Non-Coding RNA Search

Cow genome map


           Conread name:
           rret16_o9.y1
        

               Conread position:
               216-469
               

               Cow position:
               chr1:83185113-83184867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               217-417
               

               Cow position:
               chr1:98906439-98906636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               187, 15
               

               Conread position:
               218-464
               

               Cow position:
               chr1:53520772-53520531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               237-450
               

               Cow position:
               chr1:76938149-76938364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr1:58439200-58439420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               238-458
               

               Cow position:
               chr1:8532369-8532589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               238-465
               

               Cow position:
               chr1:95017669-95017893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               238-467
               

               Cow position:
               chr1:81180133-81180369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               239-432
               

               Cow position:
               chr1:21678988-21678794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               247-440
               

               Cow position:
               chr1:37332432-37332625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-467
               

               Cow position:
               chr1:67577906-67577693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 167
               

               Conread position:
               247-467
               

               Cow position:
               chr1:82880503-82880287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               41, 192
               

               Conread position:
               249-398
               

               Cow position:
               chr1:100800192-100800042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               249-465
               

               Cow position:
               chr1:55163759-55163543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               249-468
               

               Cow position:
               chr1:34159668-34159450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               260-467
               

               Cow position:
               chr1:63240770-63240568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               210-410
               

               Cow position:
               chr10:63628057-63627846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               210-464
               

               Cow position:
               chr10:59664122-59664379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               213-464
               

               Cow position:
               chr10:35911903-35912159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               220-467
               

               Cow position:
               chr10:14188978-14189216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               222-466
               

               Cow position:
               chr10:46172141-46172382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               229-467
               

               Cow position:
               chr10:24308076-24308309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               236-451
               

               Cow position:
               chr10:14098503-14098716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               237-454
               

               Cow position:
               chr10:1427857-1427639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               237-470
               

               Cow position:
               chr10:15817979-15818210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-450
               

               Cow position:
               chr10:4994742-4994958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               238-467
               

               Cow position:
               chr10:24022467-24022697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               176, 13
               

               Conread position:
               249-450
               

               Cow position:
               chr10:41626414-41626212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               249-463
               

               Cow position:
               chr10:34673705-34673491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               249-464
               

               Cow position:
               chr10:28671016-28671235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr10:53973650-53973438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               254-470
               

               Cow position:
               chr10:1978862-1979091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               261-464
               

               Cow position:
               chr10:35820822-35821023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               203-445
               

               Cow position:
               chr11:49105914-49105667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               213-365
               

               Cow position:
               chr11:36182537-36182381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               237-453
               

               Cow position:
               chr11:2821356-2821141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               237-453
               

               Cow position:
               chr11:81174712-81174495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr11:39115316-39115093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr11:62151059-62151287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               238-455
               

               Cow position:
               chr11:35363316-35363099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr11:36986783-36986562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr11:75480204-75480444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               243-444
               

               Cow position:
               chr11:45282754-45282550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               243-467
               

               Cow position:
               chr11:19890699-19890475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               247-464
               

               Cow position:
               chr11:38870637-38870424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               249-413
               

               Cow position:
               chr11:64638712-64638878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               249-467
               

               Cow position:
               chr11:41577197-41577414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr11:61454723-61454944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-472
               

               Cow position:
               chr11:17321469-17321247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               203-339
               

               Cow position:
               chr12:6410892-6411029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               238-445
               

               Cow position:
               chr12:31228376-31228180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               238-467
               

               Cow position:
               chr12:7108990-7108750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               249-467
               

               Cow position:
               chr12:3160855-3160639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-470
               

               Cow position:
               chr12:38775041-38774809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               258-464
               

               Cow position:
               chr12:17982410-17982206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               193-470
               

               Cow position:
               chr13:1570567-1570844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               86, 148
               

               Conread position:
               217-467
               

               Cow position:
               chr13:1231778-1232025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               224-467
               

               Cow position:
               chr13:20563128-20563367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               236-431
               

               Cow position:
               chr13:890038-889844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 106
               

               Conread position:
               238-467
               

               Cow position:
               chr13:3143386-3143614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               244-408
               

               Cow position:
               chr13:47599519-47599683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               244-467
               

               Cow position:
               chr13:15166973-15167193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               212, 47
               

               Conread position:
               247-467
               

               Cow position:
               chr13:12989999-12990220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               249-391
               

               Cow position:
               chr13:25817668-25817813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-422
               

               Cow position:
               chr13:37981597-37981421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               249-463
               

               Cow position:
               chr13:25531633-25531423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               249-466
               

               Cow position:
               chr13:26098300-26098517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               249-467
               

               Cow position:
               chr13:21155334-21155117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               249-467
               

               Cow position:
               chr13:34941501-34941281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               249-467
               

               Cow position:
               chr13:37484115-37483890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               259-467
               

               Cow position:
               chr13:60974243-60974441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               223-462
               

               Cow position:
               chr14:37156057-37156296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               237-450
               

               Cow position:
               chr14:21284832-21285039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               237-462
               

               Cow position:
               chr14:39778955-39779175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               238-467
               

               Cow position:
               chr14:7558228-7558006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr14:13634503-13634272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr14:16237303-16237073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               238-467
               

               Cow position:
               chr14:19513174-19512954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               238-470
               

               Cow position:
               chr14:21534837-21534609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               244-467
               

               Cow position:
               chr14:35420549-35420326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 106
               

               Conread position:
               247-402
               

               Cow position:
               chr14:34082944-34082790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               249-409
               

               Cow position:
               chr14:37151428-37151264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-465
               

               Cow position:
               chr14:38239791-38240003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               249-467
               

               Cow position:
               chr14:13465045-13464830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               249-467
               

               Cow position:
               chr14:22381342-22381120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr14:44237487-44237266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               208-467
               

               Cow position:
               chr15:22095338-22095590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               218-442
               

               Cow position:
               chr15:47042405-47042171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               224-472
               

               Cow position:
               chr15:45245311-45245069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               244, 8
               

               Conread position:
               237-455
               

               Cow position:
               chr15:5727884-5728106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               237-465
               

               Cow position:
               chr15:34104514-34104742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               237-470
               

               Cow position:
               chr15:25208517-25208285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               249-422
               

               Cow position:
               chr15:36422916-36423084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               249-467
               

               Cow position:
               chr15:10607794-10607574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               216-449
               

               Cow position:
               chr16:5293526-5293285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               224-467
               

               Cow position:
               chr16:8621104-8620862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               231-464
               

               Cow position:
               chr16:19756940-19757174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               232-468
               

               Cow position:
               chr16:46452911-46453150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               237-365
               

               Cow position:
               chr16:5292812-5292683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               237-454
               

               Cow position:
               chr16:40333484-40333699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr16:13989824-13989595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-467
               

               Cow position:
               chr16:15824601-15824825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               237-470
               

               Cow position:
               chr16:33198623-33198859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-375
               

               Cow position:
               chr16:42253732-42253869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               238-467
               

               Cow position:
               chr16:26610474-26610239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 85
               

               Conread position:
               243-429
               

               Cow position:
               chr16:54227890-54228080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 178
               

               Conread position:
               247-467
               

               Cow position:
               chr16:42079010-42079229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               249-455
               

               Cow position:
               chr16:51710298-51710510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 174
               

               Conread position:
               249-467
               

               Cow position:
               chr16:22804752-22804964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr16:25170220-25170002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr16:52855190-52855413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               156, 68
               

               Conread position:
               250-467
               

               Cow position:
               chr16:49141729-49141949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               251-467
               

               Cow position:
               chr16:50516069-50516296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               254-466
               

               Cow position:
               chr16:45731550-45731762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-464
               

               Cow position:
               chr17:38829968-38829737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               237-470
               

               Cow position:
               chr17:21335816-21336050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-389
               

               Cow position:
               chr17:7760581-7760742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               238-467
               

               Cow position:
               chr17:3781926-3781685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr17:11912819-11913050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr17:16117547-16117781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               242-464
               

               Cow position:
               chr17:26532743-26532524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               244-454
               

               Cow position:
               chr17:40771706-40771492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               46, 191
               

               Conread position:
               244-466
               

               Cow position:
               chr17:1026154-1025944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               247-352
               

               Cow position:
               chr17:14848650-14848757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 96
               

               Conread position:
               247-375
               

               Cow position:
               chr17:26818580-26818710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               247-465
               

               Cow position:
               chr17:11101921-11102131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               249-372
               

               Cow position:
               chr17:8079185-8079062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr17:6566342-6566129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr17:18860848-18861068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               37, 79
               

               Conread position:
               249-467
               

               Cow position:
               chr17:21973262-21973481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr17:40802683-40802462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               263-437
               

               Cow position:
               chr17:4606824-4606651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               172, 87
               

               Conread position:
               213-455
               

               Cow position:
               chr18:14815502-14815746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               237-469
               

               Cow position:
               chr18:50082436-50082658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               238-455
               

               Cow position:
               chr18:21752111-21751892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               242-432
               

               Cow position:
               chr18:49665347-49665545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 99
               

               Conread position:
               244-410
               

               Cow position:
               chr18:11831941-11831777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 132
               

               Conread position:
               244-467
               

               Cow position:
               chr18:49161653-49161879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               247-466
               

               Cow position:
               chr18:51393447-51393660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 88
               

               Conread position:
               247-467
               

               Cow position:
               chr18:55552765-55552542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               249-360
               

               Cow position:
               chr18:24834794-24834911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               224-465
               

               Cow position:
               chr19:14573218-14572971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               28, 215
               

               Conread position:
               237-372
               

               Cow position:
               chr19:35741988-35741850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               237-470
               

               Cow position:
               chr19:10786529-10786763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-425
               

               Cow position:
               chr19:46454679-46454491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               238-434
               

               Cow position:
               chr19:8212008-8212211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr19:28014306-28014079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               238-475
               

               Cow position:
               chr19:13755719-13755477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               244-443
               

               Cow position:
               chr19:23832745-23832938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               245-464
               

               Cow position:
               chr19:5656287-5656509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               247-493
               

               Cow position:
               chr19:34620207-34620459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               249-467
               

               Cow position:
               chr19:13267364-13267585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 199
               

               Conread position:
               249-467
               

               Cow position:
               chr19:38842736-38842946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               1-232
               

               Cow position:
               chr2:13654163-13653933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               210-431
               

               Cow position:
               chr2:52344632-52344408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               210-465
               

               Cow position:
               chr2:21416184-21415929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               34, 129
               

               Conread position:
               216-450
               

               Cow position:
               chr2:16513716-16513489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               221-457
               

               Cow position:
               chr2:56846610-56846387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               223-465
               

               Cow position:
               chr2:10655980-10656230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               224-454
               

               Cow position:
               chr2:76861686-76861922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               62, 86
               

               Conread position:
               224-464
               

               Cow position:
               chr2:31499857-31499614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               237-453
               

               Cow position:
               chr2:42226429-42226646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               88, 14
               

               Conread position:
               238-402
               

               Cow position:
               chr2:45784572-45784411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               238-431
               

               Cow position:
               chr2:46227307-46227114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               238-450
               

               Cow position:
               chr2:56102629-56102842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-464
               

               Cow position:
               chr2:39263329-39263103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               141, 13
               

               Conread position:
               238-464
               

               Cow position:
               chr2:55127374-55127600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               238-465
               

               Cow position:
               chr2:59397218-59397447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr2:38273384-38273149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               244-463
               

               Cow position:
               chr2:12950331-12950553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               244-470
               

               Cow position:
               chr2:34643271-34643034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               245-467
               

               Cow position:
               chr2:25282942-25282716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               245-467
               

               Cow position:
               chr2:28637448-28637671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               247-398
               

               Cow position:
               chr2:46202100-46201951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               247-465
               

               Cow position:
               chr2:32243954-32244172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               249-401
               

               Cow position:
               chr2:80242361-80242513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               30, 60
               

               Conread position:
               249-445
               

               Cow position:
               chr2:70895861-70895663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 129
               

               Conread position:
               249-467
               

               Cow position:
               chr2:36077175-36076960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr2:55632606-55632385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr2:39941317-39941102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               217, 112
               

               Conread position:
               226-465
               

               Cow position:
               chr20:18185475-18185233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               226-467
               

               Cow position:
               chr20:4621444-4621689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               231-467
               

               Cow position:
               chr20:38935321-38935556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               237-382
               

               Cow position:
               chr20:13967374-13967522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               238-437
               

               Cow position:
               chr20:17251590-17251393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               238-451
               

               Cow position:
               chr20:27314563-27314342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               238-465
               

               Cow position:
               chr20:34001513-34001735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr20:22959459-22959691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               239-473
               

               Cow position:
               chr20:19313183-19313420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               246-446
               

               Cow position:
               chr20:18392368-18392566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 117
               

               Conread position:
               247-410
               

               Cow position:
               chr20:15761073-15761238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               249-421
               

               Cow position:
               chr20:24521624-24521452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 137
               

               Conread position:
               249-450
               

               Cow position:
               chr20:33144682-33144884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               250-464
               

               Cow position:
               chr20:23850156-23849947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               268-464
               

               Cow position:
               chr20:6017215-6017411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               213-433
               

               Cow position:
               chr21:32237226-32237007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               213-467
               

               Cow position:
               chr21:8985478-8985222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               213-467
               

               Cow position:
               chr21:34391043-34391293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               218-362
               

               Cow position:
               chr21:28626162-28626019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               221-466
               

               Cow position:
               chr21:36909747-36909495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               237-464
               

               Cow position:
               chr21:28029302-28029073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr21:12617044-12616815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               237-467
               

               Cow position:
               chr21:31691383-31691154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               237-469
               

               Cow position:
               chr21:24858216-24857982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-463
               

               Cow position:
               chr21:724988-725212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr21:30626282-30626510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr21:38900678-38900453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               245-455
               

               Cow position:
               chr21:27341699-27341906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               249-402
               

               Cow position:
               chr21:33350636-33350483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 105
               

               Conread position:
               249-437
               

               Cow position:
               chr21:47802366-47802559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               249-453
               

               Cow position:
               chr21:42414209-42414412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               249-455
               

               Cow position:
               chr21:9862731-9862936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               249-467
               

               Cow position:
               chr21:28211090-28210858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               260-467
               

               Cow position:
               chr21:10263923-10263715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               213-465
               

               Cow position:
               chr22:13840999-13840752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               216-465
               

               Cow position:
               chr22:19787823-19788075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               216-467
               

               Cow position:
               chr22:13957793-13958039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               224-467
               

               Cow position:
               chr22:30515102-30514862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               238-401
               

               Cow position:
               chr22:22861075-22861239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               238-414
               

               Cow position:
               chr22:16812326-16812504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr22:25246746-25246516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               244-461
               

               Cow position:
               chr22:44180425-44180213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               246-407
               

               Cow position:
               chr22:17764207-17764042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 159
               

               Conread position:
               247-464
               

               Cow position:
               chr22:27581274-27581058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               247-467
               

               Cow position:
               chr22:41898672-41898888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               249-455
               

               Cow position:
               chr22:14878239-14878033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-464
               

               Cow position:
               chr22:8882851-8882627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               40, 133
               

               Conread position:
               249-467
               

               Cow position:
               chr22:32189012-32189232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               251-467
               

               Cow position:
               chr22:30689456-30689237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               253-467
               

               Cow position:
               chr22:38949094-38949308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               217-388
               

               Cow position:
               chr23:7937677-7937846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               224-410
               

               Cow position:
               chr23:22574205-22574390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               237-467
               

               Cow position:
               chr23:8698286-8698057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               238-467
               

               Cow position:
               chr23:11129076-11128844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               247-463
               

               Cow position:
               chr23:14895970-14896179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               247-465
               

               Cow position:
               chr23:10554178-10554398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               249-452
               

               Cow position:
               chr23:406329-406531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr23:1429962-1430189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               250-464
               

               Cow position:
               chr23:21336658-21336875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               259-470
               

               Cow position:
               chr23:8959418-8959206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               211-402
               

               Cow position:
               chr24:7301294-7301108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               237-409
               

               Cow position:
               chr24:34532940-34532766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               238-467
               

               Cow position:
               chr24:27052679-27052906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               249-419
               

               Cow position:
               chr24:39850073-39850244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               249-431
               

               Cow position:
               chr24:27543670-27543855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               249-437
               

               Cow position:
               chr24:33372356-33372177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-464
               

               Cow position:
               chr24:40055916-40056127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               249-465
               

               Cow position:
               chr24:32370104-32370324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr24:814459-814677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               39, 105
               

               Conread position:
               249-467
               

               Cow position:
               chr24:24002781-24002563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               249-467
               

               Cow position:
               chr24:28721693-28721465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               268-467
               

               Cow position:
               chr24:29360194-29360392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               224-358
               

               Cow position:
               chr25:20348710-20348574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               238-368
               

               Cow position:
               chr25:14117947-14117815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-411
               

               Cow position:
               chr25:21245769-21245943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               238-414
               

               Cow position:
               chr25:17354220-17354039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               238-459
               

               Cow position:
               chr25:16064734-16064515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr25:13325437-13325209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               247-422
               

               Cow position:
               chr25:15694814-15694636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 161
               

               Conread position:
               247-465
               

               Cow position:
               chr25:14224966-14225187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               249-462
               

               Cow position:
               chr25:12204298-12204081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               249-464
               

               Cow position:
               chr25:11436974-11437192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr25:15319748-15319534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               223-464
               

               Cow position:
               chr26:2603720-2603967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 130
               

               Conread position:
               238-450
               

               Cow position:
               chr26:18918214-18918434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               239-462
               

               Cow position:
               chr26:20182617-20182397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               47, 120
               

               Conread position:
               249-405
               

               Cow position:
               chr26:4585363-4585522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               249-459
               

               Cow position:
               chr26:32834799-32835011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               249-470
               

               Cow position:
               chr26:8352805-8352582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               237-453
               

               Cow position:
               chr27:6674356-6674568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-454
               

               Cow position:
               chr27:30582853-30583071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               237-466
               

               Cow position:
               chr27:15454327-15454559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               238-463
               

               Cow position:
               chr27:6292487-6292712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               244-365
               

               Cow position:
               chr27:28518407-28518530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               244-465
               

               Cow position:
               chr27:9436845-9436617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               249-450
               

               Cow position:
               chr27:6074043-6074246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               254-437
               

               Cow position:
               chr27:15342995-15342815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               87, 100
               

               Conread position:
               259-446
               

               Cow position:
               chr27:20635988-20636175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-455
               

               Cow position:
               chr28:661993-661741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               148, 204
               

               Conread position:
               223-467
               

               Cow position:
               chr28:23840073-23839829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               238-401
               

               Cow position:
               chr28:7751455-7751619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr28:10616106-10616335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               247-467
               

               Cow position:
               chr28:29199564-29199343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               249-367
               

               Cow position:
               chr28:8103556-8103674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               249-410
               

               Cow position:
               chr28:3427028-3427189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               249-467
               

               Cow position:
               chr28:9285542-9285748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               249-469
               

               Cow position:
               chr28:4282656-4282879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr28:18591105-18590873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               254-467
               

               Cow position:
               chr28:5792534-5792322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               260-470
               

               Cow position:
               chr28:11451642-11451863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               218-470
               

               Cow position:
               chr29:18748731-18748976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               223-392
               

               Cow position:
               chr29:4328285-4328117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               226-467
               

               Cow position:
               chr29:35281353-35281111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               237-453
               

               Cow position:
               chr29:26615885-26616114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               237-464
               

               Cow position:
               chr29:36216957-36216730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               237-467
               

               Cow position:
               chr29:1325277-1325046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               188, 15
               

               Conread position:
               238-467
               

               Cow position:
               chr29:40096795-40096573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               247-467
               

               Cow position:
               chr29:3704373-3704590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               249-467
               

               Cow position:
               chr29:457218-457438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               259-467
               

               Cow position:
               chr29:45005800-45006008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               226-405
               

               Cow position:
               chr3:210156-209970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               237-464
               

               Cow position:
               chr3:17331586-17331357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               237-468
               

               Cow position:
               chr3:12712105-12712340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-390
               

               Cow position:
               chr3:48900685-48900839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               238-449
               

               Cow position:
               chr3:15661883-15662094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-453
               

               Cow position:
               chr3:14552695-14552480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr3:18887398-18887165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               238-467
               

               Cow position:
               chr3:51033161-51032931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr3:57577511-57577286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               244-466
               

               Cow position:
               chr3:58767091-58766881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               168, 45
               

               Conread position:
               245-431
               

               Cow position:
               chr3:68514739-68514927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               246-408
               

               Cow position:
               chr3:50099304-50099135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               247-467
               

               Cow position:
               chr3:2506672-2506893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               249-400
               

               Cow position:
               chr3:59179212-59179062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               249-411
               

               Cow position:
               chr3:71488512-71488675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               37, 158
               

               Conread position:
               249-467
               

               Cow position:
               chr3:6403104-6402883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               212-463
               

               Cow position:
               chr4:20139659-20139922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               222-466
               

               Cow position:
               chr4:18108645-18108392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               224-466
               

               Cow position:
               chr4:25879241-25879001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               232-442
               

               Cow position:
               chr4:54479346-54479551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               234-463
               

               Cow position:
               chr4:23578777-23578558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               238-414
               

               Cow position:
               chr4:31023274-31023101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-465
               

               Cow position:
               chr4:46708695-46708923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               238-467
               

               Cow position:
               chr4:19421164-19420938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               238-467
               

               Cow position:
               chr4:24119076-24119309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               238-467
               

               Cow position:
               chr4:42673004-42672773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr4:61450602-61450371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 212
               

               Conread position:
               241-467
               

               Cow position:
               chr4:55508585-55508817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               245-469
               

               Cow position:
               chr4:10905632-10905844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               247-441
               

               Cow position:
               chr4:30974161-30973969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               247-455
               

               Cow position:
               chr4:3850377-3850172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               247-464
               

               Cow position:
               chr4:38799370-38799587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               247-467
               

               Cow position:
               chr4:7249744-7249967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               248-431
               

               Cow position:
               chr4:20117025-20117209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               249-375
               

               Cow position:
               chr4:23451273-23451402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr4:11090864-11091078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               249-467
               

               Cow position:
               chr4:38999249-38999035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               252-463
               

               Cow position:
               chr4:45589771-45589981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               81, 55
               

               Conread position:
               203-470
               

               Cow position:
               chr5:16184991-16184724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               216-449
               

               Cow position:
               chr5:41522908-41523137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               218-467
               

               Cow position:
               chr5:39447646-39447900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               71, 22
               

               Conread position:
               218-467
               

               Cow position:
               chr5:55756552-55756803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               7, 147
               

               Conread position:
               224-468
               

               Cow position:
               chr5:37377757-37377502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               234-450
               

               Cow position:
               chr5:28927723-28927945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               237-467
               

               Cow position:
               chr5:30302762-30302533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               238-375
               

               Cow position:
               chr5:4507095-4507234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               238-448
               

               Cow position:
               chr5:42845735-42845946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               249-464
               

               Cow position:
               chr5:19470331-19470545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr5:14314377-14314158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               254-467
               

               Cow position:
               chr5:64844267-64844482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               259-405
               

               Cow position:
               chr5:42671192-42671331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr6:61515304-61515452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               226-467
               

               Cow position:
               chr6:6067783-6068039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               237-448
               

               Cow position:
               chr6:26837508-26837716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               238-431
               

               Cow position:
               chr6:6117669-6117871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr6:1783892-1784116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               44, 123
               

               Conread position:
               249-430
               

               Cow position:
               chr6:12337854-12337671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-433
               

               Cow position:
               chr6:16700129-16699945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               249-451
               

               Cow position:
               chr6:44078391-44078182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               249-464
               

               Cow position:
               chr6:63047446-63047229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 149
               

               Conread position:
               218-467
               

               Cow position:
               chr7:35652179-35652425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               224-445
               

               Cow position:
               chr7:46823564-46823352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               237-465
               

               Cow position:
               chr7:53698032-53698264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               238-406
               

               Cow position:
               chr7:20415422-20415591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               238-465
               

               Cow position:
               chr7:39401837-39401612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               240-356
               

               Cow position:
               chr7:58427976-58427858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               242-467
               

               Cow position:
               chr7:205630-205415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-364
               

               Cow position:
               chr7:10943677-10943798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 62
               

               Conread position:
               247-465
               

               Cow position:
               chr7:47771101-47771320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               249-442
               

               Cow position:
               chr7:28090112-28089917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr7:19267497-19267718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr7:21296450-21296226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               203-467
               

               Cow position:
               chr8:53429659-53429397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               222-466
               

               Cow position:
               chr8:51862117-51861867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               224-467
               

               Cow position:
               chr8:15391290-15391532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               231-466
               

               Cow position:
               chr8:42607414-42607656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               237-375
               

               Cow position:
               chr8:10970679-10970539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               238-408
               

               Cow position:
               chr8:38572428-38572598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               238-451
               

               Cow position:
               chr8:41418455-41418254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               238-463
               

               Cow position:
               chr8:21077446-21077227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 51
               

               Conread position:
               238-465
               

               Cow position:
               chr8:35211304-35211535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               238-467
               

               Cow position:
               chr8:9942677-9942905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               248-450
               

               Cow position:
               chr8:10081769-10081565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               249-402
               

               Cow position:
               chr8:55711234-55711074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-466
               

               Cow position:
               chr8:1999462-1999249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               249-467
               

               Cow position:
               chr8:3704463-3704241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-467
               

               Cow position:
               chr8:4924405-4924183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               250-455
               

               Cow position:
               chr8:58377724-58377930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               259-369
               

               Cow position:
               chr8:37298306-37298197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               260-467
               

               Cow position:
               chr8:23136917-23137123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               216-464
               

               Cow position:
               chr9:53602580-53602826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               219-464
               

               Cow position:
               chr9:20738873-20739122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               237-405
               

               Cow position:
               chr9:38344082-38344253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               237-467
               

               Cow position:
               chr9:20810873-20810647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               238-375
               

               Cow position:
               chr9:5319818-5319957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr9:7409971-7410199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               238-467
               

               Cow position:
               chr9:8534494-8534266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               241-467
               

               Cow position:
               chr9:8868944-8868716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               242-467
               

               Cow position:
               chr9:36623260-36623046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               249-463
               

               Cow position:
               chr9:18008668-18008457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               249-464
               

               Cow position:
               chr9:50080847-50080628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               249-466
               

               Cow position:
               chr9:23027993-23028219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-467
               

               Cow position:
               chr9:28726524-28726311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               260-411
               

               Cow position:
               chr9:45484374-45484525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-420
               

               Cow position:
               chrX:616510-616720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               76, 144
               

               Conread position:
               218-467
               

               Cow position:
               chrX:27446573-27446327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               219-467
               

               Cow position:
               chrX:42086744-42086498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               220-465
               

               Cow position:
               chrX:38963990-38963749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               229-362
               

               Cow position:
               chrX:20151728-20151591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               231-375
               

               Cow position:
               chrX:35413508-35413358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               237-458
               

               Cow position:
               chrX:2523862-2524085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               237-464
               

               Cow position:
               chrX:17794853-17794634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               238-375
               

               Cow position:
               chrX:40647844-40647706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               249-434
               

               Cow position:
               chrX:33639828-33639634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 146
               

               Conread position:
               249-448
               

               Cow position:
               chrX:26625820-26626030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               249-458
               

               Cow position:
               chrX:19690074-19689860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               249-463
               

               Cow position:
               chrX:7382180-7381964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 149
               

               Conread position:
               249-467
               

               Cow position:
               chrX:42470080-42470301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               249-471
               

               Cow position:
               chrX:34502775-34502554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               249-472
               

               Cow position:
               chrX:32747517-32747287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               250-463
               

               Cow position:
               chrX:42247328-42247536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               254-401
               

               Cow position:
               chrX:19015294-19015144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               265-467
               

               Cow position:
               chrX:35409506-35409304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               268-429
               

               Cow position:
               chrX:15545732-15545571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 41
Conread position:	216-469
Cow position:	chr1:83185113-83184867 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	186
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	16, 0
Conread position:	217-417
Cow position:	chr1:98906439-98906636 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	144
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	187, 15
Conread position:	218-464
Cow position:	chr1:53520772-53520531 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	189
Alignm E-value:	6.02558e-44
Alignm gaps (pig, cow):	68, 14
Conread position:	237-450
Cow position:	chr1:76938149-76938364 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	170
Alignm E-value:	0
Alignm gaps (pig, cow):	49, 14
Conread position:	237-467
Cow position:	chr1:58439200-58439420 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	168
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	9, 16
Conread position:	238-458
Cow position:	chr1:8532369-8532589 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	165
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	96, 13
Conread position:	238-465
Cow position:	chr1:95017669-95017893 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	157
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	13, 0
Conread position:	238-467
Cow position:	chr1:81180133-81180369 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	175
Alignm E-value:	9e-38
Alignm gaps (pig, cow):	51, 13
Conread position:	239-432
Cow position:	chr1:21678988-21678794 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	143
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	43, 9
Conread position:	247-440
Cow position:	chr1:37332432-37332625 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	129
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	247-467
Cow position:	chr1:67577906-67577693 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	163
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	35, 167
Conread position:	249-398
Cow position:	chr1:100800192-100800042 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	119
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	33, 50
Conread position:	249-465
Cow position:	chr1:55163759-55163543 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	164
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	37, 105
Conread position:	249-468
Cow position:	chr1:34159668-34159450 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	170
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	37, 61
Conread position:	260-467
Cow position:	chr1:63240770-63240568 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	152
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	93, 0
Conread position:	210-410
Cow position:	chr10:63628057-63627846 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	152
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	76, 41
Conread position:	210-464
Cow position:	chr10:59664122-59664379 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	180
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	36, 43
Conread position:	213-464
Cow position:	chr10:35911903-35912159 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	192
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	33, 11
Conread position:	220-467
Cow position:	chr10:14188978-14189216 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	175
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	66, 23
Conread position:	222-466
Cow position:	chr10:46172141-46172382 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	166
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	62, 147