position:
               chr9:39993257-39993032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               164, 44
               

               Conread position:
               282-445
               

               Cow position:
               chr9:15685110-15684947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               282-508
               

               Cow position:
               chr9:3578169-3578385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               333-479
               

               Cow position:
               chr9:4985144-4984996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               350-509
               

               Cow position:
               chr9:44794734-44794578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               366-509
               

               Cow position:
               chr9:13476961-13477107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-129
               

               Cow position:
               chrX:2482439-2482565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-129
               

               Cow position:
               chrX:29096399-29096273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-131
               

               Cow position:
               chrX:27426129-27426258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chrX:18954327-18954463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-139
               

               Cow position:
               chrX:21829722-21829586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-139
               

               Cow position:
               chrX:26528173-26528038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-140
               

               Cow position:
               chrX:15599127-15598987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chrX:22488379-22488238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               1-140
               

               Cow position:
               chrX:23040929-23041066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chrX:23277217-23277077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chrX:26758409-26758548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chrX:29853371-29853508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-140
               

               Cow position:
               chrX:30231911-30232051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               1-141
               

               Cow position:
               chrX:26767001-26767142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               1-143
               

               Cow position:
               chrX:2102050-2101908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chrX:12343147-12343005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chrX:21490388-21490247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chrX:28634225-28634367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-143
               

               Cow position:
               chrX:30055544-30055687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-143
               

               Cow position:
               chrX:39563740-39563882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               1-160
               

               Cow position:
               chrX:970966-970806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 32
               

               Conread position:
               1-160
               

               Cow position:
               chrX:23391401-23391560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-192
               

               Cow position:
               chrX:29285636-29285445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-210
               

               Cow position:
               chrX:44387319-44387101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-215
               

               Cow position:
               chrX:13053218-13053008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               1-216
               

               Cow position:
               chrX:17667701-17667922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               1-216
               

               Cow position:
               chrX:18534670-18534463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-216
               

               Cow position:
               chrX:40246683-40246905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               1-252
               

               Cow position:
               chrX:6282554-6282815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               2-139
               

               Cow position:
               chrX:15127046-15127180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               2-147
               

               Cow position:
               chrX:13412942-13413084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               2-214
               

               Cow position:
               chrX:31082164-31081938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               3-139
               

               Cow position:
               chrX:16699496-16699362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               3-161
               

               Cow position:
               chrX:21632388-21632549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               3-161
               

               Cow position:
               chrX:26627835-26627994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               4-133
               

               Cow position:
               chrX:24136209-24136340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               4-141
               

               Cow position:
               chrX:20804324-20804183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               4-161
               

               Cow position:
               chrX:21289295-21289453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               7-141
               

               Cow position:
               chrX:28603266-28603403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               9-160
               

               Cow position:
               chrX:32467441-32467291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               127-509
               

               Cow position:
               chrX:20697890-20698278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               238-392
               

               Cow position:
               chrX:18611230-18611082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               242-509
               

               Cow position:
               chrX:2143569-2143301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 14
               

               Conread position:
               243-506
               

               Cow position:
               chrX:5840602-5840356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               243-506
               

               Cow position:
               chrX:28550158-28549889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 236
               

               Conread position:
               243-509
               

               Cow position:
               chrX:12972934-12973209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               243-509
               

               Cow position:
               chrX:17668009-17668281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 140
               

               Conread position:
               243-509
               

               Cow position:
               chrX:22130392-22130649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               245-509
               

               Cow position:
               chrX:40247031-40247295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               246-443
               

               Cow position:
               chrX:34991785-34991590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               281-504
               

               Cow position:
               chrX:37758207-37757989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               281-509
               

               Cow position:
               chrX:21269946-21270175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               281-509
               

               Cow position:
               chrX:30368765-30368997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               109, 185
               

               Conread position:
               310-509
               

               Cow position:
               chrX:24138803-24139007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               318-507
               

               Cow position:
               chrX:13052835-13052650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               320-509
               

               Cow position:
               chrX:18533201-18533011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               125, 92
               

               Conread position:
               338-509
               

               Cow position:
               chrX:16016937-16017104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               366-508
               

               Cow position:
               chrX:31725192-31725048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
Conread position:	1-126
Cow position:	chr1:85792123-85791999 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	96
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	33, 0
Conread position:	1-129
Cow position:	chr1:58336278-58336152 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	103
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	33, 0
Conread position:	1-134
Cow position:	chr1:76545098-76545226 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	108
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	118, 33
Conread position:	1-136
Cow position:	chr1:79636495-79636627 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	108
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	117, 32
Conread position:	1-139
Cow position:	chr1:12061772-12061906 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	111
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	118, 32
Conread position:	1-140
Cow position:	chr1:3385578-3385718 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	114
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	118, 33
Conread position:	1-143
Cow position:	chr1:30283106-30283248 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	108
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	129, 33
Conread position:	1-146
Cow position:	chr1:63605336-63605479 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	120
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	40, 32
Conread position:	1-151
Cow position:	chr1:72981710-72981560 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	115
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	118, 32
Conread position:	1-160
Cow position:	chr1:8825492-8825334 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	121
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	118, 22
Conread position:	1-161
Cow position:	chr1:102549679-102549518 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	120
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	110, 33
Conread position:	1-208
Cow position:	chr1:86610275-86610059 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	161
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	119, 33
Conread position:	1-215
Cow position:	chr1:38386910-38387126 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	170
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	46, 14
Conread position:	1-216
Cow position:	chr1:21720653-21720430 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	168
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	120, 6
Conread position:	1-507
Cow position:	chr1:40512605-40513112 (view UCSC Genome Browser custom track)
Alignm length:	524
Alignm identity:	355
Alignm E-value:	0
Alignm gaps (pig, cow):	117, 10
Conread position:	1-508
Cow position:	chr1:72137445-72136907 (view UCSC Genome Browser custom track)
Alignm length:	551
Alignm identity:	399
Alignm E-value:	0
Alignm gaps (pig, cow):	46, 33
Conread position:	2-134
Cow position:	chr1:65386768-65386640 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	108
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	117, 31
Conread position:	2-139
Cow position:	chr1:56143895-56144031 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	106
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	117, 32
Conread position:	2-140
Cow position:	chr1:79456531-79456670 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	110
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	125, 32
Conread position:	2-215
Cow position:	chr1:22344359-22344151 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	152
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	116, 32