Non-Coding RNA Search

Cow genome map


           Conread name:
           rrec30_n1.y1
        

               Conread position:
               1-148
               

               Cow position:
               chr1:85400543-85400699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:3018352-3018507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               1-158
               

               Cow position:
               chr1:53780730-53780570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr1:64972982-64972801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               1-209
               

               Cow position:
               chr1:33442615-33442833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 105
               

               Conread position:
               1-213
               

               Cow position:
               chr1:69286836-69287055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               1-217
               

               Cow position:
               chr1:85838414-85838203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               1-219
               

               Cow position:
               chr1:41515492-41515728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               1-225
               

               Cow position:
               chr1:59013822-59014048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               1-227
               

               Cow position:
               chr1:42875085-42875313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               1-228
               

               Cow position:
               chr1:89089962-89090195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr1:95456926-95456694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               1-231
               

               Cow position:
               chr1:16973548-16973773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-262
               

               Cow position:
               chr1:77657114-77656855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               1-283
               

               Cow position:
               chr1:57743667-57743950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               1-284
               

               Cow position:
               chr1:4277223-4276948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-284
               

               Cow position:
               chr1:25119711-25119988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               1-284
               

               Cow position:
               chr1:41093553-41093839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               49, 241
               

               Conread position:
               1-284
               

               Cow position:
               chr1:76860452-76860731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 169
               

               Conread position:
               1-284
               

               Cow position:
               chr1:81765834-81766110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               1-284
               

               Cow position:
               chr1:81925611-81925890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               1-284
               

               Cow position:
               chr1:89263034-89263322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 240
               

               Conread position:
               2-202
               

               Cow position:
               chr1:87242138-87241941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               2-284
               

               Cow position:
               chr1:72997543-72997261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               55, 193
               

               Conread position:
               3-262
               

               Cow position:
               chr1:95765811-95766068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               3-276
               

               Cow position:
               chr1:85529850-85530117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 180
               

               Conread position:
               4-172
               

               Cow position:
               chr1:3376482-3376312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-219
               

               Cow position:
               chr1:71976942-71976726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               131, 27
               

               Conread position:
               4-219
               

               Cow position:
               chr1:71978455-71978239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               131, 27
               

               Conread position:
               4-228
               

               Cow position:
               chr1:57246669-57246438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               70, 109
               

               Conread position:
               4-278
               

               Cow position:
               chr1:54390560-54390828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               4-284
               

               Cow position:
               chr1:50618708-50618986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               5-244
               

               Cow position:
               chr1:60567095-60566854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               10-276
               

               Cow position:
               chr1:56857394-56857133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 132
               

               Conread position:
               12-170
               

               Cow position:
               chr1:58515563-58515400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               12-282
               

               Cow position:
               chr1:76670244-76670510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               13-278
               

               Cow position:
               chr1:7790249-7790507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               177, 123
               

               Conread position:
               20-276
               

               Cow position:
               chr1:51875263-51875517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               25, 203
               

               Conread position:
               29-283
               

               Cow position:
               chr1:65734482-65734719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               32-276
               

               Cow position:
               chr1:15368096-15368339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               43-275
               

               Cow position:
               chr1:88563392-88563614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               160, 42
               

               Conread position:
               50-278
               

               Cow position:
               chr1:25780922-25780693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 127
               

               Conread position:
               50-284
               

               Cow position:
               chr1:76847801-76848032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               51-278
               

               Cow position:
               chr1:76304117-76304343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               62-284
               

               Cow position:
               chr1:7491318-7491120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               69-284
               

               Cow position:
               chr1:61536223-61536426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               69-284
               

               Cow position:
               chr1:62141442-62141652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               1-111
               

               Cow position:
               chr10:14650913-14651025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               1-134
               

               Cow position:
               chr10:30466632-30466771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr10:57523457-57523312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr10:44291733-44291894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr10:7652366-7652148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               140, 157
               

               Conread position:
               1-225
               

               Cow position:
               chr10:42320569-42320793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               1-228
               

               Cow position:
               chr10:10721662-10721884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               133, 58
               

               Conread position:
               1-228
               

               Cow position:
               chr10:34904847-34904617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               1-228
               

               Cow position:
               chr10:44765280-44765055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               138, 45
               

               Conread position:
               1-239
               

               Cow position:
               chr10:29185037-29184792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               1-247
               

               Cow position:
               chr10:32394982-32394726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-262
               

               Cow position:
               chr10:9154805-9155059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               1-263
               

               Cow position:
               chr10:39875844-39876115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 243
               

               Conread position:
               1-263
               

               Cow position:
               chr10:60206725-60206471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               139, 41
               

               Conread position:
               1-278
               

               Cow position:
               chr10:28935755-28935481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               1-282
               

               Cow position:
               chr10:1434719-1434446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               66, 168
               

               Conread position:
               1-282
               

               Cow position:
               chr10:29069399-29069120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               1-284
               

               Cow position:
               chr10:18389853-18390136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 190
               

               Conread position:
               2-229
               

               Cow position:
               chr10:26693296-26693080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               2-261
               

               Cow position:
               chr10:924510-924771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 55
               

               Conread position:
               2-266
               

               Cow position:
               chr10:26671511-26671271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 48
               

               Conread position:
               2-276
               

               Cow position:
               chr10:4343569-4343849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 224
               

               Conread position:
               2-284
               

               Cow position:
               chr10:14936933-14937229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               55, 208
               

               Conread position:
               2-284
               

               Cow position:
               chr10:68095472-68095753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 153
               

               Conread position:
               3-263
               

               Cow position:
               chr10:47591170-47591437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               43, 113
               

               Conread position:
               3-282
               

               Cow position:
               chr10:48824136-48823855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               64, 232
               

               Conread position:
               3-284
               

               Cow position:
               chr10:24129151-24128856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 239
               

               Conread position:
               4-180
               

               Cow position:
               chr10:4558486-4558669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               4-284
               

               Cow position:
               chr10:48162566-48162290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 165
               

               Conread position:
               4-284
               

               Cow position:
               chr10:65301494-65301213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               10-218
               

               Cow position:
               chr10:63075613-63075818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               133, 41
               

               Conread position:
               10-276
               

               Cow position:
               chr10:14730378-14730629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               11-233
               

               Cow position:
               chr10:68275646-68275864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               132, 34
               

               Conread position:
               41-284
               

               Cow position:
               chr10:65733935-65733691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               100-284
               

               Cow position:
               chr10:56376857-56377041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               1-175
               

               Cow position:
               chr11:74191898-74192073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               1-188
               

               Cow position:
               chr11:70716045-70716242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               1-199
               

               Cow position:
               chr11:54361234-54361030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr11:81337673-81337880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               1-218
               

               Cow position:
               chr11:28394310-28394085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 206
               

               Conread position:
               1-219
               

               Cow position:
               chr11:46777061-46777282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 164
               

               Conread position:
               1-220
               

               Cow position:
               chr11:46583175-46583399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr11:49037183-49037404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               139, 46
               

               Conread position:
               1-233
               

               Cow position:
               chr11:58211156-58211400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-262
               

               Cow position:
               chr11:44131602-44131335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               1-273
               

               Cow position:
               chr11:53855764-53855501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 145
               

               Conread position:
               1-275
               

               Cow position:
               chr11:75354444-75354171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               55, 215
               

               Conread position:
               1-276
               

               Cow position:
               chr11:3681615-3681880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               1-276
               

               Cow position:
               chr11:27055480-27055752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               1-278
               

               Cow position:
               chr11:53307667-53307938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               1-282
               

               Cow position:
               chr11:48484837-48485118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 225
               

               Conread position:
               1-283
               

               Cow position:
               chr11:80471699-80472000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 244
               

               Conread position:
               1-284
               

               Cow position:
               chr11:37727326-37727039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               1-284
               

               Cow position:
               chr11:51423191-51423479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               1-284
               

               Cow position:
               chr11:57753985-57754264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 46
               

               Conread position:
               2-171
               

               Cow position:
               chr11:15883641-15883818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               2-231
               

               Cow position:
               chr11:9295620-9295853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               2-276
               

               Cow position:
               chr11:30790551-30790838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               43, 245
               

               Conread position:
               2-281
               

               Cow position:
               chr11:27074075-27074354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               3-284
               

               Cow position:
               chr11:19490782-19490495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               4-180
               

               Cow position:
               chr11:17200937-17201119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-188
               

               Cow position:
               chr11:4246674-4246486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               4-217
               

               Cow position:
               chr11:2721035-2721256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               4-255
               

               Cow position:
               chr11:36765729-36765484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               4-273
               

               Cow position:
               chr11:51289795-51289524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 186
               

               Conread position:
               4-284
               

               Cow position:
               chr11:4865127-4865400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               6-284
               

               Cow position:
               chr11:77776822-77777099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 232
               

               Conread position:
               10-273
               

               Cow position:
               chr11:43996864-43997130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               47, 192
               

               Conread position:
               13-219
               

               Cow position:
               chr11:15942097-15942304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               47-262
               

               Cow position:
               chr11:2069543-2069320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 187
               

               Conread position:
               50-270
               

               Cow position:
               chr11:32016387-32016599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               143-284
               

               Cow position:
               chr11:62041506-62041369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               158-284
               

               Cow position:
               chr11:39484343-39484221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               1-271
               

               Cow position:
               chr12:4717770-4717505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               1-273
               

               Cow position:
               chr12:19713938-19714208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               1-283
               

               Cow position:
               chr12:28840330-28840047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               48, 235
               

               Conread position:
               1-284
               

               Cow position:
               chr12:21130547-21130264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               2-211
               

               Cow position:
               chr12:1487575-1487789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 204
               

               Conread position:
               2-246
               

               Cow position:
               chr12:17663470-17663229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               3-172
               

               Cow position:
               chr12:21723634-21723456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               4-134
               

               Cow position:
               chr12:22214173-22214303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               4-284
               

               Cow position:
               chr12:14852743-14853024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 169
               

               Conread position:
               10-185
               

               Cow position:
               chr12:747510-747330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 154
               

               Conread position:
               10-219
               

               Cow position:
               chr12:13260153-13259936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               13-244
               

               Cow position:
               chr12:6441337-6441570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               69-284
               

               Cow position:
               chr12:35111443-35111228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 143
               

               Conread position:
               74-278
               

               Cow position:
               chr12:7869319-7869120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               1-154
               

               Cow position:
               chr13:49355255-49355096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr13:46997468-46997659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr13:60219406-60219186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               1-230
               

               Cow position:
               chr13:42896227-42895998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 56
               

               Conread position:
               1-255
               

               Cow position:
               chr13:31638474-31638724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               1-261
               

               Cow position:
               chr13:34089634-34089377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               1-270
               

               Cow position:
               chr13:51184621-51184352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               1-270
               

               Cow position:
               chr13:55406010-55405744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               1-272
               

               Cow position:
               chr13:23266519-23266788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 204
               

               Conread position:
               1-276
               

               Cow position:
               chr13:1882201-1882474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 116
               

               Conread position:
               1-278
               

               Cow position:
               chr13:18945217-18945499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 230
               

               Conread position:
               1-284
               

               Cow position:
               chr13:5717382-5717661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               1-284
               

               Cow position:
               chr13:6601973-6601705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               1-284
               

               Cow position:
               chr13:19289934-19290217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               49, 161
               

               Conread position:
               1-284
               

               Cow position:
               chr13:26986605-26986883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               1-284
               

               Cow position:
               chr13:37544447-37544174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               1-284
               

               Cow position:
               chr13:45002403-45002681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               50, 37
               

               Conread position:
               1-284
               

               Cow position:
               chr13:61072081-61072366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               3-180
               

               Cow position:
               chr13:26073604-26073786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               10-284
               

               Cow position:
               chr13:55604222-55604498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               34, 181
               

               Conread position:
               22-228
               

               Cow position:
               chr13:17456390-17456180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               107-272
               

               Cow position:
               chr13:25891561-25891406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr14:21737063-21736891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr14:35001191-35000991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               73, 104
               

               Conread position:
               1-228
               

               Cow position:
               chr14:46085188-46084956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 213
               

               Conread position:
               1-231
               

               Cow position:
               chr14:42259648-42259411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               1-232
               

               Cow position:
               chr14:31400319-31400541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               1-261
               

               Cow position:
               chr14:19028237-19027976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               1-270
               

               Cow position:
               chr14:12951298-12951034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 212
               

               Conread position:
               1-273
               

               Cow position:
               chr14:48707373-48707112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 167
               

               Conread position:
               1-276
               

               Cow position:
               chr14:35292950-35292666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               76, 243
               

               Conread position:
               1-278
               

               Cow position:
               chr14:29568917-29569175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               139, 31
               

               Conread position:
               1-284
               

               Cow position:
               chr14:11564713-11564434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               1-284
               

               Cow position:
               chr14:38741552-38741837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               1-284
               

               Cow position:
               chr14:49219516-49219231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               2-273
               

               Cow position:
               chr14:9509174-9509437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               138, 207
               

               Conread position:
               4-273
               

               Cow position:
               chr14:19459692-19459967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 183
               

               Conread position:
               11-263
               

               Cow position:
               chr14:34055651-34055413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               11-284
               

               Cow position:
               chr14:45848330-45848056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               13-284
               

               Cow position:
               chr14:25430821-25430549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 213
               

               Conread position:
               20-228
               

               Cow position:
               chr14:45292144-45291938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               20-278
               

               Cow position:
               chr14:47660931-47661172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               22-284
               

               Cow position:
               chr14:45192681-45192424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               70-276
               

               Cow position:
               chr14:21672196-21672401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 25
               

               Conread position:
               1-149
               

               Cow position:
               chr15:23057375-23057528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr15:33747961-33747775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               1-217
               

               Cow position:
               chr15:39630399-39630618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               1-220
               

               Cow position:
               chr15:40171187-40171411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               1-225
               

               Cow position:
               chr15:7553803-7553566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 235
               

               Conread position:
               1-228
               

               Cow position:
               chr15:22095885-22096113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 55
               

               Conread position:
               1-228
               

               Cow position:
               chr15:40344063-40344291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 191
               

               Conread position:
               1-231
               

               Cow position:
               chr15:6588748-6588984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr15:35416774-35416538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 101
               

               Conread position:
               1-236
               

               Cow position:
               chr15:28071253-28071492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-278
               

               Cow position:
               chr15:40821312-40821035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 185
               

               Conread position:
               1-284
               

               Cow position:
               chr15:15865418-15865137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 204
               

               Conread position:
               1-284
               

               Cow position:
               chr15:37769887-37770161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               1-284
               

               Cow position:
               chr15:41785527-41785811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 109
               

               Conread position:
               2-200
               

               Cow position:
               chr15:13855789-13855588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               2-282
               

               Cow position:
               chr15:9735545-9735822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               3-233
               

               Cow position:
               chr15:52867813-52867579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               17-271
               

               Cow position:
               chr15:13981218-13981470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               22-284
               

               Cow position:
               chr15:53186334-53186070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 137
               

               Conread position:
               24-276
               

               Cow position:
               chr15:48842218-48842483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               32-274
               

               Cow position:
               chr15:32877162-32876933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               109-284
               

               Cow position:
               chr15:53148867-53149031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               115-284
               

               Cow position:
               chr15:53013534-53013699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               1-202
               

               Cow position:
               chr16:825311-825105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr16:24876120-24876339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               1-223
               

               Cow position:
               chr16:41160109-41159886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 190
               

               Conread position:
               1-225
               

               Cow position:
               chr16:42074054-42074288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               44, 231
               

               Conread position:
               1-226
               

               Cow position:
               chr16:1957887-1958119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 205
               

               Conread position:
               1-228
               

               Cow position:
               chr16:6389817-6390050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr16:2724385-2724621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr16:44676193-44675956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr16:22108599-22108828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               1-237
               

               Cow position:
               chr16:25174073-25173836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               1-269
               

               Cow position:
               chr16:44704452-44704185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               62, 185
               

               Conread position:
               1-274
               

               Cow position:
               chr16:25893344-25893073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 223
               

               Conread position:
               1-278
               

               Cow position:
               chr16:23317269-23317543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               59, 109
               

               Conread position:
               4-284
               

               Cow position:
               chr16:25743530-25743258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               10-284
               

               Cow position:
               chr16:42733462-42733730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               19-171
               

               Cow position:
               chr16:20595260-20595111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               30-284
               

               Cow position:
               chr16:44219411-44219170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               43-276
               

               Cow position:
               chr16:5632220-5632446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               60-284
               

               Cow position:
               chr16:42711145-42711358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               67-284
               

               Cow position:
               chr16:5163887-5164100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               77, 169
               

               Conread position:
               95-284
               

               Cow position:
               chr16:9025457-9025271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               99-284
               

               Cow position:
               chr16:47476709-47476527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               1-138
               

               Cow position:
               chr17:13716905-13717037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr17:20078280-20078501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-280
               

               Cow position:
               chr17:10843672-10843379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 239
               

               Conread position:
               1-284
               

               Cow position:
               chr17:9753186-9752905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 158
               

               Conread position:
               2-232
               

               Cow position:
               chr17:13674103-13674323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               3-230
               

               Cow position:
               chr17:20807864-20807640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               3-262
               

               Cow position:
               chr17:13989868-13990128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 103
               

               Conread position:
               4-284
               

               Cow position:
               chr17:35018739-35018461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               4-284
               

               Cow position:
               chr17:41243511-41243235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               22-275
               

               Cow position:
               chr17:158662-158410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               24-278
               

               Cow position:
               chr17:30413346-30413088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               74-284
               

               Cow position:
               chr17:32407363-32407570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               1-171
               

               Cow position:
               chr18:30846445-30846615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               1-188
               

               Cow position:
               chr18:32859380-32859567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               1-190
               

               Cow position:
               chr18:19683514-19683708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 136
               

               Conread position:
               1-190
               

               Cow position:
               chr18:41156823-41156634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               1-211
               

               Cow position:
               chr18:50359822-50359616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               1-232
               

               Cow position:
               chr18:41208555-41208331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               71, 42
               

               Conread position:
               1-251
               

               Cow position:
               chr18:21767976-21768220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               1-254
               

               Cow position:
               chr18:45400833-45400584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               1-269
               

               Cow position:
               chr18:13025475-13025210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               1-275
               

               Cow position:
               chr18:36649011-36648739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               1-284
               

               Cow position:
               chr18:30231947-30232220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               59, 138
               

               Conread position:
               1-284
               

               Cow position:
               chr18:43129699-43129428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               1-284
               

               Cow position:
               chr18:48300844-48301128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               1-284
               

               Cow position:
               chr18:51309520-51309239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               2-261
               

               Cow position:
               chr18:2439437-2439694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 222
               

               Conread position:
               2-275
               

               Cow position:
               chr18:225811-226065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               7-284
               

               Cow position:
               chr18:19542944-19543217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               59, 108
               

               Conread position:
               10-219
               

               Cow position:
               chr18:25200371-25200157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 177
               

               Conread position:
               21-273
               

               Cow position:
               chr18:36778907-36778661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 187
               

               Conread position:
               80-284
               

               Cow position:
               chr18:2296567-2296766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               121-284
               

               Cow position:
               chr18:35905965-35905807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               1-159
               

               Cow position:
               chr19:19714417-19714252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-261
               

               Cow position:
               chr19:5429183-5429441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 101
               

               Conread position:
               1-282
               

               Cow position:
               chr19:6980746-6981018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               1-282
               

               Cow position:
               chr19:28643458-28643191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               1-282
               

               Cow position:
               chr19:40246627-40246909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 205
               

               Conread position:
               1-284
               

               Cow position:
               chr19:4599638-4599360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               2-220
               

               Cow position:
               chr19:402849-402639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 48
               

               Conread position:
               3-218
               

               Cow position:
               chr19:39943288-39943501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               3-251
               

               Cow position:
               chr19:48218749-48218995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 221
               

               Conread position:
               3-273
               

               Cow position:
               chr19:12057814-12057538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 235
               

               Conread position:
               3-283
               

               Cow position:
               chr19:2260823-2261102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 118
               

               Conread position:
               3-284
               

               Cow position:
               chr19:42580699-42580971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 123
               

               Conread position:
               4-261
               

               Cow position:
               chr19:7608105-7608352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               252, 51
               

               Conread position:
               9-253
               

               Cow position:
               chr19:18951425-18951171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               10-284
               

               Cow position:
               chr19:5890551-5890286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               11-273
               

               Cow position:
               chr19:4990807-4990542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 183
               

               Conread position:
               29-284
               

               Cow position:
               chr19:51775332-51775586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               53-284
               

               Cow position:
               chr19:10063362-10063147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               69-284
               

               Cow position:
               chr19:26804224-26804451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               74, 113
               

               Conread position:
               1-127
               

               Cow position:
               chr2:25385494-25385362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr2:8732556-8732730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               1-171
               

               Cow position:
               chr2:1837448-1837625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               1-218
               

               Cow position:
               chr2:5867250-5867472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               1-219
               

               Cow position:
               chr2:38187903-38188123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 115
               

               Conread position:
               1-225
               

               Cow position:
               chr2:79242152-79242375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               1-228
               

               Cow position:
               chr2:31783257-31783026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 124
               

               Conread position:
               1-228
               

               Cow position:
               chr2:76560665-76560428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr2:4224326-4224551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 87
               

               Conread position:
               1-231
               

               Cow position:
               chr2:35883397-35883633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               55, 203
               

               Conread position:
               1-231
               

               Cow position:
               chr2:46265374-46265138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 204
               

               Conread position:
               1-232
               

               Cow position:
               chr2:50407164-50406937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 64
               

               Conread position:
               1-254
               

               Cow position:
               chr2:26033033-26032782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               1-263
               

               Cow position:
               chr2:1657365-1657108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               71, 185
               

               Conread position:
               1-268
               

               Cow position:
               chr2:16872134-16871876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               1-270
               

               Cow position:
               chr2:80840099-80840369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               49, 235
               

               Conread position:
               1-278
               

               Cow position:
               chr2:12491180-12490910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               1-281
               

               Cow position:
               chr2:30388687-30388422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               1-284
               

               Cow position:
               chr2:11705706-11705430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               1-284
               

               Cow position:
               chr2:16415190-16414903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 192
               

               Conread position:
               1-284
               

               Cow position:
               chr2:20554312-20554585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               1-284
               

               Cow position:
               chr2:40772993-40772702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 234
               

               Conread position:
               1-284
               

               Cow position:
               chr2:43548515-43548790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               1-284
               

               Cow position:
               chr2:64765844-64766131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               2-217
               

               Cow position:
               chr2:78854856-78854649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               190, 52
               

               Conread position:
               2-239
               

               Cow position:
               chr2:30187664-30187909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               2-277
               

               Cow position:
               chr2:26873674-26873408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               208, 48
               

               Conread position:
               2-284
               

               Cow position:
               chr2:287852-288143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               48, 217
               

               Conread position:
               3-166
               

               Cow position:
               chr2:74763785-74763956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr2:5756424-5756239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               44, 110
               

               Conread position:
               3-217
               

               Cow position:
               chr2:46939932-46940147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               3-264
               

               Cow position:
               chr2:14556670-14556928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               3-278
               

               Cow position:
               chr2:1105822-1106089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               3-283
               

               Cow position:
               chr2:65717070-65717351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 233
               

               Conread position:
               3-284
               

               Cow position:
               chr2:62038988-62039254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               4-218
               

               Cow position:
               chr2:39504741-39504960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 170
               

               Conread position:
               4-260
               

               Cow position:
               chr2:45493375-45493635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               4-278
               

               Cow position:
               chr2:77067610-77067340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               4-284
               

               Cow position:
               chr2:445375-445082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 266
               

               Conread position:
               10-280
               

               Cow position:
               chr2:46272161-46272432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               20-278
               

               Cow position:
               chr2:52654005-52653748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               24-284
               

               Cow position:
               chr2:39116847-39116580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 178
               

               Conread position:
               24-284
               

               Cow position:
               chr2:78645141-78645390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               38-282
               

               Cow position:
               chr2:33091305-33091060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               42-284
               

               Cow position:
               chr2:15734028-15733784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 117
               

               Conread position:
               43-282
               

               Cow position:
               chr2:294967-295206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 184
               

               Conread position:
               58-284
               

               Cow position:
               chr2:46452789-46453010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               70-284
               

               Cow position:
               chr2:5299744-5299532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               67, 109
               

               Conread position:
               73-263
               

               Cow position:
               chr2:46256487-46256310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               74-284
               

               Cow position:
               chr2:17826675-17826476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               142-284
               

               Cow position:
               chr2:8346250-8346385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr20:10760134-10760293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-270
               

               Cow position:
               chr20:20360611-20360873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               1-273
               

               Cow position:
               chr20:12837343-12837600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               140, 43
               

               Conread position:
               1-278
               

               Cow position:
               chr20:39630020-39630293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               1-284
               

               Cow position:
               chr20:8099362-8099093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               1-284
               

               Cow position:
               chr20:9997127-9996841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 234
               

               Conread position:
               2-262
               

               Cow position:
               chr20:28822631-28822892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               2-284
               

               Cow position:
               chr20:1744881-1744594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 218
               

               Conread position:
               3-284
               

               Cow position:
               chr20:38654281-38654553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               4-227
               

               Cow position:
               chr20:14760366-14760593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               4-275
               

               Cow position:
               chr20:5795355-5795091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               114, 42
               

               Conread position:
               10-278
               

               Cow position:
               chr20:19261011-19261275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               29-282
               

               Cow position:
               chr20:18970490-18970241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 43
               

               Conread position:
               43-284
               

               Cow position:
               chr20:11635456-11635696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 183
               

               Conread position:
               43-284
               

               Cow position:
               chr20:33295406-33295643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               73-284
               

               Cow position:
               chr20:8834214-8834415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               78-284
               

               Cow position:
               chr20:20214422-20214221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               99-276
               

               Cow position:
               chr20:36197590-36197769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 92
               

               Conread position:
               1-129
               

               Cow position:
               chr21:34734540-34734407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr21:28625417-28625263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr21:9201557-9201367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr21:44262881-44262671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 56
               

               Conread position:
               1-220
               

               Cow position:
               chr21:9851700-9851475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 209
               

               Conread position:
               1-231
               

               Cow position:
               chr21:32534513-32534286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               1-233
               

               Cow position:
               chr21:4939867-4939634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 95
               

               Conread position:
               1-277
               

               Cow position:
               chr21:25291373-25291102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               1-284
               

               Cow position:
               chr21:26852621-26852336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               1-284
               

               Cow position:
               chr21:37613356-37613085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-282
               

               Cow position:
               chr21:32829737-32830005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               138, 48
               

               Conread position:
               3-276
               

               Cow position:
               chr21:23548565-23548839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 136
               

               Conread position:
               3-284
               

               Cow position:
               chr21:648978-649262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               3-284
               

               Cow position:
               chr21:23500976-23501258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 200
               

               Conread position:
               4-219
               

               Cow position:
               chr21:29976213-29976427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               10-156
               

               Cow position:
               chr21:30159377-30159525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               10-169
               

               Cow position:
               chr21:21267548-21267708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               10-190
               

               Cow position:
               chr21:17032038-17031858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 122
               

               Conread position:
               10-277
               

               Cow position:
               chr21:4191986-4191718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               11-275
               

               Cow position:
               chr21:49647284-49647543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               28-284
               

               Cow position:
               chr21:46292055-46291796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 133
               

               Conread position:
               70-280
               

               Cow position:
               chr21:37344023-37344235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 153
               

               Conread position:
               74-284
               

               Cow position:
               chr21:21131054-21131259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               1-219
               

               Cow position:
               chr22:8734004-8734229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 119
               

               Conread position:
               1-220
               

               Cow position:
               chr22:2389867-2390083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 58
               

               Conread position:
               1-220
               

               Cow position:
               chr22:5624115-5624340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr22:46528010-46527776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 144
               

               Conread position:
               1-231
               

               Cow position:
               chr22:45013453-45013681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               1-283
               

               Cow position:
               chr22:7231455-7231171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 132
               

               Conread position:
               1-284
               

               Cow position:
               chr22:11305415-11305128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               1-284
               

               Cow position:
               chr22:22322740-22322454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               38, 178
               

               Conread position:
               1-284
               

               Cow position:
               chr22:26243886-26243617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               3-170
               

               Cow position:
               chr22:581984-582152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               3-278
               

               Cow position:
               chr22:31416970-31416693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 226
               

               Conread position:
               3-284
               

               Cow position:
               chr22:30630319-30630054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               4-219
               

               Cow position:
               chr22:11599774-11599567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               132, 38
               

               Conread position:
               4-232
               

               Cow position:
               chr22:23936252-23936025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 141
               

               Conread position:
               5-270
               

               Cow position:
               chr22:39133385-39133129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               10-284
               

               Cow position:
               chr22:839160-839428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               10-284
               

               Cow position:
               chr22:36357573-36357301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               22-209
               

               Cow position:
               chr22:25942737-25942545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               38-284
               

               Cow position:
               chr22:4226755-4226997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               1-173
               

               Cow position:
               chr23:9215353-9215179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr23:14839669-14839900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               1-231
               

               Cow position:
               chr23:5870887-5871111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               1-262
               

               Cow position:
               chr23:38584435-38584173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 226
               

               Conread position:
               1-265
               

               Cow position:
               chr23:21277116-21277380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               47, 149
               

               Conread position:
               1-276
               

               Cow position:
               chr23:10905397-10905122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 184
               

               Conread position:
               1-284
               

               Cow position:
               chr23:38027437-38027710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               2-175
               

               Cow position:
               chr23:24517407-24517228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               2-284
               

               Cow position:
               chr23:25565512-25565226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               10-284
               

               Cow position:
               chr23:31277006-31276734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               20-282
               

               Cow position:
               chr23:10421371-10421633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               20-283
               

               Cow position:
               chr23:4798688-4798938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               47-284
               

               Cow position:
               chr23:7288082-7288307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               93, 161
               

               Conread position:
               1-228
               

               Cow position:
               chr24:17368315-17368541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               142, 184
               

               Conread position:
               1-251
               

               Cow position:
               chr24:16297591-16297840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               1-269
               

               Cow position:
               chr24:6415776-6415507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 200
               

               Conread position:
               1-271
               

               Cow position:
               chr24:32231232-32231491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-273
               

               Cow position:
               chr24:20507435-20507711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 198
               

               Conread position:
               1-284
               

               Cow position:
               chr24:27761673-27761396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               1-284
               

               Cow position:
               chr24:28336450-28336727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               1-284
               

               Cow position:
               chr24:33575877-33575585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 234
               

               Conread position:
               2-284
               

               Cow position:
               chr24:16600931-16601220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               3-283
               

               Cow position:
               chr24:26846991-26847274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 227
               

               Conread position:
               3-284
               

               Cow position:
               chr24:7466702-7466980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 109
               

               Conread position:
               4-160
               

               Cow position:
               chr24:32301134-32301294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               4-228
               

               Cow position:
               chr24:26792988-26793216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               4-273
               

               Cow position:
               chr24:21888229-21887971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 34
               

               Conread position:
               14-284
               

               Cow position:
               chr24:15935522-15935259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               60, 79
               

               Conread position:
               1-151
               

               Cow position:
               chr25:5568462-5568620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-175
               

               Cow position:
               chr25:17420219-17420399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr25:40141193-40141382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr25:35617179-35616989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               1-225
               

               Cow position:
               chr25:40661200-40660971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               1-232
               

               Cow position:
               chr25:14393782-14394018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 159
               

               Conread position:
               1-284
               

               Cow position:
               chr25:23739927-23740220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 236
               

               Conread position:
               1-284
               

               Cow position:
               chr25:41105218-41105504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               2-157
               

               Cow position:
               chr25:5570766-5570604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-243
               

               Cow position:
               chr25:30526065-30526304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               64, 209
               

               Conread position:
               3-284
               

               Cow position:
               chr25:21070567-21070829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-265
               

               Cow position:
               chr25:11151784-11152050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               4-284
               

               Cow position:
               chr25:34334344-34334618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 123
               

               Conread position:
               7-272
               

               Cow position:
               chr25:18666701-18666437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               48, 166
               

               Conread position:
               19-284
               

               Cow position:
               chr25:14823683-14823954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               20-230
               

               Cow position:
               chr25:34989880-34990088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               40, 123
               

               Conread position:
               21-282
               

               Cow position:
               chr25:11826988-11827243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               124, 76
               

               Conread position:
               24-284
               

               Cow position:
               chr25:14618724-14618989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 168
               

               Conread position:
               24-284
               

               Cow position:
               chr25:23772972-23773223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               70-284
               

               Cow position:
               chr25:35295028-35295235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr26:6988174-6987992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr26:30652810-30653026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               1-218
               

               Cow position:
               chr26:25806988-25806769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               1-227
               

               Cow position:
               chr26:16720042-16719809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr26:18877373-18877141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               1-230
               

               Cow position:
               chr26:4776541-4776780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               1-231
               

               Cow position:
               chr26:387247-387011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-268
               

               Cow position:
               chr26:21012681-21012417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               1-272
               

               Cow position:
               chr26:35148318-35148583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               1-284
               

               Cow position:
               chr26:33949809-33950087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               110, 194
               

               Conread position:
               2-184
               

               Cow position:
               chr26:17330067-17329886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               2-270
               

               Cow position:
               chr26:17288379-17288107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 237
               

               Conread position:
               2-284
               

               Cow position:
               chr26:19536624-19536348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               69, 106
               

               Conread position:
               20-284
               

               Cow position:
               chr26:19013402-19013143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               51, 168
               

               Conread position:
               1-182
               

               Cow position:
               chr27:28924401-28924222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               1-217
               

               Cow position:
               chr27:31268736-31268513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               1-232
               

               Cow position:
               chr27:12261996-12262232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-273
               

               Cow position:
               chr27:31249753-31249489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               73, 130
               

               Conread position:
               1-275
               

               Cow position:
               chr27:1904091-1904368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr27:5423737-5423465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               64, 91
               

               Conread position:
               1-284
               

               Cow position:
               chr27:18954564-18954281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               65, 226
               

               Conread position:
               1-284
               

               Cow position:
               chr27:20865882-20865576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               1-284
               

               Cow position:
               chr27:21102814-21102533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               2-177
               

               Cow position:
               chr27:19963121-19963309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-278
               

               Cow position:
               chr27:25964443-25964716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               10-278
               

               Cow position:
               chr27:8297163-8297431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               69-284
               

               Cow position:
               chr27:17568544-17568338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               1-155
               

               Cow position:
               chr28:34200135-34200285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               142, 41
               

               Conread position:
               1-216
               

               Cow position:
               chr28:34841040-34840827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               1-225
               

               Cow position:
               chr28:4155852-4155623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1-263
               

               Cow position:
               chr28:758218-758481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               1-284
               

               Cow position:
               chr28:14448161-14447881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               1-284
               

               Cow position:
               chr28:20310504-20310220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 226
               

               Conread position:
               1-284
               

               Cow position:
               chr28:22090954-22091239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 225
               

               Conread position:
               2-276
               

               Cow position:
               chr28:30966772-30966495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 149
               

               Conread position:
               2-282
               

               Cow position:
               chr28:15351557-15351837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 225
               

               Conread position:
               2-283
               

               Cow position:
               chr28:13725497-13725218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               2-284
               

               Cow position:
               chr28:22201511-22201237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               58, 94
               

               Conread position:
               2-284
               

               Cow position:
               chr28:23467475-23467199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               51, 155
               

               Conread position:
               3-195
               

               Cow position:
               chr28:17190203-17190011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               3-284
               

               Cow position:
               chr28:9917768-9918053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               4-161
               

               Cow position:
               chr28:32764771-32764613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               10-278
               

               Cow position:
               chr28:3645984-3645728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               11-203
               

               Cow position:
               chr28:23393195-23393385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               129, 52
               

               Conread position:
               60-284
               

               Cow position:
               chr28:1778066-1777847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 127
               

               Conread position:
               1-126
               

               Cow position:
               chr29:34535904-34536031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               1-228
               

               Cow position:
               chr29:735236-735468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 186
               

               Conread position:
               1-263
               

               Cow position:
               chr29:38247447-38247709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               49, 150
               

               Conread position:
               1-281
               

               Cow position:
               chr29:137899-137616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               1-284
               

               Cow position:
               chr29:11526402-11526678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               1-284
               

               Cow position:
               chr29:22949368-22949645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               3-254
               

               Cow position:
               chr29:24778169-24778416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               3-273
               

               Cow position:
               chr29:32913576-32913850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               3-283
               

               Cow position:
               chr29:16319803-16320085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               42, 225
               

               Conread position:
               3-283
               

               Cow position:
               chr29:21546209-21546497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 232
               

               Conread position:
               10-284
               

               Cow position:
               chr29:7330926-7331206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               20-272
               

               Cow position:
               chr29:38485290-38485045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               22-284
               

               Cow position:
               chr29:5635843-5635593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               1-166
               

               Cow position:
               chr3:80582305-80582140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               1-177
               

               Cow position:
               chr3:16897057-16897231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               1-213
               

               Cow position:
               chr3:80929824-80930035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               1-224
               

               Cow position:
               chr3:16635425-16635197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 190
               

               Conread position:
               1-225
               

               Cow position:
               chr3:16883872-16884096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               1-228
               

               Cow position:
               chr3:76136774-76136538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr3:83699455-83699688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 172
               

               Conread position:
               1-231
               

               Cow position:
               chr3:78546813-78547042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               1-245
               

               Cow position:
               chr3:77467157-77466913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 163
               

               Conread position:
               1-253
               

               Cow position:
               chr3:24621962-24621720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               1-263
               

               Cow position:
               chr3:37982913-37983177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 235
               

               Conread position:
               1-264
               

               Cow position:
               chr3:15655866-15656123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               1-278
               

               Cow position:
               chr3:55129803-55129527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 186
               

               Conread position:
               1-284
               

               Cow position:
               chr3:1483475-1483198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               1-284
               

               Cow position:
               chr3:3845526-3845797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               1-284
               

               Cow position:
               chr3:11659907-11659619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 231
               

               Conread position:
               1-284
               

               Cow position:
               chr3:16114858-16114572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               1-284
               

               Cow position:
               chr3:76932450-76932728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               2-184
               

               Cow position:
               chr3:32403387-32403199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-195
               

               Cow position:
               chr3:13495044-13494837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               2-214
               

               Cow position:
               chr3:27299095-27299305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               2-262
               

               Cow position:
               chr3:42500513-42500261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               2-284
               

               Cow position:
               chr3:33469214-33469492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 214
               

               Conread position:
               2-284
               

               Cow position:
               chr3:57594349-57594063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               3-262
               

               Cow position:
               chr3:16868955-16869217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 214
               

               Conread position:
               3-263
               

               Cow position:
               chr3:15747123-15747378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               48, 187
               

               Conread position:
               3-284
               

               Cow position:
               chr3:11961547-11961264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               4-175
               

               Cow position:
               chr3:76354901-76354724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-213
               

               Cow position:
               chr3:51235054-51235267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               4-224
               

               Cow position:
               chr3:72603663-72603431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               4-260
               

               Cow position:
               chr3:8451468-8451723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               4-278
               

               Cow position:
               chr3:9591603-9591879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               4-284
               

               Cow position:
               chr3:11278855-11278582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               10-281
               

               Cow position:
               chr3:21025967-21026238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               10-284
               

               Cow position:
               chr3:43316802-43317082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               40, 221
               

               Conread position:
               10-284
               

               Cow position:
               chr3:58064713-58064979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               38-282
               

               Cow position:
               chr3:77548227-77547989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               70-284
               

               Cow position:
               chr3:3715049-3714840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 146
               

               Conread position:
               74-282
               

               Cow position:
               chr3:21016424-21016628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               1-171
               

               Cow position:
               chr4:38918217-38918394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               1-173
               

               Cow position:
               chr4:61721522-61721695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               1-179
               

               Cow position:
               chr4:36906356-36906178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               1-231
               

               Cow position:
               chr4:17033243-17033479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-271
               

               Cow position:
               chr4:63377052-63376785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               1-273
               

               Cow position:
               chr4:39233434-39233704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               68, 213
               

               Conread position:
               1-274
               

               Cow position:
               chr4:61272333-61272605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               71, 178
               

               Conread position:
               1-282
               

               Cow position:
               chr4:7583475-7583188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               1-284
               

               Cow position:
               chr4:24020866-24021154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               1-284
               

               Cow position:
               chr4:42639045-42639318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               139, 64
               

               Conread position:
               1-284
               

               Cow position:
               chr4:46492196-46491914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 233
               

               Conread position:
               2-278
               

               Cow position:
               chr4:1935262-1935551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               59, 205
               

               Conread position:
               2-284
               

               Cow position:
               chr4:5914580-5914301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 223
               

               Conread position:
               4-264
               

               Cow position:
               chr4:61952754-61952483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               4-275
               

               Cow position:
               chr4:32000815-32000543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 230
               

               Conread position:
               22-218
               

               Cow position:
               chr4:34224637-34224438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               50-284
               

               Cow position:
               chr4:33148490-33148264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               138-284
               

               Cow position:
               chr4:56962094-56961953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr5:57933880-57934043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-175
               

               Cow position:
               chr5:28700579-28700752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               142, 65
               

               Conread position:
               1-188
               

               Cow position:
               chr5:65600583-65600396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               1-210
               

               Cow position:
               chr5:48832736-48832530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               1-219
               

               Cow position:
               chr5:33775426-33775650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 150
               

               Conread position:
               1-226
               

               Cow position:
               chr5:39936456-39936227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr5:17425791-17426025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 133
               

               Conread position:
               1-249
               

               Cow position:
               chr5:28037442-28037201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 49
               

               Conread position:
               1-261
               

               Cow position:
               chr5:49490325-49490075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               1-264
               

               Cow position:
               chr5:49565922-49565663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 142
               

               Conread position:
               1-266
               

               Cow position:
               chr5:41953951-41954202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               1-271
               

               Cow position:
               chr5:34285130-34285396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-284
               

               Cow position:
               chr5:40896991-40897278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 230
               

               Conread position:
               1-284
               

               Cow position:
               chr5:48409097-48409369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               1-284
               

               Cow position:
               chr5:54693758-54694033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               2-225
               

               Cow position:
               chr5:64009364-64009590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 184
               

               Conread position:
               2-284
               

               Cow position:
               chr5:51858977-51859245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 44
               

               Conread position:
               2-284
               

               Cow position:
               chr5:59771405-59771122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               3-220
               

               Cow position:
               chr5:7553117-7552900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 128
               

               Conread position:
               3-276
               

               Cow position:
               chr5:23346011-23345746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               3-284
               

               Cow position:
               chr5:28528969-28529246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               4-265
               

               Cow position:
               chr5:10096489-10096748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 54
               

               Conread position:
               4-275
               

               Cow position:
               chr5:23648080-23648346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               4-284
               

               Cow position:
               chr5:41548197-41548471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               5-233
               

               Cow position:
               chr5:15855878-15856111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 106
               

               Conread position:
               5-284
               

               Cow position:
               chr5:62143608-62143888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               46, 180
               

               Conread position:
               7-173
               

               Cow position:
               chr5:25638682-25638850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               9-164
               

               Cow position:
               chr5:21592512-21592351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               10-139
               

               Cow position:
               chr5:50189300-50189167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               10-204
               

               Cow position:
               chr5:72298922-72299122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               11-262
               

               Cow position:
               chr5:18883264-18883509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               11-284
               

               Cow position:
               chr5:50063887-50063619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               32-284
               

               Cow position:
               chr5:4328610-4328362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 184
               

               Conread position:
               35-284
               

               Cow position:
               chr5:34471630-34471866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               1-152
               

               Cow position:
               chr6:4910819-4910668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               1-219
               

               Cow position:
               chr6:32420437-32420221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               1-225
               

               Cow position:
               chr6:40031527-40031304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               1-268
               

               Cow position:
               chr6:58880692-58880432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 98
               

               Conread position:
               1-284
               

               Cow position:
               chr6:30076774-30077071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 199
               

               Conread position:
               1-284
               

               Cow position:
               chr6:38988327-38988608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 152
               

               Conread position:
               2-218
               

               Cow position:
               chr6:40158042-40158268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-228
               

               Cow position:
               chr6:3016607-3016376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               2-276
               

               Cow position:
               chr6:44905883-44905631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               2-282
               

               Cow position:
               chr6:62961392-62961117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               4-150
               

               Cow position:
               chr6:45497041-45497191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 143
               

               Conread position:
               4-284
               

               Cow position:
               chr6:39109874-39110142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               5-269
               

               Cow position:
               chr6:10364770-10365030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               10-270
               

               Cow position:
               chr6:7049479-7049232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 127
               

               Conread position:
               13-278
               

               Cow position:
               chr6:48327692-48327428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               28-282
               

               Cow position:
               chr6:15962461-15962706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               105-284
               

               Cow position:
               chr6:64252496-64252325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               1-159
               

               Cow position:
               chr7:23682041-23682200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr7:56984191-56984380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               1-219
               

               Cow position:
               chr7:31325400-31325617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               1-219
               

               Cow position:
               chr7:35806107-35805891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               1-228
               

               Cow position:
               chr7:19798872-19799107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 206
               

               Conread position:
               1-232
               

               Cow position:
               chr7:23228869-23228643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               1-239
               

               Cow position:
               chr7:29748622-29748384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               1-261
               

               Cow position:
               chr7:10450683-10450938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               139, 57
               

               Conread position:
               1-269
               

               Cow position:
               chr7:40186401-40186669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               1-270
               

               Cow position:
               chr7:44597349-44597616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               1-282
               

               Cow position:
               chr7:36096630-36096345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 229
               

               Conread position:
               1-283
               

               Cow position:
               chr7:55809655-55809371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 200
               

               Conread position:
               1-284
               

               Cow position:
               chr7:30652305-30652019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               2-228
               

               Cow position:
               chr7:57024496-57024724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               2-282
               

               Cow position:
               chr7:69132848-69132573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               3-185
               

               Cow position:
               chr7:57577894-57578076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 172
               

               Conread position:
               3-196
               

               Cow position:
               chr7:20082490-20082680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               3-229
               

               Cow position:
               chr7:67432434-67432199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 136
               

               Conread position:
               3-239
               

               Cow position:
               chr7:64330249-64330017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               3-264
               

               Cow position:
               chr7:36472541-36472281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               3-276
               

               Cow position:
               chr7:6533793-6534082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               3-282
               

               Cow position:
               chr7:20829598-20829325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               4-219
               

               Cow position:
               chr7:3949991-3949776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               4-228
               

               Cow position:
               chr7:49750484-49750253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               4-262
               

               Cow position:
               chr7:31638114-31637853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 136
               

               Conread position:
               4-278
               

               Cow position:
               chr7:26129936-26130213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               48, 160
               

               Conread position:
               4-284
               

               Cow position:
               chr7:12506220-12505943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               28-277
               

               Cow position:
               chr7:31446870-31447122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               39, 201
               

               Conread position:
               29-283
               

               Cow position:
               chr7:6208145-6207894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               31-284
               

               Cow position:
               chr7:66319100-66318852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               85-284
               

               Cow position:
               chr7:42814331-42814139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               96-284
               

               Cow position:
               chr7:59876932-59876749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               1-134
               

               Cow position:
               chr8:28326528-28326662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr8:39073081-39073228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr8:29499725-29499941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               1-225
               

               Cow position:
               chr8:12151097-12150870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               46, 150
               

               Conread position:
               1-251
               

               Cow position:
               chr8:31262013-31261760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 219
               

               Conread position:
               1-262
               

               Cow position:
               chr8:9963277-9963548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               1-267
               

               Cow position:
               chr8:28336236-28336501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 238
               

               Conread position:
               1-282
               

               Cow position:
               chr8:13559031-13558757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               1-283
               

               Cow position:
               chr8:21948482-21948772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 234
               

               Conread position:
               1-284
               

               Cow position:
               chr8:4998726-4998436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 226
               

               Conread position:
               1-284
               

               Cow position:
               chr8:26195894-26196184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 237
               

               Conread position:
               2-284
               

               Cow position:
               chr8:42152383-42152659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               3-278
               

               Cow position:
               chr8:51504613-51504893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               44, 162
               

               Conread position:
               4-218
               

               Cow position:
               chr8:42117120-42116901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               4-224
               

               Cow position:
               chr8:14317964-14318180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               136, 102
               

               Conread position:
               4-270
               

               Cow position:
               chr8:53450815-53450546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 201
               

               Conread position:
               4-282
               

               Cow position:
               chr8:1158601-1158881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 229
               

               Conread position:
               10-239
               

               Cow position:
               chr8:35183270-35183040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               10-262
               

               Cow position:
               chr8:52000097-51999854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               20-188
               

               Cow position:
               chr8:29028760-29028937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               31, 103
               

               Conread position:
               20-284
               

               Cow position:
               chr8:46518530-46518275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               21-225
               

               Cow position:
               chr8:55343310-55343110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               108, 52
               

               Conread position:
               45-275
               

               Cow position:
               chr8:18683713-18683933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               46-283
               

               Cow position:
               chr8:27561440-27561679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 182
               

               Conread position:
               74-281
               

               Cow position:
               chr8:47359067-47359271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 163
               

               Conread position:
               1-134
               

               Cow position:
               chr9:23438119-23437981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr9:56528643-56528462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-213
               

               Cow position:
               chr9:34675988-34676205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               1-228
               

               Cow position:
               chr9:8727763-8727538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               1-231
               

               Cow position:
               chr9:49259081-49259317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 204
               

               Conread position:
               1-233
               

               Cow position:
               chr9:49151203-49151436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               1-262
               

               Cow position:
               chr9:24978266-24978523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               1-265
               

               Cow position:
               chr9:41918478-41918734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 101
               

               Conread position:
               1-269
               

               Cow position:
               chr9:32293633-32293378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               144, 31
               

               Conread position:
               1-275
               

               Cow position:
               chr9:44579799-44580072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 222
               

               Conread position:
               1-278
               

               Cow position:
               chr9:7019879-7019598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               1-284
               

               Cow position:
               chr9:6373213-6373493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 128
               

               Conread position:
               1-284
               

               Cow position:
               chr9:9558701-9558984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 186
               

               Conread position:
               1-284
               

               Cow position:
               chr9:22940974-22940677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 196
               

               Conread position:
               2-143
               

               Cow position:
               chr9:47110654-47110518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-284
               

               Cow position:
               chr9:26124137-26123855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 159
               

               Conread position:
               2-284
               

               Cow position:
               chr9:36088948-36088676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 186
               

               Conread position:
               3-283
               

               Cow position:
               chr9:371803-372096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 228
               

               Conread position:
               3-284
               

               Cow position:
               chr9:4284646-4284366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               3-284
               

               Cow position:
               chr9:5608354-5608625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               4-284
               

               Cow position:
               chr9:23297493-23297767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               13-273
               

               Cow position:
               chr9:9889549-9889285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               14-266
               

               Cow position:
               chr9:24893296-24893531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               57-274
               

               Cow position:
               chr9:11286535-11286751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 167
               

               Conread position:
               75-269
               

               Cow position:
               chr9:55891073-55890883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               92-284
               

               Cow position:
               chr9:15987335-15987147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               1-166
               

               Cow position:
               chrX:40279143-40278976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               1-183
               

               Cow position:
               chrX:24923184-24923003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               1-201
               

               Cow position:
               chrX:12095254-12095457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               1-217
               

               Cow position:
               chrX:40070276-40070499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-225
               

               Cow position:
               chrX:25848135-25847906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 227
               

               Conread position:
               1-231
               

               Cow position:
               chrX:16782614-16782378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-231
               

               Cow position:
               chrX:21662370-21662140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               67, 146
               

               Conread position:
               1-239
               

               Cow position:
               chrX:7096792-7096548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               55, 221
               

               Conread position:
               1-251
               

               Cow position:
               chrX:37364056-37363793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 239
               

               Conread position:
               1-262
               

               Cow position:
               chrX:37795141-37795400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               1-263
               

               Cow position:
               chrX:36840036-36839783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               59, 200
               

               Conread position:
               1-270
               

               Cow position:
               chrX:2300214-2299950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               1-284
               

               Cow position:
               chrX:25282159-25282445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 235
               

               Conread position:
               3-216
               

               Cow position:
               chrX:17265705-17265923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               4-201
               

               Cow position:
               chrX:13537124-13536921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-222
               

               Cow position:
               chrX:41847200-41847423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               4-239
               

               Cow position:
               chrX:19650170-19650406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               5-268
               

               Cow position:
               chrX:23974113-23974371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               47, 174
               

               Conread position:
               11-284
               

               Cow position:
               chrX:20652739-20652466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 219
               

               Conread position:
               21-284
               

               Cow position:
               chrX:17158806-17159066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               89-282
               

               Cow position:
               chrX:19211849-19212038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               123-284
               

               Cow position:
               chrX:6284788-6284945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 39
Conread position:	1-148
Cow position:	chr1:85400543-85400699 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	119
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	45, 0
Conread position:	1-158
Cow position:	chr1:3018352-3018507 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	116
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	142, 57
Conread position:	1-188
Cow position:	chr1:64972982-64972801 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	146
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	38, 54
Conread position:	1-209
Cow position:	chr1:33442615-33442833 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	166
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	30, 105
Conread position:	1-213
Cow position:	chr1:69286836-69287055 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	166
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	48, 130
Conread position:	1-217
Cow position:	chr1:85838414-85838203 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	163
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	139, 43
Conread position:	1-219
Cow position:	chr1:41515492-41515728 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	165
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	51, 21
Conread position:	1-225
Cow position:	chr1:59013822-59014048 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	176
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	52, 11
Conread position:	1-227
Cow position:	chr1:42875085-42875313 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	171
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	50, 148
Conread position:	1-228
Cow position:	chr1:89089962-89090195 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	159
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	55, 0
Conread position:	1-231
Cow position:	chr1:16973548-16973773 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	169
Alignm E-value:	5e-38
Alignm gaps (pig, cow):	58, 0
Conread position:	1-262
Cow position:	chr1:77657114-77656855 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	192
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	122, 31
Conread position:	1-283
Cow position:	chr1:57743667-57743950 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	214
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	35, 21
Conread position:	1-284
Cow position:	chr1:4277223-4276948 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	214
Alignm E-value:	0
Alignm gaps (pig, cow):	46, 74
Conread position:	2-202
Cow position:	chr1:87242138-87241941 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	147
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	48, 30
Conread position:	2-284
Cow position:	chr1:72997543-72997261 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	210
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	55, 193
Conread position:	3-262
Cow position:	chr1:95765811-95766068 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	208
Alignm E-value:	0
Alignm gaps (pig, cow):	69, 29
Conread position:	3-276
Cow position:	chr1:85529850-85530117 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	204
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	54, 180
Conread position:	4-172
Cow position:	chr1:3376482-3376312 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	122
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	48, 0
Conread position:	4-219
Cow position:	chr1:71976942-71976726 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	157
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	131, 27