Cow genome map
| Conread name: | rret10_f24.y1 |
| Conread position: | 4-438 |
| Cow position: | chr1:44257079-44257529 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 64-371 |
| Cow position: | chr1:75125432-75125112 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 238-438 |
| Cow position: | chr1:54373983-54373783 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 275-438 |
| Cow position: | chr10:53792255-53792089 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 51-431 |
| Cow position: | chr11:53446011-53446397 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 71-344 |
| Cow position: | chr11:54568298-54568579 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 75-432 |
| Cow position: | chr11:80635773-80635389 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 71-391 |
| Cow position: | chr13:58217654-58217337 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 260-435 |
| Cow position: | chr16:46617077-46617257 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 71-345 |
| Cow position: | chr19:43286343-43286060 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 260-438 |
| Cow position: | chr19:29630670-29630493 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 50-344 |
| Cow position: | chr2:1315177-1314859 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 94-438 |
| Cow position: | chr2:71743521-71743863 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 260-437 |
| Cow position: | chr2:42217712-42217535 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 110 |
| Conread position: | 77-435 |
| Cow position: | chr20:27405295-27404925 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 79-344 |
| Cow position: | chr22:10386198-10386465 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 266-438 |
| Cow position: | chr22:33402512-33402337 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 142-431 |
| Cow position: | chr25:19424328-19424039 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 204, 90 |
| Conread position: | 52-358 |
| Cow position: | chr26:21691530-21691202 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 124 |
| Conread position: | 260-434 |
| Cow position: | chr26:22537840-22537667 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 268-438 |
| Cow position: | chr26:29013083-29012918 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 71-351 |
| Cow position: | chr27:30788434-30788150 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 56-345 |
| Cow position: | chr28:20908061-20907761 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 57-387 |
| Cow position: | chr3:18102764-18103103 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 71-434 |
| Cow position: | chr3:2295465-2295823 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 144-435 |
| Cow position: | chr3:58171274-58171576 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 57-435 |
| Cow position: | chr4:12136477-12136860 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 76-359 |
| Cow position: | chr4:14061484-14061184 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 255-438 |
| Cow position: | chr4:5135252-5135434 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 75-372 |
| Cow position: | chr5:27201200-27200891 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 268-438 |
| Cow position: | chr7:32777277-32777451 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 129 |
| Conread position: | 48-415 |
| Cow position: | chr9:15084500-15084125 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 132 |
| Conread position: | 260-431 |
| Cow position: | chr9:23820961-23821131 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 260-431 |
| Cow position: | chr9:23852154-23852324 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 260-438 |
| Cow position: | chr9:39199754-39199934 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 266-438 |
| Cow position: | chrX:41524467-41524292 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |